A New Protein Factor, Connectein, as a Constituent of the Large Form of Ferredoxin-NADP Reductase

The large form of ferredoxin-NADP reductase (FNR) was treatedwith 66% iso-propyl alcohol and fractionated. The precipitatecontained the small form of FNR, which was incapable of reassociatingto the large form. The supernatant contained a new protein factorof low molecular weight. When the protein factor was isolatedfrom the supernatant and added to the small form of FNR, thelarge form of FNR was reconstituted under high salt conditions.Experimental findings indicate that the large form of FNR wascomposed of two molecules of the small form of FNR which wereconnected by a protein factor. The protein factor was purifiedby hydrophobic interaction column chromatography using butyl-Toyopearl650M and its molecular weight was determined to be about 10,000by gel filtration. It was a colorless protein with an unusualabsorption spectrum in ultra-violet regions. The protein factorwas very stable against heat but was digested by trypsin. Itwas named "Connectein" after its connective action. ¹ Present address: Biotechnology Research Laboratory, Toyo SodaManufacturing Co., Ltd., Hayakawa, Ayase-shi, Kanagawa 252,Japan. ² Present address: Nagase Biochemicals, Ltd., Osadano-cho, Fukuchiyama620, Japan. (Received November 9, 1984; Accepted February 9, 1985)     

Form of Inorganic Carbon Utilized for Photosynthesis in Chlamydomonas reinhardtii1

The effect of carbonic anhydrase (CA) on time courses of photosynthetic¹⁴C incorporation in the presence of ¹⁴CO₂ or NaH¹⁴CO₃ was studiedwith cells of Chlamydomonas reinhardtii which had been grownunder ordinary air (low-CO₂ cells) or air enriched with 4% CO₂(high-CO₂ cells). Experimental data obtained at 20°C andpH 8.0 suggested that the major form of inorganic carbon utilizedby high-CO₂ cells was CO₂, while that utilized by low-CO₂ cellswas HCO₃^–. The cell suspension showed CA activity which was comparableto that observed in the sonicate of cells. Both activities werehigher in low-CO₂ cells than in high-CO₂ cells. The mechanism by which HCO₃^– is utilized by low-CO₂ cellsof C. reinhardtii is discussed. ³Present address: Department of Biology, Faculty of Science,University of Niigata, Niigata 950-21, Japan. (Received August 4, 1982; Accepted January 19, 1983)     

Mature ferredoxin-NADP reductase with a glutaminyl residue at N-terminus from spinach chloroplasts

When 35%-acetone extract of spinach chloroplasts was separated by SDS-PAGE, ferredoxin-NADP reductase (FNR) appeared as a single band at a molecular mass of 35 kDa. After the polypeptides on the SDS-PAGE plate were electroblotted onto PVDF membrane, the FNR band was cut out and analyzed for N-terminal structure in a gas-phase protein sequencer. Two different FNR peptides were identified: one with glutamine at its N-terminus (Gln-FNR) and the other with -pyroglutamic acid (tFNR) fraction was extracted from chloroplasts with their loosely bound FNR (lFNR) fraction removed in advance. The tFNR fraction contained Gln-FNR only. The Gln-FNR could be highly purified by affinity chromatography using a ferredoxin column. The purified Gln-FNR was digested with arginyl endopeptidase for peptide mapping and partial sequence analysis. Primary structure of Gln-FNR differed from that of lFNR loosely bound FNR - tFNR tightly bound FNR - -pyroglutamic acid at N-terminus     

Properties of the Respiratory NAD(P)H Dehydrogenase Isolated from the Cyanobacterium Synechocystis PCC6803

Activity staining with NADPH-nitroblue tetrazolium after native-PAGEof membrane proteins of Synechocystis PCC6803, solubilized with3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate (CHAPS),revealed four NAD(P)H dehydrogenase (NDH) activities; an NDHcomplex of the respiratory chain, a ferredoxin NADP⁺ reductase(FNR), a drgA product which oxidized both NADH and NADPH, andan uncharacterized NADH-specific enzyme. The NDH complex waspurified with anion exchange and gel filtration chromatographies.The purified complex had a molecular mass of 376 kDa and wascomposed of 9 subunits. Western analysis showed that the complexcontained the NDH-H subunit, but not NDH-A or B. The enzymereduced ferricyanide much faster than plastoquinone and usedNADPH as its prefered electron donor rather than NADH. The enzymaticactivity was inhibited by diphenyleneiodonium chloride and salicylhydroxamicacid, but not by rotenone, p-chloromercuribenzoate, N-ethylmaleimide,flavon, dicumarol, or antimycin A. These results suggest thatthe purified complex is a hydrophilic subcomplex which containsan NADPH binding site and flavin, and is dissociated from ahydrophobic subcomplex, which contains quinone binding site. ¹Present address: Division of Applied Life Sciences, GraduateSchool of Agriculture, Kyoto University, Sakyo, Kyoto, 606-8502Japan ³Present address: Department of Biotechnology, Faculty of Engineering,Fukuyama University, 1 Gakuencho, Fukuyama, Hiroshima, 729-0292Japan     

Ferredoxin and Ferredoxin-NADP Reductase from Photosynthetic and Nonphotosynthetic Tissues of Tomato

Ferredoxin and ferredoxin-NADP⁺ oxidoreductase (FNR) were purified from leaves, roots, and red and green pericarp of tomato (Lycopersicon esculentum, cv VFNT and cv Momotaro). Four different ferredoxins were identified on the basis of N-terminal amino acid sequence and charge. Ferredoxins I and II were the most prevalent forms in leaves and green pericarp, and ferredoxin III was the most prevalent in roots. Red pericarp of the VFNT cv yielded variable amounts of ferredoxins II and III plus a unique form, ferredoxin IV. Red pericarp of the Momotaro cv contained ferredoxins I, II, and IV. This represents the first demonstration of ferredoxin in a chromoplast-containing tissue. There were no major differences among the tomato ferredoxins in absorption spectrum or cytochrome c reduction activity. Two forms of FNR were present in tomato as judged by anion exchange chromatography and by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. FNR II had a lower apparent relative molecular weight, a slightly altered absorption spectrum, and a lower specific activity for cytochrome c reduction than FNR I. FNR II could be a partially degraded form of FNR I. The FNRs from the different tissues of tomato plants all showed diaphorase activity, with FNR II being more active than FNR I. The presence of ferredoxin and FNR in heterotrophic tissues of tomato is consistent with the existence of a nonphotosynthetic ferredoxin/FNR redox pathway to support the function of ferredoxin-dependent enzymes.     

Purification and Storage of Ribulose 1,5-bisphosphate Carboxylase from Rice Leaves

Ribulose 1,5-bisphosphate (RuBP) carboxylase was purified fromrice leaves. By using a buffer containing 12.5% (v/v) glycerolthroughout purification, the enzyme was protected from coldlability and was obtained at a high yield (5.5 mg/g fresh wt).The purified enzyme exhibited different rates of CO₂/Mg²⁺-activationby temperature pretreatment/storage. The purified enzyme was stable for at least one year in phosphatebuffer containing 12.5% (v/v) glycerol at 4°C or 50% (v/v)glycerol at –20°C. (Received March 1, 1983; Accepted June 27, 1983)     

Reversible interconversion of the functional state of the gene regulator FNR from Escherichia coli in vivo by O2 and iron availability

FNR, the gene regulator of anaerobic respiratory genes of Escherichia coli is converted in vivo by O₂ and by chelating agents to an inactive state. The interconversion process was studied in vivo in a strain with temperature controlled synthesis of FNR by measuring the expression of the frd (fumarate reductase) operon and the reactivity of FNR with the alkylating agent iodoacetic acid. FNR from aerobic bacteria is, after arresting FNR synthesis and shifting to anaerobic conditions, able to activate frd expression and behaves in the alkylation assay like anaerobic FNR. After shift from anaerobic to aerobic conditions, FNR no longer activates the expression of frd and reacts similar to aerobic FNR in the alkylation assay. The conversion of aerobic (inactive) to anaerobic (active) FNR occurs in the presence of chloramphenicol, an inhibitor of protein synthesis. Anaerobic FNR can also be converted post-translationally to inactive, metal-depleted FNR by growing the bacteria in the presence of chelating agents. The reverse is also possible by incubating metal-depleted bacteria with Fe²⁺. From the experiments it is concluded that the aerobic and the metal-depleted form of FNR can be transferred post-translationally and reversibly to the anaerobic (active) form. The response of FNR to changes in O₂ supply therefore occurs at the FNR protein level in a reversible mode.Abbreviation BV_red = reduced benzyl viologen     

A Ferredoxin-Like Electron Carrier from Non-Green Cultured Tobacco Cells

The electron carrier effective in nitrite reduction in proplastidsof cultured tobacco cells has been purified by DEAE-celluloseand Sephadex G-100 chromatography. Its electron carrying activityin the nitrite reduction system with dithionite showed that355 nmol NO₂^– reduced mg^–1 protein min^–1.The electron carrier had absorption maxima at 419, 459 and 469nm, and the absorbance peak at 419 nm was decreased 56% on reduction.The reduced form of the electron carrier showed an electronparamagnetic resonance signal with g=1.93. Thus, this electroncarrier is a kind of ferredoxin. It did not, however, show electroncarrying activity in the NADP-photoreduction system of chloroplasts.Its molecular weight was calculated as 19,500 by Sephadex G-100chromatography. ¹Present address: Second Department of Anatomy, Fukushima MedicalCollege, Sugitsuma-cho, Fukushima 960, Japan. (Received April 11, 1983; Accepted February 6, 1984)     

Purification and Properties of UDP-glucuronate Pyrophosphorylase from Pollen of Typha latifolia Linne

UDP-glucuronate pyrophosphorylase from the pollen of Typha latifoliaLinne was purified about 600-fold by protamine sulfate treatment,ammonium sulfate fractionation, gel filtration, chromatofocusing,affinity chromatography, and isoelectric focusing. The purificationwas carried out using buffer containing 20% sucrose which helpedto prevent enzyme inactivation. This enzyme required equimolarlevels of Mg²⁺ to PP_i or UTP for maximum velocity of enzymecatalysis. Results of experiments on product inhibition andthe initial velocity of the enzyme catalysis reaction suggesteda Theorell-Chance mechanism. ¹ Present address: Japan Spectroscopic Co., 2967-5, Ishikawa-Cho,Hachioji-City, Tokyo 192, Japan. (Received April 5, 1983; Accepted September 26, 1983)     

Subcellular localization of ferredoxin-NADP+ oxidoreductase in phycobilisome retaining oxygenic photosysnthetic organisms

Ferredoxin-NADP⁺ oxidoreductase (FNR) catalyzing the terminal step of the linear photosynthetic electron transport was purified from the cyanobacterium Spirulina platensis and the red alga Cyanidium caldarium. FNR of Spirulina consisted of three domains (CpcD-like domain, FAD-binding domain, and NADP⁺-binding domain) with a molecular mass of 46 kDa and was localized in either phycobilisomes or thylakoid membranes. The membrane-bound FNR with 46 kDa was solublized by NaCl and the solublized FNR had an apparent molecular mass of 90 kDa. FNR of Cyanidium consisted of two domains (FAD-binding domain and NADP⁺-binding domain) with a molecular mass of 33 kDa. In Cyanidium, FNR was found on thylakoid membranes, but there was no FNR on phycobilisomes. The membrane-bound FNR of Cyanidium was not solublized by NaCl, suggesting the enzyme is tightly bound in the membrane. Although both cyanobacteria and red algae are photoautotrophic organisms bearing phycobilisomes as light harvesting complexes, FNR localization and membrane-binding characteristics were different. These results suggest that FNR binding to phycobilisomes is not characteristic for all phycobilisome retaining oxygenic photosynthetic organisms, and that the rhodoplast of red algae had possibly originated from a cyanobacterium ancestor, whose FNR lacked the CpcD-like domain.     

Isolation of the Red-light-absorbing Form of Phytochrome from Light-grown Pea Shoots

Phytochrome was extracted from both light-grown and dark-grownshoots of Pisum and partially purified by brushite chromatographyand ammonium sulfate fractionation. About 160–270 ng ofphytochrome per g green tissue extracted was recovered afterthe partial purification while about 5.1–8.6 µgof phytochrome per g etiolated tissue was recovered. Only thered-light-absorbing form of phytochrome was detected in extractsprepared from both light- and dark-grown tissue, even thoughthe light-grown tissue was harvested in daylight and purificationwas done entirely at 0–4°C with only a dim green safelight. No significant differences were found between phytochromepurified from green and etiolated tissues, either in their spectralproperties or in their immunochemical reactivity against antietiolated-zucchini-phytochromeserum. ¹ Permanent address: Botany Department, University of Georgia,Athens, Georgia 30602, U.S.A (Received June 10, 1981; Accepted August 6, 1981)     

Overexpression of petH Gene of Cyanobacterium synechococcus sp. PCC 7002 in Escherichia coll and Purification of the Expressed Product

Fd:NADP+ oxidoreductase (FNR) is one of the key enzymes in photosynthetic electron transport. The gene petH encoding FNR of Synechococcus sp. PCC 7002 was cloned into the expressing vector pET-3 d' and overexpressed in E. coli. The amount of recombinant FNR (rFNR) was over 50% of the total cellular proteins. There were two forms of FNR activity, one is soluble and the other one was in the form of inclusion bodies. The soluble rFNR was purified through ion exchange chromatography and gel chromatography. The rFNR in the form of inclusion bodies was first solubilized with 6.7 mol/L urea, and then refolded into the active form in the presence of flavin adenine dinucleotide (FAD). Further purification was performed by ion exchange chromatography. The rFNR pmified from either form of the expressed product had the maximum absorption spectrum as that of the natural FNR from cyanobacteria, whose maximum absorption was at 273, 385 and 456 ran respectively. N-tenninal sequencing showed that rFNR was indeed a product of petH gene expression, rFNR could catalyze the electron transport from P700 to NADP+ in the presence of ferredoxin. The optimal pH for diaphorase activity of rFNR was 8.0 and the optimal temperature was 30 ℃.     

Purification and Characterization of Assimilatory Nitrate Reductase from the Cyanobacterium Plectonema boryanum

Assimilatory nitrate reductase (NR) was solubilized by acetonetreatment from Plectonema boryanum and was purified 7,700-foldby heat treatment, ammonium sulfate fractionation and chromatographyon DEAE-Sephacel and Sephadex G-150. Purified NR had a specificactivity of 85 µmol NO₂^– formed min^–1 mg^–1protein. The enzyme retained both ferredoxin (Fd)- and methylviologen (MV)-linked NR activities throughout the purificationprocedure. Molecular weight was 80,000. The pH optimum was 10.5in the MV-assay and 8.5 when assayed with enzymatically reducedFd as the electron donor. Apparent Km values for nitrate andMV were 700 µM and 2,500µM in the MVassay and 55µM and 75 µM for nitrate and Fd in the Fd-assay.The enzyme was inhibited by thiol reagents and metal-chelatingreagents. (Received October 1, 1982; Accepted March 8, 1983)     

Studies on the Cell Wall of Chlorella IV. Incorporation of Glucose-Carbon into Cell Walls of Synchronously Growing Cells of Chlorella ellipsoidea

Uniformly ¹⁴C-labeIled glucose was fed to synchronously growingChlorella cells in the dark or in light. The rate of ¹⁴C-incorporationinto hemicellulose showed two maxima one in the growth phaseand one in the reproductive phase. Significant ¹⁴Cincorporationinto a "rigid wall" was found only in the reproductive phase. (Received April 14, 1983; Accepted June 15, 1983)     

Donation of Electrons to Plastoquinone by NAD(P)H Dehydrogenase and by Ferredoxin-Quinone Reductase in Spinach Chloroplasts

The reduction of plastoquinone by NADPH was detected as an increasein the dark level of Chi fluorescence in osmotically rupturedchloroplasts of spinach. This activity was observed only whenthe chloroplasts were ruptured in a medium containing a highconcentration of MgCl₂. The activity was suppressed by inhibitorsof the respiratory NADH dehydrogenase (NDH) complex in mitochondria,capsaicin and amobarbital, suggesting that the activity wasmediated by chloroplastic NDH complex. Antimycin A, an inhibitorof ferredoxin-quinone reductase (FQR), and the protonophorenigericin also inhibited the increase in Chi fluorescence byNADPH. By contrast, JV-ethylmaleimide (NEM), an inhibitor offerredoxin-NADP⁺ reductase (FNR), did not suppress the fluorescenceincrease, showing that FNR is not involved in this reaction.When the osmotically ruptured chloroplasts were washed by centrifugation,a further addition of ferredoxin as well as NADPH was requiredfor an increase in fluorescence. This ferredoxin-de-pendentactivity also was suppressed by antimycin A, but only partlyinhibited by capsaicin or amobarbital, suggesting that thisis mediated mainly by FQR. These findings suggest that the NADPH-bindingsubunit of NDH complex is easily dissociated from the thylakoidmembranes during the process of the washing the thylakoids bycentrifugation. ³Present address: Shanghai Institute of Plant Physiology, AcademiaSinica, 300 Fenglin Road, Shanghai 200032, China ⁵Present address: Department of Biotechnology, Faculty of Engineering,Fukuyama University, 1 Gakuen-cho, Fukuyama, Hiroshima, 729-02Japan     

The root form of ferredoxin-NADP oxidoreductase is expressed in rice coleoptiles for the assimilation of nitrate

Two ferredoxin-dependent proteins, nitrite reductase and glutamate synthase, play a role in nitrate assimilation during the anaerobic germination of rice (Oryza sativa L.). This paper reports the expression of the root form of ferredoxin-NADP⁺ oxidoreductase (FNR), the protein responsible for providing reduced ferredoxin in rice coleoptiles. Using an antibody against FNR, a protein with the expected molecular mass for root FNR (35 kDa) was recognized by Western blot analysis in extracts from aerobic and anaerobic coleoptiles. The enzyme is synthesized de novo, as shown by immunoprecipitation of the radiolabeled 35-kDa protein from anaerobic seedlings grown in the presence of [³⁵S]methionine. Northern blot analysis with specific probes for root and leaf FNR showed the presence of mRNA for the root form but not for the leaf form, in both aerobic and anaerobic rice coleoptiles. The inductive effect of exogenous nitrate on the expression of FNR is further evidence for the presence of the root type of FNR in rice coleoptiles. The importance of the expression of root FNR during the anaerobic development of rice seedlings is discussed. Received: 7 October 1996 / Accepted: 22 January 1997     

Purification of membrane-bound ferredoxin: NADP+ oxidoreductase and of plastocyanin from a detergent extract of washed thylakoids

A method is described for the isolation and purification of ferredoxin-NADP⁺ oxidoreductase (FNR, E.C. 1.18.1.2) and plastocyanin from spinach thylakoids. FNR is recovered from pools which are loosely and tightly bound to the membrane, with minimal disruption of pigment-protein complexes; yields can thus be higher than from procedures which extract only the loosely bound enzyme.Washed thylakoid membranes were incubated with the dipolar ionic detergent CHAPS (3-(3-cholamidopropyl-dimethylammonio)-1-propane-sulfonate). This provided an extract containing FNR and PC as its principal protein components, which could be rapidly separated from one another by chromatography on an anion-exchange column. FNR was purified to homogeneity (as judged from sodium dodecyl sulfate gel electrophoresis and the ratio between protein and flavin absorption maxima), using chromatography on phosphocellulose followed by batchwise adsorption to, and elution from hydroxylapatite. Plastocyanin was further purified on a Sephadex G-75 molecular sieve column.A typical yield, obtained in 3–4 days from 1 kg of deveined spinach leaves, was 7 mg of pure FNR (a single protein of M_r=37,000) and 3.5 mg of plastocyanin.Abbreviations CHAPS- 3-(3-cholamidopropyl-dimethylammonio)-1-propanesulfonate) - Chl- chlorophyll - FNR- ferredoxin-NADP⁺ oxidoreductase - Mops- 3-(N-morpholino) propanesulfonic acid - PC- plastocyanin - PMSF- phenylmethanesulfonylfluoride - SDS- sodium dodecyl sulfate - SDS-PAGE- sodium dodecyl sulfate polyacrylamide gel electrophoresis - Tricine- N-tris (hydroxymethyl) methylglycine     

Detailed characterization of Synechocystis PCC 6803 ferredoxin:NADP+ oxidoreductase interaction with model membranes

Direct interaction of ferredoxin:NADP⁺ oxidoreductase (FNR) with thylakoid membranes was postulated as a part of the cyclic electron flow mechanism. In vitro binding of FNR to digalactosyldiacylglycerol and monogalactosyldiacylglycerol membranes was also shown. In this paper we deal with the latter interaction in more detail describing the effect for two FNR forms of Synechocystis PCC 6803. The so-called short FNR (sFNR) is homologous to FNR from higher plant chloroplasts. The long FNR (lFNR) form contains an additional domain, responsible for the interaction with phycobilisomes. We compare the binding of both sFNR and lFNR forms to native and non-native lipids. We also include factors which could modulate this process: pH change, temperature change, presence of ferredoxin, NADP⁺ and NADPH and heavy metals. For the lFNR, we also include phycobilisomes as a modulating factor. The membrane binding is generally faster at lower pH. The sFNR was binding faster than lFNR. Ferredoxin isoforms with higher midpoint potential, as well as NADPH and NADP⁺, weakened the binding. Charged lipids and high phosphate promoted the binding. Heavy metal ions decreased the rate of membrane binding only when FNR was preincubated with them before injection beneath the monolayer. FNR binding was limited to surface lipid groups and did not influence hydrophobic chain packing. Taken together, FNR interaction with lipids appears to be non-specific, with an electrostatic component. This suggests that the direct FNR interaction with lipids is most likely not a factor in directing electron transfer, but should be taken into account during in vitro studies.     

Characterization of NADH-dependent Fe3+-chelate reductases of maize roots

Iron-deficient maize seedlings exhibit a starvation syndromecharacterized by an increase in different parameters such asroot fresh weight (+ 30%), protein (+ 25%) and plasma membrane-associatedNADH Fe³⁺ –EDTA reductase (NFR; +45%). NFR activity wasfound associated with 9 000g (20 min) and 110 000 g (1 h) sediments,purified plasma membrane and 110000 g supernatants. No differenceswere observed between the properties of reductases from Fe-starvedversus Fe-sufficient roots. The characterization of NFR wasundertaken. Low Mr forms (46 and 28 kDa, as detected by size-exclusionchromatography) were present in all fractions whereas 210 and110 kDa forms were unique in membranes and 110 000 g supernatants,respectively. The 210 kDa form was solubilized from microsomes and characterized.The enzyme is cetone-resistant and appears to be comprised largelyif not totally of the low Mr forms (46 and 28 kDa, correspondingto 30 and 32 kDa bands, respectively, in SDS-PAGE). The 210kDa form tended to break down to subunits following dilution,and the effect could be prevented by addition of 10% (v/v) glycerol.A three-step purification procedure for microsomal NFR was devised,consisting of acetone fractionation of lysophosphatidycholinesolubilized microsomes, Blue Sepharose CL-6B affinity chromatographyand a final size exclusion chromatography in the absence ofdetergent, resulting in a 700-fold purification of the 28 kDaprotein. The best electron acceptor for the purified 28 kDaform was ferricyanide (400µmol min^–1mg^–1 protein)followed by Fe³⁺–chelates (up to 200µol min^–1mg^–1 protein) and other compounds to a lesser extent (cytc, DCPIP).The 46 kDa form, on the other hand, had high ferricyanidereductase activity (about 300µmol min^–1mg^–1protein) and relatively low Fe³⁺–chelate reductase activity.The properties of NFR (high M, active forms, donor and acceptorspecificity, purification behaviour, large hydrophilic domains,size of subunits) suggest a relationship with the NADH-cyt b5reductase family of FAD-containing proteins. None of the latterflavoproteins is a transmembrane enzyme. Key words: Maize roots, Fe³⁺–reductase, ferricyanide reductase, iron