Exploring the decline of oyster beds in Atlantic Canada shorelines: potential effects of crab predation on American oysters (<Emphasis Type="Italic">Crassostrea virginica</Emphasis>)

Atlantic Canada’s American oyster (Crassostrea virginica) beds, while economically and ecologically important, have been in decline over the past few decades. Predation by crabs, in particular by the European green crab (Carcinus maenas), has been proposed as one of the potential causes of such decline. Hence, this study examined oyster mortality levels in multiple beds across Prince Edward Island (PEI) and then experimentally assessed the contribution of green crab predation to oyster mortality. Results from surveys conducted in 10 estuaries across PEI in 2014 indicate that the probability of mortality for small oysters was significantly higher when green crabs were present then in areas without green crabs. This probability of mortality was significantly less when there was the presence of alternative prey like natural mussel beds (Mytilus edulis). The odds of oyster mortality were also higher when beds had rock crabs (Cancer irroratus) compared to beds with no rock crabs. Given the potential importance of green crab predation, its influence was assessed in 2015 using two field experiments with tethered oysters. Our results indicate that odds of small oyster mortality occurring were much higher in green crab inclusion cages than in the open environment and the exclusion cages. These results reaffirm that oysters up to ~40 mm SL are vulnerable to predation, and at least some of the mortality affecting these oysters can be causally attributed to green crab predation. Green crab predation rates upon small oysters are relevant given the economic benefits and ecosystem services provided by these bivalves. They highlight the need for the industry to consider mitigation measures and potentially adapt their oyster growing strategies.     

Influence of differences in <Emphasis Type="Italic">Ppd</Emphasis> genes on agronomic indicators of soft winter wheat

The dominant alleles of the Ppd genes tend to reduce the length of the time to heading, decrease winter hardiness and frost resistance at the end of winter, and also promote a significant growth in yield and growth in individual components of the yield. In terms of the degree of reduction of winter hardiness and frost resistance in years with severe winters and the increase in the yield in years with mild wintering conditions, the dominant alleles may be arranged in the following sequence: Ppd-Ala — Ppd-Bla — Ppd-Dla. In tall-growing genotypes the effects of the Ppd genes are directed towards reducing the height of the plant, while in intermediate-height genotypes, towards increasing the plant height.     

Wadden Sea mussel beds invaded by oysters and slipper limpets: competition or climate control?

Introduced species are often considered to be a threat to residents, but not all reciprocal trends may reflect species interaction. In the northern German Wadden Sea, native mussel Mytilus edulis beds are declining and overgrown by introduced Pacific oysters Crassostrea gigas and slipper limpets Crepidula fornicata. We review the population development of the three species and analyse whether the invading species may be responsible for the decline of native mussels. The Pacific oyster predominately settles on mussel beds in the intertidal and the slipper limpet dominates around low water line. We compare the development of mussels and invaders in two subregions: mussel beds near the islands of Sylt and Amrum decreased both in the presence (Sylt) and absence (Amrum) of the two invading species and more detailed investigations could not confirm a causal relationship between the increasing invaders and decreasing mussel beds. There is evidence that the decline of mussel beds is mainly caused by failing spatfall possibly due to mild winters, whereas the increase in slipper limpets and oysters is facilitated by mild winters and warm summers, respectively. We conclude that changing species composition is a result of the climatic conditions in the last decade and that there is no evidence yet that the exotic species caused the decline of the natives. It remains an open question whether the species shift will continue and what the consequences for the native ecosystem will be.     

At the rainbow’s end: high productivity fueled by winter upwelling along an Arctic shelf

Herein we document findings from a unique scientific expedition north of Svalbard in the middle of the polar night in January 2012, where we observed an ice edge north of 82°N coupled with pronounced upwelling. The area north of Svalbard has probably been ice-covered during winter in the period from approximately 1790 until the 1980s, a period during which heavy ice conditions have prevailed in the Barents Sea and Svalbard waters. However, recent winters have been characterized by midwinter open water conditions on the shelf, concomitant with northeasterly along-shelf winds in January 2012. The resulting northward Ekman transport resulted in a strong upwelling of Atlantic Water along the shelf. We suggest that a reduction in sea ice and the upwelling of nutrient-rich waters seen in the winter of 2012 created conditions similar to those that occurred during the peak of the European whaling period (1690–1790) and that this combination of physical features was in fact the driving force behind the high primary and secondary production of diatoms and Calanus spp., which sustained the large historical stocks of bowhead whales (Balaena mysticetus) in Arctic waters near Spitsbergen.     

Summer Ichthyoplankon in Onega Bay of the White Sea: Species Composition and Spatial Distribution

Data on the species composition and distribution of ichthyoplankton in Onega Bay of the White Sea are presented for June–July 2007, 2010–2012, and 2015–2016. In the ichthyoplankton, the specimens of the early developmental stages of 21 fish species were registered; the larvae of the White Sea herring Clupea pallasi marisalbi, capelin Mallotus villosus, and Pacific sand lance Ammodytes hexapterus were the most abundant. It is shown that the northwestern and southeastern zones, distinguished in Onega Bay by hydrophysical parameters, also differ in species composition and in ichthyoplankton abundance.     

A new deep-sea hydroid (Cnidaria: Hydrozoa) from the Bering Sea Basin reveals high genetic relevance to Arctic and adjacent shallow-water species

The marine benthic fauna in Arctic shallow-water is reported to be a relatively young assemblage by species of either Pacific or Atlantic affinity. Whether current deep-sea Pacific species are included in the affinity or not is unknown. Combining morphological comparisons and genetic analyses, a new deep-sea hydroid to science, Sertularia xuelongi sp. nov. (Cnidaria: Hydrozoa: Sertulariidae), is described from the northern margin of the Bering Sea Basin at depths of 800–1570 m collected in 2010. It is characterized by slender and zigzag-shaped hydrocauli, alternately arranged hydrothecae and the absence of distal-lateral horns in fully matured female gonothecae. Its distribution, currently known only from Bering Sea Basin, suggests that it could not be an Arctic species with Pacific affinity. However, phylogenetic analyses based on the mitochondrial 16S rRNA gene show that it is clustered into a distinctive clade with four closely related species recorded from shallow-water of Northwest France, Iceland, Chukchi Sea and/or Bering Sea. In addition, its sequence similarity is highly relevant to these four species: Sertularia argentea (98.6 %), S. cupressina (98.8 %), S. plumosa (98.8 %) and S. robusta (99.4 %). All these provide a new insight into the relevance of North Pacific deep-sea species to the benthic fauna in Arctic and adjacent shallow-water. The taxonomic restriction of the genus Sertularia and the re-validation of the genus Polyserias are discussed. Future researches on more deep-sea species from Pacific and/or Atlantic are required to understand the evolution and speciation pattern involved in polar relevance.     

High survival and growth rates of introduced Pacific oysters may cause restrictions on habitat use by native mussels in the Wadden Sea

Pacific oysters Crassostrea gigas (Thunberg, 1793) were introduced to the northern Wadden Sea (North Sea, Germany) by aquaculture in 1986 and finally became established. Even though at first recruitment success was rare, three consecutive warm summers led to a massive increase in oyster abundances and to the overgrowth of native mussel beds (Mytilus edulis L.). These mussels constitute biogenic reefs on the sand and mud flats in this area. Survival and growth of the invading C. gigas were investigated and compared with the native mussels in order to predict the further development of the oyster population and the scope for coexistence of both species. Field experiments revealed high survival of juvenile C. gigas (approximately 70%) during the first three months after settlement. Survival during the first winter varied between > 90% during a mild and 25% during a cold winter and was independent of substrate (i.e., mussels or oysters) and tide level. Within their first year C. gigas reached a mean length of 35-53 mm, and within two years they grew to 68-82 mm, which is about twice the size native mussels would attain during that time. Growth of juvenile oysters was not affected by substrate (i.e., sand, mussels, and other oysters), barnacle epibionts and tide level, but was facilitated by fucoid algae. By contrast, growth of juvenile mussels was significantly higher on sand flats than on mussel or oyster beds and higher in the subtidal compared to intertidal locations. Cover with fucoid algae increased mussel growth but decreased their condition expressed as dry flesh weight versus shell weight. High survival and growth rates may compensate for years with low recruitment, and may therefore allow a fast population increase. This may lead to restrictions on habitat use by native mussels in the Wadden Sea.     

Otolith variation in Pacific herring (<Emphasis Type="Italic">Clupea pallasii</Emphasis>) reflects mitogenomic variation rather than the subspecies classification

Pacific herring (Clupea pallasii) is divided into three subspecies: two in northeast Europe and one in the north Pacific Ocean. Genetic studies have indicated that the populations in northeast Europe have derived from the northwest Pacific herring recently, or during the last 10–15 kyr, and that they are distinct from the population in the northeast Pacific. In addition, hybridization between the Pacific herring and the Atlantic herring has been documented. Otolith variation has been considered to be largely affected by environmental variation, but here we evaluate whether the genetic differentiation is reflected in otolith shape differences. A clear difference in otolith shape was observed between the genetically differentiated herring species Clupea harengus from the Atlantic and C. pallasii. The otolith shape of C. p. suworowi in the Barents Sea was different from the shape of C. pallasii in northern Norway and C. p. pallasii from the Pacific. Populations of C. p. pallasii, sampled east and west of the Alaska Peninsula, which belong to two genetically different clades of the C. p. pallasii in the Pacific Ocean, show a clear difference in otolith shape. C. p. suworowi and the local C. pallasii peripheral population in Balsfjord in northern Norway are more similar to the northwest Pacific herring (C. p. pallasii) than to the northeast Pacific herring (C. p. pallasii), both genetically and in otolith shape. The Balsfjord population, known to be influenced by introgression of mtDNA from the Atlantic herring, does not show any sign of admixture in otolith shape between the two species. A revised classification, considering the observed genetic and morphological evidence, should rather group the northwest Pacific herring in the Bering Sea together with the European populations of C. pallasii than with the northeast Pacific herring in the Gulf of Alaska.     

The species composition,morphology, and seasonal distribution of diatoms of the genus <Emphasis Type="Italic">Attheya</Emphasis> West, 1860 from the Sea of Japan

Six species that belong to the diatom genus Attheya were found in the Russian waters of the Sea of Japan. A. cf. flexuosa is a new record for the seas of Russia. A. decora is recorded for the first time for the Sea of Japan. The peculiarities of the morphology of A. decora and A. cf. flexuosa are described and illustrated. The study of the seasonal distribution, abundance, and ecology of Attheya species in the northwestern Sea of Japan showed that A. longicornis and A. ussurensis were the most numerous and widespread species, reaching maximum densities (up to 1.5 × 10⁶ and 1.8 × 10⁴ cells/liter, respectively) in the spring, summer, and fall. A. cf. flexuosa and A. septentrionalis were rare and were found in low numbers in the winter and early spring. Based on the ultrastructure of the girdle bands, the form and number of chloroplasts, the presence/absence of rimoportula on the valve, and habitat features, we distinguished two groups of species of the genus Attheya from the Sea of Japan. The first group includes psammophytes A. decora, A. arenicola, and A. ussurensis; the second one comprises A. longicornis and A. cf. flexuosa epiphytic on other diatoms, as well as A. septentrionalis, which is found in the under-ice plankton and is able to attach to the underside of ice.     

Expression and DNA methylation pattern of reproduction-related genes in partially fertile triploid Pacific oysters <Emphasis Type="Italic">Crassostrea gigas</Emphasis>

Partial or complete sterility is an obvious feature in triploid Pacific oyster (Crassostrea gigas) which contributes to improving rearing performances. Despite the significance of sterility, the molecular mechanism behind it remains elusive and related research was limited. This study focused on six reproduction-related genes and compared their different behavior in gene expression and DNA methylation pattern between triploid and diploid oysters in order to provide more molecular information. The gonadal development of triploid oyster was examined by histology before molecular analysis. Gametogenesis disturbance was observed in triploid oysters at different development stages (stage II and III) with more serious impairment in females. QPCR showed significant gene expression difference between diploid and triploid in two genes: putative Vg and cgER. Gene expression of putative Vg was delayed in triploids while for cgER triploid oyster showed higher expression and the difference was significant at stage III. DNA methylation pattern of these two genes were further investigated by bisulfite sequencing. Between diploid and triploid oysters, no difference was observed in total methylation level but some individual loci showed different patterns: significantly high methylation rate of loci 2284 in cgER was observed in triploid oyster which has a higher expression of this gene. This study indicated that putative Vg and cgER might play a role in partial sterile in triploid C. gigas. Gene expression could be regulated by the methylation pattern at specific individual locus, which deserves equivalent attention as well as total DNA methylation level.     

Cold tolerance and invasive potential of the redbay ambrosia beetle (<Emphasis Type="Italic">Xyleborus glabratus</Emphasis>) in the eastern United States

Native Lauraceae (e.g. sassafras, redbay) in the southeastern USA are being severely impacted by laurel wilt disease, which is caused by the pathogen Raffaelea lauricola T. C. Harr., Fraedrich and Aghayeva, and its symbiotic vector, the redbay ambrosia beetle (Xyleborus glabratus Eichhoff). Cold temperatures are currently the only viable limitation to the establishment of X. glabratus in northern populations of sassafras. The observed lower lethal temperature of X. glabratus (? 10.0 °C) is warmer than its supercooling point (? 22.0 °C), indicating the beetle is a freeze intolerant and chill susceptible species. Empirically derived X. glabratus lower lethal temperature thresholds were combined with host distribution and microhabitat-corrected climate data to produce species distribution models for X. glabratus in the eastern USA. Macroclimate data (30-year mean annual minimum temperature) were corrected (? 1.2 °C) to account for thermal buffering afforded to X. glabratus while living inside sassafras trees. Only 0.1% of the current US sassafras spatial extent experiences sufficiently harsh winters (locales where mean annual minimum winter temperatures ≤ ? 6.2 °C for ≥ 12 h) to exclude X. glabratus establishment in our species distribution model. Minimum winter temperatures will likely cause some X. glabratus mortality in ~ 52% of the current spatial extent of sassafras, although current data do not allow a quantification of X. glabratus mortality in this zone. Conversely, ~ 48% of the current spatial extent of sassafras is unlikely to experience sufficiently cold winter temperatures to cause any significant impediment to X. glabratus spread or establishment. A modest climate change scenario (RCP4.5) of + 1.4 °C would result in 91% of the current spatial extent of sassafras in the eastern USA occurring where winter minimum temperatures are unlikely to cause any mortality to X. glabratus.     

Population structure and variability of Pacific herring (<Emphasis Type="Italic">Clupea pallasii</Emphasis>) in the White Sea,Barents and Kara Seas revealed by microsatellite DNA analyses

Pacific herring, Clupea pallasii, have recently colonised the northeast Atlantic and Arctic Oceans in the early Holocene. In a relatively short evolutionary time, the herring formed a community with a complex population structure. Previous genetic studies based on morphological, allozyme and mitochondrial DNA data have supported the existence of two herring subspecies from the White Sea and eastern Barents and Kara Seas (C. p. marisalbi and C. p. suworowi, respectively). However, the population structure of the White Sea herring has long been debated and remains controversial. The analyses of morphological and allozyme data have previously identified local spawning groups of herring in the White Sea, whereas mtDNA markers have not revealed any differentiation. We conducted one of the first studies of microsatellite variation for the purpose of investigating the genetic structure and relationship of Pacific herring among ten localities in the White Sea, the Barents Sea and the Kara Sea. Using classical genetic variance-based methods (hierarchical AMOVA, overall and pairwise F _ST comparisons), as well as the Bayesian clustering, we infer considerable genetic diversity and population structure in herring at ten microsatellite loci. Genetic differentiation was the most pronounced between the White Sea (C. p. marisalbi) versus the Barents and Kara seas (Chesha–Pechora herring, C. p. suworowi). While microsatellite variation in all C. pallasii was considerable, genetic diversity was significantly lower in C. p. suworowi, than in C. p. marisalbi. Also, tests of genetic differentiation were indicating significant differentiation within the White Sea herring between sympatric summer- and spring-spawning groups, in comparison with genetic homogeneity of the Chesha–Pechora herring.     

Distribution and vertical fluxes of silicoflagellates,ebridians, and the endoskeletal dinoflagellate <Emphasis Type="Italic">Actiniscus</Emphasis> in the western Arctic Ocean

Spatial and temporal variations in major phytoplankton populations such as diatoms in the changing Arctic Ocean have been well studied, whereas only a few monitoring studies have been conducted on minor siliceous flagellates. To discern the relationship between hydrographic conditions and the spatio-temporal distribution of silicoflagellates, ebridians, and the endoskeletal dinoflagellate Actiniscus pentasterias, we analyzed seawater and bottom-tethered sediment-trap samples from the western Arctic Ocean. Silicoflagellates and ebridians were commonly observed in shelf waters around the southern Chukchi Sea in September–October during 2010 and 2013. However, one mesoscale patch with abundant silicoflagellates and ebridians was observed in the southwestern Canada Basin during September–October 2010. This offshore patch reflected an unusual occurrence of a mesoscale eddy deriving from the Alaskan Coastal Water. The active lateral transport of shelf materials by eddies was also evident in high silicoflagellate and ebridian fluxes at station Northwind Abyssal Plain (NAP) (75°N, 162°W, 1975-m water depth) in November–December during 2010 and 2011. The summer silicoflagellate flux at station NAP was mainly composed of Distephanus speculum. During the sea-ice cover period, except for July, silicoflagellates D. medianoctisol and D. octonarius were relatively abundant in the assemblage. The spike in D. speculum flux during July 2011 was observed with fecal pellets containing abundant silicoflagellates, suggesting a temporal silicoflagellate contribution to some kinds of zooplankton. The common occurrence of A. pentasterias in settling particles at station NAP during the winter may indicate their tolerance to cold water under sea ice.     

Preadaptation of <Emphasis Type="Italic">Formica aquilonia</Emphasis> and <Emphasis Type="Italic">Formica lugubris</Emphasis> ants (Hymenoptera,Formicidae) to low wintering temperatures in Northeast Asia

The ants Formica aquilonia and F. lugubris which inhabit the entire forest zone of the North Palaearctic and are absent from the basins of the Yana, Indigirka, and Kolyma rivers were found in the coastal area of the Sea of Okhotsk. A possible climatic conditionality of their occurrence in the Northeast is considered based on the data on the biotopic distribution of ants, the temperature causation of their overwintering, and cold hardiness. On the Sea of Okhotsk coast, these ants overwinter at a depth of 40–200 cm in the soil. During winter, the minimum soil temperature at a depth of 40 cm under the anthill was ?5°C. The supercooling temperature of F. aquilonia was not lower than ?20.2 ± 0.5°C, that of F. lugubris, not lower than ?19.6 ± 0.4°C. Half of F. aquilonia individuals did not survive the daily exposure at ?13°C, F. lugubris, at ?16°C. These two cold-resistant species could inhabit some biotopes of the Kolyma River basin, similar to F. exsecta, F. lemani, and F. sanguinea, but they are absent there for some reasons that are not related to the temperature. A similar cold hardiness is characteristic of F. aquilonia in Estonia (Maavara, 1971, 1985), where it represents a side effect of diapause, since excessive cold hardiness has no adaptive significance for insects overwintering in the non-freezing soils of Estonia. Colonization of Siberia by ant species turned out to be possible only due to the existing cold hardiness, i.e. preadaptation to low temperature. On the Sea of Okhotsk coast, cold hardiness of the ants is non-adaptive due to the relatively mild conditions during winter.     

Long-Term Study of a Hantavirus Reservoir Population in an Urban Protected Area,Argentina

Green spaces in urban areas can play a key role in protecting wildlife. However, the presence of wildlife in urban areas can lead to human health risks. Although the presence of the rodent species Oligoryzomys flavescens (hantavirus reservoir) has been recorded in cities of Argentina, its population dynamics in this type of habitat is still unknown. Here, we evaluated: (1) long-term spatial and temporal patterns of O. flavescens abundance and how these patterns were influenced by weather factors and (2) the seroprevalence of hantavirus and the identity of the viral lineage circulating in the population that inhabits the Costanera Sur Ecological Reserve, a protected area in the city of Buenos Aires. Genetic results confirmed that the pathogenic ANDES Central Lechiguanas virus is present in O. flavescens populations inhabiting this urban reserve. Abundance of O. flavescens showed interannual and seasonal fluctuations, with maximum values in winter and spring and minimum ones in summer and autumn. Summers with the highest abundances of O. flavescens were preceded by warmer winters, while winters with lower abundances were preceded by warmer summers. On the other hand, accumulated precipitations in the previous 6 months positively affected winter abundance. These results could help the authorities in charge of the green spaces of Buenos Aires to identify priority areas and times of the year for the implementation of preventive measures that minimize the contact of rodents with visitors. Such measures could be intensified when winters are warmer than normal, and summers are cooler and wetter than normal.     

Review of the genus <Emphasis Type="Italic">Banjos</Emphasis> (Perciformes: Banjosidae) with descriptions of two new species and a new subspecies

A taxonomic review of the genus Banjos (Perciformes: Banjosidae), previously restricted to a single species, Banjos banjos (Richardson 1846), recorded from the northwestern Pacific Ocean from the South China Sea north to Japan, as well as Lombok (Indonesia), New Caledonia and Australia, resulted in the recognition of three species, including B. banjos (northwestern Pacific Ocean, Indonesia and western Australia), Banjos aculeatus sp. nov. (eastern Australia) and Banjos peregrinus sp. nov. [northern Australia (Timor Sea)]. Records of B. banjos from New Caledonia probably also represent B. aculeatus, which is clearly distinct from other congeners in having a relatively long, strongly serrated spine at the posteroventral angle of the preopercle and an entirely dusky membrane on the spinous dorsal fin in juveniles < ca. 70 mm SL, in addition to slightly longer first and second dorsal-fin spines. Banjos peregrinus is characterized by a relatively greater head length, orbit diameter, postorbital length and pre-pelvic-fin length, as well as poorly developed serration of the exposed margin of the cleithrum. Within B. banjos, a population from the southeastern Indian Ocean, including Indonesia and western Australia, is regarded as a distinct subspecies (Banjos banjos brevispinis ssp. nov.), distinguishable from B. b. banjos from the northwestern Pacific Ocean by a relatively narrow least interorbital width, and shorter second and eighth dorsal-fin spines. Ontogenetic morphological changes within the genus and the status of the holotype of Anoplus banjos Richardson 1846 are discussed in detail.     

Summer-autumn ichthyoplankton of the Sea of Okhotsk and the Sea of Japan and special traits of feeding of fish larvae and fry in 2003–2004

In summer-autumn of 2003–2004, the ichthyoplankton of the Sea of Okhotsk comprised 35 species. In this period the most widely distributed and numerous were larvae of the lord Hemilepidotus gilberti, the Pacific stout sand lance Ammodytes hexapterus, and the Sakhalin dab Limanda sakhalinensis. The maximum catches of fish larvae were attributed to coastal waters off eastern Sakhalin and to the shelf of the northern part of the Sea of Okhotsk. In November of 2003, the ichthyoplankton of the Sea of Japan was represented by fish larvae belonging mainly to the boreal ichthyocomplex. The catches consisted predominantly of larvae of the arabesque greenling Pleurogrammus azonus, the ronquil Bathymaster derjugini, and the rockfish Sebastes owstoni. Fish larvae and fry in the northwestern part of the Sea of Japan were caught principally within 43°–45° N and 137°–139° E above the depth 1500–2000 m. The food spectrum of fish larvae in the Sea of Okhotsk and the Sea of Japan comprised over 20 plankters of various size belonging to seven taxa. Irrespective of fish species, the food items common of all fish were copepods Pseudocalanus minutus and Oithona similis. The daily rations were calculated for mass species (Hemilepidotus gilberti, Ammodytes hexapterus, Hexagrammos stelleri, Pleurogrammus azonus, Bathymaster derjugini, and Sebastes owstoni). The larvae of all considered species in the Sea of Japan and in the Sea of Okhotsk fed predominantly in the light period of the day.     

Succession processes in the anoxygenic phototrophic bacterial community in Lake Kislo-Sladkoe (Kandalaksha Bay,White Sea)

The community of anoxygenic phototrophic bacteria (APB) in the water column of Lake Kislo- Sladkoe (Kandalaksha Bay, White Sea), which has recently become separated from the sea, was investigated in March?April 2012, March?April 2013, and in September 2013. The lake, which was previously considered meromictic, was in fact mixed and was strongly affected by the sea. In winter the lake is sometimes washed off with seawater, and this together with the seasonal cycles of succession processes determines the succession of the community. The consequences of the mixing in autumn 2011 could be observed in the APB community as late as autumn 2013. Green-colored green sulfur bacteria (GSB) usually predominated in the chemocline. In winter 2013 stagnation resulted in turbidity of water under the ice, which was responsible for both predominance of the brown GSB forms and the changes ratio of the species of purple sulfur bacteria (PSB) in anoxic water layers. Production of anoxygenic photosynthesis in the lake was at least 240 mg C m^-2 day^-1 in September and 0–20 mg C m^–2 day^–1 in March—April, which corresponded to 40 and 69%, respectively, of oxygenic photosynthesis. Okenone-containing purple sulfur bacteria, strain TcakPS12, were isolated in 2012 from lake water. The ells of this strain form filaments of not separated cells. Strain TcakPS12 exhibited 98% similarity with the type strains of Thiocapsa pendens DSM 236 and Thiocapsa bogorovii BBS, as well as with the strains AmPS10 and TcyrPS10, which were isolated from Lake Kislo-Sladkoe in 2010.     

Genetic diversity of free-living <Emphasis Type="Italic">Symbiodinium</Emphasis> in the Caribbean: the importance of habitats and seasons

Although reef corals are dependent of the dinoflagellate Symbiodinium, the large majority of corals spawn gametes that do not contain their vital symbiont. This suggests the existence of a pool of Symbiodinium in the environment, of which surprisingly little is known. Reefs around Curaçao (Caribbean) were sampled for free-living Symbiodinium at three time periods (summer 2009, summer 2010, and winter 2010) to characterize different habitats (water column, coral rubble, sediment, the macroalgae Halimeda spp., Dictyota spp., and Lobophora variegata, and the seagrass Thalassia testudinum) that could serve as environmental sources of symbionts for corals. We detected the common clades of Symbiodinium that engage in symbiosis with Caribbean coral hosts A, B, and C using Symbiodinium-specific primers of the hypervariable region of the chloroplast 23S ribosomal DNA gene. We also discovered clade G and, for the first time in the Caribbean, the presence of free-living Symbiodinium clades F and H. Additionally, this study expands the habitat range of free-living Symbiodinium as environmental Symbiodinium was detected in T. testudinum seagrass beds. The patterns of association between free-living Symbiodinium types and habitats were shown to be complex. An interesting, strong association was seen between some clade A sequence types and sediment, suggesting that sediment could be a niche where clade A radiated from a free-living ancestor. Other interesting relationships were seen between sequence types of Symbiodinium clade C with Halimeda spp. and clades B and F with T. testudinium. These relationships highlight the importance of some macroalgae and seagrasses in hosting free-living Symbiodinium. Finally, studies spanning beyond a 1-yr cycle are needed to further expand on our results in order to better understand the variation of Symbiodinium in the environment through time. All together, results presented here showed that the great diversity of free-living Symbiodinium has a dynamic distribution across habitats and time.     

The Seasonal Dynamics of the Abundance and Species Composition of Nekton in the Upper Epipelagic Layer of the Western Bering Sea

The western Bering Sea is an important region that is used by many nekton species for feeding. From the seasonal aspect, these waters are characterized by pronounced dynamics of the abundance and structure of the nekton community. The pattern of seasonal variations in the total biomass, composition, and structure of nekton in the upper epipelagic layer (0–50 m) of this region are considered based on the data of the complex studies conducted by the Pacific Research Fisheries Center (TINRO Center) in the deep-sea basins of the western Bering Sea and the Navarin area in June–October, 2003–2015. During June–October, the total nekton biomass changed by more than an order of magnitude: from 100 kg/km² in early June it increased to a maximum of 2700 kg/km² in the middle of August and then declined significantly, to 200 kg/km², in late October. The major contribution to the nekton biomass was made by Pacific salmon (Oncorhynchus spp.), mainly O. keta, as well as by the boreopacific gonate squid (Boreoteuthis borealis) and the shortarm gonate squid (Gonatus kamtschaticus). As well, walleye pollock (Theragra chalcogramma), Pacific herring (Clupea pallasii), and capelin (Mallotus villosus) were abundant in waters near the shelf. The dynamics of the species structure can be divided into three periods: (1) early summer, from June to the second 10 days of July, when pre-anadromous pink (O. gorbuscha) and chum salmon predominate and the species diversity is at a medium level (the polydominance index is 3.5–4.0); (2) summer, from the third 10 days of July to the second 10 days of September, when chum salmon becomes dominant (more than 70% of the biomass) and the species diversity is at a minimum (1.5–2.0); and (3) autumn, from the third 10 days of September to October, when common species such as chum salmon, sockeye salmon, and boreopacific gonate squid have relatively equal proportions, the proportion of pink salmon underyearlings is also high, and the species diversity is at a maximum (4.5). The pattern of the spatial distribution in the early summer period is characterized by active formation of the nekton community due to the large-scale migrations from the central and eastern Bering Sea and from the Pacific Ocean. In the summer period, the concentration of the nekton in the western Bering Sea, particularly in the Aleutian Basin, reaches the maximum level and the migratory activity decreases. Reverse migration processes are observed in the autumn period: a major portion of the nekton biomass redistributes to the southeastern Commander Basin for further movement to the ocean and the central Bering Sea.