Common ancestry or environmental trait filters: cross‐continental comparisons of trait–habitat relationships in tropical anuran amphibian assemblages

Aim To investigate whether trait–habitat relations in biological communities converge across three global regions. The goal is to assess the role of habitat templets in shaping trait assemblages when different assembly mechanisms are operating and to test whether trait–habitat relations reflect a common evolutionary history or environmental trait filters. Location Guiana Shield, South America; Upper Guinea Forest Block, West Africa; Borneo rain forests, Southeast Asia. Methods We compared large anuran amphibian data sets at both the regional and cross‐continental scale. We applied a combination of three‐table ordinations (RLQ) and permutation model‐based multivariate fourth‐corner statistics to test for trait–habitat relationships at both scales and used phylogenetic comparative methods to quantify phylogenetic signal in traits that enter these analyses. Results Despite the existence of significant trait–habitat links and congruent trait patterns, we did not find evidence for the existence of a universal trait–habitat relationship at the assemblage level and no clear sign for cross‐continental convergence of trait–habitat relations. Patterns rather varied between continents. Despite the fact that a number of traits were conserved across phylogenies, the phylogenetic signal varied between regions. Trait–habitat relations therefore not only reflect a common evolutionary history, but also more recently operating environmental trait filters that ultimately determine the trait composition in regional assemblages. Main conclusions Integrating trait–habitat links into analyses of biological assemblages can enhance the predictive power and general application of species assembly rules in community and macroecology, particularly when phylogenetic comparative methods are simultaneously applied. However, in order to predict trait composition based on habitat templets, trait–habitat links cannot be assumed to be universal but rather have to be individually established in different regions prior to model building. Only then can direct trait‐based approaches be useful tools for predicting fundamental community patterns.     

Functional diversity and trait–environment relationships of stream fish assemblages in a large tropical catchment

1. The species composition of stream fish assemblages changes across the longitudinal fluvial gradient of large river basins. These changes may reflect both zonation in species distributions and environmental filtering of fish traits as stream environments change from the uplands to the lowlands of large catchments. Previous research has shown that taxonomic diversity generally increases in larger, lowland streams, and the River Continuum Concept, the River Habitat Template and other frameworks have provided expectations for what functional groups of fishes should predominate in certain stream types. However, studies addressing the functional trait composition of fish assemblages across large regions are lacking, particularly in tropical river basins. 2. We examined functional trait–environment relationships and functional diversity of stream fish assemblages in the Río Grijalva Basin in southern Mexico. Traits linked to feeding, locomotion and life history strategy were measured in fishes from streams throughout the catchment, from highland headwaters to broad, lowland streams. Relationships between functional traits and environmental variables at local and landscape scales were examined using multivariate ordination, and the convex hull volume of trait space occupied by fish assemblages was calculated as a measure of functional diversity. 3. Although there were a few exceptions, functional diversity of assemblages increased with species richness along the gradient from uplands to lowlands within the Grijalva Basin. Traits related to swimming, habitat preference and food resource use were associated with both local (e.g. substratum type, pool availability) and landscape‐scale (e.g. forest cover) environmental variables. 4. Along with taxonomic structure and diversity, the functional composition of fish assemblages changed across the longitudinal fluvial gradient of the basin. Trait–environment relationships documented in this study partially confirmed theoretical expectations and revealed patterns that may help in developing a better understanding of general functional responses of fish assemblages to environmental change.     

Landscape variables influence taxonomic and trait composition of insect assemblages in Neotropical savanna streams

相似文献   

Intercontinental trends in functional and phylogenetic structure of stream fish assemblages

Understanding of community assembly has been improved by phylogenetic and trait‐based approaches, yet there is little consensus regarding the relative importance of alternative mechanisms and few studies have been done at large geographic and phylogenetic scales. Here, we use phylogenetic and trait dispersion approaches to determine the relative contribution of limiting similarity and environmental filtering to community assembly of stream fishes at an intercontinental scale. We sampled stream fishes from five zoogeographic regions. Analysis of traits associated with habitat use, feeding, or both resulted in more occurrences of trait underdispersion than overdispersion regardless of spatial scale or species pool. Our results suggest that environmental filtering and, to a lesser extent, species interactions were important mechanisms of community assembly for fishes inhabiting small, low‐gradient streams in all five regions. However, a large proportion of the trait dispersion values were no different from random. This suggests that stochastic factors or opposing assembly mechanisms also influenced stream fish assemblages and their trait dispersion patterns. Local assemblages tended to have lower functional diversity in microhabitats with high water velocity, shallow water depth, and homogeneous substrates lacking structural complexity, lending support for the stress‐dominance hypothesis. A high prevalence of functional underdispersion coupled with phylogenetic underdispersion could reflect phylogenetic niche conservatism and/or stabilizing selection. These findings imply that environmental filtering of stream fish assemblages is not only deterministic, but also influences assemblage structure in a fairly consistent manner worldwide.     

Spatial-temporal distribution of preimaginal blackflies in Neotropical streams

The current study investigates the spatial-temporal distribution of preimaginal blackflies in three a priori established, adjacent areas of Brazil and Venezuela. First we tested the hypothesis that the distribution of individual simuliid species, over two geographic scales, were predictable on the basis of several habitat parameters. Secondly, we determined if local species assemblages remain constant over two spatial axes, i.e., were species assemblages predictable within and between defined regions. Finally we compared the species assemblage between Venezuelan streams sampled in both the wet (October) and dry (February) seasons. As stream conditions changed across a north–south gradient, so did the occurrence of the most common species. This change in species composition from upland to lowland areas is consistent with the patterns of faunal change seen in North American simuliid assemblages. Discriminant Function Analysis showed a strong association between regional demarcations and stream site conditions. These results were paralleled by the strong correspondence between species assemblages and these regions. Thus each region presented both distinct stream environments and species assemblages. Monte Carlo analysis suggests that some if not all species are not only present in both the wet and dry season but that they are continuing to use the same stream sites. Three broad contingent rules for blackfly species assemblages in new world streams are put forward; (i) the ubiquitous nature of simuliids; (ii) species often distribute themselves along an axis of stream size and; (iii) there is a strong and consistent correspondence between regional characteristics of streams and the species assemblage.     

A continental‐scale analysis of fish assemblage functional structure in European rivers

The theory of traits (life‐history, ecological and biological traits) states that a species’ characteristics might enable its persistence and development in given environmental conditions. If environment is the major factor controlling functional assemblage structure, species with similar attributes are expected to inhabit a similar environment. This study uses trait states in 849 European riverine fish assemblages to analyze the influence of environment, phylogeny and biogeography on the functional structure of these assemblages. European fish assemblages were highly structured and two main syndromes (a suite of coevolved traits) were observed: 1) assemblages dominated by stenothermal intolerant individuals and 2) assemblages dominated by eurythermal, eurytopic and tolerant individuals. Temperature and stream physical structure were the two main environmental factors explaining the diversity of fish assemblage functional structures, while the influence of biogeographic factors was weak, once environment was taken into account. This suggests that, whatever the regional species pool, similar assemblage functional structures will be found in similar environmental conditions. The phylogenetic relatedness between species might also explain to some extent the associations between the species traits observed among European fish assemblages.     

A macroecological perspective of trait patterns in stream communities

相似文献   

Space–time interactions and invertebrate assemblage change in stream networks

Streams form hierarchical, dendritic physical networks, but relatively little is known about how this spatial structure affects community assembly. We investigated interactions between changes over time in macroinvertebrate assemblages and their distribution in space (the space–time interaction) in stream networks. Assemblages were sampled from every tributary, and every reach between tributaries, to determine effects of network position on assemblage composition, in four West Coast, South Island, New Zealand, headwater networks. Using canonical redundancy analysis, we found that macroinvertebrate assemblages were significantly spatially structured and species assemblages changed significantly between two sampling periods. The most important environmental variables (averaged over all AIC models) explaining change in assemblage composition were related to disturbance, local habitat/resources and habitat size. The lack of a significant interaction between space and time, however, indicated the spatial pattern of assemblages remained the same over time, regardless of changes in assemblage composition. Consistent spatial structuring could be the result of unchanging processes such as those arising from the universal nature of stream topology and hydrology acting both on habitat‐ and dispersal‐ related community processes. Thus, we conclude that although community assemblages changed over time, the spatial arrangement of communities could potentially be predicted from stream network topology and hydrology.     

Environmental and spatial effects on coastal stream fishes in the Atlantic rain forest

Contemporary and historical factors influence assemblage structure. The environmental and spatial influences acting on fish organization of rain forest coastal streams in the Atlantic rain forest of Brazil were examined. Fish (and functional traits such as morphology, diet, velocity preference, body size), environmental variables (pH, water conductivity, dissolved oxygen, temperature, stream width, flow, depth, substrate), and altitude were measured from 59 stream reaches. Asymmetric eigenvector maps were used to model the spatial structure considering direction of fish movements. Elevation played an important role—fish abundance, biomass, and richness all decrease with increasing elevation. Fish communities are influenced by both environmental and spatial factors, but downstream movements were shown to be more important in explaining the observed spatial variation than were bidirectional and upstream movements. Spatial factors, as well as environmental variables influenced by the spatial structure, explained most of the variation in fish assemblages. The strong spatial structuring is probably attributable to asymmetric dispersal limitation along the altitudinal profile: Dispersal is likely to be more limiting moving upstream than downstream. These fish assemblages reflect scale-dependent processes: At the stream-reach scale, fish respond to local environmental filters (habitat structure, water chemistry, and food supply), which are in turn influenced by a larger scale, namely the altitudinal gradient expected in steep coastal mountains. Thus, environmental drivers are not independent of spatial factors, and the effects of local factors can be confounded across the altitudinal gradient. These results may have implications for conservation, because downstream reaches are often neglected in management and conservation plans.     

河流鱼类分类群和功能群的纵向梯度格局——以新安江流域为例

确定鱼类群落的空间格局是保护和管理河流鱼类多样性的基础。尽管河流鱼类分类群（基于物种组成）的纵向梯度格局已得到大量报道,但其功能群（基于功能特征）的空间格局研究较少。以皖南山区新安江为研究流域,沿其"正源-下游"梯度共设置27个调查样点,分别于2017年5月和10月完成2次调查取样,着重研究了鱼类分类群和功能群结构的纵向梯度格局及其形成机制。共采集鱼类44种,可分为5个运动功能群和4个营养功能群,构成14个"营养-运动"复合功能群。双因素交互相似性分析结果显示,鱼类分类群和功能群均随河流级别显著变化,但两者均无显著的季节变化;根据相似性百分比分析,由1级至3级河流,数量优势物种和功能群的空间变化主要呈嵌套格局,而由3级至5级河流其变化主要呈周转格局。方差分解结果显示,局域栖息地、陆地景观和支流空间位置3类解释变量对分类群和功能群空间变化的解释率分别为33.6%和38.5%,其中,分类群受局域栖息地和支流空间位置变量的显著影响,而功能群受局域栖息地和陆地景观变量的显著影响。研究表明,沿着新安江的"上游-下游"纵向梯度,鱼类分类群和功能群的空间格局基本一致,但两者的形成机制不同：分类群的纵向梯度变化受环境过滤和扩散过程的联合影响,而功能群则主要受环境过滤影响。     

The biogeography and filtering of woody plant functional diversity in North and South America

Aim In recent years evidence has accumulated that plant species are differentially sorted from regional assemblages into local assemblages along local‐scale environmental gradients on the basis of their function and abiotic filtering. The favourability hypothesis in biogeography proposes that in climatically difficult regions abiotic filtering should produce a regional assemblage that is less functionally diverse than that expected given the species richness and the global pool of traits. Thus it seems likely that differential filtering of plant traits along local‐scale gradients may scale up to explain the distribution, diversity and filtering of plant traits in regional‐scale assemblages across continents. The present work aims to address this prediction. Location North and South America. Methods We combine a dataset comprising over 5.5 million georeferenced plant occurrence records with several large plant functional trait databases in order to: (1) quantify how several critical traits associated with plant performance and ecology vary across environmental gradients; and (2) provide the first test of whether the woody plants found within 1° and 5° map grid cells are more or less functionally diverse than expected, given their species richness, across broad gradients. Results The results show that, for many of the traits studied, the overall distribution of functional traits in tropical regions often exceeds the expectations of random sampling given the species richness. Conversely, temperate regions often had narrower functional trait distributions than their smaller species pools would suggest. Main conclusion The results show that the overall distribution of function does increase towards the equator, but the functional diversity within regional‐scale tropical assemblages is higher than that expected given their species richness. These results are consistent with the hypothesis that abiotic filtering constrains the overall distribution of function in temperate assemblages, but tropical assemblages are not as tightly constrained.     

Do isolation and local habitat jointly limit the structure of stream invertebrate assemblages?

1. Both local and regional processes simultaneously control species assemblages depending on spatial habitat configuration. In dendritic networks like streams, the unique spatial arrangement of habitats produces various combinations of local habitat size and isolation. Stream invertebrate assemblages could therefore be controlled by different combinations of local and regional processes, depending on their location in the network. 2. Using quantile regression, we investigated how local habitat size, local environmental conditions and spatial isolation influenced variation in assemblage composition. Adult Trichoptera and benthic macroinvertebrate assemblages were represented by non‐metric multidimensional scaling (NMDS) ordination scores, as were local environmental conditions, in four headwater stream networks in New Zealand. 3. With increasing local habitat size, there was a decrease in variation in assemblage composition (NMDS scores) of both adult Trichoptera and benthic macroinvertebrates. This relationship between habitat size and assemblage variation was related to local habitat conditions at the upper limit of assemblage variability and spatial isolation at the lower limit of assemblage variability, for both adult Trichoptera and benthic assemblages, indicating joint local and regional controls on stream invertebrate assemblages. 4. The relationships between local assemblages and their neighbours, based on community similarity scores, differed between benthic macroinvertebrates and adult Trichoptera. For benthic assemblages, the larger the stream, the more similar assemblages were to neighbouring assemblages, whereas there was no consistent relationship between assemblage similarity and stream size for adult Trichoptera. This difference in structuring could be attributed to contrasting spatial influences linked to the different dispersal modes of adults and larvae. However, because adult and benthic assemblages are not independent, the influence of life stage on spatial distribution is difficult to determine (i.e. it is essentially a ‘chicken and egg’ argument). 5. Overall, our approach using quantile regression to evaluate limit responses, rather than regressions on means, has highlighted the joint importance of local habitat and spatial processes in structuring stream invertebrate assemblages. Furthermore, we have provided evidence for the importance of the spatial network arrangement and interactions between life stages and dispersal processes, in structuring stream assemblages.     

Control of stream insect assemblages: roles of spatial configuration and local environmental factors

Abstract 1. Current views in ecology emphasise that community structure is the sum of multiple processes, with imprints of both regional and local drivers. However, the degree to which stream insect assemblages are structured by spatial configuration (complying with the dispersal‐based neutral hypothesis) and local environmental features (complying with the niche‐based species sorting hypothesis) has not been rigorously examined based on surveys in multiple years. 2. Stream sites in a boreal drainage system were surveyed during three consecutive years and the relative contribution of spatial configuration and local environmental variables to aquatic insect assemblage structure (characterised by both abundance and presence–absence data) was assessed. Separate analyses were conducted for mayflies (Ephemeroptera), stoneflies (Plecoptera), caddisflies (Trichoptera), and non‐biting midges (Diptera: Chironomidae) in each year. 3. There were no relationships between the spatial location and local environmental features of streams in Mantel tests, facilitating exploration of their independent effects on assemblage structure. The study found virtually no effects of spatial location on stream insect assemblages across the study drainage system, as evidenced by Mantel tests and canonical correspondence analyses (CCA). The environmental variables were also rather weakly associated with assemblage structure, with the total amount of explained variation ranging from 9.8% to 31.7% in the CCAs. There were no appreciable differences in the amount of environment‐related explained variation in assemblage structure between mayflies, stoneflies, caddisflies, and midges, but some between‐year differences were noticeable in most insect groups. The environmental variables that were significantly related to assemblage structure exhibited some between‐group and between‐year variability. In general, patterns shown by abundance and presence–absence data were highly similar. 4. It appears that stream insect assemblages comply with the niche‐based species sorting hypothesis in the context of metacommunity ecology. In contrast, the absence of spatial structuring suggests that stream insect assemblages do not comply with the neutral hypothesis, being not strongly dispersal limited at the within‐drainage basin scale.     

Comparative Environmental Assessment in the Studies of Benthic Diatom,Macroinvertebrate, and Fish Communities

Community response to environmental gradients operating at hierarchical scales was assessed in studies of benthic diatoms, macroinvertebrates and fish from 44 stream sites in the New York City watershed. Hierarchical cluster analysis (TWINSPAN) of diatoms and fish partitioned the study sites into four groups, i.e., acid streams, reservoir outlets and wetland streams, large eutrophic streams, and small eutrophic streams; macroinvertebrate TWINSPAN distinguished an additional group of silty eutrophic streams. The correspondence among the three assemblage TWINSPAN groupings was moderate, ranging from 51 to 57%. The similarity across the four major group types was the highest among large eutrophic stream and acid stream assemblages, and the lowest among small eutrophic stream assemblages. Stepwise discriminant function analysis revealed that environmental factors discriminated most effectively the diatom grouping and least effectively the fish grouping. The best environmental predictors for diatom and macroinvertebrate grouping were conductance and percent surface water, while population density was most powerful in separating the fish groups. Carbaryl was the only pesticide that correlated with macroinvertebrate grouping. Partial redundancy analyses suggested a differential dependence of freshwater communities on the scale of the environmental factors to which they respond. The role of small‐scale habitat and habitatland cover/land use interaction steadily increased across the diatom, macroinvertebrate, and fish assemblages, whereas the effect of large‐scale land cover/land use declined.     

A standardized assessment of forest mammal communities reveals consistent functional composition and vulnerability across the tropics

The understanding of global diversity patterns has benefitted from a focus on functional traits and how they relate to variation in environmental conditions among assemblages. Distant communities in similar environments often share characteristics, and for tropical forest mammals, this functional trait convergence has been demonstrated at coarse scales (110–200 km resolution), but less is known about how these patterns manifest at fine scales, where local processes (e.g. habitat features and anthropogenic activities) and biotic interactions occur. Here, we used standardized camera trapping data and a novel analytical method that accounts for imperfect detection to assess how the functional composition of terrestrial mammal communities for two traits – trophic guild and body mass – varies across 16 protected areas in tropical forests and three continents, in relation to the extent of protected habitat and anthropogenic pressures. We found that despite their taxonomic differences, communities generally have a consistent trophic guild composition, and respond similarly to these factors. Insectivores were found to be sensitive to the size of protected habitat and surrounding human population density. Body mass distribution varied little among communities both in terms of central tendency and spread, and interestingly, community average body mass declined with proximity to human settlements. Results indicate predicted trait convergence among assemblages at the coarse scale reflects consistent functional composition among communities at the local scale, suggesting that broadly similar habitats and selective pressures shaped communities with similar trophic strategies and responses to drivers of change. These similarities provide a foundation for assessing assemblages under anthropogenic threats and sharing conservation measures.     

Habitat filtering and adult dispersal determine the taxonomic composition of stream insects in an urbanizing landscape

相似文献   

Decreased habitat specialization in macroinvertebrate assemblages in anthropogenically disturbed streams

Habitat specialists are considered to be more sensitive to anthropogenic disturbance than habitat generalists. However, a number of studies have shown that habitat specialists can be tolerant to or even benefit from environmental degradation, suggesting that the effect of disturbance on distributions and abundances of habitat generalists and specialists can be unpredictable. In this study, we assessed the effects of anthropogenic disturbance on the degree of specialization of stream macroinvertebrates in boreal streams. We first measured the niche width for each macroinvertebrate species using the Outlying Mean Index (OMI) analysis and then, using independent data sets of near-pristine and anthropogenically altered streams, we examined the effects of human disturbances on stream macroinvertebrates with different tolerances to environmental conditions. As expected, human disturbance significantly decreased the level of the specialization in stream macroinvertebrate assemblages, and taxa with narrow environmental tolerances were more sensitive to disturbance than taxa with wide tolerances. Despite being more sensitive to disturbance, taxa with narrow environmental tolerances were locally more abundant than tolerant taxa in near-pristine streams, indicating their better performance in their optimal environments. However, many tolerant taxa decreased in their occurrence in disturbed streams, suggesting that habitat generalists also tend to negatively respond to disturbance. Species-rich assemblages harboured more taxa with narrow tolerances compared with species poor assemblages, suggesting a high conservation value of streams with diverse macroinvertebrate assemblages. Consistent with findings for many biological groups, our results indicate that macroinvertebrate species specialised in certain habitats are more sensitive to environmental degradation than habitat generalists. However, contrary to many previous studies, our results suggest that only a few species are likely to benefit from anthropogenic disturbance and, therefore, environmental degradation does not necessary result in macroinvertebrate assemblages composed of a few tolerant taxa.     

Development and assessment of indices to determine stream fish vulnerability to climate change and habitat alteration

Understanding the future impacts of climate and land use change are critical for long-term biodiversity conservation. We developed and compared two indices to assess the vulnerability of stream fish in Missouri, USA based on species environmental tolerances, rarity, range size, dispersal ability and on the average connectivity of the streams occupied by each species. These two indices differed in how environmental tolerance was classified (i.e., vulnerability to habitat alteration, changes in stream temperature, and changes to flow regimes). Environmental tolerance was classified based on measured species responses to habitat alteration, and extremes in stream temperatures and flow conditions for one index, while environmental tolerance for the second index was based on species’ traits. The indices were compared to determine if vulnerability scores differed by index or state listing status. We also evaluated the spatial distribution of species classified as vulnerable to habitat alteration, changes in stream temperature, and change in flow regimes. Vulnerability scores were calculated for all 133 species with the trait association index, while only 101 species were evaluated using the species response index, because 32 species lacked data to analyze for a response. Scores from the trait association index were greater than the species response index. This is likely due to the species response index's inability to evaluate many rare species, which generally had high vulnerability scores for the trait association index. The indices were consistent in classifying vulnerability to habitat alteration, but varied in their classification of vulnerability due to increases in stream temperature and alterations to flow regimes, likely because extremes in current climate may not fully capture future conditions and their influence on stream fish communities. Both indices showed higher mean vulnerability scores for listed species than unlisted species, which provided a coarse measure of validation. Our indices classified species identified as being in need of conservation by the state of Missouri as highly vulnerable. The distribution of vulnerable species in Missouri showed consistent patterns between indices, with the more forest-dominated, groundwater fed streams in the Ozark subregion generally having higher numbers and proportions of vulnerable species per site than subregions that were agriculturally dominated with more overland flow. These results suggest that both indices will identify similar habitats as conservation action targets despite discrepancies in the classification of vulnerable species. Our vulnerability assessment provides a framework that can be refined and used in other regions.     

Spatial patterns of the biological traits of freshwater fish communities in south‐west France

Spatial patterns in the combinations of biological traits of fish communities were studied in the Garonne River system (57 000 km², south‐west France). Fish species assemblages were recorded at 554 sampling sites, and the biological traits of species were described using a fuzzy‐coding method. A co‐inertia analysis of species distributions and biological traits identified some spatial patterns of species trait combinations. Fish species richness progressively increased from up‐ to downstream sections, and the longitudinal patterns of fish assemblages partitioned the river into clear biogeographic areas, such as the brown trout Salmo trutta (headwater streams), the grayling Thymallus thymallus , the barbel Barbus barbus and the bream Abramis brama zones (most downstream sections), which fitted with Huet's well‐known zonation for western European rivers. Only a few biological traits, chiefly related to life‐history attributes, significantly influenced the observed fish distributions. Fecundity, potential size, maximum age and reproductive factor increased from headwater to plain reaches. As a theoretical framework for assessing and predicting the functional organization of stream fish communities, spatial variations in species traits can be related to habitat conditions, thus providing explicit spatial schemes that may be useful to the design of both scientific studies and river management.