鸡mir-17-92基因簇的结构、功能及其调控

mir-17-92基因簇(mir-17-92 cluster)是脊椎动物的一个保守miRNA基因簇,在哺乳动物细胞增殖、分化、凋亡及发育等多种生物学过程中起重要的调控作用.同时,mir- 17-92基因簇又是一个癌基因,在多种肿瘤中表达.尽管对mir-17-92基因簇的研究非常广泛,但其作用机制还不完全清楚.鸡mir- 17-92基因簇的结构组成特点、功能及其作用机制尚未见研究报道.该文根据同一miRNA基因簇的miRNAs在功能上相关的特点,以鸡mir- 17-92基因簇序列为研究对象,采用生物信息学研究方法和手段,开展了鸡mir- 17-92基因簇的基因组结构、miRNAs序列组成、靶生物学过程和信号通路以及miRNAs结合位点分布特点等分析研究.结果发现,鸡mir- 17-92基因簇调控MAPK、Wnt和TGF-β等多个重要细胞信号通路;miRNA结合位点分布分析显示,该miRNA基因簇多个成员共同作用于同一个靶基因,提示该基因簇的miRNAs成员以组合和协同的方式调控靶基因.该研究为深入了解mir-17-92基因簇如何调控癌症和发育中的关键细胞过程奠定了基础.     

miRiad roles for the miR-17-92 cluster in development and disease

MicroRNAs (miRNAs) encoded by the miR-17-92 cluster and its paralogs are known to act as oncogenes. Expression of these miRNAs promotes cell proliferation, suppresses apoptosis of cancer cells, and induces tumor angiogenesis. New work reveals essential functions for these miRNAs not only in tumor formation but also during normal development of the heart, lungs, and immune system.     

miR-17-92基因簇microRNAs对哺乳动物器官发育及肿瘤发生的调控

microRNAs(miRNAs)是近年发现的一种高度保守的非编码小RNA, 它们通过抑制靶基因mRNA的翻译或将其降解, 在转录后水平调控基因的表达, 参与调控哺乳动物多个器官的发育过程和人类疾病的发生。miR-17-92基因簇是一个高度保守的基因簇, 编码miR-17-5p、miR-17-3p、miR-18a、miR-19a、miR-20a、miR-19b-1和miR-92-1等7个miRNAs。大量证据表明, miR-17-92基因簇miRNAs参与了心、肺、免疫系统的发育、血管生长及前脂肪细胞的分化等过程。此外, miR-17-92基因簇miRNAs在多种肿瘤中高表达, 能作为致癌基因诱发淋巴瘤和血管化肿瘤的发生, 但它也可以作为抑癌基因抑制乳腺癌细胞的增殖。文章对miR-17-92基因簇miRNAs在哺乳动物器官发育及肿瘤发生中的作用进行综述     

鸡miR-17-92基因簇上游调控区功能分析

miR-17-92基因簇(miR-17-92 cluster)在细胞增殖、分化、凋亡、动物发育以及肿瘤发生等过程中发挥重要作用。目前,人和小鼠等哺乳动物miR-17-92基因簇的转录调控已有深入研究,但该基因簇在鸡等鸟类中的转录调控研究还未见报道,主要原因在于鸟类miR-17-92基因簇上游的基因组序列都存在一个gap,且该基因簇启动子的位置和序列也还不清楚。为此,本研究采用染色体步移的方法获得鸡miR-17-92基因簇上游gap区序列,并采用生物信息学分析和报告基因及截短突变技术开展该gap区的功能分析。染色体步移分析发现,鸡miR-17-92基因簇上游gap区全长1704 bp,GC含量达80.11%。生物信息学分析显示,鸡miR-17-92基因簇上游gap区内1段200 bp的序列与人、牛、小鼠等9种动物miR-17-92基因簇上游序列保守性较高,且该区域为人和小鼠等哺乳动物miR-17-92基因簇宿主基因的核心启动子区。将克隆的gap区序列插入pGL3 basic荧光素酶报告基因载体,构建成启动子荧光素酶报告基因载体pGL3-cMIR17HG(-4228/-2506)。荧光素酶报告基因活性分析表明,pGL3-cMIR17HG(-4228/-2506)报告基因的活性是pGL3 basic空载体活性的417倍,证明所克隆的gap区片段是鸡miR-17-92基因簇宿主基因的启动子。为进一步分析该启动子的结构和功能,构建gap区片段的5°端缺失突变(缺失448 bp)和3°端缺失突变(缺失894 bp)的荧光素酶报告基因载体。与pGL3-cMIR17HG(-4228/-2506)相比,5°端和3°端缺失突变分别使启动子报告基因活性降低19.82%和60.14%。这些数据提示,鸡miR-17-92基因簇宿主基因启动子的重要调控区位于-3400/-2506。本研究结果为进一步开展鸡miR-17-92基因簇的转录调控奠定了基础。     

Mapping and expression studies of the mir17-92 cluster on pig Chromosome 11

We have identified the first porcine microRNA (miRNA) cluster (the mir17-92 cluster) and localized it to the q-arm of pig Chromosome 11. The miRNA cluster was found by sequence similarity search with human miRNA sequences against the pig genomic data generated within the Sino-Danish pig genome project. The resulting data contained three complete and two incomplete miRNA precursors of seven miRNAs from the human mir17-92 cluster. Because there is a 100% sequence identity between the four pig miRNAs and the corresponding human miRNAs, the sequences of three unavailable pig miRNAs were derived from the human data. The expression profiles of seven studied miRNAs were analyzed by hybridization to Northern blots containing five porcine tissues: cerebellum, cortex, hippocampus, kidney, and liver. In order to determine the localization of the mir17-92 cluster in the pig genome, we mapped it by PCR in the porcine somatic cell hybrid (SCH) panel and in the INRA-University of Minnesota (INRA-UMN) porcine radiation hybrid (IMpRH) panel. The PCR results enabled us to localize this cluster to the q-arm of pig Chromosome 11 and map it in relation to two microsatellites. Our study presents the first expression analyses of miRNAs in pig and adds information for further functional studies in this species.     

鸡miR-17-92基因簇靶基因ZFPM2的鉴定及功能分析

miR-17-92基因簇在哺乳动物的许多生理和病理过程中发挥重要作用。本实验室前期研究发现,miR-17-92基因簇促进鸡前脂肪细胞的增殖,但其作用机制尚不清楚。为了揭示miR-17-92基因簇促进鸡前脂肪细胞增殖的作用机制,本研究采用CCK-8细胞增殖检测方法分析干扰ZFPM2对前脂肪细胞的影响,结果发现,干扰ZFPM2能显著促进鸡前脂肪细胞的增殖(P<0.01);与CCK-8分析结果相一致,干扰ZFPM2可致使细胞增殖标志基因PCNA、Ki67、Cyclin D1的mRNA表达量明显升高(P<0.01或P<0.05)。进一步对鸡ZFPM2基因进行生物信息学分析,发现该基因mRNA的3′UTR有两个区域存在miR-17-92基因簇4个成员(miR-17-5p、miR-20a、miR-19a及miR-19b)的潜在结合位点。为验证miR-17-92基因簇是否靶作用于鸡ZFPM2基因,构建了鸡ZFPM2基因3′UTR区的荧光素酶报告基因载体(野生型)(psi-CHECK2-ZFPM2-3′UTR-WT)及其突变型的荧光素酶报告基因载体(psi-CHECK2-ZFPM2-3′UTR-MUT)。报告基因活性分析显示,过表达mi-17-92基因簇能极显著地抑制野生型ZFPM2的报告基因活性(P<0.01);转染miR-17-5p、miR-20a及miR-19a的抑制剂均能显著地提高野生型ZFPM2报告基因的活性(P<0.01或 P<0.05),但这些抑制剂对突变型ZFPM2报告基因的活性无明显影响。qRT-PCR分析发现,miR-17-5p、miR-19a及miR-20a的抑制剂能显著提高内源性ZFPM2基因mRNA的表达水平(P<0.01或P<0.05)。共转染分析发现,尽管差异不显著,但miR-17-5p和miR-19a的抑制剂均倾向于降低ZFPM2干扰片段的促细胞增殖作用。本研究结果表明：miR-17-92基因簇成员miR-17-5p、miR-20a、miR-19a及miR-19b靶作用于ZFPM2;miR-17-92基因簇至少部分通过抑制ZFPM2基因表达从而促进鸡前脂肪细胞的增殖。     

MicroRNA-17-92与肿瘤

microRNA是一类在生物体中广泛表达的、非编码调节性小分子RNA(约22～24nt).它们一经问世,即被发现参与多种疾病的发生.miR-17-92及其旁系同源序列就是其中之一,它们已被证实在肺、心脏及免疫系统的正常发育及肿瘤形成中均起到重要作用.本文从miR-17-92及其旁系同源序列在不同肿瘤组织中的表达及其在肿瘤发生中的分子机制,对这一基因簇与肿瘤发生的关系进行综述.     

MiR-17-92 cluster regulates cell proliferation and collagen synthesis by targeting TGFB pathway in mouse palatal mesenchymal cells

Elongation and elevation of palatal shelves, mainly caused by proliferation and extra-cellular matrix synthesis of palatal mesenchymal cells (PMCs), are essential for normal palatal development. Transforming growth factor beta (TGFB) pathway could induce proliferation inhibition and collagen synthesis in PMCs. Recent studies found that miRNA-17-92 (miR-17-92) cluster, including miR-17, miR-18a, miR-19a, miR-20a, miR-19b, and miR-92a, expressed in the 1st bronchial arch of mouse embryos during the period of palatal shelf elongation and elevation, and directly targeted TGFB pathway in cancer cell lines. Whether miR-17-92 cluster expresses and targets TGFB pathway in PMCs has not yet been studied. Using quantitative real-time RT-PCR, we found that miR-17-92 expressed in PMCs and decreased from embryonic day (E) 12 to E14 in palatal shelves. MTT assay and Western blot showed that miR-17-92 inhibited TGFB1 induced proliferation inhibition and collagen synthesis in PMCs by decreasing TGFBR2, SMAD2, and SMAD4 protein level. Further luciferase assay showed that miR-17 and miR-20a directly targeted 3′UTR of TGFBR2, and that miR-18a directly targeted 3′UTR of SMAD2 and SMAD4. We thus conclude that miR-17-92 cluster could inhibit TGFB pathway induced proliferation inhibition and collagen synthesis in PMCs by directly targeting TGFBR2, SMAD2, and SMAD4.     

Loss of mir-146a function in hormone-refractory prostate cancer

The pattern of microRNA (miRNA) expression is associated with the degree of tumor cell differentiation in human prostate cancer. MiRNAs bind complementarily to either oncogenes or tumor suppressor genes, which are consequently silenced, resulting in alterations of tumorigenecity. We have detected eight down-regulated and three up-regulated known miRNAs in androgen-independent human prostate cancer cells compared to those in androgen-dependent cells, using miRNA microarray analyses. These identified miRNAs showed the same expression patterns in hormone-refractory prostate carcinomas (HRPC) compared to androgen-sensitive noncancerous prostate epithelium as determined by fluorescent in situ hybridization assays in human prostate cancer tissue arrays. One of the eight down-regulated miRNAs, mir-146a, was selected and constitutively expressed to examine its effects on suppression of prostate cancer transformation from androgen-dependent to -independent cells as determined by in vitro tumorigenecity assays. Transfection of mir-146a, which perpetually express the miRNA, suppressed >82% of the expression of the targeted protein-coding gene, ROCK1, in androgen-independent PC3 cells, consequently markedly reducing cell proliferation, invasion, and metastasis to human bone marrow endothelial cell monolayers. Given that ROCK1 is one of the key kinases for the activation of hyaluronan (HA)-mediated HRPC transformation in vivo and in PC3 cells, mir-146a may function as a tumor-suppressor gene in modulating HA/ROCK1-mediated tumorigenecity in androgen-dependent prostate cancer.