Chromosomal evolution of the brown mice,genus Scotinomys (Rodentia: Cricetidae)

Early taxonomic investigations associated the genus Scotinomys with South American akodontine rodents, but more recent morphological analyses based in large part on the glans penis have linked brown mice with North American peromyscines, specifically the genus Baiomys. Differentially stained chromosomal preparations of S. xerampelinus were compared with other cricetine taxa. Chromosomally, golden mice (Ochrotomys) were found to be most similar to Scotinomys, this association based on two apparent synapomorphic G-banded chromosomes. The majority of banded chromosomes possessed by Scotinomys were found to be either uniquely derived or to appear unaltered, and therefore presumably ancestral, when compared to the G-band patterns of other cricetids. These results fail to support the morphological hypotheses that closely unite Scotinomys with Baiomys, and instead support a hypothesis that treats Scotinomys, Ochrotomys, and perhaps Baiomys as a rather loosely associated assemblage of genera that are phylogenetically intermediate between the relatively complex pene, primarily South American cricetine rodents and the more simple pene North American neotomine-peromyscines.     

Cladistical analysis of primitive G-band sequences for the karyotype of the ancestor of the Cricetidae complex of rodents

Homologous segments identified by G-banding sequences of chromosomes of Peromyscus boylii, Neotoma micropus, Oryzomys capito, (Family Cricetidae) Rattus norvegicus, Melomys burtoni, and Apodemus sylvaticus (Family Muridae) were used to hypothesize a chromosomal condition for the cricetid ancestor. A critical assumption in proposing the primitive G-banding sequences for a given chromosome is that if the outgroup and ingroup taxa have a specific sequence, then the ancestor of the ingroup taxa also had that same sequence. Using this methodology, (chromosome numbers refer to proposed homology to the standardized karyotype for Peromyscus), we propose that: (1) the primitive banding pattern of chromosome 1 was identical to that of Neotoma; (2) the primitive patterns of chromosomes 2, 3, 4, 6, 7, 8, 9, 10, 11, and 12 were primitive banding patterns of 5 and 13 were undetermined; (4) a major portion of the banding patterns of 14 and X were present in the ancestral karyotype. Only the largest 14 autosomes and X were examined because the smaller elements had insufficient G-band definition to ensure reasonable accuracy. The karyotype ancestral to that of Peromyscus, Neotoma, and Oryzomys may be as above and the banding patterns of 5, 13, and 14 were acrocentric and identical to those shown for Peromyscus, Neotoma, and Oryzomys (Fig. 1). In the primitive karyotype, heterochromatin (C-band material) was probably limited to the centromeric regions. If the primitive karyotype is as described above, then it is possible to determine the direction, type, and magnitude of chromosomal evolution evident in the various cricetid lineages. Based on the available data, radiation from the ancestral cytotype is characterized by a nonrandom distribution of types of chromosomal changes. Within many genera, more rearrangements occur in the 14 largest autosomal chromosomes of some congeneric species than distinguish the proposed primitive conditions for the genera Peromyscus, Neotoma, and Oryzomys. It would appear that the extensive morphological radiation from the primitive cricetid ancestor as indicated by the presence of over 100 surviving genera within the family, was not accompanied by extensive karyotypic changes. The magnitude of chromosomal variation that accompanies speciation in these genera appears to range from no detectable chromosomal evolution to a radical reorganization of the genome.     

Chromosome analysis of five Brazilian species of poison frogs (Anura: Dendrobatidae)

Dendrobatid frogs have undergone an extensive systematic reorganization based on recent molecular findings. The present work describes karyotypes of the Brazilian species Adelphobates castaneoticus, A. quinquevittatus, Ameerega picta, A. galactonotus and Dendrobates tinctorius which were compared to each other and with previously described related species. All karyotypes consisted of 2n = 18 chromosomes, except for A. picta which had 2n = 24. The karyotypes of the Adelphobates and D. tinctorius species were highly similar to each other and to the other 2n = 18 previously studied species, revealing conserved karyotypic characteristics in both genera. In recent phylogenetic studies, all Adelphobates species were grouped in a clade separated from the Dendrobates species. Thus, we hypothesized that their common karyotypic traits may have a distinct origin by chromosome rearrangements and mutations. In A. picta, with 2n = 24, chromosome features of pairs from 1 to 8 are shared with other previously karyotyped species within this genus. Hence, the A. picta data reinforced that the C-banding pattern and the NOR location are species-specific traits in the genus Ameerega. Moreover, the Ameerega monophyletism proposed by previous phylogenetic studies indicates that the karyotypic differences among species in this genus result from a long divergence time.     

CHROMOSOMAL REPATTERNING AND LINKAGE GROUP CONSERVATION IN MOSQUITO KARYOTYPIC EVOLUTION

Chromosome number and morphology in mosquitoes is remarkably uniform: virtually all mosquitoes have a diploid chromosome number of six (2N = 6), and their chromosomes are invariably metacentric or submetacentric. Numerical changes obviously have not been important in mosquito chromosomal evolution, and because of the morphological similarity of their chromosomes, it appears that structural changes have played little or no role in mosquito karyotypic evolution. The goal of the present study was to identify the types and relative numbers of chromosomal changes in mosquito evolution and to extend the comparison where possible to the higher diptera. To do this, we compared the enzyme linkage maps of six species of Aedes to each other and to enzyme maps of seven other mosquito species and to Drosophila melanogaster. Our results indicate that Aedes chromosomes have been modified by inversions, most which were paracentric, and by translocations, most which were Robertsonian. Intrageneric comparison of Aedes enzyme maps also revealed groups of linked enzyme loci whose integrity has been maintained throughout Aedes evolution (conserved linkages/syntenies). Intergeneric comparisons of Aedes enzyme maps with those of species in the genera Culex, Anopheles, and Toxorhynchites disclosed conserved associations of enzyme loci between mosquito genera. These findings lead us to postulate that the ancestral mosquito karyotype consisted of six chromosomal elements which, other than being combined in different ways in various mosquito groups, have remained essentially intact during mosquito evolution. Furthermore, the identification of groups of linked enzyme loci common to mosquitoes and to D. melanogaster indicates that linkage group conservation may characterize the karyotypic evolution of all dipteran insects.     

Differentiated evolutionary pathways in Haemulidae (Perciformes): karyotype stasis versus morphological differentiation

Extensive phenotypic diversity (size, colors and shapes) among species of Haemulidae is practically dissociated from the conservative cytogenetic pattern observed in this family. Detailed analyses indicate that karyotypic stasis is maintained even under the scrutiny of different chromosome investigation methods. Chromosomal banding patterns (endophenotype) of five Atlantic species are presented here: Conodon nobilis, Pomadasys corvinaeformis, Haemulon aurolineatum, H. plumierii and H. steindachneri, obtained by incorporating the base analog 5-BrdU, C-banding and staining with base-specific fluorochromes. Despite a few chromosomal specificities, relative karyotypic conservation was confirmed, corroborating earlier studies on this family. On the other hand, phenotypic patterns (exophenotype), identified by geometric morphometrics contrast visibly with the chromosomal conservation of this group. As such, the evolutionary rates of chromosomes and body morphology demonstrate clear asynchrony. Possible causes of karyotypic stasis in Haemulidae are discussed as well as the sharing of this condition with other Perciformes.     

Karyotype stability and DNA variability in the Acrididae

The Acrididae are frequently quoted as one of the classic examples of karyotypic stability. Within the family, the Cryptosacci, for instance, are characterised by a majority of species having 23 chromosome arms in the male. The members are then related by Robertsonian sequences in which the basic karyotype is believed to consist of 23 acrocentric elements. Thus the 17-chromosome complement of male truxalines is argued to have been derived from the basic type by three successive centric fusions. Such an origin is at variance with the fact that the rod-shaped chromosomes in eight of the nine species utilised in this study turn out in fact to be telocentric. The scheme is also at variance with the finding that significant differences in DNA content exist both between species within the same chromosome group and between member species of the 17 and 23 groups. The concept of karyotypic stability is thus called to question and the relationship of karyotypes within the family must be considerably more complex than has formerly been supposed.     

Genome evolution in pocket gophers (genus Thomomys)

Heterochromatin is a dominant component of the genome in the bottae group of the pocket gopher genus Thomomys, having had a major role in the karyotypic evolution of member species. Heterochromatin characteristics of two subspecies of T. bottae and one of T. umbrinus were examined with fluorochrome dyes identifying presumptive GC- and AT-rich regions. In two karyotypic forms of T. b. fulvus and in T. umbrinus, chromatin that fluoresces brightly with chromomycin A₃ is also C-band positive, although not all heterochromatin fluoresces. However, in T. b. bottae, only euchromatic regions fluoresce brightly with chromomycin. Fluorescence patterns produced with DAPI are the reverse of the chromomycin banding in all karyotypic forms. Heterochromatin in these taxa is thus highly differentiated, exhibiting heterogeneity in staining characteristics, and presumably in underlying DNA sequences, both across the genome within a given chromosomal complement as well as among the different karyotypic races and species of the bottae group of pocket gophers.     

Taxonomic and phylogenetic analysis of Saprolegniaceae (Oomycetes) inferred from LSU rDNA and ITS sequence comparisons

The aim of this study was to improve our knowledge about the taxonomy and phylogeny of the family Saprolegniaceae, a group of water molds including several pathogens of plants, fish and crustacea. ITS and LSU rDNA were sequenced for representatives of forty species corresponding to ten genera (Achlya, Aphanomyces, Brevilegnia, Dictyuchus, Leptolegenia, Plectospira, Pythiopsis, Saprolegnia, Thraustotheca). Phenetic and cladistic analyses were then carried out. The species Brevilegnia bispora does not appear to belong to the family Saprolegniaceae. Plectospira myrianda clusters with Aphanomyces spp. and they constitute an ancestral group. (Thraustotheca clavata is closely related to the eccentric species of the genus Achlya. The genus Achlya appears polyphyletic, corroborating more or less the three known subgroups, defined by their sexual spore type (eccentric, centric and subcentric). The achlyoid type of spore dehiscence, shared by Aphanomyces and Achlya genera, is shown to be an ancestral character. The saprolegnioid, dictyoid and thraustothecoid types of spore dehiscence are derived characters but their relative evolutionary positions are not resolved.     

KARYOTYPIC DATA ON NORTH AND CENTRAL AMERICAN ZAMIACEAE (CYCADALES) AND THEIR PHYLOGENETIC IMPLICATIONS

Chromosome numbers and karyotypes of species from four American Zamiaceae (Cycadales) are reported. Zamia shows interspecific and intraspecific chromosome variation, whereas Microcycas, Ceratozamia, and Dioon have constant karyotypes within each genus. In Zamia, all karyotypes have the same number of submetacentric and acrocentric chromosomes, but they differ in the number of metacentric and telocentric chromosomes. Centric fission of metacentric chromosomes is proposed to explain the karyotypic variation in this genus. Zamia shows karyological relationships with Microcycas and Ceratozamia, whereas Dioon appears very distinct from the other American cycad genera. Affinity among Zamia, Ceratozamia, and Microcycas karyotypes and distinctiveness of Dioon karyotypes are supported by comparative analysis of phenotypic characters in the four genera.     

Electrophoretic karyotypes of the elm tree pathogen Ophiostoma ulmi (sensu lato)

Pulsed field gel electrophoresis using OFAGE, TAFE, and CHEF systems has been used to more fully characterize karyotypic variation within the two closely related fungal species of Ophiostoma ulmi sensu lato. Twelve wild-type and laboratory strains, representing the less agressive species O. ulmi and both of the biotypes of the more aggressive species O. novo-ulmi were studied and their karyotypes determined. Depending on the strain, a minimum of four to a minimum of eight chromosomal DNA bands were present that fall into three distinct size classes, with one exception. Strain CESSI6K (O. novo-ulmi, North American aggressive subgroup) contains a unique chromosomal DNA band which comigrated near a Saccharomyces cerevisiae chromosome of 0.95 Mb. This unique band was the smallest O. ulmi s. l. chromosomal DNA observed. Seven of the twelve strains shared a common chromosomal DNA banding pattern, whereas each of the other five had a unique karyotype. There was no correlation between chromosome profile and species, as some O. novo-ulmi and O. ulmi strains shared common electrophoretic karyotypes.     

Speciation via hybrid dysgenesis: negative evidence from the Drosophila affinis subgroup

Differences in karyotypic structure are compared with reported isozyme differences in three Mediterranean species of Patella. In addition, the karyotypic structure of Patella is discussed in terms of the karyotypic variability of Archaeogastropoda. Both P. lusitanica and P. caerulea have a haploid complement of n=9 (6 metacentric, 1 submetacentric, 1 subtelocentric, 1 telocentric chromosome in P. lusitanica and 6 metacentric, 1 submetacentric, 2 telocentric chromosome in P. caerulea). P. aspera, although regarded as morphologically more closely related to P. caerulea, has a haploid complement of only n=8 (7 metacentric and 1 submetacentric chromosomes).     

Chromosome evolution in the Gibasis linearis alliance (Commelinaceae)

Two related species of Gibasis, G. venustula (x = 6) and G. speciosa (x = 5) have been shown to be differentiated by a Robertsonian fusion. Meiotic analysis of the F₁ hybrids has revealed further chromosome differentiation of the parent species, involving several interchanges and inversions. These rearrangements tend to be concentrated in the Robertsonian group, and give rise to unusual meiotic configurations. The sets of the two species are nonetheless highly homologous as shown by high chiasma frequency and as much as 65% stainable pollen in the F₁. Models are proposed suggesting the possible evolutionary pathways of this karyotypic differentiation. The results are discussed in terms of chromosome evolution and its consequences for these species.     

No apparent reduction of gene flow in a hybrid zone between the West and North European karyotypic groups of the common shrew, Sorex araneus

The common shrew, Sorex araneus, exhibits an unusually high level of karyotypic variation. Populations with identical or similar karyotypes are defined as chromosome races, which are, in turn, grouped into larger evolutionary units, karyotypic groups. Using six microsatellite markers, we investigated the genetic structure of a hybrid zone between the Sidensjö and Abisko chromosome races, representatives of two distinct karyotypic groups believed to have been separated during the last glacial maximum, the West European karyotypic group (western group) and the North European karyotypic group (northern group), respectively. Significant F_ST values among populations suggest some weak genetic structure. All hierarchical levels show similar levels of genetic differentiation, equivalent to levels of genetic structure in several intraracial studies of common shrew populations from central Europe. Notably, genetic differentiation was of the same order of magnitude between and within karyotypic groups. Although the genetic differentiation was weak, the correlation between genetic and geographical distance was positive and significant, suggesting that the genetic variation observed between populations is a function of geographical distance rather than racial origin. Hence, considerable chromosomal differences do not seem to prevent extensive gene flow.     

IS1237, a Repetitive Chromosomal Element from Clavibacter xyli subsp. cynodontis, Is Related to Insertion Sequences from Gram-Negative and Gram-Positive Bacteria

We describe here a repetitive chromosomal element, which appears to be an insertion sequence, isolated from Clavibacter xyli subsp. cynodontis, a gram-positive plant-associated bacterium. The element, IS1237, is 905 bp in size, is bounded by 19-bp perfect inverted repeats and 3-bp direct repeats, and appears at least 16 times in the genome. It contains three open reading frames which show similarity to open reading frames from various other insertion sequences. We have found that there are two groups of related mobile elements: one in which two open reading frames are read separately and the other in which these two open reading frames are fuse together to give one predicted protein product. Using one of these open reading frames to search amino acid sequence databases, we found two instances in which similar reading frames flank genes carried on plasmids. We believe therefore that these plasmid-borne genes may be parts of previously unidentified mobile elements. For IS1237, a frameshift in two of the open reading frames and a stop codon in the third may indicate that this particular copy of the element is no longer active in transposition. The similarity of IS1237 to other elements from both gram-negative and gram-positive bacteria provides further evidence that mobile elements have been transferred between these two bacterial groups.     

Female reproductive tract of the lesser anteater (Tamandua tetradactyla,myrmecophagidae, Xenarthra). Anatomy and histology

The morphological and histological features of the unusual reproductive tract of the female lesser anteater, Tamandua tetradactyla (Myrmecophagidae, Xenarthra), are described for the first time. The present study aimed to establish the main similarities and differences between this species and other xenarthrans. The populations of this species are declining rapidly for a number of reasons and our study is relevant to diverse programs related to its conservation. Studies were carried out on five female genital tracts of adult specimens. Ovaries were ovoid, presenting a medulla completely surrounded by the cortex, differently from that described in other xenarthans. Like in Dasypus but different from all other armadillos studied, single oocyte follicles were observed and a simple the uterus. The uterovaginal canal connects the uterus with the urogenital sinus. The simple columnar epithelium of the uterovaginal canal ends abruptly at a septum which resembles a hymen, where the transitional epithelium of the urogenital sinus appears. This ancestral feature is shared with that of other armadillos, except Tolypeutes matacus, which has a true vagina. Characteristics of the reproductive tract and sperm morphology of other Xenarthra are comparatively discussed. These observations suggest that important reproductive features are shared between the family Myrmecophagidae and the genus Dasypus, a basal group in the phylogeny of Xenarthra. J. Morphol. 2011. © 2011 Wiley‐Liss, Inc.     

Stable karyotypes: a general rule for the fish of the family Prochilodontidae?

Cytogenetic studies involving the family Prochilodontidae have shown that these fish can be characterized by a constant diploid number and a conserved karyotypic macrostructure. This study focused on comparative physical chromosomal mapping using 18S and 5S rDNA to compare the species Semaprochilodus insignis and S. taeniurus. Our results indicated the conservation of large number of conventional chromosomal markers. The molecular cytogenetic analyses of the location of the 18S rDNA indicated the maintenance of a chromosome pair bearing these sites in both species analyzed, and it appears to be a conserved character among the majority of the species of this family. The stability of the number of 5S ribosomal DNA sites and their chromosomal localization as has been reported for the Prochilodontidae was not, however, confirmed for S. insignis and S. taeniurus, as these species showed multiple specific rDNA 5S sites. As such, and in spite of the fact that a number of studies indicate that the family Prochilodontidae has a conserved karyotypic structure, the utilization of molecular tools that use chromosomal segments as markers revealed that this presumed stability cannot be extended to the genome level for the species S. insignis and S. taeniurus.     

Temporal patterning of courtship behaviour in some parasitic Hymenoptera,with special reference to Melittobia acasta

In many parasitic hymenoptera copulation is preceded by elaborate courtship displays which include species-specific characteristics. Other features, shared by related species, may be used for defining higher taxa. The male's repertoire consists of movements involving the wings, legs, antennae, and mouthparts. These movements are performed continuously, or intermittently, depending on the species involved. The elements of a repertoire are repeated over and over again until the female indicates her readiness to copulate. Temporal patterning of various displays, and the timing of the female response are described. In Melittobia acasta (Walker) (Eulophidae) the male display is composed not only of repeating elements, but also includes new elements, introduced along the way; the display progresses towards a climactic finale. The timing of the female's copulation signal is accurately predictable. The morphology of Melittobia males is discussed in relation to this behaviour. Courtship of a related species, M.chalybii, is compared to the courtship of M.acasta.     

Validating the use of woodrat (Neotoma) middens for documenting natural invasions

Aim Plant macrofossils in fossil woodrat (Neotoma) middens are the primary source of information on late Quaternary biogeographical history of plants in arid and semi‐arid regions of North America. Macrofossil records from middens are playing particularly important roles in documenting spatial and temporal patterns of plant migrations and invasions since the last glacial maximum 21,000 years ago. However, relatively few actualistic studies comparing contents of modern middens with surrounding flora and vegetation have been carried out. The primary aim of this study is to assess the reliability of midden assemblages in detecting the presence of tree, shrub and several other plant species growing on the surrounding landscape. The secondary aims are to determine whether probability of occurrence of species in middens is related to abundance in vegetation, and whether representation of individual species in middens is contingent on presence/absence or abundance of other species. Location Our five study sites were bedrock escarpments or canyons in the central Rocky Mountains (north‐eastern Utah, central Wyoming and south‐central Montana). All sites were in conifer woodland or forest/woodland variously dominated by Juniperus osteosperma, J. scopulorum, Pinus edulis, P. flexilis and Pseudotsuga menziesii. Neotoma cinerea is the only woodrat species in the region. Methods Macrofossil assemblages from 59 modern middens (all showing clear signs of recent or ongoing woodrat activity) were compared with floristic composition of vegetation within 50 m of the middens, and with percent cover of vegetation within 30 m of the middens. Results Coniferous trees and shrubs were well‐represented in middens, occurring consistently even when abundance in the local vegetation was very low. Juniperus osteosperma and J. scopulorum were particularly well‐represented, occurring in middens regardless of local abundance. Other conifers (P. edulis, P. flexilis, P. ponderosa, Pseudotsuga menziesii) were occasionally absent from middens when abundance in vegetation was low (< 20% canopy cover). Occurrence of dicot shrubs and graminoids was less consistent. Main conclusions Middens constructed by N. cinerea are highly reliable sensors of presence/absence of J. osteosperma and J. scopulorum, and hence can be used to infer invasions and past biogeographical distributions of these species. The middens are also reliable in registering populations of other conifers, although presence in middens may be contingent on local abundance. Additional comparative studies are needed to develop a sound empirical basis for using middens of N. cinerea and other species to infer past presence/absence of plant species on the landscape, and to explore the vegetation‐sensing properties of midden assemblages.     

A systematic histological study of palm fruits. VIII. Subtribe Dypsidinae (Arecaceae)

Analysis of the pericarp structure in the four genera of the palm subtribe Dypsidinae reveals tissues similar to those in other taxa within the pseudomonomerous Indo-Pacific arecoid palms, but generally in unspecialized configurations consistent with their presumed basal position within this group. Unique tissues within some members of genus Dypsis include thin-walled, tannin-filled fibers around the vascular bundles. Large-fruited members of the presumably related genera Lemurophoenix, Masoala, and Marojejya show more distinctive arrangements of protective tissues and are quite different from one another. Only Marojejya appears to be closely related to Dypsis. Lemurophoenix and Masoala, by possession of both unsheathed vascular bundles and bundles with heavy fibrous sheaths, show possible affinities with genera well-removed from Dypsis.     

Chromosome studies in the mammalian subfamily Antilopinae

The karyology was studied in nine species of Antilopinae and evaluated with regard to cytotaxonomic relations within the subfamily. Karyotypes of three of these species were previously undescribed. Chromosomes were examined by conventional staining methods, G-, C-, and T-banding techniques, and by autoradiography. Evolutionary differentiation of karyotypes in this group is characterized by extensive Robertsonian fusions and a particular translocation between the X chromosome and an autosome. With comparison of Giemsa-banding patterns a taxonomy has been constructed which differs most markedly from the classical taxonomy in two aspects: the blackbuck, Antilope cervicapra, shows a strong karyotypic affinity to gazelles of the subgenus Nanger; Thomson's gazelle, Gazella thomsoni, lacks the numerous Robertsonian fusions and the X-autosome translocation common to other members of Gazella studied to date. Cases of intraspecific polymorphism of chromosome morphology and number are presented.