The shape of the gel to liquid crystalline phase transition of dielaidoylphosphatidylethanolamine is markedly dependent on the method of sample preparation

Phosphatidylethanolamines are known to exhibit asymmetric phase transitions with a low temperature shoulder. However, in this work we demonstrate that suspensions of dielaidoylphosphatidylethanolamine can be prepared which exhibit very sharp and only slightly asymmetric phase transitions. Such preparations are made either by isolating a rapidly sedimenting fraction of a vortexed suspension of this lipid or by dialyzing a suspension which had been hydrated at pH 9.2 to pH 7.2. Smaller aggregates of the lipid can be isolated from the supernate of a vortexed suspension of dielaidoylphosphatidylethanolamine after removal of the rapidly sedimenting fraction or it can be produced by sonication of a sample at pH 9.2 followed by dialysis to pH 7.2 Such preparations exhibit very broad transitions and the transition temperature is shifted to lower values. These results demonstrate that the shape of the phase transition of dielaidoylphosphatidylethanolamine is particularly sensitive to the method of sample preparation. Furthermore, an asymmetric phase transition with a low temperature shoulder is not necessarily an intrinsic property of phosphatidylethanolamines.     

The multi-mode polarization modulation spectrometer: part 1: simultaneous detection of absorption, turbidity, and optical activity

Circular dichroism (CD) is an important spectroscopic technique for monitoring chirality and biological macromolecule conformation. However, during a CD measurement, absorbance, light scattering/turbidity, and fluorescence can also be detected. The simultaneous measurement of these different spectral features for a single sample is the basis of a multi-mode optical spectrometer. This allows time-efficient gathering of complementary information and provides a scheme to ensure that CD measurements are reliable. Aspects of circular polarization differential light scattering, pH, and temperature variation of a protein (antibody) solution are described. A procedure to help ensure that CD measurements are reliable is described.     

High-resolution study of the helix–coil transition of poly(L-glutamic acid): Spectroscopic data correlation and the discovery of a new transition

This article reports on both (1) the precision and capability of a computerized multidimensional spectrophotometric system recently developed in our laboratory and (2) the high-resolution study of the helix–coil transition of poly(L-glutamic acid)[poly(Glu)], especially with regard to the discovery of an overlooked transition which is attributable to order–disorder rearrangement of the poly(Glu) side chain in the α-helical conformation. This study was made possible by the high performance of the system used. The simultaneous and continuous measurement of the circular dichroism, the absorbance and light-scattering intensity, and the pH titration curve of poly(Glu) in aqueous salt solution was carried out under continuous scanning of pH ranging from 8 to 2. Besides the well-known random coil to α-helix transition that occurs at about pH 5.5, a highly cooperative transition, which is indicated as a small but definite step in several spectral dimensions, is observed for the first time at pH 4.3. The transition is ascribed to an order–disorder conversion of the side chain on the α-helix backbone.     

Temperature transitions of spectrin in solution and in erythrocyte membranes

Temperature transitions of spectrin in solution and in human erythrocyte membranes are recorded in the region t greater than 40 degrees C by irreversible changes in protein fluorescence spectra. Structural changes are completed 20 min after the sample incubation at an increased temperature. Both for isolated spectrin and for erythrocyte ghosts the temperature of half-transition is 46 +/- 1 degree C. There is no transition in the membranes after the removal of spectrin. Transitions in erythrocyte ghosts and in spectrin solution disappear at pH 5 when spectrin is in an aggregated state. Spectrin is suggested to be responsible for the transitions at 50 degrees C; its state in the cells areas more thermostable than in isolated membranes.     

Contractility and conformation

Contractility in fibers can arise from changes of macromolecular conformation caused by changes in some thermodynamic variable such as temperature, pH, or solvent composition. Illustrations are given of contractile processes in fibers and of changes in macromolecular conformation in dilute solution. These may involve order-disorder transitions, e.g. of the type exhibited by the helix-coil transition. A statistical mechanical treatment of the helix-coil transition involves the assignment of statistical weights to various states and the proper counting of these statistical weights in the formation and evaluation of the partition function; the thermodynamic properties of the system are derivable from the partition function. The counting procedure involved in the consideration of the α-helix and random coil is described. In addition, the factors affecting the relative stabilities of various helical conformations are discussed. These considerations of macromolecular conformation provide a basis for discussing contractile mechanisms in which changes of conformation are involved.     

Isothermal lipid phase transitions

In liotropic lipid systems phase transitions can be induced isothermally by changing the solvent concentration or composition; alternatively, lipid composition can be modified by (bio)chemical means. The probability for isothermal phase transitions increases with the decreasing transition entropy; it is proportional to the magnitude of the transition temperature shift caused by transformation-inducing system variation. Manipulations causing large thermodynamic effects, such as lipid (de)hydration, binding of protons or divalent ions and macromolecular adsorption, but also close bilayer approach are, therefore, likely to cause structural lipid change(s) at a constant temperature. Net lipid charges enhance the membrane susceptibility to salt-induced isothermal phase transitions; a large proportion of this effect is due to the bilayer dehydration, however, rather than being a consequence of the decreased Coulombic electrostatic interactions. Membrane propensity for isothermal phase transitions, consequently, always increases with the hydrophilicity of the lipid heads, as well as with the desaturation and shortening of the lipid chains. Upon a phase change at a constant temperature, some of the interfacially bound solutes (e.g. protons or calcium) are released in the solution. Membrane permeability and fusogenicity simultaneously increase. In mixed systems, isothermal phase transitions, moreover, may result in lateral phase separation. All this opens up ways for the involvement of isothermal phase transitions in the regulation of biological processes.     

Novel injectable pH and temperature sensitive block copolymer hydrogel

A novel pH and temperature sensitive block copolymer was prepared by adding pH sensitive moiety to temperature sensitive block copolymer. This block copolymer solution showed a reversible sol-gel transition by a small pH change in the range of pH 7.4-8.0 and also by the temperature change in the region of body temperature. The very precise molecular weight control of block copolymer and the prudential tuning of hydrophilic-hydrophobic balance were needed to control the phase diagram. This block copolymer solution forms a gel at 37 degrees C, pH 7.4 (human body). When the block copolymer solution is at room temperature and pH 8.0 as a sol state, both the temperature and pH change are needed for the gelation. This material can be employed as injectable carriers for hydrophobic drugs and proteins, etc. Gelation inside the needle can be prevented by an increase in the temperature during injection, because it does not change into the gel form with only increasing temperature. This material can be used for even a long guide catheter into the body. The block copolymer hydrogel which shows the sol-gel transition by the small pH change from pH 8.0 to pH 7.4 has merits in the delivery system for protein and cells which show cytotoxicity in acidic (below pH 6.5) or basic (above pH 8.5) conditions. This block copolymer system could be used as a template technology for injectable delivery systems.     

The dynamical transition of proteins,concepts and misconceptions

The dynamics of hydrated proteins and of protein crystals can be studied within a wide temperature range, since the water of hydration does not crystallize at low temperature. Instead it turns into an amorphous glassy state below 200 K. Extending the temperature range facilitates the spectral separation of different molecular processes. The conformational motions of proteins show an abrupt enhancement near 180 K, which has been called a "dynamical transition". In this contribution various aspects of the transition are critically reviewed: the role of the instrumental resolution function in extracting displacements from neutron elastic scattering data and the question of the appropriate dynamic model, discrete transitions between states of different energy versus continuous diffusion inside a harmonic well, are discussed. A decomposition of the transition involving two motional components is performed: rotational transitions of methyl groups and small scale librations of side-chains, induced by water at the protein surface. Both processes create an enhancement of the observed amplitude. The onset occurs, when their time scale becomes compatible with the resolution of the spectrometer. The reorientational rate of hydration water follows a super-Arrhenius temperature dependence, a characteristic feature of a dynamical transition. It occurs only with hydrated proteins, while the torsional motion of methyl groups takes place also in the dehydrated or solvent-vitrified system. Finally, the role of fast hydrogen bond fluctuations contributing to the amplitude enhancement is discussed.     

Effect of the medium on functional and structural properties of serum albumins. IV. The state of human serum albumin in the pH range from 5 to 10

In order to investigate the effects of temperature and ionic strength on the N-B-transition and the alkaline denaturation of the human serum albumin, the pH-dependences of fluorescence position and relative yield of Trp-24 and of protein bound dye ANS were measured. The measurements were carried out at temperatures from 10 to 45 degrees C and ionic strengths (NaCl) from 0.001 to 0.2. The pH-induced structural transitions have different realization in environments of tryptophanyl and tightly bound ANS. The alkaline denaturation does not change the Trp-214 fluorescence. The N-B-transition gives rise to the slight polarity and/or mobility lowering in the Trp-214 environment (the shorter-wave-length spectral shift). Increase in the temperature and ionic strength induces the shift of the transition midpoint from ca. 8 to 8.7 and reduces the spectral shift amplitude. At low ionic strengths, the new structural transition in the Trp-214 environment is observed at pH change from 6.7 to 5.7. This transition is not observable using ANS fluorescence. The N-B-transition is accompanied by an enhancement and longer-wavelength shift of the ANS fluorescence spectra. The transition midpoint is independent of temperature, but is shifted to lower pH values at a decrease of ionic strength value. At ionic strengths less than or equal to 0.01 the shorter-wavelength spectral shift is seen at pH from 7.5 to 9, which seems to reflect the disulfide B-A-isomerisation. The alkaline denaturation gives rise to the sharp quenching of ANS fluorescence, probably due to the ANS binding site decomposition.(ABSTRACT TRUNCATED AT 250 WORDS)     

Aggregation and fluorescence quenching of chlorophyll a of the light-harvesting complex II from spinach in vitro

The salt-induced aggregation of the light-harvesting complex (LHC) II isolated from spinach and its correlation with fluorescence quenching of chlorophyll a is reported. Two transitions with distinctly different properties were observed. One transition related to salt-induced fluorescence quenching takes place at low salt concentration and is dependent both on temperature and detergent concentration. This transition seems to be related to a change in the lateral microorganization of LHCII. The second transition occurs at higher salt concentration and involves aggregation. It is independent of temperature and of detergent at sub-cmc concentrations. During the latter transition the small LHCII sheets (approximately 100 nm in diameter) are stacked to form larger aggregates of approximately 3 microm diameter. Based on the comparison between the physical properties of the transition and theoretical models, direct and specific binding of cations can practically be ruled out as driving force for the aggregation. It seems that in vitro aggregation of LHCII is caused by a complex mixture of different effects such as dielectric and electrostatic properties of the solution and surface charges.     

A new mechanism for adaptation to changes in light intensity and quality in the red alga,Porphyra perforata. II. Characteristics of state II—state III transitions

Characteristics of state II—state III transitions in the red alga, Porphyra perforata, were studied by measuring the fluorescence time course at room temperature and fluorescence spectra at 77 K. The state II to III transition was induced by system II light and was sensitive to uncouplers of photophosphorylation. This state II to III transition has a dark step(s) that could be easily separated from the light process. A state III to II transition occurred in the dark, but system I light accelerated the transition. The accelerating effect of system I light was not sensitive to uncouplers of photophosphorylation, but was inhibited by the addition of valinomycin + KCl or antimycin A. Compared to state I—state II transitions, the state II—state III transitions occurred more rapidly. The state II to state III transitions are different from the state I to state II transitions in that in state III the activity of photosystem II is changed without having any effect on photosystem I activity (Satoh and Fork, Biochim. Biophys, Acta, in press, 1982). It is suggested that the state II—state III transition represents a mechanism by which the alga can avoid photodamage resulting from absorption of excess light energy by photosystem II.     

去辅基天青蛋白两种天然构象共存的热力学证据 ———差热温度扫描和圆二色的研究

天然态蛋白质能否在溶液中存在多种构象是一个有争议的问题 . 在前报道中已经鉴定出绿脓杆菌去辅基天青蛋白突变体 M121L 可以多种构象共存 . 用差热扫描量热和圆二色性的方法研究了野生型去辅基天青蛋白的热变性 . 结果表明在 pH 从 4.0 到 9.0 的范围内存在着两个摩尔热容最大值 . 较低温度下的去折叠反应在所研究 pH 范围内均部分可逆,而较高温度下的去折叠反应均不可逆 . 蛋白质去折叠的热容变化双峰用可相互转化的两种构象共存模型进行拟合 . 较低温度下能够去折叠的构象在 pH 4.0 时占 64% ,在 pH 9.0 时占 55%. 监测热变性过程中圆二色谱在 219 nm 处的信号变化也可以观测到两个独立的去折叠变化 . 信号变化的比值与在相同条件下差热扫描法测得的两种构象摩尔比一致 . 上述结果进一步支持了前文提出的去辅基天青蛋白在溶液中至少存在着两种构象的设想 .     

Spectral, conformational and chemical properties of opossum methemoglobin

Opossum methemoglobin differs from methemoglobin A in spectral, spin state, conformational and chemical properties. The primary structural alterations in opossum hemoglobin, including the critical substitution at alpha 58 (E7) His leads to Gln result in the following properties. (a) Major contribution of the spectral transitions due to inositol hexakisphosphate binding arises from the alpha chains. (b) The aquomet to hydroxymet (high-spin to low-spin) transition as a function of pH is slightly retarded resulting in considerable high spin at alkaline pH. (c) The tertiary conformation (t) around the beta hemes, upon transition to a T quaternary state, differs from the known hemoglobin t tertiary structure. (d) Both alpha and beta hemes are susceptible to rapid reduction by ascorbic acid (the reduction rate being tenfold faster than that of methemoglobin A). These properties suggest that the heme environments in both the alpha and beta subunits of opossum hemoglobin are different from those of human hemoglobin A.     

Membrane contact, fusion, and hexagonal (HII) transitions in phosphatidylethanolamine liposomes

The behavior of phosphatidylethanolamine (PE) liposomes has been studied as a function of temperature, pH, ionic strength, lipid concentration, liposome size, and divalent cation concentration by differential scanning calorimetry (DSC), by light scattering, by assays measuring liposomal lipid mixing, contents mixing, and contents leakage, and by a new fluorometric assay for hexagonal (HII) transitions. Liposomes were either small or large unilamellar, or multilamellar. Stable (impermeable, nonaggregating) liposomes of egg PE (EPE) could be formed in isotonic saline (NaCl) only at high pH (greater than 8) or at lower pH in the presence of low ionic strength saline (less than 50 mOsm). Bilayer to hexagonal (HII) phase transitions and gel to liquid-crystalline transitions of centrifuged multilamellar liposomes were both detectable by DSC only at pH 7.4 and below. The HII transition temperature increased, and the transition enthalpy decreased, as the pH was raised above 7.4, and it disappeared above pH 8.3 where PE is sufficiently negatively charged. HII transitions could be detected at high pH following the addition of Ca2+ or Mg2+. No changes in light scattering and no lipid mixing, mixing of contents, or leakage of contents were noted for EPE liposomes under nonaggregating conditions (pH 9.2 and 100 mM Na+ or pH 7.4 and 5 mM Na+) as the temperature was raised through the HII transition region. However, when aggregation of the liposomes was induced by addition of Ca2+ or Mg2+, or by increasing [Na+], it produced sharp increases in light scattering and in leakage of contents and also changes in fluorescent probe behavior in the region of the HII transition temperature (TH). Lipid mixing and contents mixing were also observed below TH under conditions where liposomes were induced to aggregate, but without any appreciable leakage of contents. We conclude that HII transitions do not occur in liposomes under conditions where intermembrane contacts do not take place. Moreover, fusion of PE liposomes at a temperature below TH can be triggered by H+, Na+, Ca2+, or Mg2+ or by centrifugation under conditions that induce membrane contact. There was no evidence for the participation of HII transitions in these fusion events.     

Review on detection of critical transition in ecosystems

当一个存在多稳态的生态系统临近突变阈值点时, 外界条件即使发生一个微小变化, 也会引发生态系统的剧烈响应, 使之进入结构和功能截然不同的另一稳定状态, 这种现象称为重大突变(critical transition)。重大突变所导致的稳态转换总是伴随着生态系统服务的急剧变化, 可能对人类可持续发展产生重大影响。预测生态系统突变的发生非常困难, 但科学家在此领域的大量研究结果表明, 通过监测一些通用指标可以判断生态系统是否不断临近重大突变阈值点, 进而可以进行生态系统重大突变预警。该文对近年来生态系统重大突变检测领域所取得的成果进行总结与归纳, 论述了生态系统重大突变的产生机制及其后果, 介绍了生态系统突变预警信号提取的理论基础, 从时间和空间两个维度总结了近年来生态系统重大突变预警信号的提取方法, 概述了当前研究面临的挑战, 指出生态系统突变预警信号的检测应充分利用时空动态数据, 并且联合多个指标, 从多个角度进行综合预警, 此外, 还应重视生态系统结构与重大突变之间的关系, 增强生态系统突变预警能力。     

Effect of a mechanical tension on the hydration of DNA in fibres.

Fiber X-ray diffraction and measurement of fibre dimensions yield information about the effects of a mechanical tension on hydration of DNA in fibres. At a given relative humidity, the mechanical tension changes the DNA conformation but does not modify the number of water molecules associated to a nucleotide. The number of water molecules per nucleotide necessary to maintain B form decreases for increasing tensions applied to the DNA fibre. Form transitions can be opposed by mechanical tensions; an energy of 1 Kcal per mole of nucleotide pairs is sufficient to prevent the B to A transition.     

A dynamical model for phase transitions of lipids induced by calcium ions

Lipid membranes exist essentially in two different phases. A phase transition can be triggered off either by changing the temperature or, isothermally, by varying an external factor such as ionic concentration, pH, organic solvents, etc. Since the isothermal transition may be induced at physiological temperature, it may play an important regulatory role in diverse cellular functions. Based on the Landau-Ginsburg theory, the thermotropic transitions of lipids has been described by a number of models. In the present work a dynamical model for an isothermal phase transition of phospholipids induced by ionic binding is proposed. The properties of the model show that by ionic binding, phospholipids may form spatial heterogeneous distributions of lipids in fluid and crystalline phases. This heterogeneity possibly being the cause of membrane instabilities, which favour enhanced vesicle fusions observed in the presence of Ca2+.     

Unfolding-refolding behaviour of chicken egg white ovomucoid and its correlation with the three domain structure of the protein

The urea and heat-induced unfolding-refolding behaviours of chicken egg white ovomucoid and its four fragments representing domains I, II + III, I + II and III were systematically investigated in 0.06 M sodium phosphate buffer (pH 7.0) by difference spectral measurements. The effect of temperature on ovomucoid and its fragments was also studied in 0.05 M sodium acetate buffer (pH 5.0) and in presence of 2 M urea at pH 7.0. Intrinsic viscosity data showed that ovomucoid and its different fragments did not lose any significant amount of their structure under mild acidic conditions (pH 4.6). Difference spectral results showed extensive disruption of the native structure by urea or temperature. Isothermal transitions showed single-step for domain I, domain I + II and domain III, and two-step having one stable intermediate, for ovomucoid and its fragment representing domain II + III. However, the presence of intermediate was not detected when the transitions were studied with temperature at pH 7.0. Strikingly, the single-step thermal transitions of ovomucoid and its fragment representing domain II + III, became two-step when measured either at pH 5.0 or in presence of 2 M urea at pH 7.0. Analysis of the equilibrium data on urea and heat denaturation showed that the second transition observed with ovomucoid or domain II + III represent the unfolding of domain III. The kinetic results of ovomucoid and its fragments indicate that the protein unfolds with three kinetic phases. A comparison of three rate constants for the unfolding of intact ovomucoid with that of its various fragments revealed that domain I, II and III of the protein correspond to the three kinetic phases having rate constants 0.456, 0.120 and 0.054 min-1, respectively. These data have led us to conclude: (i) the unusual stability of ovomucoid towards various denaturants, including temperature, is due to its domain III, (ii) initiation of the folding of the ovomucoid molecule starts from its NH2-terminal region which probably provides the nucleation site for the formation of the subsequent structure and (iii) domains I and II have greater mutual recognition between them as compared to the recognition either of them have with domain III.     

A kinetic and spectral study of the alkaline transitions of chloroperoxidase

The optical spectrum of chloroperoxidase in the near ultraviolet and visible region was studied from pH 6 to 12. Chloroperoxidase undergoes a first transition which is irreversible at pH 7 and a second transition near pH 11. The second transition is reversible provided the incubation period above pH 11 is kept as short as possible. The spectral properties of the intermediates were studied in the Soret region by means of a rapid scan apparatus. The rates of the transitions were measured in a stopped-flow apparatus. The pH dependence of both the spectra and the rate constants indicate that at least three ionizations are involved in the first alkaline transition.