长江流域水稻根际芽孢杆菌属固氮菌株的分离与鉴定

生物固氮资源的研究、开发和利用有利于发展持续农业,水稻田的氮素肥力比一般旱地高得多,活跃的生物固氮被认为是主要因素之一.苏宝林、崔宗均等系统地研究了我国北方稻区的固氮菌资源,分离鉴定出8属18种共35株固氮菌.在此基础上,我们对长江流域水稻根际异养固氮菌资源进行了系统研究.本文报道芽孢杆菌属(Bacillus)固氮菌株分离与鉴定的结果.     

北京地区水稻根际联合固氮菌的分离鉴定及其固氮酶活性的研究

从北京地区16个水稻品种的根际分离筛选出两株固氮酶活性较高的菌株D-12和D-25。对这两个菌株进行了分类鉴定和固氮酶活性的测定。根据形态特征和理化特性的测定,菌株D-12属于肺炎克雷伯氏菌(Klebsiella pneumoniae),菌株D-25类似于克雷伯氏菌但又有区别,因此暂放在胁杆菌科(Enterobacteriaceae)。两个菌株均在厌氧条件下固氮酶活性最高。在Hill's无氮蔗糖培养基中30℃条件下,其固氮酶活性的高峰出现在第16至第18小时。     

耐氨固氮菌在水稻根际的存活时间

耐氮固氮菌接种水稻后,能够附着秧苗根系移动而迁移,其数量随时间增长逐渐减少,耐氨固氮菌在水稻根际存活时间早造为７—８周,晚造５—８周．它们在水稻根际附近的泥土中存在时间较短,为５周左右。初步测定结果表明,当水稻根际有耐氨固氮菌存在时,接种耐氨固氮菌的水稻根际乙炔还原活性比对照高１－２倍。     

对小麦根际联合固氮菌增产效应的研究

小麦根际联合固氮菌是一种新型的微生物增产菌剂,经全国各地广泛试验与示范,已表现出了明显的增产效果。为证实其在我市春季生产上的增产效应,为大面积推广应用提供科学依据,我们于1990年引进该菌剂并开展了其对春小麦生长发育的影响及增产效应的研究,同时,对作用机理进行了初步探讨,现将结果报告如下。     

阿尔山不同时期落叶松根际土壤固氮菌的多样性研究

利用传统的细菌分离培养,结合16S rDNA序列分析等方法,对阿尔山地区不同时期落叶松根际可培养固氮菌群落的多样性进行分析,以揭示落叶松根际固氮菌的多样性及群落结构的季节变化规律,为森林生态系统的可持续发展提供理论依据。结果显示:(1)从阿尔山落叶松根际土壤中共计分离纯化细菌菌株112株,分属于14属41种,包括假单胞菌属、伯克氏菌属、根瘤菌属、叶杆菌属、节杆菌属、类芽孢杆菌属、沙雷菌属、欧文菌属、短小杆菌属、芽孢杆菌属、肠杆菌属、不动杆菌属、柄杆菌属、红球菌属;其中优势菌群为假单胞菌属,次优势菌群为叶杆菌属、伯克氏菌属和节杆菌属。(2)季节变化对落叶松固氮菌群的变化有显著影响,表现为4月份和10月份最优势类群为γ-变形菌纲(γ-proteobacteria)中的假单胞菌属,6月份和8月份的最优势类群相同,但组成有所差别,其中6月份优势菌群包括假单胞菌属、短小杆菌属、红球菌属、节杆菌属,8月份的优势菌群为假单胞菌属、不动杆菌属、肠杆菌属、短小杆菌属、红球菌属和节杆菌属。(3)不同时期的物种均匀度指数(McIntosh index)差异显著,8月份最大,4月份最小,变化范围在0.83～1.164之间;物种丰富度指数(Shannon-Wiener index) 6月份和8月份显著高于4月份和10月份;优势度指数(Simpson index) 4月份和10月份显著高于6月份和8月份。研究表明,阿尔山地区落叶松根际微生物的多样性较高,群落相对复杂,分离的14个菌属多为根际促生菌,且不同时期固氮菌的群落组成受季节的影响明显。     

元阳梯田地方水稻品种根部内生菌及根际微生物的分离与鉴定

采用组织分离法和土壤稀释涂板法,对元阳哈尼梯田2个地方品种‘月亮谷’和‘红脚老粳’的根部内生细菌及根际土壤细菌进行了分离,研究元阳梯田传统水稻品种特殊的内生菌组成.结果表明: 试验共得到399个菌株.经形态特征及生理生化鉴定,月亮谷根部和其根际土壤分别分离到8和5个属,其中5个属是共有的;红脚老粳的根部和其根际土壤中分别分离到10和7个属,其中6个属是共有的.经分子生物学鉴定,月亮谷根部分离到11个种和5个属,根际土壤分离到8个种和4个属,其中5个种和4个属是共有的;红脚老粳根部分离到9个种和5个属,根际土壤分离到10个种和3个属,其中4个种和2个属是共有的.通过分子生物学鉴定,大部分菌株都可以鉴定到种,而通过形态及生理生化特性只能初步鉴定到属,但两种方法在属层次上的鉴定结果基本一致.元阳地方水稻根部内生细菌及根际土壤细菌具有一定的种属同源性与特异性.     

一株根际放线菌的分离鉴定及其生物活性初探

从四川重庆药用植物蒿本根际土中分离到一株放线菌I06-02658,该菌株的发酵产物具有Caspase7抑制活性。菌株I06-02658在供试培养基上生长良好,形成丰富的基内菌丝,颜色从乳白到肉粉。在部分供试培养基上形成丰富的气生菌丝,产生浅黄至浅粉色可溶性色素。系统发育、化学分类特征、形态特征、生理生化特性等分析表明菌株I06-02658是糖霉菌属(Glycomyces)的一个菌株。     

水稻根际联合固氮细菌的研究

从我国南方水稻根部分离到3株氧化型革兰氏阴性细菌,编号为A1601,A1701和A1702。经15N示踪实验证明,它们均有较高的固氮能力。在无氮培养基中加入少量稻根浸出液进行培养后,可使固氮酶活性明显提高。根据菌株的形态和生理生化等特征鉴定,3株菌均为产孽菌属的细菌,分别为争论产碱菌(Alcaligenes paradoxus A1601),反硝化产碱蔺木糖氧化亚种(Alcaligenes denitrificans subsp.xylosoxydons A1701)和反硝化产碱菌反硝化亚种(Alcaligenes denitridicans subsp.denitrificans A1702)。这是继粪产碱菌(Alcaligenesfaecalis)之后,发现的产碱菌属中另外3株未见报道的固氮细菌。     

陈皮中微生物的分离与鉴定

摘要:【目的】陈皮保存的时间越长即陈皮越老其药用功效越显著。本工作拟从7年陈皮中分离有益微生物,并制成相应的微生物产品,应用于高品质耐储存陈皮的生产。【方法】以7年陈皮为材料,用4 种培养基分离微生物;采用SDS-PAGE全细胞蛋白电泳和IS-PCR指纹图谱对所分离到的微生物进行聚类分析,再选取每个类群的代表菌株进行分子系统发育分析及生理生化鉴定。【结果】从7年陈皮中分离、纯化23株细菌,但没有分离到真菌与放线菌。23株细菌聚为4个类群,其中类群I属于芽孢杆菌属(Bacillus),类群II、类群III、类群IV 属于类芽孢杆菌属(Paenibacillus)。【结论】4个类群中只有类群II代表菌株cp20具有明显的柠檬酸盐利用能力,在陈皮的试验制作过程中具有防腐耐储存作用。     

Isolation and identification of N2-fixing microorganisms from the rhizosphere of Capparis spinosa (L.)

Four bacterial strains, Pseudomonas stutzeri var. mendocina, Comamonas sp., Agrobacterium tumefaciens biovar. 2 and Sphingobacterium sp., isolated from the rhizosphere of wild-grown caper (Capparis spinosa L.) plants were able to fix N₂ as shown by their growth in nitrogen-free medium and by the acetylene reduction test. P. stutzeri var. mendocina and Comamonas sp. contained DNA homologous to the Klebsiella pneumoniae M5a1 nifHDK genes. No hybridization was found with total DNA from either A. tumefaciens biovar. 2 or Sphingobacterium sp. using nifHDK probes from either K. pneumoniae or Rhizobium meliloti.     

Isolation and gene quantification of heterotrophic N2-fixing bacterioplankton in the Baltic Sea

Cyanobacteria are regarded as the main N(2)-fixing organisms in marine waters. However, recent clone libraries from various oceans show a wide distribution of the dinitrogenase reductase gene (nifH) originating from heterotrophic bacterioplankton. We isolated heterotrophic N(2)-fixing bacteria from Baltic Sea bacterioplankton using low-nitrogen plates and semi-solid diazotroph medium (SSDM) tubes. Isolates were analysed for the nitrogenase (nifH) gene and active N(2) fixation by nested polymerase chain reaction (PCR) and acetylene reduction respectively. A primer-probe set targeting the nifH gene from a gamma-proteobacterial isolate, 97% 16S rDNA similarity to Pseudomonas stutzeri, was designed for measuring in situ dynamics using quantitative real-time PCR. This nifH gene sequence was detected at two of 11 stations in a Baltic Proper transect at abundances of 3 x 10(4) and 0.8 x 10(3) copies per litre seawater respectively. Oxygen requirements of isolates were examined by cultivation in SSDM tubes where oxygen gradients were determined with microelectrodes. Growth, and thereby N(2) fixation, was observed as horizontal bands formed at oxygen levels of 0-6% air saturation. The apparent microaerophilic or facultative anaerobic nature of the isolates explains why the SSDM approach is the most appropriate isolation method. Our study illustrates how combined isolation, functional analyses and in situ quantification yielded insights into the oxygen requirements of heterotrophic N(2)-fixing bacterioplankton isolates, which were confirmed to be present in situ.     

新疆盐碱地土壤耐盐芽胞杆菌的分离和鉴定

为了开发利用新疆盐碱地的耐盐菌资源,从该盐碱地土样中分离并纯化出11株耐盐能力较高的菌株,并从形态特征和16S rDNA序列分析对这些菌株进行鉴定。结果表明,11个菌株均为产芽胞,革兰氏阳性细菌。通过对这11个菌株的16S rDNA进行测序和同源性比较,发现它们与芽胞杆菌的相似性均达到99%。因此,这些菌株被鉴定为Bacillus sp.。11株菌均不能在NaCl质量浓度大于220 g/L条件下生长,属于中度耐盐菌株。耐盐基因的PCR扩增结果表明,只有NYT21、23、25、27、29等5株菌株含有pro耐盐基因,暗示这些耐盐芽胞杆菌具有不同的耐盐机制。     

Photoproduction of amino acids by mutant strains of N2-fixing cyanobacteria

Summary Mutant strains of the N₂-fixing cyanobacterium bacterium Anabaena variabilis resistant to 6-fluorotryptophan or to ethionine were isolated. Many of these strains liberated amino acids into their media in the absence of 6-fluorotryptophan and ethionine. Nitrogenase activity was higher in mutant strains than in the parent strain. Mutant strains were immobilised in calcium alginate and sustained photoproduction of amino acids has been demonstrated.Abbreviations ETH ethionine - FT 6-fluorotryptophan - Hepes 4-(2-hydroxyethyl)-1, piperazine ethanesulphonic acid - PEP phosphoenolpyruvate - DAHP 3-deoxy-d-arabinoheptulosonate 7-phosphate - chl a chlorophyll a     

Isolation and identification of Bacillus sphaericus strains pathogenic for mosquito larvae

Three selective media for the isolation of Bacillus sphaericus have been compared. BATS medium and a formulation employing adenosine as the principal carbon source were the most effective for the recovery of spores of strain 1593. Anthranilic acid as the principal carbon source was less efficient. Eighty-four strains were isolated from mud samples using these media and were identified by computer. Identifications were confirmed for representative strains using DNA sequence homology. Most were B. sphaericus sensu stricto or members of an unnamed group. However, one strain (BSE 18) was identified as the DNA homology group IIB and this organism was found to be highly toxic toward larvae of Culex pipiens. Southern hybridization of BSE 18 DNA to a probe prepared from the cloned toxin gene from strain 1593 revealed that BSE 18 contained a typical gene for the 41.9-kDa toxin.     

一株珊瑚礁-海草床复合生态系统固氮菌的分离与鉴定

三亚珊瑚礁自然保护区部分珊瑚礁退化后逐渐演替为以泰来藻(Thalassia hemprichii)为优势种的海草床群落,采用选择性无氮培养基从泰来藻植株的根际,分离得到一株固氮菌,编号为G33-1,经形态学、生理生化鉴定和16SrDNA及固氮基因nifH的序列分析,初步鉴定为成团泛菌(Pantoea agglomerans)。该菌为革兰氏阴性菌,以周生鞭毛运动,呈直杆状,菌落圆形,半透明乳白色,比较湿润,有光泽,直径约1mm,低凸,光滑,边缘比较整齐。最适培养条件为:氯化钠浓度25‰,生长温度为37°C,起始pH值为8。与成团泛菌标准菌株(ATCC27155TM)相比较,在碳源利用、精氨酸双水解、苯丙氨酸脱胺酶、鸟氨酸脱胺酶、以及生长温度和盐度等方面都具有较高的相似性,以16SrDNA为基础构建的系统进化树分析结果,表明其与成团泛菌属Pantoeaag-glomeransWAB1870进化距离最近,相似性大于99%。此外,利用乙炔还原法对固氮活性进行测定,其具有较高的固氮活性,达299.16nmolC2H2/(mL.h)。     

Natural 15N abundance of presumed N2-fixing and non-N2-fixing plants from selected ecosystems

Summary The ¹⁵N/¹⁴N ratios of plant and soil samples from Northern California ecosystems were determined by mass spectrometry. The ¹⁵N abundance of 176 plant foliar samples averaged 0.0008 atom % ¹⁵N excess relative to atmospheric N₂ and ranged from-0.0028 to 0.0064 atom % ¹⁵N excess relative to atmospheric N₂. Foliage from reported N₂-fixing species had significantly lower mean ¹⁵N abundance (relative to atmospheric N₂ and total soil N) and significantly higher N concentration (% N dry wt.) than did presumed non-N₂-fixing plants growing on the same sites. The mean difference between N₂-fixing species and other plants was 0.0007 atom % ¹⁵N. N₂-fixing species had lower ¹⁵N abundance than the other plants on most sites examined despite large differences between sites in vegetation, soil, and climate. The mean ¹⁵N abundance of N₂-fixing plants varied little between sites and was close to that of atmospheric N₂. The ¹⁵N abundance of presumed non-N₂-fixing species was highest at coastal sites and may reflect an input of marine spray N having relatively high ¹⁵N abundance. The ¹⁵N abundance of N₂-fixing species was not related to growth form but was for other plants. Annual herbaceous plants had highest ¹⁵N abundance followed in decreasing order by perennial herbs, shrubs, and trees. Several terrestrial ferns (Pteridaceae) had ¹⁵N abundances comparable to N₂-fixing legumes suggesting N₂-fixation by these ferns. On sites where the ¹⁵N abundance of soil N differs from that of the atmosphere, N₂-fixing plants can be identified by the natural ¹⁵N abundance of their foliage. This approach can be useful in detecting and perhaps measuring N₂-fixation on sites where direct recovery of nodules is not possible.     

Estimation of N2 fixation based on differences in the natural abundance of 15N among freshwater N2-fixing and non-N2-fixing algae

The hypothesis that small mammal burrows can increase the amount of water infiltrating into the soil profile was tested. The amount of water added to the soil profile from spring recharge in areas adjacent to ground squirrel (Spermophilus townsendii and S. elegans) burrows was compared to nearby areas without burrows. Recharge amounts in burrow areas were significantly higher than nonburrow areas. An average of 21% more of the winter precipitation infiltrated into the soil near burrows. The amount of recharge was also found to be positively related to burrow density. Burrows also affected the distribution of the recharge by adding significantly more water to the deeper portions (>50 cm) of the soil profile.     

Frankia in the rhizosphere of nonhost plants: A comparison with root-associated N2-fixing Enterobacter,Klebsiella and Pseudomonas

Bacterial growth in the rhizosphere and resulting changes in plant growth parameters were studied in small aseptic seedlings of birch (Betula pendula and B. pubescens) and grasses (Poa pratensis and Festuca rubra). The seedlings were inoculated with three Frankia strains (Ai1a and Ag5b isolated from native Alnus root nodules and Ai17 from a root nodule induced by soil originating from a Betula pendula stand), and three associative N₂-fixing bacteria (Enterobacter agglomerans, Klebsiella pneumoniae and Pseudomonas sp., isolated from grass roots). Microscopic observations showed that all the Frankia strains were able to colonize and grow on the root surface of the plants tested without addition of an exogenous carbon source. No net growth of the associative N₂-fixers was observed in the rhizosphere, although inoculum viable counts were maintained over the experimental period. Changes in both the biomass and morphology of plant seedlings in response to bacterial inoculation were recorded, which were more dependent on the plant species than on the bacterial strain.