Calcium signaling in osteoclasts

It has long been known that many bone diseases, including osteoporosis, involve abnormalities in osteoclastic bone resorption. As a result, there has been intense study of the mechanisms that regulate both the differentiation and bone resorbing function of osteoclast cells. Calcium (Ca²⁺) signaling appears to play a critical role in the differentiation and functions of osteoclasts. Cytoplasmic Ca²⁺ oscillations occur during RANKL-mediated osteoclastogenesis. Ca²⁺ oscillations provide a digital Ca²⁺ signal that induces osteoclasts to up-regulate and autoamplify nuclear factor of activated T cells c1 (NFATc1), a Ca²⁺/calcineurin-dependent master regulator of osteoclastogenesis. Here we review previous studies on Ca²⁺ signaling in osteoclasts as well as recent breakthroughs in understanding the basis of RANKL-induced Ca²⁺ oscillations, and we discuss possible molecular players in this specialized Ca²⁺ response that appears pivotal for normal bone function. This article is part of a Special Issue entitled: 11th European Symposium on Calcium.     

Membrane perturbation induced by interfacially adsorbed peptides

The structural and energetic characteristics of the interaction between interfacially adsorbed (partially inserted) alpha-helical, amphipathic peptides and the lipid bilayer substrate are studied using a molecular level theory of lipid chain packing in membranes. The peptides are modeled as "amphipathic cylinders" characterized by a well-defined polar angle. Assuming two-dimensional nematic order of the adsorbed peptides, the membrane perturbation free energy is evaluated using a cell-like model; the peptide axes are parallel to the membrane plane. The elastic and interfacial contributions to the perturbation free energy of the "peptide-dressed" membrane are evaluated as a function of: the peptide penetration depth into the bilayer's hydrophobic core, the membrane thickness, the polar angle, and the lipid/peptide ratio. The structural properties calculated include the shape and extent of the distorted (stretched and bent) lipid chains surrounding the adsorbed peptide, and their orientational (C-H) bond order parameter profiles. The changes in bond order parameters attendant upon peptide adsorption are in good agreement with magnetic resonance measurements. Also consistent with experiment, our model predicts that peptide adsorption results in membrane thinning. Our calculations reveal pronounced, membrane-mediated, attractive interactions between the adsorbed peptides, suggesting a possible mechanism for lateral aggregation of membrane-bound peptides. As a special case of interest, we have also investigated completely hydrophobic peptides, for which we find a strong energetic preference for the transmembrane (inserted) orientation over the horizontal (adsorbed) orientation.     

Calcium signal compartmentalization

Cytosolic calcium signals are produced by suddenly increasing the concentration of free calcium ions (Ca2+). This can occur by opening channels permeable to Ca2+ either in the surface cell membrane or in the membranes of intracellular organelles containing high Ca2+ concentrations. Ca2+ signals can control several different processes, even in the same cell. In pancreatic acinar cells, for example, Ca2+ signals do not only control the normal secretion of digestive enzymes, but can also activate autodigestion and programmed cell death. Recent technical advances have shown that different patterns of Ca2+ signals can be created, in space and time, which allow specific cellular responses to be elicited. The mechanisms responsible for Ca2+ signal compartmentalization are now largely known and will be described on the basis of recent studies of Ca2+ transport pathways and their regulation in pancreatic acinar cells. It turns out that the Ca2+ handling as well as the structural characteristics of the endoplasmic reticulum (ER) and the mitochondria are of particular importance. Using a variety of Ca(2+)-sensitive fluorescent probes placed in different sub-cellular compartments in combination with local uncaging of caged Ca2+, many new insights into Ca2+ signal generation, compartmentalization and termination have recently been obtained.     

Thigmomorphogenesis: Evidence for a translocatable thigmomorphogenetic factor induced by mechanical perturbation of beans (Phaseolus vulgaris)

Mechanical perturbation of bean (Phaseolus vulgaris L.) internodes results in reduced elongation and increased diameter of the internodes (thigmomorphogenesis). Perturbation of a single lower internode results in thigmorphogenesis in that internode and all of those internodes above it, the degree of which depends on the age (size) of the internodes and the frequency of perturbation. Application of ethephon to the internodes mimics mechanical perturbation. Early removal of the shoot tip or the cotyledons does not effect thigmomorphogenesis, indicating that those organs do not exert control over the response. Mechanical perturbation of one plant of a pair grafted together at the first internodes results in thigmomorphogenesis in both plants. This indicates the transport of some factor from the mechanically perturbed donor to the non-treated receiver. Evidence is presented to support the contention that ethylene is not this transportable factor.     

Calcium permeability of synaptosomes induced by alpha-latrotoxin

The paper deals with characteristics of ionic alpha-latrotoxin-induced permeability of rat brain synaptosomes. It has been shown that the addition of alpha-latrotoxin to synaptosomes in the Ca2+-containing media resulted in an extensive and rapid uptake of 45Ca2+ in synaptosomes. alpha -Latrotoxin was not able to enhance the 22Na+ and 86Rb+ uptake or efflux in the Ca2+-containing and Ca2+- and Mg2+-free media. The dye di-O-C3 was used to monitor the membrane potential changes as a consequence of alpha-latrotoxin treatment of synaptosomes. It has been found that alpha-latrotoxin increased synaptosomal fluorescence in the Ca2+-containing media, but failed to induce any increase of fluorescence in Ca2+- and Mg2+-free media. It has been also shown that the calcium uptake induced by alpha-latrotoxin depends on free calcium concentration in synaptosomes. Toxin-induced calcium flows are shown to be of the vector character.     

Calcium bursts induced by nanosecond electric pulses

We report here real-time imaging of calcium bursts in human lymphocytes exposed to nanosecond, megavolt-per-meter pulsed electric fields. Ultra-short (less than 30 ns), high-field (greater than 1 MV/m), electric pulses induce increases in cytosolic calcium concentration and translocation of phosphatidylserine (PS) to the outer layer of the plasma membrane in Jurkat T lymphoblasts. Pulse-induced calcium bursts occur within milliseconds and PS externalization within minutes. Caspase activation and other indicators of apoptosis follow these initial symptoms of nanosecond pulse exposure. Pulse-induced PS translocation is observed even in the presence of caspase inhibitors. Ultra-short, high-field, electroperturbative pulse effects differ substantially from those associated with electroporation, where pulses of a few tens of kilovolts-per-meter lasting a few tens of microseconds open pores in the cytoplasmic membrane. Nanosecond pulsed electric fields, because their duration is less than the plasma membrane charging time, develop voltages across intracellular structures without porating the cell.     

Calcium signal transduction from caveolae

Caveolae are specialized membrane microdomains that are found on the plasma membrane of most cells. Recent studies indicate that a variety of signaling molecules are highly organized in caveolae, where their interactions initiate specific signaling cascades. Molecules enriched in this membrane include G protein-coupled receptors, heterotrimeric GTP binding proteins, IP3 receptor-like protein, Ca2+ ATPase, eNOS, and several PKC isoforms. Direct measurements of calcium changes in endothelial cells suggest that caveolae may be sites that regulate intracellular Ca2+ concentration and Ca2+ dependent signal transduction. This review will focus on the role of caveolae in controlling the spatial and temporal pattern of intracellular Ca2+ signaling.     

GPCR和CaCC信号传导中的钙信号网络

G蛋白偶联受体(G protein-coupled receptor,GPCR)作为最大的一类人膜蛋白受体家族和最重要的药物靶标而倍受关注,其中钙离子在细胞内信号传导级联放大中起了关键的作用。阐述了GPCR和钙激活的氯离子通道蛋白(calcium-activated chloride channel,CaCC)中的钙信号网络与生理功能以及如何干扰阻断该网络,为药物设计和很多疾病的治疗提供了依据。     

A perturbation solution of the mechanical bidomain model

This research focuses on finding analytical solutions to the mechanical bidomain model for cardiac tissue. In particular, a perturbation expansion is used to analyze the equations, with the perturbation parameter being inversely proportional to the spring constant coupling the intracellular and extracellular spaces. The results indicate that the intracellular and extracellular pressures are not equal and that the two spaces can move relative to each other. This calculation is complicated enough to illustrate the implications of the mechanical bidomain model but is nevertheless simple enough to solve analytically. One application of the calculation is to the mechanical behavior of active cardiac tissue surrounding an ischemic region.     

Discrete and reversible vacuole-like dilations induced by osmomechanical perturbation of neurons

In cultured Lymnaea stagnalis neurons, osmolarity increases (upshocks) rapidly elicited large membranous dilations that could be dislodged and pushed around inside the cell with a microprobe. Subsequent osmolarity decreases (downshocks) caused these vacuole-like dilations (VLDs) to disappear. Additional upshock/downshock perturbations resulted in repeated appearance/disappearance (formation/reversal) of VLDs at discrete sites. Confocal microscopy indicated that VLDs formed as invaginations of the substrate-adherent surface of the neuron: extracellular rhodamine-dextran entered VLDs as they formed and was expelled during reversal. Our standard VLD-inducing perturbation was: 2–4 min downshock to distilled water, upshock to normal saline. However, a wide range of other osmotic perturbations (involving osmolarities up to 3.5x normal, perturbations with or without Ca²⁺, replacement of ions by sucrose) were also used. We concluded that mechanical, not chemical, aspects of the osmo-mechanical shocks drove the VLD formation and reversal dynamics and that extracellular Ca²⁺ was not required.Following a standard perturbation, VLDs grew from invisible to their full diameter (>10 m) in just over a minute. Over the next 0.5–3 hr in normal saline, neurons recovered. Recovery eliminated any visible VLDs and was accompanied by cytoplasmic turmoil around the VLDs. Recovery was prevented by cytochalasin B, brefeldin A and N-ethylmaleimide but not by nocodazole. In striking contrast, these drugs did not prevent repeated VLD formation and reversal in response to standard osmo-mechanical perturbations; VLD disappearance during reversal and during recovery are different.The osmo-mechanical changes that elicited VLDs may, in an exaggerated fashion, mimic tension changes in extending and retracting neuntes. In this context we postulate: (a) the trafficking or disposition of membrane between internal stores and plasma membrane is mechano sensitive, (b) normally, this mechanosensitivity provides an on demand system by which neurons can accommodate stretch/release perturbations and control cell shape but, (c) given sudden extreme mechanical stimuli, it yields VLDs. Present address: Biology Department, Washington University, St Louis, MO 63130-4899This work was supported by NSERC of Canada research grants to CEM and to LRM. CR was the recipient of a postdoctoral fellowship from the Ministere francais de la Recherche et de l'Espace. We thank J-M. Trifaro for the use of his image processing equipment.     

Short-term responses of phloem transport to mechanical perturbation

Jaeger, C. H., Goeschl, J. D., Magnuson, C. E., Fares, Y. and Strain, B. R. 1988. Short-term responses of phloem transport to mechanical perturbation. - Physiol. Plant. 72: 588–594.
Phloem transport was monitored using a continuous stream of ¹¹CO₂-labelled air administered to one leaf while gamma detectors measured ¹¹C activity at intervals along the stem. The effect of gentle, non-injurious mechanical perturbation on phloem transport was tested in cotton ( Gossypium hirsutum L. cv. Stoneville 213). Mechanical stimuli such as shaking, localized vibration and gentle massage were applied while the plants were at isotope equilibrium. Localized phloem blockages were observed within 1–2 min of the stimuli. The blockages lasted from 6–55 min and full recovery of transport required 20–175 min. The effect of preconditioning to mechanical perturbation on phloem transport was tested in bush beans ( Phaseolus vulgaris L. cv. Cherokee Bush). Preconditioning of a bean seedling to gentle stem massage resulted in a shorter blockage response and quicker transport recovery period when the seedling was massaged during a ¹¹C tracer experiment compared to a control seedling. These results indicate that measurements of phloem transport on recently disturbed plants will probably show depressed phloem transport velocities. Measurements should be made after at least a 24-h disturbance-free recovery period.     

Thigmotropism and the modulation of tropistic curvature by mechanical perturbation in cucumber hypocotyls

Mechanical perturbation (MP) applied unilaterally to cucumber ( Cucumis sativus L.) hypocotyls induced thigmotropic curvature toward the stimulus. Gravitropic or phototropic curvature of the hypocotyl was inhibited by symmetrical application of MP to both sides of the hypocotyl. When both MP and IAA were unilaterally applied simultaneously to the same side, the hypocotyls always bent toward the MP stimulus, as in thigmotropism alone. Thus, the exogenous IAA did not control the direction of curvature. Aminoethoxyvinyl glycine (AVG) blocked thigmotropism as well as gravitropism and phototropism, but promoted IAA-induced curvature. MP-stimulated ethylene evolution peaked about 4 h after MP, followed by a peak of thigmotropic curvature. For all tropisms more ethylene evolved from the stimulated side than from the other side of the hypocotyls. MP-induced ethylene acting as a growth inhibitor, auxin-transport inhibitor, and/or modulator of tissue sensitivity to auxin, may be involved in thigmotropism and MP-induced inhibition of various tropisms. Ethylene produced as a result of MP was not affected by the removal of cotyledons. This MP-induced ethylene was additive to that of phototropically or gravitropically stimulated ethylene.     

The induction of soluble peroxidase activity in bean leaves by wind-induced mechanical perturbation

The induction of defense-related peroxidase (POD) activity in plants occurs in response to many biotic and abiotic stimuli. This controlled greenhouse study was an attempt to provide insight into the nature of the induction of soluble POD activity by noninjurious wind-induced mechanical perturbation (MP). In a time course study, exposure of common bean (Phaseolus vulgaris) seedlings to daily periods of fan-produced wind induced a significant and sustained increase in soluble POD activity in primary leaves of 7-9-d-old seedlings. In a wind-gradient study, wind-induced MP led to increases in soluble POD activity in leaves that were proportionally related to the wind speed experienced by individual seedlings. Wind-induced MP enhanced soluble POD activity to a degree similar to treatment with 5 mmol/L HgCl(2), a potent oxidizing elicitor of POD activity in plants. However, no further increases in POD activity were induced by HgCl(2) on plants that were preconditioned with wind-induced MP. Finally, short periods of brushing-induced MP enhanced soluble POD activity to the same degree as longer periods of wind-induced MS, suggesting a greater sensitivity to thigmic stimuli than to seismic stimuli in leaves of bean seedlings. This study illustrates the potential importance of wind and other mechanical stimuli as inducers of POD activity and interacting factors in the elicitation of POD activity by other environmental stimuli.     

Endovesicle formation and membrane perturbation induced by polyoxyethyleneglycolalkylethers in human erythrocytes

Polyoxyethyleneglycolalkylether (CmEn, m=12, n=8) can induce a large torocyte-like endovesicle in human erythrocytes. The present study aimed to examine how variations in the molecular structure of CmEn (m=10,12,14,16,18; n=1-10,23) affect the occurrence of torocyte endovesicles. Our results show that torocytes occur most frequently when m=12,14 and n=8,9. At this molecular configuration the detergents induce inward membrane bending (stomatocytic S1-S2 shapes) resulting in the formation of a large membrane invagination. These detergents have a strong membrane perturbing, i.e., haemolytic, effect. Theoretical calculations indicate that a torocyte-shaped inside-out membrane vesicle can be created from a large membrane invagination due to the impact of laterally mobile anisotropic membrane inclusions. Such inclusions may be detergent-membrane component complexes or unanchored integral membrane proteins. It is shown that a nonhomogeneous lateral distribution of anisotropic membrane inclusions may stabilise the torocyte endovesicle shape, characterised by having opposite membranes in the thin central region of the vesicles separated by a certain distance. Tubular, conical or inverted conical isotropic inclusions cannot do so.     

Calcium and signal transduction in plants

Environmental and hormonal signals control diverse physiological processes in plants. The mechanisms by which plant cells perceive and transduce these signals are poorly understood. Understanding biochemical and molecular events involved in signal transduction pathways has become one of the most active areas of plant research. Research during the last 15 years has established that Ca2+ acts as a messenger in transducing external signals. The evidence in support of Ca2+ as a messenger is unequivocal and fulfills all the requirements of a messenger. The role of Ca2+ becomes even more important because it is the only messenger known so far in plants. Since our last review on the Ca2+ messenger system in 1987, there has been tremendous progress in elucidating various aspects of Ca(2+) -signaling pathways in plants. These include demonstration of signal-induced changes in cytosolic Ca2+, calmodulin and calmodulin-like proteins, identification of different Ca2+ channels, characterization of Ca(2+) -dependent protein kinases (CDPKs) both at the biochemical and molecular levels, evidence for the presence of calmodulin-dependent protein kinases, and increased evidence in support of the role of inositol phospholipids in the Ca(2+) -signaling system. Despite the progress in Ca2+ research in plants, it is still in its infancy and much more needs to be done to understand the precise mechanisms by which Ca2+ regulates a wide variety of physiological processes. The purpose of this review is to summarize some of these recent developments in Ca2+ research as it relates to signal transduction in plants.     

基于LINCS-L1000扰动信号通过SAE-XGBoost算法预测药物诱导下的细胞活性

不同细胞在特定化合物作用下具有不同的扰动信号,基于这些扰动信号预测细胞的活性和挖掘隐藏在表型之下的药物敏感性非常重要.文中开发了一种基于LINCS-L1000扰动信号的SAE-XGBoost细胞活性预测算法.通过对LINCS-L1000、Achilles和CTRP三大数据集匹配和筛选,采用堆栈式深度自动编码器对基因信息...     

Membrane aggregation and perturbation induced by antimicrobial peptide of S-thanatin

Thanatin, a 21-residue peptide, is an inducible insect peptide. In our previous study, we have identified a novel thanatin analog of S-thanatin, which exhibited a broad antimicrobial activity against bacteria and fungi with low hemolytic activity. This study was aimed to delineate the antimicrobial mechanism of S-thanatin and identify its interaction with bacterial membranes. In this study, membrane phospholipid was found to be the target for S-thanatin. In the presence of vesicles, S-thanatin interestingly led to the aggregation of anionic vesicles and sonicated bacteria. Adding S-thanatin to Escherichia coli suspension would result in the collapse of membrane and kill bacteria. The sensitivity assay of protoplast elucidated the importance of outer membrane (OM) for S-thanatin’s antimicrobial activity. Compared with other antimicrobial peptide, S-thanatin produced chaotic membrane morphology and cell debris in electron microscopic appearance. These results supported our hypothesis that S-thanatin bound to negatively charged LPS and anionic lipid, impeded membrane respiration, exhausted the intracellular potential, and released periplasmic material, which led to cell death.     

Calcium entry induced by acetylcholine action on snail neurons

A study was made of excitatory and inhibitory responses elicited by acetylcholine (ACh) in neurons of the snail Eobania vermiculata. At resting potential, ACh evoked a depolarizing inward current in some neurons (D-cells) and a hyperpolarizing current in others (H-cells). The currents elicited by ACh were nonlinearly dependent on membrane potential. After either D- or H-cells were equilibrated in chloride-free isotonic calcium, ACh evoked a depolarizing inward current which reversed sign at about -55 mV. These results suggest that ACh causes an influx of Ca2+ in both types of neurons.     

Thigmomorphogenesis: the effect of mechanical perturbation on plants

Thigmomorphogenetic responses occur in many environmental settings. The most pronounced effects are found under conditions of extremely high rates of turbulent wind or water flow. However, it is an ubiquitous phenomenon, since mechanical perturbations are to be encountered under all but the most stringent laboratory conditions. Our present understanding of these phenomena is the result of studies at the ecological, anatomical, physiological, biochemical, biophysical and molecular biological levels.This contribution is dedicated to Art Galston, who gave me (M.J.) the freedom to begin my exploration of thigmophysiology.