Chloroplast DNA phylogeography of Fagus crenata (Fagaceae) in Japan

 CpDNA variation in Japanese beech, Fagus crenata (Fagaceae), was studied in 45 populations distributed throughout the species' range. Two cpDNA regions were sequenced: the non-coding region between the trnL (UAA) 5′exon and trnF (GAA), and the trnK region (including matK). Thirteen distinct cpDNA haplotypes were recognized and each haplotype was found to be geographically structured. Two major clades (I and II+III) were revealed in phylogenetic analyses among the haplotypes using F. sylvatica as an outgroup. The haplotypes of Clade I were distributed mainly along the Japan Sea side of the Japanese Archipelago, while those of Clade II+III occurred chiefly along the Pacific Ocean side. Consequently, the distribution of the two major cpDNA clades suggests that there were two migration routes in the history of F. crenata; one along the Japan Sea and the other along the Pacific Ocean side of the Japanese Islands. Received March 19, 2001 Accepted November 22, 2001     

Intraspecific variation and phylogeographic patterns of Fagus crenata (Fagaceae) mitochondrial DNA

Mitochondrial (mt) DNA variation in Japanese beech, Fagus crenata (Fagaceae), was studied in 17 populations distributed throughout the species' range. Total genomic DNA of samples from single trees representing each of 12 populations were digested with 18 restriction enzymes and hybridized with three probes containing coxI, coxIII, and atpA gene sequences. Thirty-four of the 54 enzyme/probe combinations showed polymorphisms and all the individuals were subsequently analyzed with six combinations of three probes and two enzymes. Restriction fragment length polymorphisms were evident around all three genes, allowing the identification of eight distinct haplotypes. Haplotype diversity within the populations was found to be very low (HS = 0.031), but population differentiation to be much higher (GST = 0.963). The mtDNA variation was strikingly different from allozyme variation (HS = 0.209; GST = 0.039). Gene flow for maternally inherited mtDNA should be restricted to seed dispersal while nuclear gene flow occurs by both seed and pollen dispersal. Therefore, the difference in the variation between mtDNA and allozymes may be largely a result of the much higher rate of gene flow associated with pollen dispersal than with seed dispersal. The mtDNA variation displayed strong geographic structure, which may reflect the species' distribution in the last glacial maximum and subsequent colonization, and probably also reflects intraspecific phylogeography of the species.     

Shoot dynamics and architecture of saplings in Fagus crenata across its geographical range

 Relationships between leaf or shoot size, number, and arrangement in response to light were investigated to test the hypothesis that these characteristics are linked. In order to test this hypothesis, the divergence in allometry and shoot dynamics in saplings of Japanese beech (Fagus crenata) obtained from four populations and having different leaf sizes were examined in a nursery under both full sun and shade conditions. Trees with different leaf sizes also showed large differences in canopy structure, particularly when shade-grown saplings were compared. The final leaf mass distributions of the large-leaf populations were conical or “bottom - heavy”, while those of the small-leaf populations were planar or “top - heavy”. The slope of the allometric relations between leaf mass and shoot and branch mass in small-leaved populations were steeper than those in large-leaf populations. The four populations were classified into two growth types: populations producing a few large leaf and shoot modules corresponded to “stem growth type”, and those producing many small leaf and shoot modules corresponded to “leaf growth type”. These kinds of intra-specific variation in architecture and growth of F. crenata trees may influence the structure and dynamics of forests in accordance with differences in competitive ability or sensitivity to disturbances such as windstorm. Received: 18 March 1997 / Accepted: 21 October 1997     

Model-based analysis of avoidance of ozone stress by stomatal closure in Siebold's beech (Fagus crenata)

Background and Aims

Resistance of plants to ozone stress can be classified as either avoidance or tolerance. Avoidance of ozone stress may be explained by decreased stomatal conductance during ozone exposure because stomata are the principal interface for entry of ozone into plants. In this study, a coupled photosynthesis–stomatal model was modified to test whether the presence of ozone can induce avoidance of ozone stress by stomatal closure.

Methods

The response of Siebold''s beech (Fagus crenata), a representative deciduous tree species, to ozone was studied in a free-air ozone exposure experiment in Japan. Photosynthesis and stomatal conductance were measured under ambient and elevated ozone. An optimization model of stomata involving water, CO₂ and ozone flux was tested using the leaf gas exchange data.

Key Results

The data suggest that there are two phases in the avoidance of ozone stress via stomatal closure for Siebold''s beech: (1) in early summer ozone influx is efficiently limited by a reduction in stomatal conductance, without any clear effect on photosynthetic capacity; and (2) in late summer and autumn the efficiency of ozone stress avoidance was decreased because the decrease in stomatal conductance was small and accompanied by an ozone-induced decline of photosynthetic capacity.

Conclusions

Ozone-induced stomatal closure in Siebold''s beech during early summer reduces ozone influx and allows the maximum photosynthetic capacity to be reached, but is not sufficient in older leaves to protect the photosynthetic system.     

Regeneration of beech (Fagus crenata) after the simultaneous death of undergrowing dwarf bamboo (Sasa kurilensis)

Seedling recruitment and survivorship of beech (Fagus crenata) were studied with special reference to the simultaneous death of undergrowing bamboo (Sasa kurilensis). The survival rate of beech seedlings on the floor whereSasa had withered was much higher than that on the floor whereSasa survived. Damping off caused the largest mortality among beech seedlings. However, the allocation pattern of matter to different parts of the seedlings indicated that their survival was greatly affected by production economy. The dense cover of dwarf bamboo prevented the establishment of beech seedling banks on the forest floor. The interval between the times when simultaneous death ofSasa occur and the length of its recovery period are thus important factors controlling the dynamics of beech forests in Japan.     

Preliminary Studies on the Geographic Distribution of Fagus in China

There are 11 species in Fagus, 5 of them are endemic to China. They are the major trees of deciduous broadleaved forest in Northern temperate region. This paper mainly deals with the relationship between the distribution of 5 species and 5 climatic indices. The results showed that the principal factor controlling the distribution of Fagus was the precipitation in growing season. The climatic change which resulted from Himalayan movement and the changes during pogt-glacial period and human disturbance also affect the contraction of the range of distribution.     

Variations of wood delta(13)C for the past 50 years in declining Siebold's beech (Fagus crenata) forests

Markedly damaged stands have been observed in Siebold's beech (Fagus crenata) forests on the Tanzawa Mountains, Japan, which are located close to densely populated and heavily industrial areas. We measured the delta(13)C records for the past 50 years (1944-1997) in wood cellulose sampled from relatively healthy trees in declining forests on Mt. Hinokiboramaru (1600 m). This may provide information on the history of stresses related to environmental changes, which have caused the decline symptoms. The results showed that, for all of the trees studied, wood delta(13)C has decreased with time. Also, the difference in delta(13)C among trees grew abruptly after the mid-1960s, which almost coincides with the time when the decline symptoms were markedly observed. Some trees with large reduction of wood delta(13)C exhibited the strong decreases in radial growth. This suggests that the reduction of tree growth may have been more greatly influenced by decreasing carboxylation rate than by stomatal limitation. It is unlikely that water stress and SO(2) and O(3) stresses have induced the growth reduction, because those stresses cause increasing wood delta(13)C. This is supported by the facts that wet conditions and relatively low SO(2) and O(3) levels have been observed near Mt. Hinokiboramaru. In addition, analyses of wood Ca showed no evidence that acid fog and soil acidification have affected the wood delta(13)C and growth through effects on the nutrient uptake of trees. However, what type of stresses have induced the large reduction of wood delta(13)C and growth for some of the trees studied remains unknown because of the lack of sufficient data for evaluation. In contrast, lesser reduction of wood delta(13)C from the other trees may be related to an increase in the plant water-use efficiency with increasing atmospheric CO(2) concentration.     

Dispersion pattern and mortality of seeds and seedlings ofFagus crenata Blume in a cool temperate forest in western Japan

The seed and seedling mortality ofFagus crenata Blume after a mast year (1993) was examined in relation to density and distance from the nearest conspecific adult tree in a mixed conifer-hardwood forest in Ohdaigahara, western Japan. The mortality of fallen seeds during winter amounted to 93.7%, and 79.2% of the current-year seedlings died in the first growing season. The most important factor of death for both seeds and seedlings was predation by vertebrates. The mortality of seeds during winter was positively correlated with sound seed density. The mortality of seedlings was positively correlated with density but not significantly related to the distance from the nearest crown edge of a conspecific adult tree. Mortality patterns varied with stages and spatial scales due to the behavior of predators; it is thus important to investigate the spatial pattern of seeds and seedling mortality at various temporal and spatial scales. After the first growing season, the difference in seedling density between distance classes was not significant at <4m from the nearest adult trees due to density-dependent mortality. However, seedling density was significantly lower in the ≥4 m class than in the <4 m classes.     

Regional Differentiation in Genetic Components for the American Beech, Fagus grandifolia Ehrh., in Relation to Geological History and Mode of Reproduction

Fagus grandifolia , were investigated throughout its geographical range, using allozyme polymorphisms. A total of 1,131 trees from 21 populations were examined for 32 alleles of 10 polymorphic and two monomorphic loci in eight enzyme systems. The mean expected heterozygosity was 0.186, which indicates a relatively high genetic diversity within the populations. The levels of population differentiation were high, as revealed by genetic parameters, i.e., G _ST =0.168 and F _ST =0.167. The results of principal component analysis on allele frequencies clearly revealed unique regional patterns of differentiation in genetic components among populations “with” and “without” vegetative regeneration by root suckers. The American beech populations consist of two genetically distinct clusters, one from the Gulf-coastal plain, eastern coastal plain, Piedmont Plateau and Ozark Plateau; and the other from the remaining northern glaciated territories. Populations from the Blue Ridge and Great Smoky Mountains turned out to belong to the latter cluster, which is also characterized by extensive regeneration via root suckers. The consequences of regional differentiation in genetic components are discussed in relation to the postglacial spread from refugia to the current geographic distributions and the mode of reproduction. Received 8 August 2000/ Accepted in revised form 29 May 2001     

Distribution of chloroplast DNA haplotypes in the contact zone of Fagus crenata in the southwest of Kanto District, Japan

We have investigated cpDNA haplotype distribution in 24 populations of Fagus crenata in the southwest of Kanto District, Japan, and clarified the extent of intermixing of haplotypes in the contact zone by additional fine-scale analysis of two areas. Two cpDNA haplotypes belonging to different lineages were detected, and their distribution had geographical structure. Intermixed populations with the two haplotypes were limited to a narrow area. The geographical boundary between the haplotypes extended from Hakone to the west of the Kanto Mountains through the northern foot of Mt Fuji. No relationship was observed between the boundary location and the current topography of the southwest of Kanto District.     

北温带水青冈属的间断分布及其泛生物地理学解释

水青冈属(Fagus L.)在北温带呈间断分布, 已发现的丰富的第三纪化石为讨论其起源和演化提供了证据。该文采用泛生物地理学的轨迹分析方法对水青冈属的分布进行了研究, 试图分析水青冈属的分布格局, 进而讨论其进化问题。结果表明, 水青冈属在中国、日本、北美、欧洲的分布是完全间断的, 没有一个共有轨迹连接它们, 即使在毗邻的、且有植物亲缘关系的中国和日本, 也没有一个共有轨迹连接。完全间断的轨迹对分析水青冈属的起源、演化和扩散学说, 没有提供任何信息。仅有两条共有轨迹分别分布在中国东南部和日本, 分别代表了中国4种和日本3种水青冈属种类的连接, 说明水青冈属经历了漫长的历史演化, 扩散能力是有局限性的, 仅在分化和多样性中心进行了一些分化和演化, 整个属并未进行长距离的扩散, 或者长距离扩散早已销声匿迹了, 现代的分布格局完全是以间断为最主要特征的。间断分布的动力解释为古地中海西撤、青藏高原隆起、东亚季风活动等地质历史事件, 第三纪以来特别是第四纪冰期活动等气候波动, 以及水青冈属植物的生物学特性(特别是喜温喜湿)。     

Differences in beech (Fagus crenata) regeneration between two types of Japanese beech forest and along a snow gradient

Differences in beech (Fagus crenata) regeneration were quantitatively investigated using power function analysis for the size–class (diameter at breast height, DBH) distribution and juvenile-to-canopy tree (J/C) ratio along a snow gradient throughout Japan. In snowy areas, all species combined, as well as F. crenata alone, showed constant regeneration, with parameter b≈−1.6 for the power function y=ax ^b (x=DBH, y=density), which is related to the DBH–class distribution. The good fit of the data to the function suggests that beech regenerates constantly with self-thinning patch dynamics. Parameter a, which indicates the abundance of small trunks, was high. Furthermore, the mean J/C ratio was ≈8, i.e., each parent beech tree produced eight juveniles. These results suggest that beech regenerates constantly with gap dynamics in snowy beech forests on the Japan Sea side of Japan (snowy). However, the fit of F. crenata was lower and nonsignificant in some forests in less snowy areas, despite the high fit of all species combined. In these areas, the mean of a was low, and b was often near zero for F. crenata regressions. These results suggest that the abundance of beech was low, and self-thinning was not evident because of the initial low abundance. Moreover, the mean J/C ratio was <1.0, suggesting that juvenile density was lower than that of canopy trees. Thus, the regeneration of F. crenata on the Pacific Ocean side of Japan (less snowy) is rather sporadic. Less snowy conditions may promote seed desiccation, predation of beechnuts and seedlings, and water stress. Lower F. crenata density may also reduce predator satiation and wind pollination.     

Altitudinal and seasonal variation of frost resistance of Fagus crenata and Betula ermanii along the Pacific slope of Mt. Fuji, Japan

1 Frost resistance of Fagus crenata (Siebold's beech) and Betula ermanii (Japanese mountain birch) was investigated with respect to the species' altitudinal distribution on the Pacific slope of Mt. Fuji from 1996 to 1997. Flint's Index of Injury, which is based on electrolyte leakage from freeze-injured tissue, was used to assess frost hardiness of shoots produced in the previous growing season.
2 Fagus crenata is found on the lower slopes (700–1600 m a.s.l.). Mid- to late November hardening of shoots was enhanced, midwinter damage below −30 °C reduced and dehardening delayed nearer the upper limit. To here temperatures began to rise at least 3 weeks before dehardening began. Shade crown shoots were more susceptible to deep-freeze damage than light crown shoots. If the ultimate upper distribution limit was determined by frost hardiness, F. crenata would be expected to occur up to 1800 m altitude.
3 Betula ermanii is found between 1600 m and 2800 m, and intensive hardening occurred at all altitudes during the second half of October. Frost hardiness increased considerably with altitude up to the forest limit, where frost acclimation preceded the temperature decline by 2 weeks. Once maximum frost resistance had been attained freezing to −47 °C failed to cause tissue injury. Dehardening began slightly later at the tree line, but the time–course was the same at all altitudes. Main and lateral shoots did not differ in frost hardiness.
4 Comparison of monthly air temperature minima over the past 66 years with the course of frost resistance showed that F. crenata and B. ermanii found on the Pacific slope of Mt. Fuji were unlikely to suffer damage by frost.
5 The observed uppermost distribution limit for B. ermanii at 2800 m altitude on Mt. Fuji is considered both with our observations and with previous hypotheses.     

Geographical distribution of the black howler (Alouatta pigra) in Central America

The geographic range of the black howler,Alouatta pigra in Mexico, Guatemala, and Belize was investigated by travelling through and visiting 65 locations within or close to the expected range. The existence of the species was noted through first hand observations or was documented by talking with residents and knowledgeable people in the area. Observations were made on captive animals as well. All sites and probable sites ofA. pigra were noted to be under 1,300 ft in altitude and in areas with a mean annual temperature above 25°C and a mean annual rainfall over 1,000 mm per year. This area coincides with tropical rain forest areas, including both tropical evergreen and semievergreen rain forests.A. pigra was most plentiful in riverine areas which showed flooding for some part of the year. Two areas of possible sympatry withA. palliata were noted. In all cases, the troop sizes ofA. pigra were extremely small, under ten individuals, and infants could easily be sexed, in contrast toA. palliata which is known to occur in troops of 15–18 and is difficult to sex at an early age. Finally, a very gross method for population estimation from searching time emerged from the study.     

Internal transcribed spacer haplotype diversity and their geographical distribution in Dasyscyphella longistipitata (Hyaloscyphaceae, Helotiales) occurring on Fagus crenata cupules in Japan

Phylogeographic analysis of Dasyscyphella longistipitata (Hyaloscyphaceae, Helotiales), which occurs on decaying Fagus crenata cupules, was carried out. The ITS-5.8S regions of the 120 isolates from 12 sites in areas across Japan revealed 38 haplotypes, the majority of which comprised the haplotype designated H12 (42.5%). H12 was found in isolates from all sites, followed by H28 and H10, which were detected in isolates from 10 and 7 sites, respectively. Thirty-two haplotypes were obtained in single isolates. In the haplotype network, H12 was the root, and it formed interior clades with H28 and H10. Genetic diversity was higher in northern and southern Japan, but genetic distance was not correlated with geographical distance, nor with the phylogenetic clades of F. crenata. Therefore, it was concluded that D. longistipitata forms a genetic continuum that covers all of the areas in which it is distributed in Japan, with variations being generated in local populations from the major haplotypes.     

Structure of primary Japanese beech (Fagus japonica maxim.) forests in the Chichibu Mountains,central Japan,with special reference to regeneration processes

The floristic composition, structure and dynamics of three primaryFagus japonica stands were investigated in the Chichibu Mountains.F. japonica was dominant [RD(%): 64.9–87.0] and showed a slightly inverse J-shaped DBH class distribution in the quadrats [No. of canopy stems (H>20m): 87–138/ha]. The stems ofF. japonica for each size were distributed in the form of colonies, being scattered almost uniformly, and arranged in positive association with each other. Detailed examination of the bases of the stem groups forming colonies revealed that most of them originated from the bases of dead mother stems and that they were from common stools [No. of large stems (H>10 m) per stool: 6–11]. Among six major canopy gaps observed, only one included stems sprouting from the outer part ofF. japonica stools, while all the others were occupied by individuals of species other thanF. japonica. After tree-fall, several undercanopyF. japonica stems remained. Thus canopy gaps in these forest stands recovered through the sprouting of remainingF. japonica stools or by new sprouting ofF. japonica individuals adjacent to the gaps. However, it was considered difficult to fill canopy gaps only with sprouts when the distance between the center of a gap and that of a stool surpasses the crown vector. Such places that are not fully occupied by sprouts will be filled by individuals of other canopy and/or under-canopy species.