Does selective logging change ground‐dwelling beetle assemblages in a subtropical broad‐leafed forest of China?

Selective logging with natural regeneration is advocated as a near‐to‐nature strategy and has been implemented in many forested systems during the last decades. However, the efficiency of such practices for the maintenance of forest species are poorly understood. We compared the species richness, abundance and composition of ground‐dwelling beetles between selectively logged and unlogged forests to evaluate the possible effects of selective logging in a subtropical broad‐leafed forest in southeastern China. Using pitfall traps, beetles were sampled in two naturally regenerating stands after clearcuts (ca. 50 years old, stem‐exclusion stage: selectively logged 20 years ago) and two mature stands (> 80 years old, understory re‐initiation stage: selectively logged 50 years ago) during 2009 and 2010. Overall, selective logging had no significant effects on total beetle richness and abundance, but saproxylic species group and some abundant forest species significantly decreased in abundance in selectively logged plots compared with unlogged plots in mature stands. Beetle assemblages showed significant differences between selectively logged and unlogged plots in mature stands. Some environmental characteristics associated with selective logging (e.g., logging strategy, stand age, and cover of shrub and moss layers) were the most important variables explaining beetle assemblage structure. Our results conclude that selective logging has no significant impacts on overall richness and abundance of ground‐dwelling beetles. However, the negative effects of selective logging on saproxylic species group and some unlogged forest specialists highlight the need for large intact forested areas for sustaining the existence of forest specialist beetles.     

Effects of rain forest logging on species richness and assemblage composition of small mammals in Southeast Asia

Aim The effects of logging and habitat degradation on the richness and abundance of small mammals in Asian rain forests are largely unknown. This work compares the species richness, dominance and evenness of small non‐volant mammals between logged and unlogged forests, and assesses whether assemblage variability (β‐diversity) is similar between forest types. Location Southeast Asia, northern Borneo (Sabah, Malaysia), Sunda‐shelf. Methods We surveyed species‐rich assemblages of small non‐volant mammals in three unlogged and three logged forests for 2 years. At each forest site, we sampled a permanently marked transect and two additional sites in three trapping sessions. All analyses were performed at both levels to include the effects of local abundances and point estimates, separately from the relative abundances of species on a more regional scale. Results We trapped a total of 1218 individuals of 28 species. Eleven common species accounted for 95% of all captures. Species richness and diversity were significantly higher in unlogged forest (27 species) than in logged forest (17 species). This was mainly attributable to the smaller number of rarely recorded species in logged forest (five compared with 16 in unlogged forest, with a total of fewer than 10 captures). However, all common species were present in both logged and unlogged forests, and our analyses revealed similar patterns of dominance, evenness and fluctuations in abundance. Hence overall assemblage composition in multivariate space did not differ greatly between forest types. Assemblages of Muridae and Tupaiidae showed similar population fluctuations in space and time, indicating that the ecology of these taxa may be partially driven by the same environmental factors. Main conclusions Although species were distributed patchily within sites, analyses at local and regional scales revealed similar patterns in diversity and assemblage variability, suggesting that effects of forest modification did not differ extensively locally and regionally, but had a profound effect on rare species. Our results emphasize the importance and conservation value of logged forest stands that are able to hold a large proportion of the small mammals also found in unlogged forests. Rare and more specialized species are more vulnerable to forest degradation than commonly caught species, resulting in the complete loss, or a decrease in numbers, of certain groups, such as arboreal small mammals and Viverridae.     

Effects of Historical Selective Logging on Anuran Communities in a Wet Evergreen Forest,South India

Vast areas of tropical evergreen forests have been selectively logged in the past, and many areas continue to be logged. The impacts of such logging on amphibians are poorly understood. I examined the response of anuran communities to historical selective logging in a wet evergreen forest in south India. Anuran assemblages in unlogged forest were compared with assemblages in selectively logged forest. Forty 10 m × 10 m quadrats in forest, riparian zones, and streams of unlogged and selectively logged forests were searched at night for anurans. Species richness did not appear to be affected by logging. However, anuran density varied significantly and was 42 percent lower in selectively logged forests compared to unlogged forests. Anuran densities also varied significantly across microhabitats, with highest densities in streams of both selectively logged and unlogged forests. Patterns of niche overlap varied with selective logging as niche breadth either expanded, contracted, or remained neutral for different species. Ordination analysis explained 95 percent of the variation in species assemblage across selectively logged and unlogged forests. The assemblage in selectively logged forest was nested within unlogged forest. Among the habitat characteristics, litter thickness and water depth had the highest influence on the assemblage. This was followed by litter/water temperature, air temperature, and lastly relative humidity. It appears that species richness and composition of anurans in selectively logged forests is converging with unlogged forests, but the effects of historical logging seem to persist on anuran densities and their niche characteristics even ca 40 yr since logging ceased.     

Leaf-Litter Arthropods in Restored Forests in the Colombian Andes: A Comparison Between Secondary Forest and Tree Plantations

Tree monocultures of native and exotic species are frequently used as tools to catalyze forest recovery throughout the tropics. Although plantations may rapidly develop a canopy cover, they need to be evaluated as habitat for other organisms. We compared samples of leaf‐litter arthropods from two elevations in restored forest in the Colombian Andes. At the upper elevation (2,430 m), we compared native Andean alder (Alnus acuminata) plantation and secondary forest, and at the lower elevation (1,900 m) exotic Chinese ash (Fraxinus chinensis) plantation and secondary forest. Samples were obtained in two periods, March–April and September 1995. Species richness and abundance of arthropods were highest in secondary forest at the lower elevation. There were no differences in richness between both plantations and high‐elevation forest. Arthropod richness and abundance increased in the second sampling period in both secondary forest types and the ash plantation but not in the alder plantation, reflecting population recovery after the dry season. Alder leaf litter apparently buffered seasonal variations in arthropod richness and abundance. Composition of morphospecies was different among forest types. Although arthropod richness was lower in ash plantations compared to secondary forest, plantations still provided habitat for these organisms. On the other hand, the alder plantation was not different from secondary forest at the same elevation. At our site, plantations are embedded in a forested landscape. Whether our results apply to different landscape configurations and at different spatial scales needs to be established. The use of plantations as a restoration tool depends on the objectives of the project and on local conditions of forest cover and soils.     

Riparian Areas and Conservation of Herpetofauna in a Tropical Dry Forest in Western Mexico

Studies that assess the importance of riparian habitats in maintaining diversity of herpetofaunal assemblages in tropical dry forests are limited. We examined changes in abundance, diversity and composition of anuran, lizard and snake assemblages along stream edge–upslope gradients in conserved and disturbed areas of tropical dry forest on the Pacific coast of México. We sampled 659 plots in six watersheds over 2 yr. Two forest conditions (conserved and human disturbed, with three watersheds as replicates) were evaluated in the dry and rainy season. Within each watershed, plots were randomly located at three different distance categories from either stream edge: 0–10 m (near‐stream environment), 30–40 m (mid‐slope environment), and 50–60 m (upslope environment). Herpetofauna was surveyed by time‐constrained searches with a sampling effort of 1980 person‐hours. Eighteen anuran, 18 lizard and 23 snake species were recorded. Overall, abundance and diversity of lizards and snakes decreased from near‐stream to upslope areas in both forest conditions and seasons; while that of anurans followed this trend only for the conserved forest during the rainy season. Regardless of distance, abundance and diversity of anurans markedly decreased during the dry season, while that of snakes and lizards increased. Overall, our study shows that the importance of riparian areas for herpetofaunal conservation in dry tropical forests varies with forest condition and season.     

Effect of selective logging on forest structure and nutrient cycling in a seasonally dry Brazilian Atlantic forest

Aim The Brazilian Atlantic forest covers c. 10% of its original extent, and some areas are still being logged. Although several ecological studies in Atlantic forest have been published over the past two to three decades, there has been little research on forest dynamics and there is a particular lack of information on the effects of disturbance. The aim of the present study was to assess the impact of selective logging on forest structure, floristic composition soil nutrients, litterfall and litter layer in a seasonally dry Atlantic forest. Location The Mata do Carvão is located in the Guaxindiba Ecological Reserve in São Francisco do ltabapoana district (21°24′ S, 41°04′ W), Rio de Janeiro, Brazil. Methods Four plots (50 × 50 m) were set up in 1995 in each of two stands: unlogged and logged. In each plot, all trees ≥ 10 cm d.b.h. were enumerated, identified and measured. Vouchers were lodged at UENF Herbarium. Five surface soil samples were collected in each plot in the dry season (in October 1995). Litterfall was collected in eight traps (0.50 m²) in each plot over a year from 14 November 1995 to 11 November 1996. The litter layer was sampled in eight quadrats (0.25 m²) in each plot in the dry and wet seasons. Soils were air‐dried, sieved, and chemically analysed. The litter was dried (80 °C), sorted into six fractions, weighed and bulked samples analysed for nutrients. Results Forest stands did not differ in stem density and total basal area, with a total of 1137 individuals sampled in 1996 (564 unlogged and 573 logged), and a total basal area of 15 m² (unlogged) and 13.0 m² (logged). However, unlogged stands had more large trees (≥ 30 cm in d.b.h.) and greater mean canopy height. Among the families, Rutaceae and Leguminosae were the most abundant families in both sites, although the Rutaceae had a higher density in unlogged and Leguminosae in the logged stand. The species diversity index was similar between stands. Late‐successional species, such as Metrodorea nigra var. brevifolia and Paratecoma peroba, were less abundant in the logged stand. Selective logging did not affect nutrient concentrations in the soil or in the litter. However, quantities of the nutrients in the total litterfall and in the leaf litterfall and litter layer were higher in unlogged than in logged stands, mainly as a result of fallen M. nigra leaves. Metrodorea nigra was considered a key species in the nutrients dynamics in Carvão forest. Main conclusions Despite the fact that effects on tree diversity and soil nutrients were not clear, selective logging in this Atlantic forest altered canopy structure, increased the relative abundance of some early‐secondary species and decreased the litter input and stock of nutrients. Detailed information on the influence of logging on the distribution and structure of plant populations and in nutrient processes is fundamental for a sustainable logging system to be developed.     

Forest Regeneration in Logged and Unlogged Forests of Kibale National Park, Uganda

Processes of forest regeneration in two unlogged areas and in three areas that were logged nearly 25 years ago were quantified in Kibale National Park, Uganda. For forests to recover from logging, one would predict recruitment and growth processes to be accelerated in logged areas relative to unlogged areas, facilitating increased recruitment of trees into the adult size classes. We examined this prediction first by determining the growth of 4733 trees over a 51 to 56 month period and found that growth rates in the most heavily logged area were consistently slower than in the two unlogged areas. In contrast, the lightly logged forest had similar growth rates to unlogged areas in the small size classes, but trees in the 30 to 50 cm DBH size cohort exhibited elevated growth rates relative to the unlogged areas. Mortality was highest in the heavily logged areas, with many deaths occurring when healthy trees were knocked over by neighboring treefalls. We found no difference in the density or species richness of seedlings in the logged and unlogged forests. The number of seedlings that emerged from the disturbed soil (seed bank+seed rain) and initially seed-free soil (seed rain) was greater in the logged forest than in the unlogged forest. However, sapling density was lower in the heavily logged areas, suggesting that there is a high level of seedling mortality in logged areas. We suggest that the level of canopy opening created during logging, the lack of aggressive colonizing tree species, elephant activity that is concentrated in logged areas, and an aggressive herb community, all combine to delay vegetation recovery in Kibale Forest.     

The diversity of beetle assemblages in different habitat types in Sabah, Malaysia

The diversity of beetle assemblages in different habitat types (primary forest, logged forest, acacia plantation and oil palm plantation) in Sabah, Malaysia was investigated using three different methods based on habitat levels (Winkler sampling, flight-interception-trapping and mist-blowing). The overall diversity was extremely high, with 1711 species recorded from only 8028 individuals and 81 families (115 family and subfamily groups). Different degrees of environmental changes had varying effects on the beetle species richness and abundance, with oil palm plantation assemblage being most severely affected, followed by acacia plantation and then logged forest. A few species became numerically dominant in the oil palm plantation. In terms of beetle species composition, the acacia fauna showed much similarity with the logged forest fauna, and the oil palm fauna was very different from the rest. The effects of environmental variables (number of plant species, sapling and tree densities, amount of leaf litter, ground cover, canopy cover, soil pH and compaction) on the beetle assemblage were also investigated. Leaf litter correlated with species richness, abundance and composition of subterranean beetles. Plant species richness, tree and sapling densities correlated with species richness, abundance and composition of understorey beetles while ground cover correlated only with the species richness and abundance of these beetles. Canopy cover correlated only with arboreal beetles. In trophic structure, predators represented more than 40% of the species and individuals. Environmental changes affected the trophic structure with proportionally more herbivores (abundance) but fewer predators (species richness and abundance) in the oil palm plantation. Biodiversity, conservation and practical aspects of pest management were also highlighted in this study.     

Response of bird assemblages to windstorm and salvage logging — Insights from analyses of functional guild and indicator species

Natural disturbances, such as fire, windstorms and insect outbreaks, are important drivers of biodiversity in forest ecosystems, but at the same time cause large economic losses. Among the natural disturbances in Europe, windstorms cause the highest economic loss. After such storms, damaged forest stands are commonly salvage logged to restore economic value. However, such interventions could affect species assemblages of various taxonomic groups, including breeding birds. Despite these potential effects, investigations of the impacts of post-storm logging are largely lacking. We thus investigated assemblages of breeding birds in 21 logged and 21 unlogged windstorm-disturbed forest plots and 18 undisturbed, control forest plots using fixed-radius point-stop counts three, five and seven years after a windstorm within the Bavarian Forest National Park as part of the European Long-Term Ecosystem Research Network. We recorded 2100 bird individuals of 55 bird species. Bird assemblages were predominantly altered by the consequences of the windstorm and affected only to a minor degree by subsequent logging of storm-felled trees. Nevertheless, bird species richness was significantly reduced by post-storm logging within the first season. In general, the windstorm led to a shift in bird assemblage composition from typical forest species towards open- and shrub-land species. Assemblages of logged and unlogged disturbed plots consisted mainly of long-distance migrants and ground-foraging bird species, whereas assemblages of undisturbed control plots consisted of resident species that forage within vegetation. Both unlogged and logged storm-felled coniferous forest stands were inhabited by endangered or declining bird species, such as Water Pipit (Anthus spinoletta) on logged plots and Eurasian Redstart (Phoenicurus phoenicurus) on unlogged plots. Indicator species analyses suggested that species of unlogged storm disturbed plots depended on storm-created legacies, such as pits and snags, for foraging and nesting. Hence, we recommend reducing post-storm logging of these legacies to support species restricted to unlogged disturbed forest. To increase the diversity of breeding birds on the landscape scale, diverse logged and unlogged post-disturbance stands should be provided, which could be gained by a partial benign neglect strategy of storm disturbed forest stands.     

Impact of deforestation on the abundance,diversity, and richness of Culex mosquitoes in a southwest Cameroon tropical rainforest

Deforestation is a major threat to biodiversity but little data exist on how deforestation in real‐time affects the overall mosquito species community despite its known role in the transmission of diseases. We compared the abundance and diversity of Culex mosquitoes before and after deforestation along a gradient of three different anthropogenic disturbance levels in a tropical rainforest in southwestern Cameroon. The collections were conducted in unlogged forest (January, 2016), selectively logged forest (January, 2017), and within a young palm plantation (October, 2017) using net traps, sweep nets, resting traps, and dipping for immature stages in water bodies. Mosquitoes were morphologically identified to subspecies, groups, and species. A total of 2,556 mosquitoes was collected of which 1,663 (65.06%) belong to the genus Culex, (n=427 (25.68%) in the unlogged forest; n=900 (54.12%) in the selectively logged forest; and n=336 (20.2%) in the young palm plantation) with a significant difference among the habitats. Diversity and richness of mosquitoes varied significantly among habitats with the highest values found in the selectively logged forest (H=2.4; DS=0.87; S=33) and the lowest value in the unlogged forest (H=1.37; DS=0.68; S=13). The results of this study showed that deforestation affects the abundance and diversity of Culex mosquitoes and favors the invasion of anthropophilic mosquitoes. Higher mosquito abundance and diversity in the selectively logged forest than in the pristine forest is notable and some explanations for these differences are discussed.     

The avifauna 23 years after logging in Kibale National park, Uganda

The bird fauna of logged and unlogged forest in Kibale National Park, western Uganda were studied and comparisons made. Species diversity and richness were higher in the logged areas. A single species, the Yellow-whiskered Greenbul Andropadus latirostris dominated in the logged compartment. However, the majority of individual birds found in the logged forest were generalist or forest-edge species. Over 84% of the forest interior specialist species that occurred in primary forest had recolonized or persisted in the logged forest; however, there were seven out of 48 understorey forest specialists that had not done so. Although there was moderate species overlap between the two habitats, the logged forest compartment had not fully recovered from logging after 23 years.     

Burning and logging differentially affect endemic vs. widely distributed butterfly species in Borneo

We assess the differential impact of logging and ENSO (El Niño Southern Oscillation)-induced disturbance on the relative butterfly abundance and species richness of range-restricted and widespread species within the island of Borneo. Relative abundance and species richness were assessed using rarefaction and species accumulation curves in unburned isolates surrounded by burned forest, the burned forest itself, and continuous forest unaffected by ENSO-induced disturbance in addition to logged and unlogged landscapes in unburned forest. The relative abundance of endemics was significantly higher in unlogged forest than logged forest and significantly higher in unburned forest than burned forest. Rarefied species richness of range categories was similar (Bornean endemics) or higher (other categories) in selectively logged than unlogged forest. In contrast, rarefied species richness of range-restricted species was highest in continuous forest, intermediate in unburned isolates, and lowest in burned forest. Only two individuals of a single Bornean endemic species were found in all the burned forest. Although species richness was higher in all range categories in continuous forest than in unburned isolates and in burned forest, the difference was most pronounced for range-restricted species. Logging and ENSO-induced fires thus have contrasting effects on range-restricted species. While both increase the relative abundance of widely distributed species at the expense of range-restricted species, only ENSO-induced disturbance lowers the rarefied number of restricted range species. Our research highlights the threat that severe ENSO events pose to geographically restricted classes of biodiversity.     

Diversity and Abundance of Litter Frogs in a Montane Forest of Southeastern Brazil: Seasonal and Altitudinal Changes1

We sampled litter frogs in an 1800-ha mid-elevation seasonal forest in southeastern Brazil. One hundred 8 * 8-m plots were sampled during the dry/cold season and wet/warm season (unburned areas); we also examined the effects of fire in recently burned areas. A total of 267 frogs (305 g), belonging to 16 species (4 families) were caught. A single species comprised 78.5 percent of the individuals in the dry/cold season and 54.3 percent in the wet/warm season. The density of individuals did not change significantly with season, biomass did. Density and biomass of frogs were positively correlated with altitude. A Mantel test indicated that biological data (species and their abundance) were significantly associated with environmental parameters. The burned areas showed low values in richness, density and biomass of frogs. Harsh seasonal climate and a history of human disturbance may produce the low observed diversity values. The greater densities of frogs in sites of higher elevation may primarily result from mist-generated humidity, which diminishes the harshness of the dry/cold season in relation to lower sites.     

Seasonal changes in the canopy arthropod fauna in Rinorea beniensis in Budongo Forest,Uganda

Arthropods were collected by insecticidal tree fogging on the understorey tree species Rinorea beniensis Engler (Violaceae) in Budongo Forest, a seasonal rain forest in Uganda. Eight trees were fogged in adjacent plots of primary, selectively logged and swamp forest during the wet season and again in the dry season. In all forest types, Psocoptera, parasitoid Hymenoptera, and especially Formicidae and Auchenorrhyncha were more abundant during the dry season, while Ensifera, Heteroptera, Lepidoptera, Diptera, and Coleoptera were more abundant during the wet season. Seasonal change in arthropod composition was very low in the swamp forest located near a stream, where permanent water supply is crucial for the development of the distinct swamp vegetation, with comparatively constant microclimatic conditions all over the year. Seasonal change increased in the primary forest, and shows most significant changes of athropod abundance between dry and wet season in the selectively logged forest which also had the highest heterogeneity in forest structures. Especially small and soft bodied arthropods probably accumulate along a humidity gradient in the dense canopies of Rinorea during the dry season, when the forest floor outside the swamp forest is dry. This effect, which is also strongest in the selectively logged forest, leads to a much higher density of canopy dwelling arthropods during the dry season.     

The spatial configuration of taxonomic biodiversity along a tropical elevational gradient: α‐, β‐, and γ‐partitions

Biodiversity at larger spatial scales (γ) can be driven by within‐site partitions (α), with little variation in composition among locations, or can be driven by among‐site partitions (β) that signal the importance of spatial heterogeneity. For tropical elevational gradients, we determined the (a) extent to which variation in γ is driven by α‐ or β‐partitions; (b) elevational form of the relationship for each partition; and (c) extent to which elevational gradients are molded by zonation in vegetation or by gradual variation in climatic or abiotic characteristics. We sampled terrestrial gastropods along two transects in the Luquillo Mountains. One passed through multiple vegetation zones (tabonuco, palo colorado, and elfin forests), and one passed through only palm forest. We quantified variation in hierarchical partitions (α, β, and γ) of species richness, evenness, diversity, and dominance, as well as in the content and quality of litter. Total gastropod abundance linearly decreased with increasing elevation along both transects, but was consistently higher in palm than in other forest types. The gradual linear decline in γ‐richness was a consequence of opposing patterns with regard to α‐richness (monotonic decrease) and β‐richness (monotonic increase). For evenness, diversity, and dominance, α‐partitions and γ‐partitions evinced mid‐elevational peaks. The spatial organization of gastropod biodiversity did not mirror the zonation of vegetation. Rather, it was molded by: (a) elevational variation in productivity or nutrient characteristics, (b) the interspersion of palm forest within other forest types, and (c) the cloud condensation point acting as a transition between low and high elevation faunas. Abstract in Spanish is available with online material.     

Diversity of pselaphine beetles (Coleoptera: Staphylinidae: Pselaphinae) in eastern Thailand

Pselaphine beetles (Coleoptera: Staphylinidae: Pselaphinae) are cosmopolitan, species‐rich, and yet poorly studied, particularly in the tropics. We sampled beetles in three types of primary forest and two types of disturbed forest habitats in eastern Thailand to assess the utility of pselaphine beetles as bioindicators of forest disturbance. We simultaneously measured leaf litter mass, soil moisture, soil acidity and canopy cover at each site to infer which environmental factors affect pselaphine beetle diversity and abundance. At each site, pselaphine beetles were extracted from ten 1 m² samples of leaf litter and soil with Tullgren funnels. We sampled 1867 adult beetles representing six supertribes, 51 genera and 114 morphospecies; 7% of the genera and 92% of the species were undescribed. Forest types differed significantly in species richness, abundance, diversity and evenness. Primary forest had greater numbers of species and individuals, and higher diversity indices (H′). Teak plantation and secondary forest had substantially fewer individuals and species of pselaphine beetles. Species composition differed between primary and degraded forests. Canopy cover, soil moisture, and leaf litter mass positively correlated with beetle species richness and abundance. Leaf litter mass and soil moisture were the two most important factors affecting the diversity of pselaphine beetle assemblages. Among the 114 morphospecies collected, 43 morphospecies were specific to two or three habitats and 64 morphospecies were found only in a single habitat. Thus pselaphine beetles appear to have rather narrow habitat requirements and their presence/absence was correlated with environmental differences. These traits make pselaphine beetles a suitable bioindicator taxon for assessing forest litter diversity and monitoring habitat change.     

Natural regeneration of selected timber species in the Republic of Congo

Natural regeneration of timber species is critical to the sustainable management of tropical forests. To understand what determines regeneration success of timber species in the Congo Basin, we evaluated whether seedling recruitment rates differed between forest logged 30 years previously and unlogged forest and determined the environmental factors that influence seedling density, growth and survival. We monitored the fate of 2186 seedlings of seven timber species within 462, 25‐m² plots located along 21 transects. We characterized seedling plots by light availability, soil nutrient availability and pH, and abundance of mammalian herbivores and then used linear and generalized linear mixed models to evaluate the variables that influenced seedling density, growth and survival. Light availability and canopy openness were 18% and 81% higher in logged than unlogged forest, and concentration of soil nutrients varied between sites. Seedling density was 32% higher in unlogged than logged forest. Taking all species together, seedling survival was positively correlated with calcium and negatively with magnesium and available phosphorus. Rates of seedling growth increased with available light. Taken separately, seedlings of the selected timber species responded differently to abiotic and biotic factors, demonstrating species‐specific regeneration requirements.     

The Impact of Selective-Logging and Forest Clearance for Oil Palm on Fungal Communities in Borneo

Tropical forests are being rapidly altered by logging, and cleared for agriculture. Understanding the effects of these land use changes on soil fungi, which play vital roles in the soil ecosystem functioning and services, is a major conservation frontier. Using 454-pyrosequencing of the ITS1 region of extracted soil DNA, we compared communities of soil fungi between unlogged, once-logged, and twice-logged rainforest, and areas cleared for oil palm, in Sabah, Malaysia. Overall fungal community composition differed significantly between forest and oil palm plantation. The OTU richness and Chao 1 were higher in forest, compared to oil palm plantation. As a proportion of total reads, Basidiomycota were more abundant in forest soil, compared to oil palm plantation soil. The turnover of fungal OTUs across space, true β-diversity, was also higher in forest than oil palm plantation. Ectomycorrhizal (EcM) fungal abundance was significantly different between land uses, with highest relative abundance (out of total fungal reads) observed in unlogged forest soil, lower abundance in logged forest, and lowest in oil palm. In their entirety, these results indicate a pervasive effect of conversion to oil palm on fungal community structure. Such wholesale changes in fungal communities might impact the long-term sustainability of oil palm agriculture. Logging also has more subtle long term effects, on relative abundance of EcM fungi, which might affect tree recruitment and nutrient cycling. However, in general the logged forest retains most of the diversity and community composition of unlogged forest.     

Differences in the Effects of Selective Logging on Amphibian Assemblages in Three West African Forest Types

Making generalizations about the impact of commercial selective logging on biodiversity has so far remained elusive. Species responses to logging depend on a number of factors, many of which have not been studied in detail. These factors may include the natural forest conditions (forest types) under which logging impacts are investigated; but this question has so far remained unexamined. In a large‐scale replicate study we aimed at clarifying the relationship between logging and forest types on leaf litter frogs. We contrast three distinct and naturally occurring forest types, including wet evergreen, moist evergreen and semi‐deciduous forests. Selectively logged sites were compared with primary forest sites for each forest type. We found that the response of frog communities to logging varies in different forest types. In the wet evergreen forest, richness was higher in logged forest than primary forest, while diversity measures were not different between logged and primary forest habitats. In the moist evergreen, richness and diversity were higher in selectively logged areas compared with primary forest habitats. In the semi‐deciduous, logged forests were characterized by drastic loss of forest specialists, reduced richness, and diversity. These results indicate that the net effect of logging varies with respect to forest type. Forest types that are characterized by adverse climatic conditions (i.e., low rainfall and protracted dry seasons) are more likely to produce negative effects on leaf litter anuran communities. For comparisons of the impact of logging on species to be effective, future research must endeavor to include details of forest type.     

Effects of selective logging on the arboreal ants of a Bornean rainforest

We examined the effect of selective logging and corresponding forest canopy loss on arboreal ant diversity in a tropical rainforest. Arboreal ants were collected from an unlogged forest plot and from forest plots selectively logged 14 years and 24 years earlier in Danum Valley, Sabah, Malaysia, using a canopy fogging method. Selective logging was associated with a significant decrease in canopy cover and an increase in understory vegetation density relative to unlogged forest. Our study showed that selective logging in primary forest might not dramatically decrease total species number and overall abundance of arboreal ants; however, it may influence the species composition and dominance structure of the ant community, accompanied by an increase in abundance of shrub‐layer species and trophobiotic species. In view of the results of this study, management techniques that minimize logging impact on understory vegetation structure are likely to help maintain the conservation value of logged forests for arboreal ants. Our results also suggest that accurate assessment of the impacts on biodiversity should not be based only on measurement of species number and overall abundance, but also on analysis of species composition and community structure.