Relative influence of size,connectivity and disturbance history on plant species richness and assemblages in fragmented grasslands

Questions: What is the relative influence of size, connectivity and disturbance history on plant species richness and assemblages of fragmented grasslands? What is the contribution of small fragments to the conservation of native species pool of the region? Location: Tandilia's Range, Southern Pampa, Argentina. Methods: Cover of plants was registered within 24 fragments of tall‐tussock grassland remnants within an agricultural landscape using modified Whittaker nested sampling. We analysed the influence of site variables related to disturbance history (canopy height, litter thickness) and fragment variables (size, connectivity) on species richness (asymptotic species richness, slope of the species–area curve) as well as on species assemblages by multiple regressions analysis and canonical correspondence analyses, respectively. Cumulative area was used for analysing whether small fragments or large fragments are more important to species diversity in the landscape. Results: Asymptotic species richness was significantly influenced by site variables, in particular by Paspalum quadrifarium's canopy height, but not by fragment variables. Species assemblages were also affected by site variables (12.2% of total variation), but no additional portion of the species assemblage variability was significantly explained by fragment size and connectivity. Sampling of several small fragments rendered more exotic and native species than sampling of few large fragments of the same total area. Conclusions: Our results agree with previous studies reporting low sensitivity of species diversity to size and isolation of grassland fragments in fragmented landscapes and high sensitivity of species diversity to local variables. The higher capture of regional native species pool by small grassland fragments than by few larger ones of equivalent accumulated area highlights the value of small fragments for conservation.     

Agricultural land use and black fly (Diptera,Simuliidae) species richness and species assemblages in tropical streams,Northeastern Thailand

Habitat degradation through agricultural land use is the major factor threatening lotic ecosystems. Although black flies are major components of these ecosystems, the impact of agricultural land use on species diversity and species assemblages has been largely ignored in tropical streams of the Oriental region. The objectives of this study are to examine patterns of species distribution and species richness and to compare black fly species richness and species assemblages in forest and agricultural streams in Thailand. A total of 143 collections were made from 70 stream sites between June 2007 and May 2008. Whereas 19 black fly species found in these collections were all found in forest sites, only 13 species were found in agricultural sites. High species richness was associated with larger, faster, and cooler streams with larger streambed particles and the presence of riparian trees. Logistic regression analyses revealed that stream size, velocity, and riparian vegetation are among the most important factors determining patterns of spatial distribution. The results are largely consistent with studies in other zoogeographic regions, suggesting the existence of general rules for black fly species distributions. Comparisons of the physicochemical conditions between forest and agricultural streams indicated that streams in agricultural areas are warmer, with higher conductivity and fewer riparian trees. Species richness was significantly higher in forest than in agricultural streams (t = 3.61, P < 0.001). Streams in forest areas were predominantly occupied by S. siamense (73%) but other species were also found at a relatively high frequency (>20%) of the sampling sites. In contrast, streams in agricultural areas were predominantly occupied by S. aureohirtum (>80%) among the sole black fly species at 27% of the sites. The results indicate that agricultural land use has a significantly detrimental impact on black fly diversity and species assemblages. Handling editor: D. Dudgeon     

Global richness patterns of venomous snakes reveal contrasting influences of ecology and history in two different clades

Recent studies addressing broad-scale species richness gradients have proposed two main primary drivers: contemporary climate and evolutionary processes (differential balance between speciation and extinction). Here, we analyze the global richness patterns of two venomous snake clades, Viperidae and Elapidae. We used ordinary least squares multiple regression (OLS) and partial regression analysis to investigate to what extent actual evapotranspiration (AET; summarizing current environmental conditions) and biogeographical regions (representing evolutionary effects) were associated with species richness. For viperids, AET explained 45.6% of the variance in richness whereas the effect of this variable for elapids was almost null (0.5%). On the other hand, biogeographic regions were the best predictors of elapid richness (56.5%), against its relatively small effect (25.9%) in viperid richness. Partial regressions also revealed similar patterns for independent effects of climate and history in both clades. However, the independent historical effect in Elapidae decreased from 45.2 to 17.8% when we excluded Australia from the analyses, indicating that the strong historical effect that had emerged for the global richness pattern was reflecting the historical process of elapid radiation into Australia. Even after excluding Australia, the historical signal in elapid richness in the rest of the globe was still significant and much higher than that observed in viperid richness at a global scale (2.7% after controlling for AET effects). Differences in the evolutionary age of these two clades can be invoked to explain these contrasting results, in that viperids probably had more time for diversification, generating richness responses to environmental gradients, whereas the pattern of distribution of elapid richness can be more directly interpreted in an evolutionary context. Moreover, these results show the importance of starting to adopt deconstructive approaches to species richness, since the driving factors of these patterns may vary from group to group according to their evolutionary history. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Species richness of marine Bryozoa in the continental shelf and slope off Argentina (south-west Atlantic)

Abstract.  A total of 246 marine bryozoan species was recorded within an area of the south-west Atlantic between 35° and 56°S, and between the coast of Argentina and 50°W. The distribution pattern of benthic stations surveyed during the most important cruises in the area shows that the sampling effort has been biased towards southern shelf areas off Santa Cruz and Tierra del Fuego, as well as around the Malvinas (Falkland) islands. The littoral zone, Patagonian gulfs and the continental shelf off Chubut, Río Negro and Buenos Aires state received less attention, and should be surveyed more intensively in the future. Only 2% of the species can be regarded as non-indigenous, all of them inhabiting biofouling communities in harbour environments. With the exception of some thoroughly surveyed localities, the number of species recorded for different areas of the coast, shelf and slope is estimated to be just a small fraction of the actual number of species present. A distinct diversity gradient was found, with species-rich stations located only in the southern shelf. Highest diversity occurred in shelf areas dominated by coarse sediments, and along a high-productivity shelf-break front. A remarkable decrease in species richness was found in inner and middle shelf areas off Chubut, Río Negro and Buenos Aires state. This pattern may be related to the Pacific origin of the Magellanic fauna, since the diversity of bryozoans is higher in the Pacific than in the Atlantic Ocean. The trend of species richness is, however, overemphasized by the fact that the least diverse faunistic assemblage occurs in areas where surveys have been relatively less frequent. An up-to-date checklist of species recorded for the study area is included.     

Patterns of herbivore species richness in Kenya and current ecoclimatic stability

The increased attention to biodiversity worldwide has stimulatedinterest in understanding biophysical factors associated with indicators ofbiodiversity such as species richness. Although levels of biodiversity may seemto be equivalent in different areas, high species richness may be caused byaccumulation of species over a long time in places where environmentalconditions remained stable and predictable. The advanced very high resolutionradiometer (AVHRR)–normalized difference vegetation index (NDVI) has beenestablished to be a good proxy for studying interannual climate variability aswell as regional drought condition. In this study, I examined the relationshipbetween large herbivore species richness and AVHRR–NDVI derivedclimatic-variability indices, interannual average NDVI and coefficient ofvariation of NDVI at a regional spatial scale in Kenya. Regions with a relativelylow coefficient of variation of NDVI and high interannual average NDVIcharacterize current ecoclimatic stability. By contrast, a high coefficient ofvariation of NDVI and relatively low interannual average NDVI characterizeecoclimatic instability (drought risk). Statistical analyses revealed that a highinterannual average NDVI increases species richness, whereas a high coefficient ofvariation of NDVI lowers species richness. This indicates that maximum numbers ofspecies are found in regions with current ecoclimatic stability. Understandingsuch relationships can help in explaining spatial distribution of speciesrichness and predicting global changes resulting from human impacts on theenvironment.     

Distribution pattern of groundfishes hooked along a row of setline in the shallower part of the continental slope in the Bering Sea 2 bathymetric difference in relative abundance in relation to distribution pattern

1. This report demonstrates the well-defined bathymetric distribution of relative abundance of groundfishes in relation to the distribution pattern conjectured from the records of catch along a row of setline with remarkably large variation in the settled depth (from shallower than 350 m to deeper than 700 m) observed around 58⁰ 18′ N and 175⁰ 28′ W on Aug. 24, 1962.
2. The results of the analyses are depicted in Fig. 1. It is found that halibut, true cod and Sebastodes sp. (or Menuke in Japanese) show sharp or abrupt decrease in the relative abundance in accordance with depth whereas sablefish and rattail increase sharply. Arrow toothed halibut and ray do not show any clear bathymetric change in relative abundance and Pacific ocean perch shows decrease in the density in accordance with the disparity in the depth from the 500 m isobath.
3. The patterns conjectured from this example are compared with either those shown in other reports, the results of the observations on other examples or general view of our fishermen. And many proofs to the high reliability and wide universality of the conjectured pattern of the first four species are found out. But, for the last three species, the present results differ more or less from the general view of our fishermen and the observations on other examples.
4. For the distribution pattern, most of groundfishes incline to show chance distribution in the shallower part of the continental slope (350 m to 700 m deep) and only the species showing sharp decrease in density with increase in the depth are distributed contagiously on the shallower bottom (not deeper than 450 m).

     

Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness

Species richness is a fundamental measurement of community and regional diversity, and it underlies many ecological models and conservation strategies. In spite of its importance, ecologists have not always appreciated the effects of abundance and sampling effort on richness measures and comparisons. We survey a series of common pitfalls in quantifying and comparing taxon richness. These pitfalls can be largely avoided by using accumulation and rarefaction curves, which may be based on either individuals or samples. These taxon sampling curves contain the basic information for valid richness comparisons, including category–subcategory ratios (species-to-genus and species-to-individual ratios). Rarefaction methods – both sample-based and individual-based – allow for meaningful standardization and comparison of datasets. Standardizing data sets by area or sampling effort may produce very different results compared to standardizing by number of individuals collected, and it is not always clear which measure of diversity is more appropriate. Asymptotic richness estimators provide lower-bound estimates for taxon-rich groups such as tropical arthropods, in which observed richness rarely reaches an asymptote, despite intensive sampling. Recent examples of diversity studies of tropical trees, stream invertebrates, and herbaceous plants emphasize the importance of carefully quantifying species richness using taxon sampling curves.     

高黎贡山种子植物物种丰富度沿海拔梯度的变化

物种丰富度沿海拔梯度的分布格局成为生物多样性研究的热点。为探讨中尺度区域物种丰富度沿海拔梯度的分布,本文以高黎贡山为研究对象,利用该地区的地方植物志资料,结合通过GIS生成的区域数字高程模型(DEM)数据,分析了该区域全部种子植物和乔木、灌木、草本三种生活型种子植物物种丰富度的垂直分布格局以及物种密度沿海拔梯度的变化特征。结果表明：(1)全部种子植物和不同生活型植物物种丰富度随着海拔的升高呈现先增加后减小的趋势,最大值出现在海拔1500—2000m的范围;(2)物种密度与海拔也呈现单峰曲线关系;(3)物种丰富度和物种密度分布格局的形成主要受海拔所反映的水、热状况组合以及物种分布的边界影响。     

The importance of plot size and the number of sampling seasons on capturing macrofungal species richness

The species-area relationship is an important factor in the study of species diversity, conservation biology, and landscape ecology. A deeper understanding of this relationship is necessary, in order to provide recommendations on how to improve the quality of data collection on macrofungal diversity in different land use systems in future studies, a systematic assessment of methodological parameters, in particular optimal plot sizes. The species-area relationship of macrofungi in tropical and temperate climatic zones and four different land use systems were investigated by determining the macrofungal species richness in plot sizes ranging from 100 m² to 10 000 m² over two sampling seasons. We found that the effect of plot size on recorded species richness significantly differed between land use systems with the exception of monoculture systems. For both climate zones, land use system needs to be considered when determining optimal plot size. Using an optimal plot size was more important than temporal replication (over two sampling seasons) in accurately recording species richness.     

Patterns in species richness and endemism of European freshwater fish

Aim  To analyse the patterns in species richness and endemism of the native European riverine fish fauna, in the light of the Messinian salinity crisis and the Last Glacial Maximum (LGM).
Location  European continent.
Methods  After gathering native fish faunistic lists of 406 hydrographical networks, we defined large biogeographical regions with homogenous fish fauna, based on a hierarchical cluster analysis. Then we analysed and compared the patterns in species richness and endemism among these regions, as well as species–area relationships.
Results  Among the 233 native species present in the data set, the Cyprinidae family was strongly dominant (> 50% of the total number of species). Seven biogeographical regions were defined: Western Peri-Mediterranea, Central Peri-Mediterranea, Eastern Peri-Mediterranea, Ponto-Caspian Europe, Northern Europe, Central Europe and Western Europe. The highest regional species richness was observed for Central Peri-Mediterranea and Ponto-Caspian Europe. The highest endemic richness was found in Central Peri-Mediterranea. Species–area relationships were characterized by high slope values for Peri-Mediterranean Europe and low values for Central and Western Europe.
Main conclusions  The results were in agreement with the 'Lago Mare' hypothesis explaining the specificity of Peri-Mediterranean fish fauna, as well as with the history of recolonization of Central and Western Europe from Ponto-Caspian Europe following the LGM. The results also agreed with the mechanisms of speciation and extinction influencing fish diversity in hydrographical networks. We advise the use of the seven biogeographical regions for further studies, and suggest considering Peri-Mediterranean Europe and Ponto-Caspian Europe as 'biodiversity hotspots' for European riverine fish.     

Patterns of composition and species richness of crustaceans and aquatic insects along environmental gradients in Mediterranean water bodies

Differences in the dynamics of ecological processes between Mediterranean and colder temperate aquatic systems could imply different patterns in faunal communities in terms of composition and biodiversity (i.e. species richness and rarity). In order to identify some of these patterns the crustacean and aquatic insect composition and biodiversity of four water body types, classified according to their salinity and water permanence, were compared. Moreover, the relationships between species richness and water, pond and landscape variables were analysed. A total number of 91 water bodies located throughout Catalunya (NE Iberian Peninsula) were sampled. Three species assemblages were observed: one for permanent freshwaters, another for temporary freshwaters, and a third one for saline waters (SW), since permanent and temporary saline water bodies had similar composition. Differences in salinity were associated with proportion of crustaceans versus insects and with singularity. Thus, saline ponds had a higher proportion of crustaceans, and lower values of singularity. Conductivity was significantly related to total (crustaceans plus insects) richness, and also related to insect richness. The main difference between the models obtained for crustacean species richness and insect species richness is the significance of landscape variables in the latter, and this fact could be related to the different dispersion types of these two faunal groups: active for insects versus passive for crustaceans. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users. Guest editors: R. Céréghino, J. Biggs, B. Oertli & S. Declerck The ecology of European ponds: defining the characteristics of a neglected freshwater habitat     

Landscape patterns of understory composition and richness across a moisture and nitrogen mineralization gradient in Ohio (U.S.A.) Quercus forests

This study quantified relationships of understory vascular plant species composition and richness along environmental gradients over a broad spatial scale in second-growth oak forests in eastern North America. Species frequencies were recorded in 108 25 × 25 m plots in four study sites extending over 70 km in southern Ohio, U.S.A.. The plots were stratified into three long-term soil moisture classes with a GIS-derived integrated moisture index (IMI). In addition to the IMI, the environmental data matrix included eight soil and three overstory variables. Canonical correspondence analysis (CCA) indicated that variations in understory species composition were most strongly related to topographic variations in predicted moisture (IMI), N mineralization rate, nitrification rate, and soil pH. In addition, floristic variation at the regional scale was correlated with variations in soil texture, nitrification, pH, and PO₄ ^–, resulting from differences in the soil parent material complexes among sites. Species richness averaged 65 species/plot, and increased with moisture and fertility. Stepwise regression indicated that richness was positively correlated with N mineralization rate and nitrification rate, and inversely correlated with tree basal area. Greater richness on fertile plots was the largely the result of increasing forb richness. Forb richness per quadrat (2 m²) was most strongly and positively related to N mineralization rate. Conversely, richness of understory individuals of tree species was greatest on xeric, less-fertile plots. Our results describe general, broad-scale species-environment relationships that occurred at both the topographic scale (long-term moisture status and fertility) and the regional scale (geomorphological differences among the sites). Strong species richness-N mineralization correlations indicate an important link between below-ground processes and above-ground biodiversity. Because N availability was a strong correlate to vegetation patterns at a broad-scale, our results suggest that the increasing rates of atmospheric N deposition in the region could have a major impact on understory vegetation dynamics.     

Environmental correlates of species richness for native freshwater fish in Oregon, U.S.A.

Aim To better understand how environmental factors affect fish species richness across the state of Oregon. Location Oregon, U.S.A. Methods A database showing collection locations of 4911 fish specimens in the Oregon State University museum was modified by the Oregon Natural Heritage Program to include probable occurrences, and mapped within a grid of 375 hexagons that cover the state. The individual species maps of freshwater fish in Oregon were reviewed and revised by thirty regional fish biologists and then synthesized into a single map of native species richness. We used regression tree analysis (RTA) and multiple linear regression (MLR) to assess patterns of fish species richness with twenty environmental, three anthropogenic, and two historical variables. Results RTA explained 66% of the variation in native species richness, associating richness with annual air temperature range, minimum January temperature, introduced species richness, and stream density. MLR explained 68% of native species richness variation and associated richness with maximum July temperature, air temperature range, standard deviation of monthly temperature, stream density, introduced species richness, and basin connectivity. Main conclusions We conclude that for these data and at this scale, native fish species richness in Oregon is associated with annual climatic extremes, spatial variability of climate, stream density, basin connectivity, and introduced fishes.     

基于等面积高度带划分的贺兰山维管植物物种丰富度的海拔分布格局

山地植物物种丰富度海拔分布格局是生物多样性研究的热点之一。以往研究中一般将山体划分为等海拔间距的高度带, 以分析物种丰富度的垂直格局, 其缺陷在于因各高度带面积不相等而可比性下降。为消除面积不相等的影响, 作者利用数字高程数据(DEM, Digital Elevation Model)在地理信息系统(GIS)工具支持下, 尝试将贺兰山(海拔范围1,300–3,500 m)划分为等面积的数个高度带, 从而分析其物种丰富度的海拔格局。结果表明: (1) 贺兰山物种丰富度呈现为单峰式海拔格局, 峰值出现在海拔2,000 m附近。(2) 逐步回归分析显示, 坡度异质性是解释物种丰富度海拔分布格局的最优因子。高度带的坡度异质性越大, 意味着地形的起伏变化越大, 反映出生境类型越趋多样化, 从而可维持多个物种的共存。(3) 贺兰山植物物种丰富度在海拔2,000 m 附近达到峰值, 可能与植被演变历史、气候条件、地形复杂度、生态过渡带和中间膨胀效应的共同影响有关。(4) 对山体进行等面积划带, 可直接消除面积不相等带来的影响, 与等间距划带的方法相比, 尤其在物种海拔分布信息准确度较高时更具优势。     

Effects of river level fluctuation on plant species richness, diversity, and distribution in a floodplain forest in Central Amazonia

River levels in Central Amazonia fluctuate up to 14 m annually, with the flooding period ranging from 50 to 270 days between the rising and falling phases. Vast areas of forest along the rivers contain plant species that are well adapted to annual flooding. We studied the effect of flooding level on tree species richness, diversity, density, and composition in lake, river, and stream habitats in Jaú National Park, Brazil. 3051 trees >10 cm diameter (at 1.3 m diameter at breast height, dbh) were measured and identified in 25 10 m × 40 m randomly selected plots in each habitat. Ordination methods and analysis of variance results showed that forested areas near lakes had significantly lower species richness of trees than riverine and streamside habitats. Plot species richness and diversity were strongly negatively correlated with the water level and duration of flooding. The drier (stream) habitat had more total species (54 species of trees) and more unique species of trees (6 tree species) than the riverine (52 tree species; 3 unique species) and lake (33 tree species; 3 unique species) habitats. Species composition overlap among habitats was surprisingly high (42.6–60.6% overlap), almost one-third of the species were found in all three habitat types, and few species were unique to each habitat. We conclude that: (1) duration of flooding has a strong impact on species richness, diversity and plant distribution patterns; (2) most species are adapted to a wide range of habitats and flood durations; and (3) while flood duration may decrease local diversity, it also creates and maintains high landscape-scale diversity by increasing landscape heterogeneity. Received: 20 April 1997 / Accepted: 14 January 1999     

Combining projected changes in species richness and composition reveals climate change impacts on coastal Mediterranean fish assemblages

Species Temporal Turnover (STT) is one of the most familiar metrics to assess changes in assemblage composition as a consequence of climate change. However, STT mixes two components in one metric, changes in assemblage composition caused by a process of species loss or gain (i.e. the nestedness component) and changes in assemblage composition caused by a process of species replacement (i.e. the species replacement component). Drawing on previous studies investigating spatial patterns of beta diversity, we propose measures of STT that allow analysing each component (species replacement vs. nestedness), separately. We also present a mapping strategy to simultaneously visualize changes in species richness and assemblage composition. To illustrate our approach, we used the Mediterranean coastal fish fauna as a case study. Using Bioclimatic Envelope Models (BEMs) we first projected the potential future climatic niches of 288 coastal Mediterranean fish species based on a global warming scenario. We then aggregated geographically the species‐level projections to analyse the projected changes in species richness and composition. Our results show that projected changes in assemblage composition are caused by different processes (species replacement vs. nestedness) in several areas of the Mediterranean Sea. In addition, our mapping strategy highlights that the coastal fish fauna in several regions of the Mediterranean Sea could experience a ‘cul‐de‐sac’ effect if exposed to climate warming. Overall, the joint exploration of changes in species richness and composition coupled with the distinction between species replacement and nestedness bears important information for understanding the nature of climate change impacts on biodiversity. These methodological advances should help decision‐makers in prioritizing action in the areas facing the greatest vulnerability to climate.     

Effects of population density on forest structure and species richness and diversity of trees in Kampong Thom Province, Cambodia

This study examined differences in stand structure, tree species richness, and tree species diversity in relation to population density in Kampong Thom Province, Cambodia. Tree data were obtained from a 1997 forest inventory involving 60 clusters (540 plots) systematically distributed over 30% of the provincial forest area. Spatially referenced population data were obtained from the 1998 national population census. The average number of trees per cluster was 356/ha, the average basal area, 23 m²/ha, the average stand volume, 217 m³/ha, and the average aboveground biomass, 273 Mg/ha for all trees of DBH 10 cm and larger. The average species richness per cluster was 37 species, while average species diversity was measured as 0.916 using Simpson’s index and 2.98 by Shannon’s index. Significant negative correlations were generally found between population density surrounding clusters and tree density, basal area, stand volume, aboveground biomass, and species richness and diversity for three examined diameter classes (DBH of 10–30, ≥30, and ≥10 cm). As the distance from clusters for calculating population density increased, the correlation levels increased up to 5 or 7 km, depending on the variables and diameter class, and then stayed relatively constant for stand structure variables and decreased for species richness and diversity. The results indicate that evidence of disturbance was more pronounced at higher population density up to around 5 to 7 km. We suggest that introduction of greater controls on human disturbance should be a high priority for resource management and conservation in Kampong Thom Province and, presumably, Cambodia as a whole.