Morphological characterization of the asexual reproduction in the acorn worm Balanoglossus simodensis

The acorn worm Balanoglossus simodensis reproduces asexually by fragmentation and subsequent regeneration from the body fragments. We examined the morphogenesis of its asexual reproduction. At first, we collected asexually reproducing specimens and observed their morphogenesis. Then, we succeeded in inducing the asexual reproduction artificially by cutting the worm at the end of the genital region. The process of morphogenesis is completely the same between naturally collected and artificially induced specimens. The stages during morphogenesis were established on the basis of the external features of the asexually reproducing fragments. The internal features of the fragments were also examined at each stage. In a separate phase of the study, the capacity for regeneration of some body parts was also examined by dividing intact worms into about 10 fragments. Although the capacity for regeneration varied among the different body parts, some fragments regenerated into complete individuals in 1 month. The process of regeneration was the same as that in the asexually produced fragments.     

Membrane morphogenesis from cloned fragments of bacteriophage PM2 DNA that contain the sp6.6 gene

The formation of new membrane vesicles normally occurs during eukaryotic organellogenesis and maturation of bacteriophage PM2. This virus was studied as a simple model for membrane morphogenesis. Previous biochemical and genetic studies suggest that a major structural protein of PM2, sp6.6, is an integral membrane protein involved in viral membrane morphogenesis. To establish the necessity of sp6.6 in membrane formation, restriction fragments of PM2 that contained the sp6.6 coding sequence were cloned into several plasmid vectors for expression in Escherichia coli. A construction in pBR322 containing two HindIII fragments of PM2 DNA caused production of intracellular membrane vesicles of the same size as those produced in the course of natural infection of Alteromonas espejiana. Similar results were obtained with a smaller construct of HindIII fragments in the plasmid vector pPL-lambda. Expression of sp6.6 was detected via incorporation of 35S-labeled methionine after SDS-polyacrylamide gel electrophoresis and with a specific rabbit antiserum on immunoblots. Other constructs did not produce recognizable vesicles or sp6.6. These results are the first to suggest that a hydrophobic membrane protein can cause development of new membrane structure.     

寄主植物对桑寄生植物叶片功能性状的影响

为了解寄生植物叶片功能性状的差异及其影响因素,研究了西双版纳地区寄主植物对3种桑寄生植物叶片功能性状的影响,并分析了桑寄生植物与寄主植物叶片功能性状的相关性。结果表明,不同寄主植物的相同寄生植物叶片功能性状存在显著差异,来自7种寄主植物的五蕊寄生(Dendrophthoe pentandra)的叶片含水量(61.2%～70.1%)、氮含量(9.6～16.0 g/kg)、碳氮比(30.8～48.5)以及缩合单宁含量(3.3%～11.0%)等性状的差异较大;从4种寄主植物上获取的澜沧江寄生(Scurrula chingii var.yunnanensis)的叶片含水量(60.0%～71.7%)、碳含量(431.3～502.3 g/kg)和缩合单宁含量(3.8%～9.9%)等性状也呈现较大种间差异,而在2种寄主植物上的离瓣寄生(Helixanthera parasitica)的叶片功能性状没有显著差异。桑寄生植物与寄主植物的叶片含水量、总碳含量、总氮含量、碳氮比和缩合单宁含量呈显著的正相关。寄主植物作为桑寄生植物营养物质的主要来源,会影响桑寄生植物叶片的相应功能性状。桑寄生植物能从寄主植物获...     

植物miR159家族成员分子特性及其进化规律研究

为了解植物miR159家族成员的分子特性及其进化规律,该研究对miRBase数据库中登录的miR159家族成员进行分类统计、进化树构建、科间比较、二级结构预测及靶基因分析。结果表明:miR159家族在植物界分布非常广泛,蕨类植物可能是miR159家族的进化祖先;系统发育进化树分析显示,植物miR159家族成员间存在多个进化分支,且进化关系与植物属性有关,即植物亲缘关系越近的成员更易成枝,且具有相同进化方向的成员序列高度同源;Mfold预测显示,pre-miR159均会自发形成典型、稳定的茎环二级结构,并包含19~21个碱基为单位的功能片段,每个单位均有可能形成miR159成熟体;靶基因分析发现,miR159家族成员主要作用于MYB转录因子、转座因子和假定蛋白等,但在不同物种间及相同物种的不同成员间作用的靶标种类与靶基因ID数量均存在差异,尤其是miR159-3p与miR159-5p间的差异最为显著。     

THE USE OF PLASTID DNA RESTRICTION ENDONUCLEASE PATTERNS IN DELINEATING RED ALGAL SPECIES AND POPULATIONS1

Plastid DNA band patterns generated by electrophoresis of endonuclease digests demonstrate remarkable conservation of DNA sequences at the species and subspecies level in flowering plants. Generally, patterns are identical or near-identical from different populations belonging to the same species. This methodology has now been applied to red algae to ascertain its value in systematic studies. Plastid DNA from nine bangiophycean and florideophycean red algae was isolated and cut with restriction endonucleases that recognize different 6-base pair sequences. The patterns generated upon the electrophoretic separation of digestion fragments show that within a species patterns are identical, but not within higher taxa. The proper identification of one Gracilaria population of uncertain taxonomic affinity was clearly established by this method of plastid DNA analysis. Differences between species in plastid DNA sequences were confirmed by probing blots of restriction fragments with known gene sequences. A number of heterologous plastid DNA probes were found to be sufficiently homologous to be useful in studying red algal DNA. Unexpectedly, supercoiled circular plasmids ranging in size from ca. 1.5–8 kb were found in some red algal species but not in others. The position of these plasmids in agarose gels following electrophoresis is uniform within a species but differs between different species of the same genus, contributing further patterns for taxonomic analysis.     

Effect of forest fragmentation on dung beetle communities and functional consequences for plant regeneration

I compared dung beetle communities and assessed some of their functional effects (dung removal, seed burial, seedling establishment) in continuous forest with those in 1-ha and 10-ha forest fragments in Central Amazonia. I followed the fate of seeds until seedling establishment for three native tree species, using clean seeds and seeds surrounded by dung. The 1-ha fragments had half the number of dung beetle species captured in continuous forest and in 10-ha fragments. The continuous forest sites and the 1-ha fragments had similar number of individuals, but in the 10-ha fragments dung beetles were twice as abundant. Mean beetle size increased with increasing forest area. Dung removal and seed burial rates were higher in continuous forest than in forest fragments. Seed predation rates were higher in the forest fragments. In all sites, the proportion of seedlings established from seeds surrounded by dung vs clean seeds was the same, and it was the same in continuous forest vs fragments. When comparing seeds that remained on the forest floor with seeds buried by dung beetles, a higher percentage of seedlings established from the latter. Conservation programs that aim to maintain the regeneration ability of forest fragments must incorporate all the important components involved in seedling establishment; in Central Amazonia these include dung beetles as secondary dispersers. It is important that studies start measuring directly not only the first-order effects of forest fragmentation on species, but also the higher-order functional effects.     

Intrinsic Protein Phosphorylation in Synaptosomal Plasma Membrane Fragments: A Comparison of Cerebral Cortex Tissue from Several Species, Including Human Biopsy Specimens

Intrinsic protein phosphorylation was studied in synaptosomal membrane fragments made from cerebral cortex tissue taken from the following species: human (biopsy specimens), ox, rat, rabbit, guinea pig and mouse. Membrane fragments from all species exhibited a qualitatively similar range of protein acceptors phosphorylated by cyclic AMP-dependent protein kinase activity; contrary to a previous report, no evidence for cyclic GMP-dependent protein kinase activity was found in the human material. With the exception of membrane fragments prepared from ox brain, all the preparations exhibited the same range of Ca2+-dependent protein kinase activity. Ox brain obtained from a slaughterhouse yielded membranes containing no Ca2+-dependent protein kinase activity, but this may have been due to unavoidable postmortem losses.     

Urbanization increases floral specialization of pollinators

Understanding how urbanization alters functional interactions among pollinators and plants is critically important given increasing anthropogenic land use and declines in pollinator populations. Pollinators often exhibit short‐term specialization and visit plants of the same species during one foraging trip. This facilitates plant receipt of conspecific pollen—pollen on a pollinator that is the same species as the plant on which the pollinator was foraging. Conspecific pollen receipt facilitates plant reproductive success and is thus important to plant and pollinator persistence. We investigated how urbanization affects short‐term specialization of insect pollinators by examining pollen loads on insects’ bodies and identifying the number and species of pollen grains on insects caught in urban habitat fragments and natural areas. We assessed possible drivers of differences between urban and natural areas, including frequency dependence in foraging, species richness and diversity of the plant and pollinator communities, floral abundance, and the presence of invasive plant species. Pollinators were more specialized in urban fragments than in natural areas, despite no differences in the species richness of plant communities across site types. These differences were likely driven by higher specialization of common pollinators, which were more abundant in urban sites. In addition, pollinators preferred to forage on invasive plants at urban sites and native plants at natural sites. Our findings reveal indirect effects of urbanization on pollinator fidelity to individual plant species and have implications for the maintenance of plant species diversity in small habitat fragments. Higher preference of pollinators for invasive plants at urban sites suggests that native species may receive fewer visits by pollinators. Therefore, native plant species diversity may decline in urban sites without continued augmentation of urban flora or removal of invasive species.     

Negative impacts of human land use on dung beetle functional diversity

The loss of biodiversity caused by human activity is assumed to alter ecosystem functioning. However our understanding of the magnitude of the effect of these changes on functional diversity and their impact on the dynamics of ecological processes is still limited. We analyzed the functional diversity of copro-necrophagous beetles under different conditions of land use in three Mexican biosphere reserves. In Montes Azules pastures, forest fragments and continuous rainforest were analyzed, in Los Tuxtlas rainforest fragments of different sizes were analyzed and in Barranca de Metztitlán two types of xerophile scrub with different degrees of disturbance from grazing were analyzed. We assigned dung beetle species to functional groups based on food relocation, beetle size, daily activity period and food preferences, and as measures of functional diversity we used estimates based on multivariate methods. In Montes Azules functional richness was lower in the pastures than in continuous rainforest and rainforest fragments, but fragments and continuous forest include functionally redundant species. In small rainforest fragments (<5 ha) in Los Tuxtlas, dung beetle functional richness was lower than in large rainforest fragments (>20 ha). Functional evenness and functional dispersion did not vary among habitat types or fragment size in these reserves. In contrast, in Metztitlán, functional richness and functional dispersion were different among the vegetation types, but differences were not related to the degree of disturbance by grazing. More redundant species were found in submontane than in crassicaule scrub. For the first time, a decrease in the functional diversity in communities of copro-necrophagous beetles resulting from changes in land use is documented, the potential implications for ecosystem functioning are discussed and a series of variables that could improve the evaluation of functional diversity for this biological group is proposed.     

海洋纤毛虫--水滴伪康纤虫的口器发生及形态学重描述

利用蛋白银法对采自山东胶州育虾池的一种海洋盾纤类纤毛虫,水滴伪康纤虫(Pseudocohnilembus persalinus Evans&Thompson,1964)的口器发生过程进行了详细的观察和研究,并对其形态学做了补足性描述。文章通过对该青岛种群发生过程的研究,认为前人所报道的种群(Evans&Thompson,1964;Pomp&Wilbert,1988)缺乏对某个发生关键时期的观察而存在着错误,即:后仔虫的小膜2明确来自老的口侧膜,而不是前人报道的盾片。此外,文章还发现该种的发生与本属另一哈氏伪康纤虫的发生过程几乎完全相同。主要细胞发生过程为:盾片最先增殖,形成初级原基区,然后分裂成前后两部分,前部分最终消失,而后部分最终形成后仔虫的小膜3。继盾片增殖之后口侧膜的锯齿状结构沿细胞纵轴方向分裂成两列,右侧的一列增殖形成次级原基区,之后分裂成前后两部分,前部分迁移形成后仔虫的口侧膜和盾片,后部分形成后仔虫的小膜1和小膜2;老口侧膜的残余部分形成前仔虫的口侧膜及盾片。老的小膜1、小膜2和小膜3则完全为前仔虫所继承。     

七株昆虫核型多角体病毒基因组同源性的测定

应用限制性内切酶图谱分析法,结合Southern印迹法和核酸杂交技术,对茶毛虫、棉蛉虫,油桐尺蠖、斜纹夜蛾以及蓖麻蚕等5种昆虫的7株核型多角体病毒DNA,进行了基因组同源性测定。结果表明,不同种昆虫多角体病毒DNA的酶切图谱不相同,DNA片段与不同源的DNA标记探针之间无杂交带出现。而同种昆虫病毒的不同分离株间,除少数DNA片段的电泳迁移率稍有不同,以及出现一些互不相同的亚克分子带之外,它们的DNA酶切图谱基本一致,並且几乎所有片段都可与同种的标记探钟杂交。对一些DNA片段迁移率的改变及亚克分子带出现的原因进行了讨论。     

Assessment of cytochrome P450 sequences offers a useful tool for determining genetic diversity in higher plant species

To investigate and develop new genetic tools for assessing genome-wide diversity in higher plant-species, polymorphisms of gene analogues of mammalian cytochrome P450 mono-oxygenases were studied. Data mining on Arabidopsis thaliana indicated that a small number of primer-sets derived from P450 genes could provide universal tools for the assessment of genome-wide genetic diversity in diverse plant species that do not have relevant genetic markers, or for which, there is no prior inheritance knowledge of inheritance traits. Results from PCR amplification of 51 plant species from 28 taxonomic families using P450 gene-primer sets suggested that there were at least several mammalian P450 gene mammalian-analogues in plants. Intra- and inter- specific variations were demonstrated following PCR amplifications of P450 analogue fragments, and this suggested that these would be effective genetic markers for the assessment of genetic diversity in plants. In addition, BLAST search analysis revealed that these amplified fragments possessed homologies to other genes and proteins in different plant varieties. We conclude that the sequence diversity of P450 gene-analogues in different plant species reflects the diversity of functional regions in the plant genome and is therefore an effective tool in functional genomic studies of plants.Communicated by C. Möllers     

Paleontological evidence for membrane fusion between a unit membrane and a half-unit membrane

Membrane fusion is of fundamental importance for many biological processes and has been a topic of intensive research in past decades with several models being proposed for it. Fossils had previously not been considered relevant to studies on membrane fusion. But here two different membrane fusion patterns are reported in the same well-preserved fossil plant from the Miocene (15-20 million years old) at Clarkia, Idaho, US. Scanning electron microscope, transmission electron microscope, and traditional studies reveal the vesicles in various states (even transient semi-fusion) of membrane fusion, and thus shed new light on their membrane structure and fusion during exocytoses. The new evidence suggests that vesicles in plant cells may have not only a unit membrane but also a half-unit membrane, and that a previously overlooked membrane fusion pattern exists in plant cells. This unexpected result from an unexpected material not only marks the first evidence of on-going physiological activities in fossil plants, but also raises questions on membrane fusion in recent plants.     

Palaeontological evidence for membrane fusion between a unit membrane and a half-unit membrane

Membrane fusion is of fundamental importance for many biological processes and has been a topic of intensive research in past decades with several models being proposed for it. Fossils had previously not been considered relevant to studies on membrane fusion. But here two different membrane fusion patterns are reported in the same well-preserved fossil plant from the Miocene (15–20 million years old) at Clarkia, Idaho, US. Scanning electron microscope, transmission electron microscope, and traditional studies reveal the vesicles in various states (even transient semi-fusion) of membrane fusion, and thus shed new light on their membrane structure and fusion during exocytoses. The new evidence suggests that vesicles in plant cells may have not only a unit membrane but also a half-unit membrane, and that a previously overlooked membrane fusion pattern exists in plant cells. This unexpected result from an unexpected material not only marks the first evidence of on-going physiological activities in fossil plants, but also raises questions on membrane fusion in recent plants.     

岷江干旱河谷25种植物一年生植株根系功能性状及相互关系

相同条件下相同生长期的植物根系生长与适应策略及其差异性还不清楚。因此,采集岷江干旱河谷地区25种乡土植物(木本15/草本10种)的种子于2009年3月播种在同一干旱环境中,9月测定了1年生植株的最大根深(RDmax)、根幅(RW)与根生物量(RB),计算了总根长(TRL)、比根长(SRL)及细/粗根生物量比(RBf/c),分析了它们之间的关系,进行了根系功能组划分。结果表明:1)25种植物1年生植株RDmax与RW变异较小,总变异率为14.9%和20.7%;TRL和SRL变异相对较大,分别为28.5%和34.7%,草本植物SRL明显大于木本植物;RB和RBf/c种间变异较大,总变异率分别为50.1%和70.5%;2)25种植物的RDmax、RW、RB和TRL间呈显著正相关关系,表明根系较深的物种RW较大,TRL和RB也较高;SRL与RDmax呈极显著负相关关系,与RBf/c呈极显著正相关关系,表明根系垂直分布较浅的物种细根发达,SRL较大;3)主成分分析显示,25种植物可分为3个功能组:第1组具有较大RDmax、RW和RB,资源利用持续时间较长;第2组具有较大TRL、SRL和RBf/c,资源利用效率较高;第3组根系功能性状没有一致的突出特点,可能通过降低自身生理机能适应生存条件。综合分析表明,岷江干旱河谷区25种植物1年生植株根系的功能性状变异明显,可塑性大,历经长期自然选择压力而形成了不同的环境适应策略,但生长型并不必然表达出1年生植株根系功能性状的差异性。     

Selective targeting of plasma membrane and tonoplast traffic by inhibitory (dominant-negative) SNARE fragments

Vesicle traffic underpins cell homeostasis, growth and development in plants, and is facilitated by a superfamily of proteins known as SNAREs [soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptors] that interact to draw vesicle and target membrane surfaces together for fusion. Structural homologies, biochemical and genetic analyses have yielded information about the localization and possible roles of these proteins. However, remarkably little evidence is yet available that speaks directly to the functional specificities of these proteins in selected trafficking pathways in vivo. Previously, we found that expressing a cytosolic (so-called Sp2) fragment of one plasma membrane SNARE from tobacco and Arabidopsis had severe effects on growth, tissue development and secretory traffic to the plasma membrane. We have explored this dominant-negative approach further to examine the specificity and overlaps in Sp2 activity by generating a toolbox of truncated SNARE constructs and antibodies for transient expression and analysis. Using a quantitative ratiometric approach with secreted green fluorescent protein (secGFP), we report here that traffic to the plasma membrane is suppressed selectively by Sp2 fragments of plasma membrane SNAREs AtSYP121 and AtSYP122, but not of the closely related SNARE AtSYP111 nor of the SNARE AtSYP21 that resides at the pre-vacuolar compartment (PVC). By contrast, traffic of the YFP-tagged aquaporin fusion protein TIP1;1-YFP to the tonoplast was blocked (leading to its accumulation in the PVC) when co-expressed with the Sp2 fragment of AtSYP21, but not when co-expressed with that of AtSYP121. Export of secGFP was also sensitive to the Sp2 fragment of the novel, plant-specific SNARE AtSYP71 that was recently found to be present in detergent-resistant, plasma membrane fractions. Co-incubation analyses of the plasma membrane SNAREs with the regulatory subdomain included within the Sp2 fragments showed activity in destabilizing protein complexes, but only with the complementary SNAREs. We conclude that the Sp2 fragment action accurately reflects the known specificity and targeting of these SNAREs, implies functional overlaps that are of potential physiological interest, and underscores the use of a dominant-negative strategy in functional studies of a major subfamily of SNAREs in plants.     

Relationships among development, ecology, and morphology in the evolution of Echinoderm larvae and life cycles

The evolution of life cycles involves transitions between discrete states in one or more of the characters that comprise a developmental pattern. In this paper, we examine three of the major life cycle characters and the states for these characters. Using examples from echinoderms, we discuss the evolutionary transitions that have occurred in the type of morphogenesis, developmental habitat, and mode of nutrition during development. We evaluate the functional requirements associated with these transitions to infer the likelihood (frequency or rapidity) of change in a given character and of biases in the polarity of character state transitions. Using comparisons of closely related species, we evaluate the change between states in one character for dependence on the state of, or correlated changes in, other characters. Based on our analysis of congeneric species that differ in developmental habitat, we conclude that the transition between pelagic and benthic development is an ecological change that is independent of changes in morphogenesis and should be reversible. In contrast, the transition from feeding to nonfeeding development has been considered to be irreversible because it involves marked changes in larval morphology. We re-examine the transition between different modes of larval nutrition in light of recent studies that show that there exists a continuum of nutritional strategies between planktotrophy and lecithotrophy. This continuum is largely determined by variation in maternal investment and does not involve alterations in larval morphology. We suggest that the boundary between planktotrophy and lecithotrophy is frequently crossed and that this transition is reversible. Ecological changes represent the crossing of a functional threshold. Only after crossing the threshold, do larvae experience qualitatively different selective pressures that can lead to subsequent changes in morphology and development. Two different changes have occurred in the type of morphogenesis: the simplification of larval morphology that is associated with obligate (nonfeeding) lecithotrophy and the loss of the larval body plan in the evolution from indirect to direct development. It is the modification of morphology independent of the ecological changes that requires alterations in developmental processes, constrains evolutionary options, imposes irreversibility, and establishes the discrete nature of larval patterns in marine invertebrates.