Risk screening of non‐native freshwater fishes at the frontier between Asia and Europe: first application in Turkey of the fish invasiveness screening kit

The aim of the present study was to assess the invasive potential of introduced non‐native and translocated fishes in Turkey (Anatolia and Thrace) by applying the Fish Invasiveness Screening Kit (FISK), a risk identification tool for freshwater fishes. From independent evaluations by two assessors of 35 species, calibration of FISK for Turkey identified a threshold score of 23, which reliably distinguished between potentially invasive (high risk) and potentially non‐invasive (medium to low risk) fishes for Anatolia (Asia) and Thrace (Europe). No species was categorized as ‘low risk’, 18 species were categorized as ‘medium risk’ and 17 as ‘high risk’ (two being ‘moderately high risk’, nine ‘high risk’, and six ‘very high risk’). The highest scoring species was gibel carp Carassius gibelio, whereas the lowest scoring species was Caucasian dwarf goby Knipowitschia caucasica, a translocated species. Assessor certainty in their responses averaged overall between ‘mostly uncertain’ and ‘mostly certain’, with red piranha Pygocentrus nattereri and topmouth gudgeon Pseudorasbora parva achieving the lowest and highest certainty values, respectively, and with overall significant differences in certainty between assessors. The results of the present study indicate that FISK is a useful and viable tool for identifying potentially invasive non‐native fishes in Turkey, a country characterized by natural biogeographical frontiers.     

Life After Logging: Strategic Withdrawal from the Garden of Eden or Tactical Error for Wilderness Conservation?

Conservation management has undergone a dramatic paradigm shift from the strong ‘wilderness conservation’ ethos of the 1980s and 1990s to the ‘biodiversity on degraded lands’ ethos of recent years. Most conservation biologists now consider that wilderness conservation alone is no longer sufficient to conserve biodiversity, and conservation strategies must also demand more effective protection for biodiversity on degraded lands. Recognition of this shifting paradigm in biodiversity conservation has led to an overt change in tone of recent studies, emphasizing relatively modest effects of human disturbance, and high biodiversity values on some degraded lands. A case in point is a series of studies from Southeast Asia reporting relatively modest impacts of logging on biodiversity, with the majority of species (75%) persisting after repeated intensive logging. This is a marked shift in conservation message after >30 yrs of research showing substantial adverse effects of logging on biodiversity, and raises serious questions about the appropriate ways to qualify the conflicting messages that ‘human impact degrades biodiversity’ yet ‘degraded habitats have high biodiversity value.’ Clearly logging is the lesser of two land‐use evils compared with conversion to intensive cattle pastures, crop fields or oil palm plantations, but there is a real risk that overselling the ‘biodiversity on degraded lands’ paradigm might end up being a double‐edged sword for conservation management. After all, if >75 percent of species are resilient to repeated logging, why bother trying to preserve the few remaining wilderness areas from being logged themselves? It remains to be seen whether this new message of ‘weak’ effects of logging on biodiversity will serve its strategic purpose of conserving biodiversity on degraded lands, or simply devalue the last vestiges of wild nature.     

Time and space in biogeography: response to Parenti & Ebach (2013)

A recent Guest Editorial by Parenti & Ebach (2013, Journal of Biogeography, 40, 813–820) disagrees with the methods or interpretations in two of our recent papers. In addition, the authors open a debate on biogeographical concepts, and present an alternative philosophy for biogeographical research in the context of their recently described biogeographical subregion called ‘Pandora’. We disagree with their approach and conclusions, and comment on several issues related to our differing conceptual approaches for biogeographical research; namely, our use of molecular phylogenetic analyses, including time estimates; and Parenti & Ebach's reliance on taxon/general area cladograms. Finally, we re‐examine their ‘tests’ supporting the existence of ‘Pandora’.     

A neutral terminology to define 'invasive' species

The use of simple terms to articulate ecological concepts can confuse ideological debates and undermine management efforts. This problem is particularly acute in studies of nonindigenous species, which alternatively have been called ‘exotic’, ‘introduced’, ‘invasive’ and ‘naturalised’, among others. Attempts to redefine commonly used terminology have proven difficult because authors are often partial to particular definitions. In an attempt to form a consensus on invasion terminology, we synthesize an invasional framework based on current models that break the invasion process into a series of consecutive, obligatory stages. Unlike previous efforts, we propose a neutral terminology based on this framework. This ‘stage‐based’ terminology can be used to supplement terms with ambiguous meanings (e.g. invasive, introduced, naturalized, weedy, etc.), and thereby improve clarity of future studies. This approach is based on the concept of ‘propagule pressure’ and has the additional benefit of identifying factors affecting the success of species at each stage. Under this framework, invasions can be more objectively understood as biogeographical, rather than taxonomic, phenomena; and author preferences in the use of existing terminology can be addressed. An example of this recommended protocol might be: ‘We examined distribution data to contrast the characteristics of invasive species (stages IVa and V) and noninvasive species (stages III and IVb)’.     

Pathogeography: leveraging the biogeography of human infectious diseases for global health management

Biogeography is an implicit and fundamental component of almost every dimension of modern biology, from natural selection and speciation to invasive species and biodiversity management. However, biogeography has rarely been integrated into human or veterinary medicine nor routinely leveraged for global health management. Here we review the theory and application of biogeography to the research and management of human infectious diseases, an integration we refer to as ‘pathogeography’. Pathogeography represents a promising framework for understanding and decomposing the spatial distributions, diversity patterns and emergence risks of human infectious diseases into interpretable components of dynamic socio‐ecological systems. Analytical tools from biogeography are already helping to improve our understanding of individual infectious disease distributions and the processes that shape them in space and time. At higher levels of organization, biogeographical studies of diseases are rarer but increasing, improving our ability to describe and explain patterns that emerge at the level of disease communities (e.g. co‐occurrence, diversity patterns, biogeographic regionalisation). Even in a highly globalized world most human infectious diseases remain constrained in their geographic distributions by ecological barriers to the dispersal or establishment of their causal pathogens, reservoir hosts and/or vectors. These same processes underpin the spatial arrangement of other taxa, such as mammalian biodiversity, providing a strong empirical ‘prior’ with which to assess the potential distributions of infectious diseases when data on their occurrence is unavailable or limited. In the absence of quality data, generalized biogeographic patterns could provide the earliest (and in some cases the only) insights into the potential distributions of many poorly known or emerging, or as‐yet‐unknown, infectious disease risks. Encouraging more community ecologists and biogeographers to collaborate with health professionals (and vice versa) has the potential to improve our understanding of infectious disease systems and identify novel management strategies to improve local, global and planetary health.     

Rethinking the conceptual foundations of habitat fragmentation research

The conceptual foundations of habitat fragmentation research have not kept pace with empirical advances in our understanding of species responses to landscape change, nor with theoretical advances in the wider disciplines of ecology. There is now real debate whether explicit recognition of ‘habitat fragmentation’ as an over‐arching conceptual domain will stimulate or hinder further progress toward understanding and mitigating the effects of landscape change. In this paper, we critically challenge the conceptual foundations of the discipline, and attempt to derive an integrated perspective on the best way to advance mechanistic understanding of fragmentation processes. We depict the inherent assumptions underlying the discipline as a ‘conceptual phase space’ of contrasting false dichotomies in fragmentation ‘problem space’. In our opinion, the key determinant of whether ‘habitat fragmentation’ can remain a cohesive framework lies in the concept of ‘interdependence’: 1) interdependence of landscape effects on species and 2) interdependence of species responses to landscape change. If there is non‐trivial interdependence among the various sub‐components of habitat fragmentation, or non‐trivial interdependence among species responses to landscape change, then there will be real heuristic value in ‘habitat fragmentation’ as a single conceptual domain. At present, the current paradigms entrenched in the fragmentation literature are implicitly founded on strict independence of landscape effects (e.g. the debate about the independent effects of habitat loss versus fragmentation per se) and strict independence of species responses (e.g. the individualistic species response models underpinning landscape continuum models), despite compelling evidence for interdependence in both effects and responses to fragmentation. We discuss how strong ‘interdependence’ of effects and responses challenges us to rethink long‐held views, and re‐cast the conceptual foundations of habitat fragmentation in terms of spatial context‐dependence in the effects of multiple interacting spatial components of fragmentation, and community context‐dependence in the responses of multiple interacting species to landscape change.     

Weighting and indirect effects identify keystone species in food webs

Species extinctions are accelerating globally, yet the mechanisms that maintain local biodiversity remain poorly understood. The extinction of species that feed on or are fed on by many others (i.e. ‘hubs’) has traditionally been thought to cause the greatest threat of further biodiversity loss. Very little attention has been paid to the strength of those feeding links (i.e. link weight) and the prevalence of indirect interactions. Here, we used a dynamical model based on empirical energy budget data to assess changes in ecosystem stability after simulating the loss of species according to various extinction scenarios. Link weight and/or indirect effects had stronger effects on food‐web stability than the simple removal of ‘hubs’, demonstrating that both quantitative fluxes and species dissipating their effects across many links should be of great concern in biodiversity conservation, and the potential for ‘hubs’ to act as keystone species may have been exaggerated to date.     

Evolution, origin and age of lineages in the Californian and Mediterranean floras

This paper addresses some of the conceptual issues involved in the analysis of the age and origin of mediterranean‐climate plant taxa, paying particular attention to three topics: (1) the importance of an explicit time frame in the definition of biogeographical origins, (2) the distinction between the age of traits and the age of taxa, and (3) the idea of mediterranean‐type ecosystems as environmental islands. (1) In California, recent analyses demonstrate that the diversity of species derived from different biogeographical origins is significantly correlated with temperature and precipitation gradients. These patterns support the hypothesis that niche conservatism is an important factor structuring modern diversity gradients. However, depending on how far back in time one looks, a species may be assigned to different origins; future discussions of biogeographical origins need to address the appropriate time frame for analysis. (2) Past research has demonstrated distinctive trait syndromes among woody plants of the Mediterranean, Chile, California and Mexico, and proposed that the syndromes are associated with lineages of different age in these floras. Reanalysis of individual traits demonstrates greater variability among regions than previously reported. The classification of plants into ‘old’ and ‘new’ genera is re‐evaluated, and it is suggested that greater attention be paid to the age of traits, rather than to the age of taxa, especially at an arbitrary rank such as genus. (3) The idea of mediterranean‐climate regions as ‘climatic islands’ is examined. Space–time diagrams of climate enable one to view the emergence of distinctive climatic regions in a continental context. The terms ‘synclimatic’ and ‘anticlimatic’ are proposed, referring to migration routes that parallel climate contours in space and time versus those that cross contours (including the case of geographic stasis in the face of climate change), respectively. Mediterranean‐climate regions have served as important case studies in plant ecology and evolution, and merit continued close examination in the light of continued advances in phylogenetics and palaeoecology.     

Geography and island geomorphology shape fish assemblage structure on isolated coral reef systems

We quantify the relative importance of multi‐scale drivers of reef fish assemblage structure on isolated coral reefs at the intersection of the Indian and Indo‐Pacific biogeographical provinces. Large (>30 cm), functionally‐important and commonly targeted species of fish, were surveyed on the outer reef crest/front at 38 coral reef sites spread across three oceanic coral reef systems (i.e. Christmas Island, Cocos (Keeling) Islands and the Rowley Shoals), in the tropical Indian Ocean (c. 1.126 x 106 km²). The effects of coral cover, exposure, fishing pressure, lagoon size and geographical context, on observed patterns of fish assemblage structure were modelled using Multivariate Regression Trees. Reef fish assemblages were clearly separated in space with geographical location explaining ~53 % of the observed variation. Lagoon size, within each isolated reef system was an equally effective proxy for explaining fish assemblage structure. Among local‐scale variables, ‘distance from port’, a proxy for the influence of fishing, explained 5.2% of total variation and separated the four most isolated reefs from Cocos (Keeling) Island, from reefs with closer boating access. Other factors were not significant. Major divisions in assemblage structure were driven by sister taxa that displayed little geographical overlap between reef systems and low abundances of several species on Christmas Island corresponding to small lagoon habitats. Exclusion of geographical context from the analysis resulted in local processes explaining 47.3% of the variation, highlighting the importance of controlling for spatial correlation to understand the drivers of fish assemblage structure. Our results suggest reef fish assemblage structure on remote coral reef systems in the tropical eastern Indian Ocean reflects a biogeographical legacy of isolation between Indian and Pacific fish faunas and geomorphological variation within the region, more than local fishing pressure or reef condition. Our findings re‐emphasise the importance that historical processes play in structuring contemporary biotic communities.     

Contrasting functional traits maintain lichen epiphyte diversity in response to climate and autogenic succession

Aim Lichen epiphytes are important for biodiversity conservation and are also widely applied as environmental indicators. However, biogeographical and ecological knowledge underpinning lichen epiphyte conservation, and the use of lichens as indicators, is based primarily on a limited range of ‘macrolichen’ species. Wider trends in epiphyte biodiversity remain largely unexplored. This paper examines the community structure of lichen epiphytes on aspen (Populus tremula L.) in Scotland, including species across all functional groups and comprising, therefore, taxonomically difficult ‘microlichens’. Location Northern Britain (Scotland). Methods Epiphytes were sampled from 12 sites throughout Scotland and examined at two scales: between and within aspen stands. Species were classified into contrasting functional groups and ordination by detrended correspondence analysis was used to summarize community structure. Results Within aspen stands (between trees) epiphyte communities showed successional patterns related to tree age. These successional patterns changed predictably for stands aligned along a climatic gradient (between stands). Main conclusions A dual climatic–successional trend in epiphyte community structure is presented. Large‐scale trends in epiphyte diversity are explained as the local response of species with contrasting functional traits to climate and autogenic succession. Turnover of functional groups between stands is positively related to β‐diversity, and ecological limits to the frequency of contrasting functional groups are presented. Accordingly, the study and application of lichen species with similar functional traits may inadequately represent patterns of biodiversity. This prompts criticism of the currently accepted conservation strategy, i.e. (1) an emphasis in the conservation literature on ‘macrolichen’ species with similar ecologies and (2) the application of lichen indices over climatically variable geographical areas.     

Getting biodiversity intactness indices right: ensuring that 'biodiversity' reflects 'diversity'

The 2010 biodiversity target of a ‘significant reduction in the current rate of biodiversity loss’ presents challenges for effective measurement of changes in global/regional biodiversity. A simple ‘biodiversity intactness index’ (BII) is attractive in using available data and expert opinion, but is seen to be only weakly linked to ‘biodiversity’ in its usual sense of ‘variation’. An example illustrates how an improved BII score could result even when there are large species losses. A family of alternative biodiversity ‘representativeness indices’ better reflect variation. They use the same readily available information, plus simple species–area relationships (SAR) and genetic diversity curves. A new genetic‐diversity abundance‐fraction curve, like SAR, is linear in log–log space. The new representativeness indices incorporate, through range‐abundance curves, the abundance fraction estimates normally used for BII. Land use or climate change impacts therefore can reflect partial rather than total biodiversity losses at localities. Estimates of biodiversity gains/losses using these indices enable a novel regional planning‐based approach for addressing the 2010 target.     

Keeping pace with climate change: what can we learn from the spread of Lessepsian migrants?

Species need to move to keep pace with changing climates, but we do not know if species can move at the required speed. Spread rates of native species may underestimate how fast species can move, we therefore assessed how fast Lessepsian species (marine non‐native species that invaded the Mediterranean from the Red Sea through the Suez Canal) can spread to give a ‘best‐case’ assessment of the effects of climate change on marine biodiversity. We show that about 20% of Lessepsian species could not spread fast enough to keep pace with climate change in about 20% of the global seas and this suggests that climate change may lead to biodiversity loss. The velocity of climate change on the seabed is much lower than at the sea surface, and as a result of this the proportion of species that keep pace with climate change at the seabed was much larger than at the sea surface. This suggests that locations at depth could act as refuges for slow dispersing species. Our analysis compared different estimates of the spreading abilities of marine species and showed that the estimate of spread rates strongly affects the predicted effect of climate change on biodiversity. Providing more accurate estimates of the spreading ability of marine species should therefore have priority if we want to predict the effect of climate change on marine biodiversity. This study is a first approximation of the potential scale and distribution of global marine biodiversity loss and can provide benchmark estimates of the spread rates that species could achieve in colonizing suitable habitat. Assisted colonization may be required to maintain biodiversity in the most strongly affected areas.     

Biogeographical network analysis of plant species distribution in the Mediterranean region

The delimitation of bioregions helps to understand historical and ecological drivers of species distribution. In this work, we performed a network analysis of the spatial distribution patterns of plants in south of France (Languedoc‐Roussillon and Provence‐Alpes‐Côte d'Azur) to analyze the biogeographical structure of the French Mediterranean flora at different scales. We used a network approach to identify and characterize biogeographical regions, based on a large database containing 2.5 million of geolocalized plant records corresponding to more than 3,500 plant species. This methodology is performed following five steps, from the biogeographical bipartite network construction to the identification of biogeographical regions under the form of spatial network communities, the analysis of their interactions, and the identification of clusters of plant species based on the species contribution to the biogeographical regions. First, we identified two sub‐networks that distinguish Mediterranean and temperate biota. Then, we separated eight statistically significant bioregions that present a complex spatial structure. Some of them are spatially well delimited and match with particular geological entities. On the other hand, fuzzy transitions arise between adjacent bioregions that share a common geological setting, but are spread along a climatic gradient. The proposed network approach illustrates the biogeographical structure of the flora in southern France and provides precise insights into the relationships between bioregions. This approach sheds light on ecological drivers shaping the distribution of Mediterranean biota: The interplay between a climatic gradient and geological substrate shapes biodiversity patterns. Finally, this work exemplifies why fragmented distributions are common in the Mediterranean region, isolating groups of species that share a similar eco‐evolutionary history.     

Invasive plants in conservation linkages: a conceptual model that addresses an underappreciated conservation issue

Conservationists have frequently touted the merits of increased landscape connectivity, usually focusing on the efficacy of conservation linkages (corridors) for maintaining viable populations of target species. An often‐mentioned, but still greatly understudied, concern is that increased landscape connectivity via linkages may also aid the movement of undesired species. This paper provides conceptual guidance for research on one major aspect of this gap: invasive plants in conservation linkages. To guide research goals and methods, I develop a conceptual model describing eight interaction types between invasive plants and linkages, i.e. the ways that invasive plants can exist in and move into, through, and out of conservation linkages. Each interaction type within the model has three main components: linkage, matrix, and focal species. I discuss several aspects of these components, including a) differentiating among matrix types, b) understanding edge effects within the linkages, and c) incorporating relevant invasive species’ ecology (primarily dispersal ecology). Spatially‐explicit documentation of invasive plant distribution is essential to understanding these interactions. By focusing on landscape‐scale patterns in real‐world systems, this model will enhance landscape‐level knowledge of invasion ecology and aid land managers in identifying and prioritizing research and management decisions regarding invasive plants in conservation linkages.     

Regional biogeography of shallow reef fish and macro-invertebrate communities in the Galapagos archipelago

Aim To delineate biogeographical patterns in Galapagos shallow‐water reef fauna at regional scales. Location Galapagos Islands. Methods Fishes and macro‐invertebrates were quantitatively censused using underwater visual techniques along more than 500 transects at defined depth strata across the Galapagos archipelago. Data were analysed using multivariate techniques to define regional patterns and identify species typical of different regions. Results Subtidal communities of fishes and macro‐invertebrates on shallow reefs differed consistently in species composition across the Galapagos archipelago, with three major biogeographical groupings: (1) the ‘far‐northern area’ containing the islands of Darwin and Wolf, (2) the ‘central/south‐eastern area’, including the east coast of Isabela, and (3) the ‘western area’, encompassing Fernandina and western Isabela. In addition, the northern islands of Pinta, Marchena and Genovesa form a separate region in the central/south‐eastern area, and Bahia Elizabeth and Canal Bolivar separate from other parts of the western area. The far‐northern bioregion is characterized by high fish species richness overall, including a high proportion of species of Indo‐Pacific origin. However, very few endemic fishes or species with distributions extending south from Ecuador (‘Peruvian’ species) are present, and the bioregion also possesses relatively low species richness of mobile macro‐invertebrate taxa. By contrast, the ‘western’ bioregion possesses disproportionately high numbers of endemic fish taxa, high numbers of cool‐temperate Peruvian fish species, and high invertebrate species richness, but very few species of Indo‐Pacific origin. The Bahia Elizabeth/Canal Bolivar bioregion possesses more endemic species and fewer species with Peruvian affinities than coasts within the western bioregion. The northern bioregion of Pinta, Marchena and Genovesa represents an overlap zone with affinities to both the far‐northern and south‐eastern islands. The south‐eastern bioregion includes species from a variety of different sources, particularly ‘Panamic’ species with distributions extending north to Central America. Main conclusions On the basis of congruent divisions for reef fish and macro‐invertebrate communities, the Galapagos archipelago can be separated into three major biogeographical areas, two of which can be further subdivided into two regions. Each of these five bioregions possesses communities characterized by a distinctive mix of species derived from Indo‐Pacific, Panamic, Peruvian and endemic source areas. The conservation significance of different regions is not reflected in counts of total species richness. The regions with the lowest overall fish species richness possess a temperate rather than tropical climate and highest levels of endemism.     

Towards a unification of movement ecology and biogeography: conceptual framework and a case study on Afrotropical ducks

Aim We present elements of a new conceptual framework for the unification of biogeography and movement ecology, and demonstrate the value of the new framework using a case study of two species of Afrotropical duck (Anatidae) across a latitudinal gradient. Location Southern Africa. Methods The first part of the paper rests on logic and philosophy. For the second (case study) section, we used data from up to 3 years of satellite telemetry for 26 individuals of two species of Afrotropical duck, the Egyptian goose (Alopochen aegyptiaca) and red‐billed teal (Anas erythrorhyncha), from three different populations with moulting sites spread across 17 degrees of latitude. We compared quantitative measures of movement patterns using principal components analysis and boxplots. Results We argue that unpacking the concept of dispersal into the fundamental elements of movement (internal drivers, external drivers, navigation capacity, and motion capacity) provides a more solid basis for contrasting competing hypotheses in biogeographical studies. We found, surprisingly, that red‐billed teal, a ‘highly nomadic’ species, moved with a relatively high degree of consistency at each of our three study latitudes, while Egyptian geese, a ‘resident’ species, showed latitude‐dependent variation in their movements. However, much of the latitude‐related variation for Egyptian geese was driven by their annual moult migrations, rather than directly by fluctuations in resource availability. Internal factors appear to dominate movements and probably determine the species ranges of both of our study species. Main conclusions The integration of biogeography and movement ecology, through a more sophisticated view of mechanisms formerly lumped together under ‘dispersal’, offers a fertile area for further research. The biogeography of Afrotropical ducks appears to be strongly influenced by internal factors. Biogeographical patterns in this taxon may thus be best understood (and modelled) as a long‐term response to environmental stochasticity, rather than as a deliberate selection of optimal habitat. Latitudinal comparisons emerge as a valuable way of gaining insights into the drivers of movement for widespread species.     

What are the policy priorities for sustaining ecological processes? A case study from Victoria,Australia

Summary Developments in ecological theory indicate that ecological processes have major implications for sustaining biodiversity and the provision of ecosystem services. Consequently, conservation actions that focus solely on particular species, vegetation communities, habitats or sites (‘assets’) are unlikely to be effective over the long term unless the ecological processes that support them continue to function. Efforts to sustain biodiversity must embrace both ‘assets’ and ‘process‐oriented’ approaches. Existing knowledge about ecological processes, incomplete though it is, has not been adequately considered in government decision making. It is, therefore, necessary to consider how to build consideration of ecological processes into legislative and institutional frameworks, policy and planning processes, and on‐ground environmental management. Drawing on insights from interviews, a facilitated workshop, and a literature review, this paper identifies a suite of policy priorities and associated reforms which should assist in ensuring that ecological processes are given more attention in policy‐making processes. It is concluded that a multi‐pronged approach is required, because there are no ‘silver bullets’ for sustaining ecological processes.     

Glacial refugia influence plant diversity patterns in the Mediterranean Basin

Aim The aims of this study were to assess the distribution of putative Mediterranean refugia of plants, to compare the locations of refugia and those of regional hotspots of plant biodiversity, and to provide a critical analysis of the Mediterranean refugium paradigm. Furthermore, we consider how biogeographical and genetic results can be combined to guide global conservation strategies. Location The Mediterranean region. Methods We started from a detailed analysis of the scientific literature (1993–2007) in order to identify refugia in the Mediterranean region, based on intra‐specific phylogeographical studies of plant species. We used population locations together with gene‐pool identity to establish the database, comparing patterns of phylogeographical concordance with the locations of Mediterranean refugia. We then tested the biogeographical congruence between two biodiversity components, namely phylogeographical refugia and regional hotspots. Results We identified 52 refugia in the Mediterranean bioclimatic region and confirmed the role played by the three major peninsulas, with a shared total of 25 refugia. We emphasize the importance of areas that have previously been attributed a lesser role (large Mediterranean islands, North Africa, Turkey, Catalonia). Of the 52 refugia identified, 33 are situated in the western Mediterranean Basin and 19 in the eastern part. The locations of the phylogeographically defined refugia are significantly associated with the 10 regional hotspots of plant biodiversity, with 26 of these refugia (i.e. 50%) occurring within the hotspots. Main conclusions The locations of refugia are determined by complex historical and environmental factors, the cumulative effects of which need to be considered because they have occurred since the Tertiary, rather than solely during the last glacial period. Refugia represent climatically stable areas and constitute a high conservation priority as key areas for the long‐term persistence of species and genetic diversity, especially given the threat posed by the extensive environmental change processes operating in the Mediterranean region. The refugia defined here represent ‘phylogeographical hotspots’; that is, significant reservoirs of unique genetic diversity favourable to the evolutionary processes of Mediterranean plant species.     

Are invasive species drivers of native species decline or passengers of habitat modification? A case study of the impact of the common myna (Acridotheres tristis) on Australian bird species

Habitat modification and invasive species are significant drivers of biodiversity decline. However, distinguishing between the impacts of these two drivers on native species can be difficult. For example, habitat modification may reduce native species abundance, while an invasive species may take advantage of the new environment. This scenario has been described as the driver‐passenger model, with ‘passengers’ taking advantage of habitat modification and ‘drivers’ causing native species decline. Therefore, research must incorporate both habitat modification and invasive species impact to successfully investigate native species decline. In this paper, we used the common myna (Acridotheres tristis) as a case study to investigate the driver‐passenger model. We investigated changes in bird abundance, over 2 years, in relation to different habitat types and common myna abundance. We hypothesized that the common myna is both a passenger of habitat change and a driver of some bird species decline. Our results indicated that the abundance of many native species is greater in high tree density nature reserves, while the common myna was uncommon in these areas. Common myna abundance was almost three times higher in urban areas than nature reserves and declined rapidly as tree density in nature reserves increased. Our findings indicated that the common myna is primarily a passenger of habitat change. However, we also observed negative associations between common myna abundance and some bird species. We stress the importance of simultaneously investigating both invasive species impact and habitat modification. We suggest habitat restoration could be a useful tool for both native species recovery and invasive species control. Understanding the drivers of native species decline will help inform impact mitigation and direct further research.