The characterization of actin associated with postsynaptic membranes from Torpedocalifornica

SDS-polyacrylamide gel electrophoresis of acetylcholine receptor from $\text{Torpedo}\text{californica}$ electroplax membrane fragments shows, in addition to the four receptor subunits of 40,000, 50,000, 60,000 and 65,000 daltons, other components of apparent molecular weights 43,000, 47,000 and 90,000 daltons. In this study deoxyribonuclease I inhibitory activity has been used to identify actin in $\text{Torpedo}\text{californica}$ receptor-enriched membranes and affinity chromatography on a deoxyribonuclease I agarose column has been used to purify this protein from the membrane preparations. In addition the membrane protein components have been analyzed by electrophoresis on a series of SDS-polyacrylamide gels of varying acrylamide concentrations. Evidence is presented that actin is a component of most preparations of receptor-enriched membrane fragments, having an apparent molecular weight of 47,000 daltons, and is distinct from the 43,000 dalton protein.     

The collagen of chick embryonic notochord

Notochords, isolated from 2 $\text{1}\text{2}$ day chick embryos, were cultured in the presence of ³H proline and the labeled proteins co-purified with chick skin carrier collagen. The purified material, most of which eluted from CM-cellulose as a single peak in the region of the carrier collagen α1 chain, contained 41% of the incorporated proline as hydroxyproline and from gel filtration measurements had a molecular weight of approximately 100,000 daltons. When the material was chromatographed on DEAE-cellulose with carrier α1 chains from both skin [α1 (I)] and cartilage [α1 (II)], it eluted predominantly with the cartilage chains.     

Crosslinkage of salt-soluble elastin in vitro.

Radioactively labeled soluble elastin, synthesized $\text{in vitro}$ by viable copper-deficient pig aorta in a culture medium containing L-[4,5-³H] lysine, was incubated with normal newborn pig aorta. The insoluble residue, after extraction of the aorta with cold 0.5M NaCl at pH 7.4, was reduced with NaBH₄. Insoluble elastin, prepared from this by autoclaving after extraction with guanidine, was hydrolyzed with HCl and the hydrolysate was chromatographed on Aminex A-5. Among the radioactive residues eluted in the basic region, four elastin crosslinks (isodesmosine, desmosine, lysinonorleucine and merodesmosine) were identified by comparison with known standards on the Beckman amino acid analyzer. This provides the first direct evidence that soluble elastin is a precursor of insoluble elastin.     

Prokaryotic metallothionein: preliminary characterization of a blue-green alga heavy metal-binding protein.

A cadmium inducible metal-binding protein has been isolated from cadmium exposed $\text{Synechococcus}\text{sp.}$ blue-green algae. Amino acid analysis indicated a high half-cystine concentration and an apparent minimum molecular weight of 8100. The isoelectric point was determined to be 4.3. Together with electrochemical characteristics these findings constitute the first conclusive evidence for the existence of metallothionein in a prokaryotic organism.     

The identification of MYO-inositol:NAD(P)+ oxidoreductase in mammalian brain.

$\text{myo}$-Inositol:NAD(P)⁺ oxidoreductase ($\text{myo}$-inositol oxidoreductase) has been identified in bovine brain. This enzyme elutes from DEAE cellulose with 0.3 M KCl in 50 mM Tris buffer, pH 7.5. Using NADH as cofactor $\text{myo}$-inosose-2 is reduced selectively to $\text{myo}$-inositol. With NADPH the enzyme forms both $\text{myo}$-inositol and $\text{scyllo}$-inositol, however, at a lower rate. The enzyme was chromatographed on G-100 Sephadex and found to have an apparent molecular weight of 74,000. This enzyme differs in DEAE binding, molecular weight and cofactor specificity from the previously described $\text{scyllo}$-inositol oxidoreductase which utilizes NADPH exclusively to produce 3 fold more $\text{scyllo}$-inositol than $\text{myo}$-inositol.     

Selenium binding proteins in rat tissues

The 100,000 × g extracts of rat intestine and colon were incubated $\text{in}\text{vitro}$ with Na₂[⁷⁵Se]O₃. Chromatography of this material on a Sephadex G-100 column produced three radioactive peaks corresponding to molecular weights of 17,000, 68,000 and > 90,000. The 17,000 peak corresponded to a protein which sedimented in the 2S region of a 5–20% ($\text{w}\text{v}$) linear sucrose density gradient. Selenium binding to this protein was specific, stable and sensitive to thiol inhibitors such as p-chloromercuriphenylsulfonic acid (1 mM) and iodoacetamide (2 mM). Chromatography of rat serum - [⁷⁵Se] complex on Sephadex G-100 yielded only two radioactive peaks that corresponded to molecular weights of 68,000 and > 90,000. The 2S selenium binding protein of intestine and colon may mediate the biological functions of selenium in those tissues.     

Prolonged lifetime of the 410-nm intermediate of bacteriorhodopsin in the presence of guanidine hydrochloride.

Prostatic binding protein (PBP) is a quantitatively important steroid-binding protein present in rat ventral prostate. Electrophoresis on SDS-containing polyacrylamide gels shows that PBP is composed of two subunits, F and S having molecular weights of 16,000 and 18,000. Upon reduction these subunits dissociate further into smaller components. Translation of mRNA from rat ventral prostate in a wheat germ cell-free system or in $\text{Xenopus}$ oocytes results in the formation of polypeptides immunoprecipitable with an anti-PBP antiserum. However, as opposed to the wheat germ system, only the oocytes synthesize polypeptides, that are electrophoretically identical to those of native cytosolic PBP.     

A new serum lipoprotein found in many rhesus monkeys.

A new serum lipoprotein was found in about 10 out of 30 rhesus monkeys ($\text{Macaca}\text{mulatta}$) which contained 28% by weight of protein, 42% total cholesterol, 22% phospholipid, and 8% triglyceride. This is in contrast to LDL (which the ten monkeys also contained) which had 24% protein, 46% total cholesterol, 24% phospholipid and 7% triglyceride. An S_{f, 1.063} in KBr of 3.0 to 3.7 and molecular weight of 3.5 – 3.7 million were observed compared to means of 8.1 and 3.0 million for normal rhesus LDL. The lower S_f was caused by its higher density. This new lipoprotein was most easily demonstrated and isolated by preparative ultracentrifugation of all serum lipoproteins at density 1.22 g/ml, followed by 6% agarose gel filtration at 6°. The new lipoprotein appeared as a distinct peak eluting before LDL.     

Nuclear 115cadmium: uptake and disappearance correlated with cadmium-binding protein synthesis.

The intracellular distribution of ¹¹⁵cadmium was determined following a pulsed exposure to the metal. The uptake and disappearance of label from rat liver nuclei was correlated with the appearance of a cytoplasmic Cd-binding protein. By coupling $\text{in}\text{vivo}$ - $\text{in}\text{vitro}$ experiments it was shown that unspecifically bound cadmium is free to enter the nucleus while specifically bound cadmium remains in the cytoplasm.     

Interactions of cadmium and zinc in cultured rat embryos

Rat embryos were cultured in serum taken from animals dosed with cadmium, or serum with cadmium added $\text{in}$$\text{vitro}$ in the presence or absence of additional zinc. Embryos explanted at day ten and grown in serum taken from animals sooner than 4 h after dosing had a reduced DNA content after 24 h culture. In one-hour serum, the yolk sac had become thick and brittle. Zinc ameliorated the effects but had no stimulatory effect on post eight-hour serum when serum zinc levels were at their lowest. The hypothesis that cadmium induces a maternal zinc deficiency sufficient to cause teratogenic changes could not be sustained. Embryos explanted at nine days were much more susceptible to cadmium added $\text{in}$$\text{vitro}$ than ten-day embryos. The principal anomaly, apart from a reduced DNA content, was a thickening of the yolk sac similar to that seen in embryos grown in serum taken from animals one hour after cadmium dosing. Addition of zinc to the medium prevented both of these effects. The suggestion is made that the cadmium-induced dysgenesis of the yolk sac precludes appropriate embryonic nutrition.     

The heterogeneity of rat high density lipoproteins.

Ubiquitin was first found in nuclei in protein A24 where its carboxyl terminal is covalently bound to histone 2A by an isopeptide linkage (Goldknopf, I. L. and Busch, H. (1977) Proc. Natl. Acad. Sci. USA $\text{74}$, 864–868). Two-dimensional polyacrylamide gel electrophoresis of the 0.4 N H₂SO₄ soluble proteins from fractionated rat liver chromatin showed that protein A24 and histones H1, H2A, H2B, H3 and H4 were present in fractions P1 and P2 and markedly diminished in relative amounts in fraction S2. Conversely, a spot designated Ub was found in fraction S2 along with an increased amount and number of non-histone proteins. The Ub spot was not found in chromatin fractions P1 and P2. Ub was identified as ubiquitin by migration on two-dimensional gels and after purification by preparative polyacrylamide gel electrophoresis by its methionine NH₂-terminal amino acid and its amino acid composition.     

The use of agar for gel electrophoresis of DNA

Agar can be used instead of agarose for electrophoresis of DNA. DNA restriction fragments migrate in proportion to the log of their molecular weights in the ranges studied. Bands of both restriction fragments and discrete small low molecular weight DNAs such as plasmids are sharp and clearly visible. The DNA can be Southern blotted with very low nonspecific background binding of radioactivity. Fragments can be removed from the gel and can be further restricted and ligated. Plasmid DNA retains its capacity to transform host bacterial cells. Agar is about $\text{1}\text{10}$ the cost of electrophoresis-grade agarose.     

Purification of tryptophan oxygenase and its interaction with cadmium

Purification of tryptophan oxygenase (L-tryptophan oxidoreductase EC 1.13.1.12) from $\text{Pseudomonos acidovorans}$ is described. When chromatographed on Sephadex G-200 or on DEAE Sephadex A-50, the enzyme was eluted in two distinct bands. Over the concentration range 10^?6 – 10^?4 M, cadmium stimulated the activity of the enzyme but inhibited it non-competitively at higher concentrations. A mechanism is suggested for the behaviour of the enzyme towards cadmium.     

Absence of ferric enterobactin receptor modification activity in mutants of Escherichia coli K-12 lacking protein a.

The modification activity for the ferric enterobactin receptor in the Triton X-100 solubilized outer membrane of $\text{Escherichia}\text{coli}$ K-12 was adsorbed to a column of $\text{p}$-aminobenzamidine-//-sepharose and eluted with free benzamidine. Recombination of the dialyzed eluate with the filtrate from the column reinstituted conversion of the receptor from 81K to 81K¹, the latter exhibiting an apparent molecular weight of 74,000 daltons in sodium dodecyl sulfate polyacrylamide gel analysis. The eluate from the $\text{p}$-aminobenzamidine column was shown to contain a component, coincident on gels with both protein and modification activity, which by mutational and other analyses appears to be identical with protein $\text{a}$ of the outer membrane.     

Chemotactic migration of neutrophils under agarose.

A simple test for neutrophil chemotaxis is described. Wells were cut in soft agarose gel and filled with human peripheral blood leukocytes, chemotactin and control substances. Neutrophils consistently migrated under agarose towards the well with chemotactin, but not towards wells with control substances. Chemotaxis was quantitated as the mean distance travelled by 10 cells farthest from the well of origin, at specified time-intervals after filling the wells. Approximately $\text{1}\text{3}$ distance was covered in 2 hours, $\text{3}\text{4}$ in 4 hours and 90 per cent in 6 hours. The migrating cells examined after fixation and staining were found to be predominantly neutrophils with occasional eosinophils and monocytes.     

An acetylcholine receptor preparation lacking the 42,000 Dalton component.

Acetylcholine receptor has been purified from $\text{Electrophorus}$ in the presence of the serine protease inhibitor phenylmethyl sulfonyl flouride. The purified material has a specific toxin-binding capacity of 3.6 nmoles of toxin per mg of protein. Electrophoresis of reduced, dissociated receptor on acrylamide gels containing sodium dodecyl sulfate reveals components of 110,000, 60,000, 54,000, and 48,000 daltons. No component with an apparent molecular weight of less than 48,000 daltons is seen. Limited digestion of this preparation with trypsin results in the appearance of components of 44,000 and 42,000 daltons. Prolonged digestion with trypsin generates species with apparent molecular weights of less than 42,000 and has no effect on the specific protectable toxin-binding capacity of the preparation.     

Subunit organization of Euglena chromatin

Digestion of $\text{Euglena}$ nuclei or extracted chromatin with micrococcal nuclease results in the identification of a repeating structure. The DNA repeat size, analyzed on agarose and polyacrylamide gels, is found to be 225±13 base pairs. DNase I digestion produces a serie of fragments multiples of roughly 10 bases. Eventhough pressure shearing is necessary to disrupt the though pellicule of the phytoflagellate, we confirm that, in $\text{Euglena}$, chromatin organization is similar to that of other eukaryotes.     

Comparison of isolated peanut agglutinin receptor glycoproteins from human,bovine and porcine erythrocyte membranes

Affinity chromatography has been used to isolate and compare the peanut agglutinin receptors from neuraminidase-treated human, bovine and porcine erythrocyte membranes. Passage of Triton X-100-solubilised membrane material through either Sepharose- or acrylamide-based affinity columns resulted in the reversible binding of receptor molecules to the immobilised lectin. Elution with 0.2M galactose released specifically bound glycoprotein fractions, the composition and molecular weights of which were determined by polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulphate.Carbohydrate analysis by gas chromatography identified these bound glycoprotein fractions as the major sources of the $\text{O-}\text{glycosidic-linked}$ disaccharide $\text{galactosyl}\text{-β-(1 → 3)-N-}\text{acetylgalactosamine}$ in these membranes. It is suggested that these isolated fractions represent a discrete population of glycoproteins within the membranes studied, which possess both $\text{O-}\text{glycosidic}$- and $\text{N-}\text{glycosidic-linked}$ carbohydrates.     

Molecular weight distribution of interacting proteins calculated by multiple regression analysis from sedimentation equilibrium data: an interpretation of alpha s1-kappa-casein interaction.

Multiple regression analysis in four series with exponentially spaced molecular weight scales shifted by a factor of $\text{2}{}^{\mathrm{<mtext>1</mtext><mtext>4</mtext>}}$ between series was applied to sedimentation equilibrium data for determination of the molecular weight distribution of synthesized model systems consisting of up to three components which represented heterogeneous associating systems. Negative weight fractions of the components which were frequently encountered during multiple regression analysis were forced to zero by successively eliminating from the regression matrix the corresponding molecular weights in order of the magnitude of negative t values. The simplex optimization technique in conjunction with a prohibit-trespassing routine was used to maximize F values obtained from multiple regression analysis in search of the best fit values of component molecular weights. The quantitative information relating molecular weights and relative concentrations obtained by simplex optimization supplemented the regression matrix for calculation of the molecular weight distribution to improve the resolution of the molecular weight distribution patterns. This multiple regression method when carried out in conjunction with the simplex optimization provided a better fit to the data than the linear programming method of Scholte. When applied to mixtures of three standard proteins, the simplex optimization routine yielded values of molecular weights and relative concentrations of the component proteins which were in good agreement with the known values of the original mixtures. The molecular weight distribution calculated from sedimentation equilibrium data of α_s1-κ-casein mixtures using a uv scanner indicated that κ-casein readily dissociated to an oligomer, probably up to trimer, and interacted with the monomer or dimer of α_s1-casein forming a complex of approximately 400,000 molecular weight. This dissociation of κ-casein was promoted in the presence of ovalbumin, a nonmilk protein.     

Identification of the outer membrane protein of E.coli that produces transmembrane channels in reconstituted vesicle membranes

Outer membrane of $\text{Escherichia}$$\text{coli}$ allows a rapid diffusion of saccharides of molecular weights less than 550. This permeability property could be restored in vesicle membranes reconstituted from isolated phospholipids, lipopolysaccharide, and an outer membrane protein. The active protein aggregates were isolated from the insoluble material left after solubilization of cell envelope of $\text{Escherichia}$$\text{coli}$ B with sodium dodecyl sulfate at 35°. Analysis by acrylamide gel electrophoresis, isoelectric focusing and amino terminal amino acid determination revealed that only a single species of protein, with a molecular weight of 36,500 forms the oligoprotein aggregates which produces diffusion channels.