一步法PCR检测大鼠肺支原体核酸的研究

一步法体外扩增结合Ｓｏｕｔｈｅｒｎ杂交检测Ｍ５３鼠肺支原体标准株,设计一对特异寡核苷酸引物及探针,合成、纯化、建立了特异、敏感、快速的检测手段。扩增产物经琼脂糖凝胶电泳鉴定,结果显示鼠肺支原体Ｍ５３株基因组ＤＮＡ７１０ｂｐ特异谱带。对５０只ＳＤ大鼠进行检测,结果ＰＣＲ方法检出率高于分离培养法,扩增产物行Ｓｏｕｔｈｅｒｎｂｌｏｔ杂交验证,采用碱性磷酸酶标记寡核苷酸探针,可与膜上特异靶ＤＮＡ序列杂交,而阴性对照无杂交信号。特异性实验检出１０ｐｇ的ＤＮＡ。充分说明一步法ＰＣＲ,具有高度、特异、灵敏、快速等优势,适应与大、小鼠监测中应用。     

PCR技术检测猪肺炎支原体的研究进展

猪肺炎支原体(Mycopiasma hyopneumoniae)是引起猪支原体肺炎的重要病原,该病常引起继发感染和混合感染,严重威胁养猪业发展,造成巨大的经济损失.利用PCR技术对猪支原体肺炎早期正确诊断具有非常重要的意义.从猪肺炎支原体的特异性靶基因、临床样品采集方法与样品DNA处理方法、关键技术因素及普通PCR技术、多重PCR技术、套式PCR技术、荧光定量PCR技术、芯片检测和环介导等温扩增技术等在猪肺炎支原体检测中的研究进展、主要优缺点及应用进行综述.     

鼠肺支原体单克隆抗体的研究

通过杂交瘤技术建立了３株抗鼠肺支原体单克隆抗体细胞株,它们分别是ＢＡ１１,ＢＤ７和Ｂ６１２．试验表明：３株细胞所分泌的抗体均属ＩｇＧ１亚类,都是鼠肺支原体的特异性抗体,与多种其它支原体无交叉反应。     

细胞培养中支原体污染的PCR检测

根据支原体16s rDNA序列,选择RemyTeyssou设计的三条寡核苷酸链,组成两套引物:P_(1-2a)能检测出细胞培养中常见的各种支原体,P_(1-2b)能检出无胆甾原体。反应可检出体系中10CFV的菌体。此法先用于对实验室人为污染支原体Vero细胞的检测,后与DNA 染色法和培养法比较,检测了49份生物样品,其中24份传代细胞,PCR检测的阳性率为58％,DNA染色法为42％,培养法为33％;三者的灵敏性比较,PCR可检出10~(-3)稀释度的阳性样品,高于其他两种方法。此PCR方法快速、灵敏、特异,适用于细胞培养中支原体污染的检测。     

实时荧光定量PCR在猪肺炎支原体检测中的应用

实时荧光定量PCR技术是一种利用荧光检测方法来定量核酸的技术,具有高度的灵敏性、特异性和精确性.综述了荧光定量PCR技术的基本原理及其在猪肺炎支原体检测中的应用.     

盘羊肺炎支原体感染PCR 检测方法的建立与初步应用

羊支原体性肺炎,是由支原体引起的一类高度接触性传染病,又称羊传染性胸膜肺炎(Infections pleuropneumonia of sheep and goats),临床症状主要表现为高热、咳嗽、消瘦、     

鼠棒状杆菌PCR检测方法的建立及其应用

目的建立鼠棒状杆菌PCR检测方法并应用于临床样本检测。方法用脑心浸出液培养基复苏、培养鼠棒状杆菌（corynebacteriumkutscheri,C．kutscheri）并提取基因组DNA作模板;根据GenBank中C．kutsche6的16S基因序列设计合成引物,建立鼠棒状杆菌PCR检测方法并进行敏感性和特异性的评价;人工感染昆明鼠,建立小鼠棒状杆菌感染模型,采集肝脏和肾脏,提取DNA进行检测。结果成功建立了鼠棒状杆菌PCR检测方法,该方法可检测到100个阳性质粒;对小鼠沙门氏菌、肺炎链球菌和巴氏杆菌无交叉反应;全部8个人工感染样本全部检测为阳性。结论建立的鼠棒状杆菌PCR检测方法灵敏度高、特异性好,可作为鼠棒状杆菌感染的快速检测方法。     

应用实时荧光PCR技术检测烟曲霉的初步研究

目的:根据烟曲霉Mtol基因特异位点设计并合成探针及引物,建立应用实时荧光PCR检测烟曲霉的方法.方法:通过对多种病原曲霉Mtol基因序列的比对分析,在烟曲霉特异位点设计引物及探针,并对其进行特异性及敏感性进行验证.结果:通过对曲霉属26株不同曲霉菌及其他属的6株不同病原真菌的特异性验证未发现有交叉反应,敏感性实验显示应用该方法可检出1.08 X 10-6μg/ml的模板DNA.结论:实验建立了应用实时荧光PCR技术检测烟曲霉的方法,该方法具有特异、灵敏、快速等特点并能有效避免普通PCR中的样品间交叉污染问题.     

用PCR检测细胞培养中支原体污染

细胞培养中支原体污染已经成为严重的问题.为了扩增6种支原体(精氨酸支原体,口腔支原体,人型支原体,猪鼻支原体,发酵支原体及莱氏支原体)核糖体RNA操纵子的16s和23s DNA间区,设计了三个通用PCR引物(F1,F2及R1).当以6种支原体DNA为模板时,引物F1和R1产生340到468bp的片段,引物F2和R1产生145到211bp的片段,当用Hela细胞或E.coli DNA作为模板,用引物F1和R1时,在电泳中未观察到特定区带.此法最小能检出8.5fg精氨酸支原体DNA,相当于13个精氨酸支原体.这说明,当这些支原体污染细胞培养时,能用PCR法检测出来.     

支原体检测多重定量PCR方法的建立及应用

目的:建立一种快速、准确的方法检测支原体,这不仅可以有效地减少和预防支原体污染,还能为科研工作者提供一定的指导价值。方法:利用荧光定量PCR(TaqMan探针法)检测支原体,反应体系中同时存在标记两种颜色TaqMan探针及相关引物,分别检测支原体DNA和参考基因模板。根据支原体16S核糖体RNA保守区和参考基因TOP3A保守区设计引物和探针。通过对引物浓度、探针浓度和退火温度等反应条件的优化,建立了TaqMan探针多重定量PCR方法,并对该方法的特异性、敏感性和重复性进行了验证。结果:建立的双色荧光探针定量PCR方法的标准曲线相关系数r2和扩增效率分别为0.995和113.36%;该方法最低检测限为10 copies/μL;组内及组间变异系数均小于1%,证明该检测方法高效。利用该方法对随机挑选90例细胞抽提DNA样本进行检测,结果有60例为支原体阳性样本,阳性率67%,阳性率与相关研究报道一致。检测3个细胞培养上清样本,结果 1例支原体阳性,2例支原体阴性。从检测的样本中随机选择3个阳性样本及2个阴性样本使用普通PCR支原体检测试剂盒检测,结果一致;将其测序,测序结果比对正确。结论:本研究建立的多重定量PCR支原体检测方法能够应用于细胞抽提DNA及细胞培养上清的支原体检测,可以实现高效、快速检测支原体污染。     

A quantitative TaqMan PCR assay for the detection of Mycoplasma suis

Aim: To develop a TaqMan probe‐based, highly sensitive and specific quantitative PCR (qPCR) assay for the detection and quantification of Mycoplasma suis in the blood of pigs. Methods and Results: Primers and probes specific to Myc. suis 16S rRNA gene were designed. The qPCR assay’s specificity, detection limit, intra‐ and inter‐assay variability were evaluated and its performance was compared with a Myc. suis conventional PCR assay (cPCR). Blood of two experimentally infected pigs, 40 Indiana pigs, 40 Brazilian sows and 28 peccaries were tested. The assay detected as few as ten copies of Myc. suis plasmids and was 100‐fold more sensitive than the cPCR. No cross‐reactivity with nontarget pig mycoplasmas was observed. An average of 1·62 × 10¹¹ and 2·75 × 10⁸ target copies ml^?1 of blood were detected in the acutely and chronically infected pigs, respectively. Three (7·5%) pigs and 32 (80·0%) sows were positive while all peccaries were negative for Myc. suis. Conclusion: The developed qPCR assay is highly sensitive and specific for Myc. suis detection and quantification. Significance and Impact of the Study: TaqMan qPCR is an accurate and quick test for detection of Myc. suis infected pigs, which can be used on varied instrumentation platforms.     

鳕鱼成分的实时荧光PCR检测方法

研究建立了鳕鱼成分的实时荧光PCR检测方法。依据鳕鱼的16S rRNA基因序列设计一对PCR引物及探针,对12种鳕鱼样品和71种非鳕鱼动植物样品进行实时荧光PCR检测,结果显示,只有12种鳕鱼样品产生荧光信号,其他非鳕鱼样品均不产生荧光信号,实验表明此方法具有特异性,其检测限为0.01 ng/μl鳕鱼DNA和0.01%鳕鱼肉粉。对市售的鳕鱼样品进行实际样品检测,均能很好地检出鳕鱼成分。此法特异性强,灵敏度高,可作为鳕鱼成分鉴定的检测方法。     

Development of a rotor-gene real-time PCR assay for the detection and quantification of Mycoplasma genitalium

We developed and validated a real-time quantitative polymerase chain reaction (qPCR) assay to determine Mycoplasma genitalium bacterial load in endocervical swabs, based on amplification of the pdhD gene which encodes dihydrolipoamide dehydrogenase, using the Rotor-Gene platform. We first determined the qPCR assay sensitivity, limit of detection, reproducibility and specificity, and then determined the ability of the qPCR assay to quantify M. genitalium in stored endocervical specimens collected from Zimbabwean women participating in clinical research undertaken between 1999 and 2007. The qPCR assay had a detection limit of 300 genome copies/mL and demonstrated low intra- and inter-assay variability. The assay was specific for M. genitalium DNA and did not amplify the DNA from other mycoplasma and ureaplasma species. We quantified M. genitalium in 119 of 1600 endocervical swabs that tested positive for M. genitalium using the commercial Sacace M. genitalium real-time PCR, as well as 156 randomly selected swabs that were negative for M. genitalium by the same assay. The M. genitalium loads ranged between < 300 and 3,240,000 copies/mL. Overall, the qPCR assay demonstrated good range of detection, reproducibility and specificity and can be used for both qualitative and quantitative analyses of M. genitalium in endocervical specimens and potentially other genital specimens.     

A real-time PCR assay for detection and quantification of Mycoplasma agalactiae DNA

AIMS: The aim of this study was to develop a rapid, sensitive, specific tool for detection and quantification of Mycoplasma agalactiae DNA in sheep milk samples. METHODS AND RESULTS: A real-time polymerase chain reaction (PCR) assay targeting the membrane-protein 81 gene of M. agalactiae was developed. The assay specifically detected M. agalactiae DNA without cross-amplification of other mycoplasmas and common pathogens of small ruminants. The method was reproducible and highly sensitive, providing precise quantification of M. agalactiae DNA over a range of nine orders of magnitude. Compared with an established PCR assay, the real-time PCR was one-log more sensitive, detecting as few as 10(1) DNA copies per 10 microl of plasmid template and 6.5x10(0) colour changing units of reference strain Ba/2. CONCLUSIONS: The real-time PCR assay is a reliable method for the detection and quantification of M. agalactiae DNA in sheep milk samples. The assay is more sensitive than gel-based PCR protocols and provides quantification of the M. agalactiae DNA contained in milk samples. The assay is also quicker than traditional culture methods (2-3 h compared with at least 1 week). SIGNIFICANCE AND IMPACT OF THE STUDY: The established real-time PCR assay will help study the patterns of shedding of M. agalactiae in milk, aiding pathogenesis and vaccine efficacy studies.     

兔支气管败血波氏杆菌PCR检测方法的建立及应用

目的建立一种简便、快速、敏感、特异的适用于支气管败血波氏杆菌的PCR检测方法。方法根据兔支气管败血波氏杆菌（Bordetella bronchiseptica）的fim2基因序列设计了一对特异性引物,进行PCR扩增、特异性和敏感性试验,并将其应用于临床样品的检测。结果利用该PCR方法扩增出425bp的目的基因片段,该产物序列与GeneBank上公布的基因序列同源性为100％。特异性试验表明,该方法对大肠埃希氏菌、多杀性巴氏杆菌、魏氏梭菌和金黄色葡萄球菌均无交叉性反应;并且最小可检出菌液浓度为3．6CPU。用该PCR方法检测了从江苏、山东等地采集的146份兔鼻拭子,结果检出支气管败血波氏杆菌阳性92例,阳性率为63．01％。结论建立了快速检测支气管败血波氏杆菌的PCR方法。