Photosynthetic carbon dioxide assimilation by Rhodospirillum rubrum

Summary Although Rhodospirillum rubrum, grown photoheterotrophically on malate, assimilates carbon dioxide less rapidly than it does when grown autotrophically, the difference is less marked than previously suggested.The rate of photoassimilation of carbon dioxide varies during batch culture on malate, reaching a maximum at about mid-exponential phase. It also varies with density and growth rate in a turbidostat continuous-flow culture on malate and increases with decreasing growth rate in a chemostat continuous-flow culture growing with limiting malate concentrations.The changing rates of carbon dioxide photoassimilation during photoheterotrophic growth under the various conditions are paralleled by changing activities of ribulose diphosphate carboxylase.Under conditions of maximum carbon dioxide fixation the rate by photoheterotrophic cultures approaches that shown by the bacterium growing autotrophically and is assimilated eight to ten times more slowly than is malate in chemostat cultures.The rate of carbon dioxide fixation also increases to that shown by autotrophic cells when photoheterotrophic cultures are deprived of malate, but without subjecting them to the conditions required for autotrophic growth.     

Studies of intermediary metabolism in germinating pea cotyledons. The pathway of ethanol metabolism and the role of the tricarboxylic acid cycle

1. The pathway of ethanol metabolism in cotyledons of 3-day-old pea seedlings has been examined by incubating tissue slices with [1-(14)C]ethanol and [2-(14)C]ethanol for periods up to 1hr. 2. Ethanol was rapidly incorporated into citrate and glutamate but relatively small amounts of (14)C were present in the evolved carbon dioxide even after 1hr. of ethanol metabolism. 3. Similar data were obtained from experiments in which [1,2-(14)C(2)]acetaldehyde and [(14)C]acetate were supplied. 4. The results are interpreted as indicating that ethanol is metabolized essentially via the reactions of the tricarboxylic acid cycle with a substantial drain of alpha-oxoglutarate to support the biosynthesis of glutamate. 5. It is concluded that oxaloacetate, required for the incorporation of ethanol into citrate, arises mainly from the transamination of aspartate and the fixation of carbon dioxide.     

Carbon Dioxide Production in Early Anaerobiosis

1. Slices of swede tissue placed under nitrogen produce carbondioxide and ethanol in equal amounts after an initial phaselasting about 1.5 hours. During this initial phase some 2 µM./g.fr. wt. of extra carbon dioxide is produced. The productionof such extra carbon dioxide is not affected by iodoacetate,fluoride, or arsenite which inhibit glycolysis or by dinitrophenolwhich stimulates glycolysis. Slices incubated in air in thepresence of cyanide also produce extra carbon dioxide. 2. A second extra burst of carbon dioxide can be induced aftersome hours of anaerobiosis by treating slices with methyleneblue, DPN, or TPN, or as a result of a short air experience. 3. Experiments with labelled sugars support the view that theextra carbon dioxide originates ultimately from carbohydrate,being released, it is proposed, in the oxidative decarboxylationof either pyruvate or 6-phosphogluconate. Carbon dioxide productionthen continues so long as oxidants are available in the cell,finally coming to a standstill when cell components reach theirreduced states.     

Dark CO(2) Fixation and its Role in the Growth of Plant Tissue

Experiments were designed to determine the significance of dark CO₂ fixation in excised maize roots, carrot slices and excised tomato roots grown in tissue culture. Bicarbonate-¹⁴C was used to determine the pathway and amounts of CO₂ fixation, while leucine-¹⁴C was used to estimate protein synthesis in tissues aerated with various levels of CO₂.

Organic acids were labeled from bicarbonate-¹⁴C, with malate being the major labeled acid. Only glutamate and aspartate were labeled in the amino acid fraction and these 2 amino acids comprised over 90% of the ¹⁴C label in the ethanol-water insoluble residue.

Studies with leucine-¹⁴C as an indicator of protein synthesis in carrot slices and tomato roots showed that those tissues aerated with air incorporated 33% more leucine-¹⁴C into protein than those aerated with CO₂-free air. Growth of excised tomato roots aerated with air was 50% more than growth of tissue aerated with CO₂-free air. These studies are consistent with the suggestion that dark fixation of CO₂ is involved in the growth of plant tissues.

     

Towards a more plant physiological perspective on soil ecology

Soil respiration almost balances carbon fixation by terrestrial photosynthesis and exceeds all anthropogenic carbon emissions by an order of magnitude, yet we lack precise knowledge of the sources of, and controls upon, the release of carbon dioxide from soils. Here, we discuss the increasing evidence that half of this carbon release is from living plant roots, their mycorrhizal fungi and other root-associated microbes, and that this release is driven directly by recent photosynthesis. The new studies challenge the widespread view that soil activity is dominated by decomposer organisms using older detrital material and that root litter inputs equal those of aboveground litter. The new observations emphasize the physiological continuity and dynamic interdependence of the plant-microbe-soil system and highlight the need for closer cooperation between plant and soil scientists.     

Theoretical evaluation of necessity of carbon dioxide assimilation by microorganisms during growth on various substrates

The biological role of exogenous carbon dioxide during substrate assimilation with a various degree of reductivity is evaluated. The investigation of metabolic pathways of carbon dioxide incorporation into the metabolic processes of methaneoxidizing bacteria shows that the HCO3- ion assimilation is catalyzed by phosphoenolpyruvate carboxylase and in certain strains also by the key enzyme of autotrophic pathway of the carbon dioxide assimilation, ribulose-1,5-diphosphate carboxylase. The theoretical calculations and experimental studies indicate that exogenous carbon dioxide is a necessary participant of the metabolic processes of methane or methanol assimilation. It is also an acceptor of the excess electrons of these compounds. It is the degree of reductivity of the substrate metabolized that determines the activity of the exogenous carbon dioxide fixation by microorganisms. The carbon dioxide fixation by heterotrophic microorganisms must be considered, therefore, as a process which is mostly due to the elementary composition of the source of carbon under conversion.     

Ketogenesis from butyrate and acetate by the caecum and the colon of rabbits

1. When studied in vitro, tissue from the caecum and the proximal colon of rabbits converted butyrate into ketone bodies. The conversion was similar to that observed with liver slices. The ketogenic activity was associated with the mucosa rather than the muscle of the gut wall and, in the colon, diminished as the distance from the caecal-colonic junction increased. 2. Tissue from the wall of the ileum, caecum, proximal colon and distal colon was also shown to metabolize [1-(14)C]butyrate to carbon dioxide. 3. Enzyme assays showed that in both liver tissue and caecal mucosa the activity of hydroxymethylglutaryl-CoA synthase was more than ten times that of acetoacetyl-CoA deacylase. Labelling experiments in vitro gave confirmation of the hydroxymethylglutaryl-CoA pathway. 4. The significance of the conversion of butyrate into ketone bodies is discussed.     

A Modified Method for Synthesis of Pyridoxylhistamine

This experiment made clear the effect of the small intestinal fistulae fixation on the excretion pattern of hard feces and soft feces, apparent digestibility of crude fiber, and the recovery rate of manganese dioxide in the experimental pellet diet. The filter stick method for crude fiber determination and the wet-ashing method for manganese were approved to be useful. Radioactivity measurements of both duodenum and ileum digesta, collected after the oral administration of radioactive manganese dioxide prepared by the neutron irradiation method, resulted in a considerably rapid passage rate of manganese dioxide through the small intestinal tract.     

The effect of nutrient deficiencies on phosynthesis and respiration in spinach

Summary Spinach plants were grown in nutrient-culture solutions containing reduced levels of all the macro- and micro-nutrient elements except cobalt and chlorine. The rates of photosynthesis (carbon dioxide fixation in the light expressed on a per unit chlorophyll or per unit fresh-weight basis) and respiration (carbon dioxide evolution in the dark expressed on a per unit nitrogen or per unit fresh-weight basis) for whole plants were measured using infra-red gas analysis techniques. Measurements were made when the plants displayed clear symptoms of deficiency relative to control plants. All nutrient deficiencies except iron and molybdenum depressed photosynthesis when chlorophyll was the basis of calculation; manganese-, copper-, phosphorus- and potassium-deficient plants showed the greatest depression. Alternatively when photosynthesis was calculated on a fresh weight basis calcium was the only deficiency which had no affect. Similarly when respiration was calculated on a nitrogen basis all deficiencies except iron, molybdenum and nitrogen result in depressed rates but when respiration was expressed on a fresh-weight basis potassium deficiency resulted in enhanced respiration rates and nitrogen, phosphorus, sulphur, manganese, zinc and molybdenum deficiencies resulted in reduced respiration rates.     

The Kinetics of Isocitrate Lyase Formation in Chlorella: Evidence for the Promotion of Enzyme Synthesis by Photophosphorylation

The addition of acetate to aerobic Chlorella pyrenoidosa indarkness was followed by the formations of isocitrate lyaseactiity. After a lag period of 40 minutes the formation proceededat a constant rate. By use of actylamide gel electrophoresisit was shown that the increase in enzyme activity was accompaniedby the formation of a new protein which, after separation byelectrophoresis, contained isocitrate lyase activity. The formationof isocitrate lyase was repressed by glucose; it was repressedby light in the presence of carbon dioxide, but not when DCMUwas added. In light, plus DCMU, isocitrate lyase was formedanaerobically and the capacity for photo-formation of isocitratelyase was saturated at 500 ergs/cm²/sec. In this respect theprocess resembled the photo-conversion of glucose to polysaccharidebut differed from the photo-assimilation of carbon dioxide whichbecame saturated at a heigher light intensity. Monochromaticlight of 706 mµ wavelength supported both isocitrate layseformation and the conversion of glucose to polysaccharide butnot carbon dioxide fixation. It is concluded that ATP generatedby cyclic photophosphorylatin can provide the energy for isocitratelyase synthesis in Chlorella.     

A Study of the Growth and Photoperceptivity of Etiolated Oat Seedlings

The photoperceptivity of intact oat seedlings has been observedafter pretreating them for 3 days in darkness with a numberof substances—copper and manganese ions, EDTA, copper-glycine,glycine, nitrates, indoleacetic acid, ethanol, and carbon dioxide. None enhanced photosensitivity; carbon dioxide and ethanol reducedit. Copper-glycine in darkness promoted mesocoty1 growth and inducedroot formation. The effects of carbon dioxide and ethanol are shown to be identicaland to account for this a speculative proposal is made aboutmaturation. An alternative explanation of the growth of the mesocotyl thenarises. The relationship between maturation and the behaviour of theseedling upon illumination is discussed.     

裂褶菌F17固态发酵产锰过氧化物酶及其发酵动力学模型的建立

白腐真菌分泌的锰过氧化物酶是木质素降解酶系统的主要组分,对木质素解聚,纸浆和染料的脱色均有重要作用.利用裂褶菌F17在自行设计的通气托盘式反应器中,以松木屑、稻草及黄豆粉为混合营养基质进行固态发酵生产锰过氧化物酶.在自制通气托盘式反应器中,裂褶菌F17能够产生锰过氧化物酶,发酵96 h时,最高酶活力达到13.51 U/...     

Manganese in relation to photosynthesis

Summary It has been proved that manganese deficiency results in a reduced carbon dioxide assimilation. Different symptoms of manganese deficiency of oats could be traced back to shortage of assimilates in the leaves. This is particularly true for reduced growth, the bending over with a kink of the leaves, the necrotic leaf spots, the withering of the diseased leaves with phenolred, the accumulation of nitrates in the leaves and the reduced resistance of the roots towards bacterial infection.Investigations on the influence of manganese on photosynthetic processes were carried out by the author just before and during the beginning of the war. Owing to changing circumstances this work could not be continued and consequently remained fragmentary in some aspects. Those results, which still seem to be of sufficient importance will be published in a series of papers, of which this is the first.     

Current views on the regulation of autotrophic carbon dioxide fixation via the Calvin cycle in bacteria

The Calvin cycle of carbon dioxide fixation constitutes a biosynthetic pathway for the generation of (multi-carbon) intermediates of central metabolism from the one-carbon compound carbon dioxide. The product of this cycle can be used as a precursor for the synthesis of all components of cell material. Autotrophic carbon dioxide fixation is energetically expensive and it is therefore not surprising that in the various groups of autotrophic bacteria the operation of the cycle is under strict metabolic control. Synthesis of phosphoribulokinase and ribulose-1,5-bisphosphate carboxylase, the two enzymes specifically involved in the Calvin cycle, is regulated via end-product repression. In this control phosphoenolpyruvate most likely has an alarmone function. Studies of the enzymes isolated from various sources have indicated that phosphoribulokinase is the target enzyme for the control of the rate of carbon dioxide fixation via the Calvin cycle through modulation of existing enzyme activity. In general, this enzyme is strongly activated by NADH, whereas AMP and phosphoenol-pyruvate are effective inhibitors. Recent studies of phosphoribulokinase inAlcaligenes eutrophus suggest that this enzyme may also be regulated via covalent modification.     

Characterization of a Photosynthetic Mutant Strain of Chlamydomonas reinhardi Deficient in Phosphoribulokinase Activity

A mutant strain of the unicellular green alga, Chlamydomonas reinhardi, is unable to fix carbon dioxide by photosynthesis because it is deficient in phosphoribulokinase activity. The absence of light-dependent carbon dioxide fixation in cells of the mutant strain supports the operation of the Calvin-Benson scheme of photosynthetic carbon dioxide fixation in this organism. No deficiency other than low phosphoribulokinase activity was found which would account for the inability of cells of the mutant strain to fix carbon dioxide by photosynthesis. Activities comparable to those in the wild-type strain were found for eight other enzymes of the Calvin cycle and two enzymes associated with the C₄ dicarboxylic acid pathway. The normal rates of nicotinamide adenine dinucleotide phosphate photoreduction and of photosynthetic phosphorylation observed in chloroplast fragments prepared from cells of the mutant strain indicated that the photosynthetic electron transport chain in the mutant is intact.     

Resource Optimization and Symbiotic Nitrogen Fixation

In temperate forests, symbiotic nitrogen (N) fixation is restricted to the early phases of succession despite the persistence of N limitation on production late in succession. This paradox has yet to be explained adequately. We hypothesized that the restriction of N fixation to early stages of succession results from the optimization of resource allocation in the vegetation. Because of this optimization, N fixation should be restricted to periods when fixation is less costly than N uptake. Our analysis differs from others in the way we calculate the cost of N uptake; we assess the cost of N uptake as the amount of carbon (C) that could be assimilated if the resources necessary to acquire one gram of N from the soil were allocated instead to photosynthesis. We then simulate N fixation as an asymptotic function of the difference in cost between N uptake and N fixation and proportional to the abundance of host tissues for the N-fixing symbionts. The factors that contribute to conditions that favor N fixation are (a) elevated-carbon dioxide (CO₂) concentrations, (b) an open canopy, (c) low available N in the soil, and (d) a soil volume already well exploited by roots. Our results indicate that changes in the relative cost of uptake vs fixation can explain most of the pattern in fixation through both primary and secondary succession, but that competitive interactions with nonfixing species play a role in the final exclusion of fixation in later stages of succession. Received 26 September 2000; accepted 31 January 2001.     

Effect of iron and manganese on65Zn absorption and translocation in soybean seedlings

Summary Short-term experiments were conducted to determine the effect of varying levels of iron and manganese on⁶⁵Zn absorption by roots and translocation to shoots in soybean seedlings. In 11 hours uptake duration, both iron and manganese depressed the⁶⁵Zn absorption by roots and translocation to shoots. The depression was of higher magnitude at higher levels of iron and manganese (5.0 ppm) in the medium coupled with highest level (5.0 ppm) of zinc concentration. It is concluded that interactions between zinc and iron as well as zinc and manganese occur during absorption and translocation processes.Publication No.1185 under Journal Series of the G.B. Pant University of Agriculture and Technology, Experiment Station, Pantnagar     

A Method of Fixing Rat Testis for Light and Electron Microscopy

To overcome the difficulty of obtaining compact slices or pieces of tissue from the rat testis, due to the scarcity of interstitial tissue, the fixation of the testis is started in the live anesthetized animal by injecting 3% glutaraldehyde in 0.1 M cacodylate buffer at pH 7.2 under the albuginea; within a few minutes this causes sufficient hardening of the testis tissue to enable one to cut neat slices from it with a razor blade. Fixation is completed with the usual immersion method. The fixed tissue may then be processed for either light or electron microscopy. Preservation of structural detail is comparable to that obtained with perfusion-fixation. The main advantages of the method are speed and simplicity, which may be very important when dealing simultaneously with several animals.     

Transport of copper and manganese to the xylem exudate of sunflower

Abstract Absorption of copper and manganese by sunflower roots from solution cultures of varying composition was followed by measuring the concentrations of the metals appearing in whole roots, root cell sap and xylem exudate. Total copper in the fibrous roots was linearly related to the concentration of copper in the external solution but the concentration of copper released to the xylem exudate was buffered somewhat against the changes made externally. No such buffering was observed for managenese. A copper-sensitive electrode, responsive only to free cupric ions was used in conjunction with total copper analysis by atomic absorption spectrophotometry to show that little of the copper (usually < 1%) existed as a free ion in any phase of the system. Copper in the xylem exudate may be strongly complexed. An electron paramagnetic resonance spectrum of the xylem exudate indicated that manganese probably was a free divalent ion. Calculation of the electrochemical potential gradient for free cupric ions showed that no special metabolically-linked mechanism need be postulated to account for absorption of copper (or manganese) other than that necessary to maintain the transmembrane potential.     

Effect of helium on the respiration and glycolysis of mouse liver slices

It has been shown that helium has the ability to affect variously the rates of certain metabolic reactions in vitro as compared to nitrogen. An attempt has been made to approximate the sites of action in mouse liver preparations. The following results have been obtained by the substitution of a mixture of 80 per cent helium and 20 per cent oxygen for air: (a) An increase in the rate of oxygen consumption and carbon dioxide production to the same degree, the respiratory quotient remaining unchanged. (b) A decrease in the magnitude of cyanide inhibition. The effectiveness of helium increases with the degree of the cyanide inhibition. (c) No effect on the activity of slices which have been poisoned with fluoride when either lactate or pyruvate has been added as a substrate. (d) A change in the rate, and the slope of the curve of oxygen consumption in liver homogenates which are utilizing pyruvate as a substrate. The use of helium relative to nitrogen under anaerobic conditions causes: (a) A depression of the glycolytic rates in both mouse liver slices and diaphragm. (b) An increase in the carbon dioxide evolution and lactic acid production of mouse liver homogenates oxidizing either glucose and hexose diphosphate, or hexose diphosphate alone. In neither slices nor homogenates does the addition of fluoride and the use of pyruvate as the hydrogen acceptor alter the fundamental response of the preparations. The following hypotheses have been advanced and discussed in order to explain the observed phenomena: 1. Helium does not alter the substrate utilized by the tissue. 2. The gas interferes in some way with the cyanide-cytochrome oxidase bond, but may not affect cytochrome oxidase in the absence of cyanide. 3. The citric acid cycle is not subject to the influence of helium in tissue slices, but is altered in an unexplained fashion in homogenates. It is postulated that a rearrangement of particulate surfaces may be the significant factor here. 4. The glycolytic cycle is the site of both an inhibitory and an acceleratory effect of helium. The locus of the inhibition lies above the aldolase reaction and that of the acceleration between the aldolase and enolase reactions.