Apparent and Measured Rates of Nitrification in the Hypolimnion of a Mesotrophic Lake

Three distinct phases were observed in the change of dissolved inorganic nitrogen concentrations in the hypolimnion of Grasmere. The second phase of decreasing ammonia and increasing nitrate concentrations was typical of the nitrification process. Observations on nitrate concentration gradients between surface sediments and the water column and experiments using the nitrification inhibitor N-Serve indicated the in situ activity of chemolithotrophic nitrifying organisms. Nitrification rates were estimated throughout the period of stratification by using the N-Serve and [¹⁴C]bicarbonate uptake method. Comparison of the field nitrate concentrations with the predicted nitrate concentrations (from estimates of the nitrification rate) indicated that the method underestimated the true rate of nitrification. Possible reasons for this are discussed.     

Anaerobic Microflora of Everglades Sediments: Effects of Nutrients on Population Profiles and Activities

Everglades sediments (wetland soils) near sources of agricultural runoff had low redox potentials, were blackened with sulfide, and displayed high porewater phosphorus (total) concentrations and high water column conductivities. These sediments yielded 10(sup3)- to 10(sup4)-fold-higher numbers of culturable anaerobes, including methanogens, sulfate reducers, and acetate producers, than did sediments from Everglades and Lake Okeechobee comparative control sites not as directly associated with agricultural runoff. These observations demonstrated that there was a general, rather than specific, enhancement of the anaerobic microflora in the sediments most likely influenced by agricultural runoff. Despite these differences in microfloral patterns, methylmercury and total mercury levels were similar among these contrasting sediments. Although available sulfate and phosphorus appeared to stimulate the productivity of sulfate reducers in Everglades sediments, the number of culturable sulfate reducers did not directly correspond to the concentration of sulfate and phosphorus in porewaters. Microcosms supplemented with sulfate, nitrate, and phosphate altered the initial capacities of the sediment microflora to produce acetate and methane from endogenous matter. For sediments nearest sources of agricultural runoff, phosphorus temporarily enhanced acetate formation and initially suppressed methane production, sulfate enhanced acetate formation but did not significantly alter the production of methane, and nitrate totally suppressed the initial production of both methane and acetate. In regards to the latter, microbes capable of dissimilating nitrate to ammonium were present in greater culturable numbers than denitrifiers. In microcosms, acetate was a major source of methane, and supplemental hydrogen was directed towards the synthesis of acetate via CO(inf2)-dependent acetogenesis. These findings demonstrate that Everglades sediments nearest agricultural runoff have enhanced anaerobic microbial profiles and that the anaerobic microflora are poised to respond rapidly to phosphate, sulfate, and nitrate input.     

Proton transport by phosphate diffusion--a mechanism of facilitated CO2 transfer

We have measured CO2 fluxes across phosphate solutions at different carbonic anhydrase concentrations, bicarbonate concentration gradients, phosphate concentrations, and mobilities. Temperature was 22-25 degrees C, the pH of the phosphate solutions was 7.0-7.3. We found that under physiological conditions of pH and pCO2 a facilitated diffusion of CO2 occurs in addition to free diffusion when (a) sufficient carbonic anhydrase is present, and (b) a concentration gradient of HCO3- is established along with a pCO2 gradient, and (c) the phosphate buffer has a mobility comparable to that of bicarbonate. When the phosphate was immobilized by attaching 0.25-mm-long cellulose particles, no facilitation of CO2 diffusion was detectable. A mechanism of facilitated CO2 diffusion in phosphate solutions analogous to that in albumin solutions was proposed on the basis of these findings: bicarbonate diffusion together with a facilitated proton transport by phosphate diffusion. A mathematical model of this mechanism was formulated. The CO2 fluxed predicted by the model agree quantitatively with the experimentally determined fluxes. It is concluded that a highly effective proton transport mechanism acts in solutions of mobile phosphate buffers. By this mechanism; CO2 transfer may be increased up to fivefold and proton transfer may be increased to 10,000-fold.     

Nitrogen transformations in microenvironments of river beds and riparian zones

The soil of flooded riparian zones, the rhizosphere of riparian plants, biofilms at solid surfaces in the river, and the surface layer of sediments all constitute important environments for the oxidative or reductive transformations of inorganic nitrogen compounds. The exact microzonation and coupling of the processes have recently been studied intensively with ¹⁵N enrichment methods and microsensors for NH₄⁺, NO₂⁻, NO₃⁻, and N₂O. Microsensor analyses of gradients in sediments and biofilms have shown that nitrate production takes place in an aerobic surface zone that has a maximum thickness of a few millimeters in most shallow-water sediments and may be as thin as 100 μm in biofilms from very eutrophic environments. In the anoxic zone, denitrification is also concentrated in a zone of maximum a few millimeters, and typically half of the nitrate produced by nitrification is denitrified while the other half escapes to the water. The supply of nitrate from above is primarily controlled by the oxic layer acting as a diffusion barrier, and therefore denitrification is generally a linear function of the nitrate concentration in the water. The overlying water is thus a much more important source of nitrate for denitrification if the concentration is high. The rate and location of denitrification are also affected by bioturbating animals, benthic microphytes, plants, and bacteria performing dissimilatory nitrate reduction to ammonium (DNRA).     

Regeneration of inorganic phosphorus and nitrogen from decomposition of seston in a freshwater sediment

The mineralization of phosphorus and nitrogen from seston was studied in consolidated sediment from the shallow Lake Arreskov (July and November) and in suspensions without sediment (July). In the suspension experiment, phosphorus and nitrogen were mineralized in the same proportions as they occurred in the seston. During the 30 days suspension experiment, 47 and 43% of the particulate phosphorus and nitrogen, respectively, was mineralized with constant rates.Addition of seston to the sediment had an immediate enhancing effect on oxygen uptake, phosphate and ammonia release, whereas nitrate release decreased due to denitrification. The enhanced rates lasted for 2–5 weeks, while the decrease in nitrate release persisted throughout the experiment. The increase in oxygen uptake (equivalent to 21% of the seston carbon) was, however, only observed in the July experiment. The release of phosphorus and nitrogen from seston decomposing on the sediment surface differed from the suspension experiments. Thus, between 91 and 111% of the phosphorus in the seston was released during the experiments. Due to opposite directed effects on ammonium and nitrate release, the resulting net release of nitrogen was relatively low.A comparison of C/N/P ratios in seston, sediment and flux rates indicated that nitrogen was mineralized faster than phosphorus and carbon. Some of this nitrogen was lost through denitrification and therefore not measurable in the flux of inorganic nitrogen ions. This investigation also suggests that decomposition of newly settled organic matter in sediments have indirect effects on sediment-water exchanges (e.g. by changing of redox potentials and stimulation of denitrification) that modifies the release of mineralized phosphate and nitrogen from the sediment.     

The role of water exchange between a stream channel and its hyporheic zone in nitrogen cycling at the terrestrial-aquatic interface

The subsurface riparian zone was examined as an ecotone with two interfaces. Inland is a terrestrial boundary, where transport of water and dissolved solutes is toward the channel and controlled by watershed hydrology. Streamside is an aquatic boundary, where exchange of surface water and dissolved solutes is bi-directional and flux is strongly influenced by channel hydraulics. Streamside, bi-directional exchange of water was qualitatively defined using biologically conservative tracers in a third order stream. In several experiments, penetration of surface water extended 18 m inland. Travel time of water from the channel to bankside sediments was highly variable. Subsurface chemical gradients were indirectly related to the travel time. Sites with long travel times tended to be low in nitrate and DO (dissolved oxygen) but high in ammonium and DOC (dissolved organic carbon). Sites with short travel times tended to be high in nitrate and DO but low in ammonium and DOC. Ammonium concentration of interstitial water also was influenced by sorption-desorption processes that involved clay minerals in hyporheic sediments. Denitrification potential in subsurface sediments increased with distance from the channel, and was limited by nitrate at inland sites and by DO in the channel sediments. Conversely, nitrification potential decreased with distance from the channel, and was limited by DO at inland sites and by ammonium at channel locations. Advection of water and dissolved oxygen away from the channel resulted in an oxidized subsurface habitat equivalent to that previously defined as the hyporheic zone. The hyporheic zone is viewed as stream habitat because of its high proportion of surface water and the occurrence of channel organisms. Beyond the channel's hydrologic exchange zone, interstitial water is often chemically reduced. Interstitial water that has not previously entered the channel, groundwater, is viewed as a terrestrial component of the riparian ecotone. Thus, surface water habitats may extend under riparian vegetation, and terrestrial groundwater habitats may be found beneath the stream channel.     

Environmental Factors Correlated with Size of Bacterial Populations in a Polluted Stream

Samples of water were taken from a polluted zone of the Gallinas River and analyzed as to numbers of total bacteria, coliforms, and fecal streptococci. Environmental factors measured were temperature, pH and concentrations of detergent, nitrate plus nitrite nitrogen, sulfate, chloride, bicarbonate, and phosphate. Thirty-two observations were made from 12 March through 22 July 1971. Stepwise multiple linear regression analyses of the data were carried out by computer to determine which of the environmental factors were significantly correlated with numbers of bacteria present. A multiple linear regression equation was constructed for each bacteriological parameter as a function of significant variables only. Log total bacteria was correlated positively with bicarbonate, phosphate, and detergent concentrations. Log coliforms was correlated positively with phosphate and sulfate concentrations and negatively with chloride concentration. Log fecal streptococci was correlated positively with bicarbonate and chloride concentrations.     

Changes in the composition of rainwater upon passage through the canopies of trees and of ground vegetation in a Dutch oak-birch forest

The composition of canopy throughfall water in an oak-birch woodland, heavily affected by atmospheric deposition of N and S, changed markedly upon contact with the above-ground parts of the ground vegetation, which consisted mainly of bracken. The fluxes of nitrate and H⁺ decreased, simultaneously with an increase in the flux of bicarbonate, indicative of above-ground uptake of nitrate by the ground vegetation. This above-ground assimilation takes place in spite of abundant availability of inorganic nitrogen in the root zone of the ground vegetation. Fluxes of phosphate were somewhat lower, and those of ammonium somewhat higher in throughfall of the ground vegetation than in that of the tree layer. Although those differences were not statistically significant, they do suggest assimilation of some P and extra net dry deposition of atmospheric ammonia below the tree canopies.     

Benthic fluxes of nutrients and some trace metals in the Tamar estuary,SW England

Pore water concentration gradients and fluxes of chemical components have been studied in sediments from six intertidal sites in the Tamar Estuary, SW England over the course of a year. Fluxes of nutrients (ammonia, nitrate, nitrite, phosphate and silicate) and trace metals (iron, manganese, zinc, copper and cadmium) were determined using a laboratory microcosm incorporatingin situ pore water samplers. Nutrients (except nitrate) were transported out of the sediment throughout the year, but nitrate fluxes were directed into the sediment in the summer (denitrification) and out of the sediment in the winter (nitrification). The activities of benthic macrofauna resulted in enhanced fluxes but these differed between sites depending on population structure and density and whether irrigation or sediment reworking predominated. Fluxes of trace metals were seasonally and spatially variable and specific differences were observed that could be attributed to both chemical and biological activity.     

In situ andin vivo studies on the breakdown ofNymphaea alba L. (Nymphaeaceae)

Summary The breakdown of floating leaves ofNymphaea alba was studied with litterbags in two aquatic systems,viz., an alkaline, eutrophic former riverbed (Oude Waal) and an acid, oligotrophic pool (Voorste Choorven). It was found that the floating leaves from the Oude Waal decomposed at a faster rate than those from the Voorste Choorven when they were incubated in their natural system. In order to get insight in the parameters which determine the observed differences in the field, laboratory experiments were performed. Leaf discs ofN.alba were incubated in staged concentration gradients of some important chemical parameters (bicarbonate, ammonium, nitrate, orthophosphate, sulphate, pH, combinations of nitrate and phosphate; nitrate and bicarbonate, and bicarbonate and sulphate). It appeared that the differences in decomposition rate as observed in the field could be largely explained by the pH and alkalinity of the system-water, and the chemical composition and physiological state of the plant material.Contribution nr. 36 of the nymphaeid project.     

Biogeochemical mass-balances (C, N, P, Si) in three large reservoirs of the Seine Basin (France)

Three major reservoirs (Marne, Seine and Aube), situated in the upstream basin of the river Seine represent a storage capacity of 800 10⁶ m³. In order to quantify the possible role of these reservoirs as a sink or source of nutrients and organic matter for the river system, an input/output mass-balance of suspended matter, organic carbon, inorganic nitrogen forms, phosphorus and reactive silica was established, providing reliable estimates of their retention/elimination and export. The study was carried out over 3 years (1993, 1994 and 1995) in differing hydrological conditions. The retention times varied from 0.3 to 0.8 year, depending on the reservoir and the year, but was longer in 1993 that was a drier year than 1994 and 1995, hydrologically quite similar.Regarding retention (or elimination) and export, the behaviour of the three studied reservoirs was similar. A clear loss or retention of nitrogen, phosphorus and silica was observed in the reservoirs and represented about 40% of the incoming flux of nitrate, 50% of silica, and 60% of phosphate. The retention was lower for total phosphorus than for phosphate. The reservoirs are also sites of suspended matter deposition except during the decennial drawdown, when suspended matter is exported. For inorganic nitrogen, the average amount of nitrate retained in the Seine basin reservoirs upstream from Paris is 5000 tonnes y^–1 that is almost equal to the estimated retention by deposition or denitrification in river channel sediments for the whole drainage network. The retention in the reservoirs represents about 12% of the total flux of nitrate at the outlet of the basin upstream from Paris, and 5% at the mouth of the Seine River.We also calculated inlake C, N, P, Si budgets on the basis of direct process measurements. Measurements of planktonic primary and bacterial activity production led to annual net production of 4200 and 580 tonnes of carbon, respectively. A reasonable value (450 tonnes of carbon) of grazing was calculated. Corresponding N, P, Si fluxes were drawn from appropriate C:N:P:Si ratios. Benthic fluxes were measured with bell jars. The retention of P and Si represents a small fraction of important internal fluxes of phytoplanktonic uptake and recycling, while inorganic nitrogen retention depends mostly on benthic denitrification. The behaviour of P and Si differs in that P is mainly recycled in the water column, while Si dissolution occurs at the sediment interface. Nitrogen is recycled in both the planktonic and the benthic phase.     

The influence of nitrate on the phosphorus flux to and from oxygen depleted lake sediments

Addition of nitrate to an oxygen depleted sediment leads to a stimulation of the mineralization process if a major part of the nitrate is dissimilatorily reduced. This may cause an increased release of phosphate from some sediments. Nitrate, however, maintains a high redox potential at the sediment surface and thus prevents a release of iron-bound phosphorus. These two counteracting effects of nitrate addition to sediment-water systems were demonstrated in laboratory experiments. A high supply of nitrate to a phosphorus-saturated sediment caused an increased release of phosphate and ammonium once the nitrate had been used up. However, from other sediments there was no or very little release of phosphate but an increased release of ammonium caused by high nitrate dissimilation, probably due to the very high capacity of these sediments to bind liberated phosphate or due to storage of phosphorus in an increased bacterial biomass. Phosphorus fractionation, before and after the experiments with the sediments, provided information on transfers to, from and within the sediments.     

Habitat and sediment preferences ofAxarus festivus larvae

During fall draw-down of a reservoir in northeast Kansas it was observed that larvae ofAxarus festivus were restricted to highly weathered Pennsylvanian Shale outcrops and surrounding coarse sediments with high-clay content derived from erosion of the shale outcroppings. Larvae constructed burrows into the outcrops and eroded coarse sediments, which they used to filter feed by setting up currents through the burrows. Burrows were widely distributed over the outcrops, with average densities ranging from 372–2,351 burrows m^–2. However, closer inspection revealed that burrows were more common at apices of individual shale strata, where weathering of the outcrop was most advanced. Here burrows were more uniformly distributed and densities ranged to 4,166 burrows m^–2. 73% of burrows contained larvae. Burrows were generally U-shaped, and averaged 1.8 mm in diameter and 42 mm in total length. Laboratory experiments revealed that 4th instar larvae removed from burrows could construct new burrows in weathered shale, but preferentially used old empty burrows if available. When given choices among alternative sediment combinations of sandvs. finely-ground shale, sandvs. coarsely-ground shale, and finely-ground shalevs. coarsely-ground shale, larvae exhibited statistically significant preferences for the finely-ground shales (P<0.001), coarsely-ground shales (P<0.001), and coarsely-ground shales (P<0.01), respectively. It is concluded that larvae (1) actively select shale or high-clay content sediments, (2) can differentiate among sediments with differing physical properties and (3) exhibit behavioral choices for sediment types that guide them toward shale outcrops.     

Single radial immunodiffusion as a method for the identification and quantitation of diphtheria and tetanus toxoids in adsorbed vaccines

The immunochemical techniques of double diffusion and single radial diffusion in agarose gels were compared and each considered as possible alternative methods to the methods stipulated by the European Pharmacopoeia for the identification of diphtheria and tetanus toxoids in adsorbed vaccines. Both methods identified the toxoids but single radial diffusion was found to be preferable as the precipitin bands formed were visible without staining. Single radial diffusion was further investigated for its suitability as a quantitative method and was found to give reproducible estimates of the amount of toxoid present in all vaccines tested. However, in the case of tetanus toxoids these estimates were lower than the amounts stated to have been incorporated in the vaccines by the manufacturers. It was concluded that single radial diffusion would be a suitable replacement in the European Pharmacopoeia as a method for the identification of the diphtheria and tetanus components of adsorbed vaccines provided that elution could also be achieved from vaccines containing calcium phosphate.     

红树林湿地多环芳烃的微生物降解

红树林(mangrove)是海陆交汇带重要的湿地生态系统,也是环境污染物蓄积与转化的热区.多环芳烃(polycyclic aromatic hydrocarbons,PAHs)因其环境蓄积特点在红树林生境中广泛分布,威胁生态系统健康,其降解转化是近年的研究重点.本文聚焦红树林湿地多环芳烃的微生物降解研究现状,从红树林生...     

The effects of water depth and density on the growth of a unionid clam*

SUMMARY. 1. Unionid clams from Narrow Lake, Alberta, were collected to quantify the natural variation in growth, to assess the natural variation in abundance, age and size distribution, and growth with water depth in the lake, and to conduct in situ experiments to directly test the effects of water depth (temperature) and clam abundance on clam growth. 2. The unionid clam, Anodonta grandis simpsoniana, showed wide variation in length at a given age. There were no significant differences in growth between clams collected at 1,3, 5, and 7m depths in the lake despite marked differences in water temperature. The wide variation in clam biomass within each depth zone may have masked possible effects of water depth. 3. The effect of water depth and variation in clam density on clam growth was tested directly by stocking clams into small enclosures at densities equivalent to 50, 150, 250, 350 and 450g m-2 (live weight) at each of 1, 3, 5 and 7 m depths in Narrow Lake (each depth and abundance treatment in triplicate). A uniform sandy substrate was used in all enclosures to eliminate any possible effect of substrate type on growth. 4. Mortality was negligible (0.9%) during the experiment. Clam density had no significant effect on clam growth which suggests that clam growth was not food limited in the lake. 5. Clams reared at 7 m grew more slowly than clams reared at 1, 3 and 5 m. Clams reared at 5 m grew more slowly than clams reared at 1 and 3m. Growth of clams reared at 1 and 3m did not differ. These differences in growth were strongly correlated with the measured differences in water temperature between depths. 6. Migration between depths probably accounts for the lack of a depth effect on clams growing in the natural habitat.     

Theoretical support for the heart phosphocreatine energy transport shuttle based on the intracellular diffusion limited mobility of ADP

Flux rates for phosphate metabolites were calculated using the equation for radial diffusion, assuming heart intracellular conditions and a 5% concentration gradient. The data show that while the flux of phosphocreatine is about 3 times faster than ATP, both are more than two orders of magnitude greater than the known maximum rate of ATP utilization. In contrast, since the concentration of free ADP is very low, its flux is below the maximum rate of ATP turnover, while the flux of creatine is almost 3 orders of magnitude greater than ADP. The data suggest that the rate of high-energy phosphate production could be limited by ADP diffusion, with creatine thus substituting as the primary cytoplasmic-mitochondrial phosphate acceptor.     

Nutrient release rates from the sediments of Saginaw Bay,Lake Huron

Direct measurements of net production rates and pore water profiles of solutes in the fine-grained sediments of Saginaw Bay, imply corresponding steady-state fluxes to the overlying water of 1.1–1.3 (I), 450–1010 (NH₄ ⁺), 1250–2650 (Si(OH)₄), 3000–3400 (Ca²⁺), 440–1330 (Mg²⁺), 1.5–728 (Fe²⁺), and 179–281 (Mn²⁺) moles/m²/day and 11.0–11.8 (alkalinity) meq/m²/day at 17.5 °C. Silica production rates in sediments apparently follow first order kinetics with a rate coefficient of 0.09/day and a steady-state silica concentration of 1.2 mM at 23.5°C. The remaining solutes follow kinetics approximately independent of solute concentration over the range of concentrations observed. Measured solute production rates are consistent with observed solute profiles only if lateral diffusion gradients are maintained in the sediments by the burrowing and irrigation activity of benthic organisms such asChironomous, the dominant burrower in Saginaw Bay. Assuming that solute fluxes from Saginaw Bay are representative of all of the post-glacial sediments of Lake Huron, the iodine flux from sediments is comparable to the total fluvial input of iodine. The extrapolated silica fluxes from Lake Huron sediments balance the estimated biogenic silica flux to the sediments.     

Presence of nitrate-accumulating sulfur bacteria and their influence on nitrogen cycling in a shallow coastal marine sediment

Nitrate flux between sediment and water, nitrate concentration profile at the sediment-water interface, and in situ sediment denitrification activity were measured seasonally at the innermost part of Tokyo Bay, Japan. For the determination of sediment nitrate concentration, undisturbed sediment cores were sectioned into 5-mm depth intervals and each segment was stored frozen at -30 degrees C. The nitrate concentration was determined for the supernatants after centrifuging the frozen and thawed sediments. Nitrate in the uppermost sediment showed a remarkable seasonal change, and its seasonal maximum of up to 400 microM was found in October. The directions of the diffusive nitrate fluxes predicted from the interfacial concentration gradients were out of the sediment throughout the year. In contrast, the directions of the total nitrate fluxes measured by the whole-core incubation were into the sediment at all seasons. This contradiction between directions indicates that a large part of the nitrate pool extracted from the frozen surface sediments is not a pore water constituent, and preliminary examinations demonstrated that the nitrate was contained in the intracellular vacuoles of filamentous sulfur bacteria dwelling on or in the surface sediment. Based on the comparison between in situ sediment denitrification activity and total nitrate flux, it is suggested that intracellular nitrate cannot be directly utilized by sediment denitrification, and the probable fate of the intracellular nitrate is hypothesized to be dissimilatory reduction to ammonium. The presence of nitrate-accumulating sulfur bacteria therefore may lower nature's self-purification capacity (denitrification) and exacerbate eutrophication in shallow coastal marine environments.     

Internal loading of phosphorus from sediments of Lake Pontchartrain (Louisiana,USA) with implications for eutrophication

Diffusive flux of bioavailable soluble reactive phosphorus (SRP) across the sediment–water interface is one mechanism by which sediments can be a source of phosphorus to the water column in aquatic systems and contribute to primary productivity. This process is dependent on sediment biogeochemistry and SRP concentration gradients at the sediment–water interface. In systems subjected to episodic external pulses of nutrient-rich water, SRP concentration gradients can have potential implications for diffusive flux. In this study, we sought to investigate two hypotheses: (1) diffusive flux of SRP from sediments is a significant source of SRP in the annual budget for the oligohaline Lake Pontchartrain estuary and (2) under SRP-depleted water column conditions following large episodic, external pulses of nitrogen-rich Mississippi River water to the estuary, internal SRP loading by diffusive flux can regenerate SRP in the water column to previously observed levels rapidly. Our specific objectives were to: (i) determine sediment, water column, and phytoplankton characteristics at multiple locations in the estuary, (ii) measure rates of SRP diffusive flux from sediments using intact cores under aerobic and anaerobic incubations, (iii) estimate the potential for water column SRP regeneration by diffusive flux under SRP-depleted conditions using a simple model, and (iv) estimate the annual load of SRP from the sediments by diffusive flux. Results indicate that diffusive flux of SRP from Lake Pontchartrain sediments likely contributes ~30–44% of the annual SRP load to the estuary. Further, internal SRP loading by diffusion has the potential to regenerate SRP in SRP-depleted waters to previously observed concentrations in <60 days. Our findings suggest that a sequence of events is feasible where external pulses of nitrogen-rich water produce phosphorus-limited conditions, followed by an internal pulse of SRP from sediments to restore nitrogen-limited conditions. This internal SRP load may be an important contributor in promoting blooms of nitrogen-fixing harmful algae under summertime low-nutrient conditions.