The pH dependence of photosynthesis and elongation of Sphagnum squarrosum and S. girgensohnii in the Picea glehnii mire forest in Cape Ochiishi, north-eastern Japan

We investigated the pH dependence of the elongation of and photosynthesis by Sphagnum squarrosum and S. girgensohnii in a coastal Picea glehnii peat mire in Cape Ochiishi, north-eastern Japan. S. squarrosum grew in the acidic centre of the P. glehnii forest and showed the highest photosynthetic rate at pH = 3.8. S. girgensohnii grew at the margin of the P. glehnii forest and showed the maximum photosynthetic rate at pH = 7.2. Both species showed maximum growth at pH = 3.8. S. squarrosum elongated even at pH = 8.8, whereas S. girgensohnii stopped elongation at pH = 7.2. Although the pH dependence of photosynthesis by the Sphagnum species corresponded well to their distribution along the pH gradient from the centre to the margin of the P. glehnii forest, their short-term photosynthetic activity did not predict their long-term growth.     

Base mineral inflow in a remnant cool-temperate mire ecosystem

Kiushitou (42°28N, 141°9E) is a lowland mire located in a residential area of northern Japan. We examined the 2-D distribution of hydrochemical variables and their seasonal changes in relation to plant communities in an attempt to conserve the Sphagnum fen (Sphagnum subfulvum). This mire is gently sloping and the upper area consists of alder and ash forests, while the lower area is covered with fen communities. The grassy fen, Moliniopsis japonica, occurs throughout the lower area, whereas the Sphagnum fen is restricted to the southwest part of the mire. anova and canonical correspondence analysis revealed that the occurrence of Sphagnum fen is negatively correlated with Mg, Ca and electrical conductivity (EC). These variables indicated that water in the upper forest area contained a high concentration of minerals from the neighboring residential area. Seasonal changes in EC values revealed that the watercourse from a spring point in an upper corner to the lowest drainage ditch was divided into two, southwest and northeast, courses. Because the northeast-course spring water joins mineral-rich water flowing from a point at the upper margin, the northeast part of the lower area contains considerable Ca and Mg. In contrast, the mineral-poor spring water flowing into the southwest part of the mire ensures the survival of the Sphagnum fen. Thus, when we stop the supply of mineral-rich water from the upper margin the area of the Sphagnum fen will expand into the northeast part of the mire. Two-dimensional details of the hydrochemical regime clarify the impact of mineral inflow and the expansion mechanisms of these minerals.     

Peat and water chemistry at Big Run Bog,a peatland in the Appalachian mountains of West Virginia,USA

At Big Run Bog, aSphagnum-dominated peatland in the unglaciated Appalachian Plateau of West Virginia, significant spatial variation in the physical and chemical properties of the peat and in surface and subsurface (30 cm deep) water chemistry was characterized. The top 40 cm of organic peat at Big Run Bog had average values for bulk density of 0.09 g · cm^–3, organic matter concentration of 77%, and volumetric water content of 88%. Changes in physical and chemical properties within the peat column as a function of depth contributed to different patterns of seasonal variation in the chemistry of surface and subsurface waters. Seasonal variation in water chemistry was related to temporal changes in plant uptake, organic matter decomposition and element mineralization, and to varying redox conditions associated with fluctuating water table levels. On the average, total Ca, Mg, and N concentrations in Big Run Bog peat were 33, 15, and 1050 mol · g^–1, respectively; exchangeable Ca and Mg concentrations were 45 and 14 eq · g^–1 , respectively. Surface water pH averaged 4.0 and Ca⁺⁺ concentrations were less than 50 eq · L^–1 . These chemical variables have all been used to distinguish bogs from fens. Physiographically, Big Run Bog is a minerotrophic fen because it receives inputs of water from the surrounding forested upland areas of its watershed. However, chemically, Big Run Bog is more similar to true ombrotrophic bogs than to minerotrophic fens.     

The role of Eriophorum vaginatum in CH4 flux from an ombrotrophic peatland

Vegetation composition was found to be an important factor controlling CH₄ emission from an ombrotrophic peatland in the UK, with significantly greater (P < 0.01) CH₄ released from areas containing both Eriophorum vaginatumL. and Sphagnum, than from similar areas without E. vaginatum. Positive correlations were observed between the amount of E. vaginatum and CH₄ emission, with the best predictor of flux being the amount of below-ground biomass of this species (r ² = 0.93). A cutting experiment revealed that there was no significant difference (P > 0.05) in CH₄ flux between plots with E. vaginatum stems cut above the water table and plots with intact vegetation, yet there was a 56% mean reduction in CH₄ efflux where stems were cut below the water table (P < 0.05). The effect of E. vaginatum on CH₄ release was mimicked by the presence of inert glass tubes. These findings suggest that the main short-term role of E. vaginatum in the ecosystem is simply as a conduit for CH₄ release. The longer-term importance of E. vaginatum in controlling CH₄ fluxes through C substrate input was suggested by the positive correlation between the night-time CO₂ and CH₄ fluxes (r ² = 0.70), which only occurred when the vegetation was not senescent. This revised version was published online in June 2006 with corrections to the Cover Date.     

Reed die-back related to increased sulfide concentration in a coastal mire in eastern Hokkaido,Japan

A drastic decline of Phragmites australis was observed along the middle reaches of Ichibangawa River in Kiritappu Mire, eastern Hokkaido, Japan, during the last 50 years. In an area of ~30 ha, reed-sedge vegetation and alder forest have been replaced by bare soil and patches of salt marsh vegetation. A gradual increase in frequency of flooding by brackish water probably was the ultimate cause of the vegetation change. We measured redox potentials and oxygen and sulfide concentrations in soil profiles using needle electrodes. Measurements were carried out in areas where reed has disappeared and in sites where reed stands were still healthy. The concentration of selected ions in the surface water was also measured at various sites. Surface water in low-lying areas was clearly influenced by seawater. Very high sulfide concentrations were measured in bare peat sites (more than 600 mol l^–1), which exceeded P. australis tolerance 2 – 3 times. In a healthy reed zone adjacent to an area with poor fen vegetation, sulfide concentration in the rooting zone of Phragmites was also high (300–400 mol l^–1), particularly during the night. The fact that Phragmites in this zone was still healthy indicates that sulfide did not reach toxic levels in the direct vicinity of the roots. Sulfide that is produced in this area is probably fixed by iron, which is supplied through a continuous discharge of iron-rich groundwater. An increase in frequency of flooding by brackish water could be related to ongoing subsidence of this part of the Pacific coast which is located at the Kuril subduction zone. Sea level rise could also contribute to a stronger inflow of seawater into the mire system.     

Characteristics of nutrient dynamics in Lake Sagate,Japan, a shallow sand dune lake

We examined differences in digestibility and viability following gut passage through water penny larvae (Psephenus herricki) of Synedra ulna and Achnanthidium lanceoloatum, two common diatom taxa that differ in growth habit and autecological characteristics. Prior to the experiment, diatoms were cultured in Chu-10 media in petri plates to establish a monospecific biofilm to offer grazers. After collection, insects were left to clear their guts over night, allowed to graze for 3 hours on diatom biofilms, and then placed in vials over 1-mm mesh to defecate. Samples from source material and from insect feces were mounted in syrup media and the ratio of chloroplast-containing to empty diatom frustules was microscopically assessed. In addition, subsamples from source material and feces were sprayed onto agar plates prepared with Chu-10 and individual cells were mapped and tracked for 5 days to quantify reproduction. Cells of both S. ulna and A. lanceolatum taken from source material formed colonies on agar. Achnanthidium lanceolatum cells from insect feces also formed colonies, but with lower densities than those from source material. In contrast, none of the S. ulna cells tracked from fecal cultures formed colonies, and the percentage of S. ulna cells that were dead was significantly greater in feces relative to source material. Dead cell percentages of A. lanceolatum were also higher in feces relative to source material, but to a lesser degree than observed for S. ulna. These findings have potential implications for linking patterns of energy transfer in stream ecosystems and the structure and dynamics of benthic microalgal communities.     

Periodicity in growth,productivity, nutrient content and decomposition ofSphagnum recurvum var.mucronatum in a fen woodland

Summary Condition in the understory of aBetula-carr appeared to be favourable for the growth ofSphagnum recurvum. The estimates of annual productivity and nutrient accumulations forS. recurvum obtained in this wetland forest are in the high range of those reported for peatmosses. On an annual basis, the organic matter production, vegetative reproduction (forking), and accumulation of N, P and K were very much the same for a relatively dry and for a relatively wet year. Periodicity in growth and length increase of the plants, however, differed remarkably between these years, and fruiting was observed in the dry year only.S. recurvum was characterized by a distinct variation in nutrient concentrations both with time and with distance from the capitulum. Organic weight loss during breakdown ofS. recurvum in the wetland forest was low. Release of N, P and particularly K was larger than that of organic matter in decomposingS. recurvum. Nevertheless, a relatively large proportion of the original N and P stock remained associated with the peatmoss material after a 12 month decay period. Observations with the scanning electron microscope revealed that after a year the cells of deadS. recurvum were hardly damaged and only poorly colonized by microorganisms. The characteristics ofS. recurvum described here indicate its potency in directing succession in peatland forests.     

Principal components analysis and trend surface analysis of a small-scale pattern in a transition mire

Principal components analysis and trend surface analysis have been applied to a transition mire with the aim to characterize the vegetation pattern and reveal the major trends of variation. The first three PCA axes were ecologically interpretable, viz. the 1 st and 2nd as a complex soil moisture gradient and the 3rd axis as a gradient in the amount of peat in the soil. The ecological interpretability of the 1st axis of PCA after VARIMAX rotation, is unclear because some outlier samples caused a reorientation of the axis. TSA appeared to be useful for the clarification of joint patterns of species groups, which were major contributors to ordination axes in terms of component loadings. The smooth effect of TSA was briefly discussed in connection with the influence of extremes upon the outcoming trend structure. The use of four-variable TSA including a time series is emphasized for the study of spatial-temporal relations and ecological succession.     

Vegetation, landscape and human activity in Midland Ireland: mire and lake records from the Lough Kinale-Derragh Lough area, Central Ireland

A high-resolution pollen record for the Holocene has been obtained from Derragh Bog, a small raised mire located on a peninsula in Lough Kinale-Derragh Lough, in Central Ireland as part of the Discovery Programme (Ireland) Lake Settlements Project. The data are compared with two lower resolution diagrams, one obtained from Derragh Lough and one from adjacent to a crannog in Lough Kinale. The general trends of vegetation change are similar and indicate that landscape-scale clearance did not occur until the Medieval period (ca. a.d. 800–900). There are, however, significant differences between the diagrams due primarily to core location and taphonomy, including pollen source area. Only the pollen profile from Derragh Bog reveals an unusually well represented multi-phase primary decline in Ulmus ca. 3500–3100 b.c. (4800–4750¹⁴C b.p.) which is associated with the first arable farming in the area. The pollen diagram indicates a rapid, and almost complete, clearance of a stand of Ulmus with some Quercus on the Derragh peninsula, arable cultivation in the clearing and then abandonment by mobile/shifting late Neolithic farmers. Subsequently there are a number of clearance phases which allow the colonisation of the area by Fraxinus and are probably associated with pastoral activity. The pollen sequence from adjacent to a crannog in Lough Kinale shows clear evidence of the construction and use of the crannog for the storage of crops (Hordeum and Avena) whereas the Derragh Bog diagram and the diagram from Derragh Lough reflect the growth of the mire. This study reveals that in this landscape the record from a small mire shows changes in prehistoric vegetation caused by human agriculture that are not detectable in the lake sequences. Although in part this is due to the higher temporal resolution and more consistent and complete chronology for the mire, the most important factor is the closer proximity of the raised mire sequence to the dry land. However, the pollen sequence from adjacent to a crannog does provide detailed evidence of the construction and function of the site. It is concluded that in order to ascertain a complete picture of vegetation changes in a lowland shallow lake-dominated landscape, cores from both the lake and surrounding small mires should be analysed.     

Mycena auricoma,a new species ofMycena sectionRadiatae from Japan,andMycena spinosissima,a new record in Japan

Two lignicolous species ofMycena (Agaricales, Basidiomycetes) are described and illustrated from eastern, Japan:Mycena auricoma sp. nov., forming ephemeral coprinoid basidiomata and belonging to sectionRadiatae, was found on a dead fallen twig ofQuercus serrata. It appears to close to a Malaysian species,“Trogia” crinipelliformis. Mycena spinosissima in sectionSacchariferae, new to Japan, was collected from dead bark ofAphananthe aspera, a dead fallen inflorescence ofCryptomeria japonica, and a dead fallen twig ofQuercus serrata.     

Key variables controlling the vegetation of a cool-temperate mire in northern Japan

Abstract. In the cool-temperate Bibi Mire, Hokkaido, Japan, valley fens and flood-plain fens have quite different vegetation. The main variables controlling the vegetation were all hydrological: mean water level, water level fluctuation and surface water flow. Chemical factors such as electrical conductivity, dissolved oxygen and related peat decomposition were less important. The pH was about neutral and has little effect. The flood-plain fen developed under fluctuating water table conditions. The dominant species are Calamagrostis langsdotffii and Carex pseudocuraica. When temporal inundation occurs in the rainy or typhoon seasons, the submergence stimulates bud germination of the stoloniferous C. pseudocuraica, which can rapidly elongate its stolons upward. Some large floating peat mats occurred in the flood-plain fen zone. On these mats some Alnus japonica saplings establish and patches of alder forest can arise. Here the water level was higher than in the peripheral alder forest zone. The valley fen is dominated by Carex lasiocarpa var. occultans and/or C. limosa. It is formed under stable water table conditions in the inundated parts of the mire -where the non-inundated wet areas are dominated by alder trees. In the area where the surface water is flowing, these two fen sedges grow in deeper water since the high oxygen content is considered to compensate the flooding stress.     

Effects of food distribution on the habitat usage of a female brown bear Ursus arctos yesoensis in a beech-forest zone of northernmost Japan

The habitat usage of a female brown bear, Ursus arctos yesoensis L., was studied in relation to the distribution of food plants in a beech-forest zone of Hokkaido, Japan. The bears habitat usage was correlated with the distribution of the plant Angelica ursina (Rupt.) Maxim. in summer. In spring the bear preferred Petasites japonicus (Sieb. et Zucc.) Maxim. and Heracleum dulce Fisch., whose abundance did not differ significantly between Sasa–beech forests and coniferous forests. However, the bear spent more time in coniferous forests where its den site was located. In autumn, this bear preferred the plant Actinidia arguta (Sieb. et Zucc.) Planch. ex Mig., which was abundant in maple–linden forests, however, the bears habitat usage was not correlated with the distribution of A. arguta because it frequently returned to an overlapping area where A. arguta was scarce. Thus, the bears habitat usage depended on food distribution as well as on the location of the den site and the behavioral core area.     

Fusarium nisikadoi, a new species from Japan

A new species ofFusarium, F. nisikadoi, isolated fromPhyllostachys nigra var.henonis (bamboo) andTriticum aestivum (wheat) in Japan, is described, illustrated and discussed. This species is differentiated from other known species of the genus by the following characteristics: whitish colony color, long zigzag-like chains of 0–3(-5)-septate clavate conidia, intermixed with pyriform conidia, produced mostly from monophialides and rarely from polyphialides in the aerial mycelium, very long and slender sporodochial conidia, and no chlamydospores. The long chains of septate conidia are known only in this species of the genusFusarium. The conidiophores on the aerial mycelium sometimes proliferate sympodially. The species is tentatively placed in the form-sectionLiseola.     

Use of mires and food habits of sika deer in the Oze Area,central Japan

Sika deer Cervus nippon entered the Oze Area, a snowy area in central Japan, in the 1990s. The use of mires and the food habits of this species were studied in 1999 and 2000. Deer used the mires immediately after snow melted and did not use the mires in mid summer, although they did use them lightly in autumn. The summer food habits differed from those of the deer population living in Nikko in the lower area: non-Sasa graminoids and other monocotyledonous leaves occupied more (approximately 30%) of the feces in the former population, whereas Sasa nipponica, a dwarf bamboo, was the dominant food (60%) of the latter population. Seasonal changes in fecal composition in the Oze deer were that mire graminoids occupied a considerable portion of their food in spring (11.6%) and summer (17.0%), whereas the amount of dwarf bamboo increased in fall (26.0%). Despite the small size of the mires, Oze deer appear to prefer mires to forests. Nitrogen concentrations of the mire plants did not differ from those of the forest plants; however, foraging efficiency would be greater in the mires and this may explain the preference observed. Despite the small total biomass, leaf biomass of the mire was equivalent to that of the adjacent forest floor. In addition, biomass was concentrated near the ground, or the biomass concentration was greater than that of the forest floor.     

Pollen and macrofossil analyses of a unique peat remnant of the former extensive peat bogs in West Friesland,The Netherlands: a detailed record of coastal raised bog formation

Of the former extensive peat bog in West Friesland, only small, buried and often cutover remains are left, scattered over a wide region. The results of pollen and macrofossil analyses of the most complete peat profile found to date in this district is presented in this paper. The vegetation development during the final stage of marine sedimentation in the vicinity of the analysed profile is reconstructed in some detail, as well as the subsequent formation of the lower layers of the mire, including the ombrotrophic peat. Apart from these aspects, the study also contributes to our knowledge of the Holocene palaeogeography of the coastal region of the Netherlands.     

High abundance of planctomycetes in anoxic layers of a Sphagnum peat bog

The depth distribution of planctomycete abundance has been examined in six different sites of the Sphagnum peat bog Bakchar, Tomsk oblast, Russia. In situ hybridization of peat with the fluorescently labeled oligonucleotide probes PLA46 and PLA886, reported to be group-specific for representatives of the phylum Planctomycetes, revealed two distinct population maxima of these bacteria in all of the profiles examined. The first population maximum was detected in the uppermost, oxic layer of the bog profile, while the second maximum was located at a depth of 30 cm below the water table level. The population sizes of planctomycetes in the uppermost layer and at a depth of 30 cm were of the same order of magnitude and comprised 0.5–1.5 × 10⁷ and 0.4?0.7 × 10⁷ cells per g^?1 of wet peat, respectively. Only 25–30% of the total number of planctomycete cells in the anoxic layer could be detected if the probe PLA886, whose target specificity is restricted to taxonomically characterized aerobic planctomycetes of the genera Gemmata, Planctomyces, Pirellula, and Isosphaera, was used alone. Other planctomycete cells in this layer were detected only with the probe PLA46, which possesses a much wider scope. This suggests the affiliation of these organisms with a yet undescribed phylogenetic subgroup within the Planctomycetes.     

Efficient regeneration of <Emphasis Type="Italic">Sphagnum fallax</Emphasis> from isolated protoplasts

Summary While the in vitro clonal propagation of peat mosses (Sphagnaceae) in bioreactors has been established since the late 1980s, it has never been possible to regenerate Sphagnum species from isolated protoplasts, which is a key step towards the production of closely defined genetically modified clones. The present study describes an efficient protocol for protoplast isolation and regeneration of Sphagnum fallax. Protoplast survival rates of over 50% and regeneration rates of up to 20% were achieved by using excised capitulum buds as starting material and by co-cultivating Sphagnum protoplasts with protoplasts from a chlorophyll-deficient Solanum hybrid clone. Besides the effects of nutrient components and differential osmotic readjustment of the regenerant cell clusters, the interference of unique Sphagnum phenolics, sphagnum acid and hydroxybutenolide, with protoplast isolation efficiency is demonstrated.