Natural selection, fitness entropy, and the dynamics of coevolution

The coevolutionary dynamics of interacting populations were studied by combining continuous time Lotka-Volterra models of population growth with single-locus genetic models of weak selection. The effects of natural selection on population growth were evaluated using Ginzburg's fitness entropy function as a measure of the deviation of a population's initial allele frequencies from their polymorphic equilibrium values. This entropy measure was used to relate the dynamics of a community composed of evolving populations to the dynamics of a "reference community" whose populations are initially in genetic equilibrium. Specifically, a quantity called the "selective difference area" was defined as the total difference between the population size trajectories of a reference and evolving population. The selective difference area represents the amount of extra life a species would realize if the entire community were at genetic equilibrium. It was shown that this selective difference area is a simple linear function of the initial fitness entropies of each species. This prediction is independent of the strength of selection and holds for any arbitrary set of initial population densities. Numerical examples were presented to illustrate the results. Under the assumption of weak selection, a generalization for arbitrary population growth models was outlined.     

Sexual selection, natural selection and the evolution of dimorphic coloration and ornamentation in agamid lizards

Both sexual selection and natural selection can influence the form of dimorphism in secondary sexual traits. Here, we used a comparative approach to examine the relative roles of sexual selection and natural selection in the evolution of sexually dimorphic coloration (dichromatism) and ornamentation in agamid lizards. Sexual dimorphism in head and body size were used as indirect indicators of sexual selection, and habitat type (openness) as an index of natural selection. We examined separately the dichromatism of body regions "exposed to" and "concealed from" visual predators, because these body regions are likely to be subject to different selection pressures. Dichromatism of "exposed" body regions was significantly associated with habitat type: males were typically more conspicuously coloured than females in closed habitats. By contrast, dichromatism of "concealed" body regions and ornament dimorphism were positively associated with sexual size dimorphism (SSD). When we examined male and female ornamentation separately, however, both were positively associated with habitat openness in addition to snout-vent length and head SSD. These results suggest that natural selection constrains the evolution of elaborate ornamentation in both sexes as well as sexual dichromatism of body regions exposed to visual predators. By contrast, dichromatism of "concealed" body regions and degree of ornament dimorphism appear to be driven to a greater degree by sexual selection.     

Index of opportunity for natural selection among the Gowdas of Kodagahalli village,Karnataka, India

BACKGROUND:

In order to understand how selection is operating in the Gowda population, the index of opportunity for selection was calculated and the present findings were compared with some related findings from other South Indian (SI) populations.

MATERIALS AND METHODS:

Crow (1958) and the modified method by Johnston and Kensinger (1971) were used for the present purpose.

RESULTS AND DISCUSSION:

The index of total selection intensity (I) was found to be moderate taking into consideration the range for many Indian populations. Considering certain differences in fertility and mortality heritable, it appears that natural selection play an important role in shaping the genetic constitution of the Gowda population. Analysis of data indicates that the index due to fertility seems to contribute more towards selection than mortality. This trend might be because of better living condition and health-care system among the Gowdas which have a positive impact on the lower contribution of mortality for the evolution mechanism of the Gowda population through natural selection.     

The Sexual Cascade and the Rise of Pre-Ejaculatory (Darwinian) Sexual Selection,Sex Roles,and Sexual Conflict

After brief historic overviews of sexual selection and sexual conflict, I argue that pre-ejaculatory sexual selection (the form of sexual selection discussed by Darwin) arose at a late stage in an inevitable succession of transitions flowing from the early evolution of syngamy to the evolution of copulation and sex roles. If certain conditions were met, this “sexual cascade” progressed inevitably, if not, sexual strategy remained fixed at a given stage. Prolonged evolutionary history of intense sperm competition/selection under external fertilization preceded the rise of advanced mobility, which generated pre-ejaculatory sexual selection, followed on land by internal fertilization and reduced sperm competition in the form of postcopulatory sexual selection. I develop a prospective model of the early evolution of mobility, which, as Darwin realized, was the catalyst for pre-ejaculatory sexual selection. Stages in the cascade should be regarded as consequential rather than separate phenomena and, as such, invalidate much current opposition to Darwin–Bateman sex roles. Potential for sexual conflict occurs throughout, greatly increasing later in the cascade, reaching its peak under precopulatory sexual selection when sex roles become highly differentiated.Sexual selection and sexual conflict are vast fields in evolutionary biology; when possible, here, I refer to reviews. I begin with brief general historic overviews of sexual selection and sexual conflict; more detail can be found in Andersson (1994), Simmons (2001), Chapman et al. (2003), and Arnqvist and Rowe (2005). Much of the current state of the field of sexual conflict is covered in this collection.My principal aim, however, is to outline how sexual selection and sexual conflict have changed through evolutionary time, from mostly gamete competition in early unicellular eukaryotes, intense sperm competition in ancestral sessile and relatively immobile organisms, to both pre-ejaculatory (Darwinian) and postejaculatory sexual selection. These transitions in the evolution of sexual strategy arise as logical consequences whenever certain successive conditions are met, and together form what may be termed the “sexual cascade.”     

Computer Simulation of the Joint Evolution of the Patterns of Polygenes, Transposable Elements, and Origin Identity Labels: Stabilizing Selection

A computer model of the populations dynamics of the patterns of polygenes, transposable elements (TEs), and origin identity labels (OILs) in the course of stabilizing selection for an additive quantitative trait (with the target value being 0.4 of the maximum) was analyzed. It was demonstrated that the final plateaus of the trait value and the frequencies of the active values of polygenes are reached rapidly, namely, within five to seven generations (the effective selection period). The inbreeding coefficient during this period also grows rapidly and then gradually increases eventually reaching 0.7. The inbreeding coefficient reaches plateau (at 1.0) only in generations 300–350, which suggests the effect of gene drift. Dendrograms of the patterns of polygenes, TEs, and OILs were constructed for all generations. By generation 100 of selection, the final patterns of TEs and OILs were not formed completely. Fixations and losses, especially those of the OIL pattern, were delayed. In general, however, the population heterogeneity with respect to the patterns studied does not stabilize. This heterogeneity decreases the case of stabilizing selection, although more slowly than in the cases of positive and negative selections.     

Sexual selection at varying population densities in male field crickets,Gryllus veletis andG. pennsylvanicus

Male field crickets call and attract females or they silently search for females in the vicinity of calling males. At high population densities, fewer calling sites are available, defense of calling sites is costly, and an increased proportion of matings should result from searching behavior. To test these predictions, individually marked field crickets, Gryllus veletisand G. pennsylvanicus,were observed for 10 h nightly in large outdoor arenas at relatively high and low densities (2020 and 55, males and females). Data were gathered on body weight, calling duration, movement, and mating frequency for individual crickets. These observations showed that variance in male mating success was significantly greater at a low density in G. pennsylvanicus,and calling duration correlated with mating success at this density. Direct selection on a trait was estimated as the partial regression coefficient (selection gradient, ) and the total selection was estimated (direct and indirect selection on correlated traits) as the covariance (standardized intensity of selection, s) of the trait on the relative mating success. Direct selection favored increased movement at a high density in G. veletis,and direct and total selection favored increased calling duration at a low density in G. pennsylvanicus.Most other comparisons were not statistically significant. The data are discussed in terms of density-dependent fluctuations in sexual selection on correlated male traits.     

江西桃红岭自然保护区夏季梅花鹿对生境的选择性

2005年6-8月在江西桃红岭自然保护区对夏季梅花鹿的生境选择性进行了初步研究。结果表明：梅花鹿选择灌丛和灌草丛、郁闭度较低、灌木盖度较小、食物丰富度高、阴坡、中上坡位、坡度平缓、水源距离在100-400m、人为干扰距离〉800m和海拔高度〉300m的环境;对郁闭度〉80％和水源距离≤100m的环境表现为随机选择。     

Estimation of genetic variation in Japanese populations of the citrus red mite,Panonychus citri (McGregor) (Acari: Tetranychidae) on the basis of esterase allele frequencies

The genetic differentiation in Panonychus citri (McGregor) due to selection by pesticides was analyzed in this study on the basis of allele frequencies of an esterase locus, -Estl. The analysis was performed on 11 local populations collected primarily from satsuma mandarin in Japan. Clear difference of the allele frequencies was found between southwestern (Kyûshû district) and other areas in Japan. The results strongly suggest that the selection by pesticides influences the allele frequency of -Estl. The differentiation was inferred to be a result of selection in citrus groves by pesticides, mainly organophosphate.     

Efficiency of multi-trait,indirect, and trait-assisted genomic selection for improvement of biomass sorghum

Key message

We compare genomic selection methods that use correlated traits to help predict biomass yield in sorghum, and find that trait-assisted genomic selection performs best.

Abstract

Genomic selection (GS) is usually performed on a single trait, but correlated traits can also help predict a focal trait through indirect or multi-trait GS. In this study, we use a pre-breeding population of biomass sorghum to compare strategies that use correlated traits to improve prediction of biomass yield, the focal trait. Correlated traits include moisture, plant height measured at monthly intervals between planting and harvest, and the area under the growth progress curve. In addition to single- and multi-trait direct and indirect GS, we test a new strategy called trait-assisted GS, in which correlated traits are used along with marker data in the validation population to predict a focal trait. Single-trait GS for biomass yield had a prediction accuracy of 0.40. Indirect GS performed best using area under the growth progress curve to predict biomass yield, with a prediction accuracy of 0.37, and did not differ from indirect multi-trait GS that also used moisture information. Multi-trait GS and single-trait GS yielded similar results, indicating that correlated traits did not improve prediction of biomass yield in a standard GS scenario. However, trait-assisted GS increased prediction accuracy by up to \(50\%\) when using plant height in both the training and validation populations to help predict yield in the validation population. Coincidence between selected genotypes in phenotypic and genomic selection was also highest in trait-assisted GS. Overall, these results suggest that trait-assisted GS can be an efficient strategy when correlated traits are obtained earlier or more inexpensively than a focal trait.

     

Selection on male size,leg length and condition during mate search in a sexually highly dimorphic orb-weaving spider

Mate search plays a central role in hypotheses for the adaptive significance of extreme female-biased sexual size dimorphism (SSD) in animals. Spiders (Araneae) are the only free-living terrestrial taxon where extreme SSD is common. The gravity hypothesis states that small body size in males is favoured during mate search in species where males have to climb to reach females, because body length is inversely proportional to achievable speed on vertical structures. However, locomotive performance of males may also depend on relative leg length. Here we examine selection on male body size and leg length during mate search in the highly dimorphic orb-weaving spider Argiope aurantia, using a multivariate approach to distinguish selection targeted at different components of size. Further, we investigate the scaling relationships between male size and energy reserves, and the differential loss of reserves. Adult males do not feed while roving, and a size-dependent differential energy storage capacity may thus affect male performance during mate search. Contrary to predictions, large body size was favoured in one of two populations, and this was due to selection for longer legs. Male size was not under selection in the second population, but we detected direct selection for longer third legs. Males lost energy reserves during mate search, but this was independent of male size and storage capacity scaled isometrically with size. Thus, mate search is unlikely to lead to selection for small male size, but the hypothesis that relatively longer legs in male spiders reflect a search-adapted morphology is supported.     

SEX DIFFERENCES, SEXUAL SELECTION, AND AGEING: AN EXPERIMENTAL EVOLUTION APPROACH

Life-history (LH) theory predicts that selection will optimize the trade-off between reproduction and somatic maintenance. Reproductive ageing and finite life span are direct consequences of such optimization. Sexual selection and conflict profoundly affect the reproductive strategies of the sexes and thus can play an important role in the evolution of life span and ageing. In theory, sexual selection can favor the evolution of either faster or slower ageing, but the evidence is equivocal. We used a novel selection experiment to investigate the potential of sexual selection to influence the adaptive evolution of age-specific LH traits. We selected replicate populations of the seed beetle Callosobruchus maculatus for age at reproduction ("Young" and "Old") either with or without sexual selection. We found that LH selection resulted in the evolution of age-specific reproduction and mortality but these changes were largely unaffected by sexual selection. Sexual selection depressed net reproductive performance and failed to promote adaptation. Nonetheless, the evolution of several traits differed between males and females. These data challenge the importance of current sexual selection in promoting rapid adaptation to environmental change but support the hypothesis that sex differences in LH—a historical signature of sexual selection—are key in shaping trait responses to novel selection.     

Implications of a long-term, pollinator-mediated selection on floral traits in a generalist herb

Background and Aims

The phenotypic selection of a diverse insect assemblage was studied on a generalist plant species (Paeonia broteroi) in ten flowering seasons, with tests for whether visitor preferences for plants with larger flowers eventually translated into significant differences among plants in visitation rates, seed production, seed mass, seed germination and seedling survival.

Methods

Selection gradients were used to assess if selection on flower size contributed to explain differences in visitation rates, seed production and seed mass. First, independent analyses were carried out for each season; then for the ten season as a whole. Seedling emergence and survival were assessed by generalized linear models.

Key Results

Directional selection was found on flower size through visitation rates and seed production, and stabilizing selection through seed mass. Thus, larger flowers were more visited, and produced more, but lighter seeds, than smaller flowers. The results suggest a conflicting selection on flower size through seed number and size. Floral integration found in the study populations was larger than that in populations of a distant region. Finally, seed size did not influence seedling emergence and survival; thus, any advantages of seed size may be constrained under natural conditions before plants become reproductive individuals.

Conclusions

Plants with larger flowers may be benefited by producing more lighter seeds than fewer heavier ones, as they may contribute disproportionately to the seed bank, and have better chances that any descendant could eventually recruit. However, it seems unlikely that differences in flower size and integration found among populations in different regions could have been originated by rapid evolutionary change. First, because of the conflicting selection described; second, because of the remarkably low seedling survival found under natural conditions. Consequently, the influence of pollinator selection alone does not seem to explain differences in flower size and integration.Key words: Paeonia broteroi, long-term selection, conflicting selection, flower size, seed production, generalist pollination     

Sex ratio at birth in India, its relation to birth order, sex of previous children and use of indigenous medicine

Objective

Sex-ratio at birth in families with previous girls is worse than those with a boy. Our aim was to prospectively study in a large maternal and child unit sex-ratio against previous birth sex and use of traditional medicines for sex selection.

Main Outcome Measures

Sex-ratio among mothers in families with a previous girl and in those with a previous boy, prevalence of indigenous medicine use and sex-ratio in those using medicines for sex selection.

Results

Overall there were 806 girls to 1000 boys. The sex-ratio was 720∶1000 if there was one previous girl and 178∶1000 if there were two previous girls. In second children of families with a previous boy 1017 girls were born per 1000 boys. Sex-ratio in those with one previous girl, who were taking traditional medicines for sex selection, was 928∶1000.

Conclusion

Evidence from the second children clearly shows the sex-ratio is being manipulated by human interventions. More mothers with previous girls tend to use traditional medicines for sex selection, in their subsequent pregnancies. Those taking such medication do not seem to be helped according to expectations. They seem to rely on this method and so are less likely use more definitive methods like sex selective abortions. This is the first such prospective investigation of sex ratio in second children looked at against the sex of previous children. More studies are needed to confirm the findings.     

GEOGRAPHIC VARIATION, FREQUENCY-DEPENDENT SELECTION, AND THE MAINTENANCE OF A FEMALE-LIMITED POLYMORPHISM

A central problem in evolutionary biology is to understand how spatial and temporal variation in selection maintain genetic variation within and among populations. Brown anole lizards ( Anolis sagrei ) exhibit a dorsal pattern polymorphism that is expressed only in females, which occur in "diamond,""bar," and intermediate "diamond-bar" morphs. To understand the inheritance of this polymorphism, we conducted a captive breeding study that refuted several single-locus models and supported a two-locus mode of inheritance. To describe geographic variation in morph frequencies, we surveyed 13 populations from two major islands in The Bahamas. Morph frequencies differed substantially between major islands but were highly congruent within each island. Finally, we measured viability selection on each island to test two hypotheses regarding the maintenance of the polymorphism: (1) that spatial variation in selection maintains variation in morph frequencies between islands, and (2) that temporal variation in selection across years maintains variation within islands. Although bar females had relatively lower survival where they were rare, our data do not otherwise suggest that selection varies spatially between islands. However, diamond-bar females were subject to positive frequency-dependent selection across years, and the relative fitness of bar and diamond females alternated across years. We propose that this polymorphism is maintained by temporal variation in selection coupled with the sheltering of alleles via a two-locus inheritance pattern and sex-limited expression.     

Effect of inbreeding and selection for vigour and fertility on meiotic behaviour in autotetraploid job's tears,Coix lacryma-jobi L.

Summary Meiotic behaviour of the colchicine-induced raw autotetraploid (4n = 40) Job's tears (Coix lacryma-jobi L.) was compared with that of the tetraploid envolved from it through selection for vigour and fertility over a 4 year period and selfing of the selected plants for 3 generations. A significant decrease in quadrivalent frequency and an increase in bivalent frequency per cell, greater frequency of ring quadrivalents, more cells with regular separation of chromosomes and fewer cells with laggards at anaphase I, fewer irregularities in meiosis II, fewer pollen quartets with micronuclei and fewer aneuploids in the progenies were found in evolved tetraploid. The average chiasma frequency per cell, per quadrivalent and per bivalent were more or less the same in both tetraploids. All these facts indicate that inbreeding and selection for vigour and fertility have brought about a shift towards regular meiosis in the evolved tetraploid. The increase in fertility during the period of selection was not, however, significant, suggesting that its response to selection is slow, that a number of factors are probably involved and that, besides multivalents, genic factors also govern sterility in the tetraploid.     

Why the null matters: statistical tests,random walks and evolution

A number of statistical tests have been developed to determine what type of dynamics underlie observed changes in morphology in evolutionary time series, based on the pattern of change within the time series. The theory of the scaled maximum, the log-rate-interval (LRI) method, and the Hurst exponent all operate on the same principle of comparing the maximum change, or rate of change, in the observed dataset to the maximum change expected of a random walk. Less change in a dataset than expected of a random walk has been interpreted as indicating stabilizing selection, while more change implies directional selection. The runs test in contrast, operates on the sequencing of steps, rather than on excursion. Applications of these tests to computer generated, simulated time series of known dynamical form and various levels of additive noise indicate that there is a fundamental asymmetry in the rate of type II errors of the tests based on excursion: they are all highly sensitive to noise in models of directional selection that result in a linear trend within a time series, but are largely noise immune in the case of a simple model of stabilizing selection. Additionally, the LRI method has a lower sensitivity than originally claimed, due to the large range of LRI rates produced by random walks. Examination of the published results of these tests show that they have seldom produced a conclusion that an observed evolutionary time series was due to directional selection, a result which needs closer examination in light of the asymmetric response of these tests.     

Analysis of the Inheritance, Selection and Evolution of Growth Trajectories

We present methods for estimating the parameters of inheritance and selection that appear in a quantitative genetic model for the evolution growth trajectories and other "infinite-dimensional" traits that we recently introduced. Two methods for estimating the additive genetic covariance function are developed, a "full" model that fully fits the data and a "reduced" model that generates a smoothed estimate consistent with the sampling errors in the data. By decomposing the covariance function into its eigenvalues and eigenfunctions, it is possible to identify potential evolutionary changes in the population's mean growth trajectory for which there is (and those for which there is not) genetic variation. Algorithms for estimating these quantities, their confidence intervals, and for testing hypotheses about them are developed. These techniques are illustrated by an analysis of early growth in mice. Compatible methods for estimating the selection gradient function acting on growth trajectories in natural or domesticated populations are presented. We show how the estimates for the additive genetic covariance function and the selection gradient function can be used to predict the evolutionary change in a population's mean growth trajectory.     

Local adaptation, patterns of selection, and gene flow in the Californian serpentine sunflower (Helianthus exilis)

The traditional view of the species as the fundamental unit of evolution has been challenged by observations that in heterogeneous environments, gene flow may be too restricted to overcome the effects of local selection. Whether a species evolves as a cohesive unit depends critically on the dynamic balance between homogenizing gene flow among populations and potentially disruptive local adaptation. To examine this evolutionary balance between "global" gene flow and local selection, we studied northern Californian populations of Helianthus exilis, the serpentine sunflower, within a mosaic of contrasting serpentine and nonserpentine areas that differ considerably in soil chemistry and water availability. Local adaptation to riparian and serpentine habitats was studied in Helianthus exilis along with an analysis of gene flow patterns among populations within these habitats. Local adaptation was assessed in H. exilis during 2002 and 2003 using reciprocal transplant experiments at multiple locations within serpentine and riparian habitats. Effects of competition and germination date on the expression of local adaptation were also examined within the reciprocal transplant experiments. Local adaptation was detected in both years at the local site level and at the level of habitat. The analysis of the transplanted populations indicated that the patterns of selection differed considerably between riparian and serpentine sites. Differential survivorship occurred in serpentine habitats, whereas selection on reproductive output predominated in riparian habitats. Local adaptation was expressed only in the absence of competition. Local adaptation in terms of survivorship was most strongly expressed in treatments with delayed seed germination. Microsatellite markers were used to quantify population genetic parameters and examine the patterns of gene flow among sampled populations. Analysis of molecular markers revealed a system of population patches that freely exchange genes with each other. Strong selection seems to maintain ecotypic variation within this endemic sunflower species, while extensive gene flow among populations prevents local speciation between serpentine and riparian ecotypes.