Lack of carriers of citrullinaemia and DUMPS in Indian Holstein cattle

The present study investigated the occurrence of 2 autosomal recessive genetic diseases, bovine citrullinaemia and deficiency of uridine monophosphate synthase (DUMPS), in Indian Holstein cattle. The polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis was performed on a group of 642 animals, mainly HF and HF crossbred cattle, to identify carriers of these diseases. None of the animals were carriers of citrullinaemia or DUMPS. It is possible that with the mounting selection pressure, the international gene pool may diminish, and consequently the risk of dissemination of inherited defects will increase. It is therefore recommended to screen breeding bulls for their breed-specific genetic diseases before they are inducted in artificial insemination programmes, to minimize the risk.     

Identification of carriers of the mutation causing coagulation factor XI deficiency in Polish Holstein-Friesian cattle

Factor XI (FXI) deficiency is a hereditary coagulation disorder observed in various mammalian species. The molecular basis of coagulopathy has been recognized in Holstein cattle as a 76-bp insertion in the coding region of theFXI gene. Because the disorder seems to have an impact on reproductive traits and udder health in cattle, we tested 103 randomly selected cows, 28 cows with repeat breeding, and 9 cows with recurrent mastitis for the presence of an abnormalFXI allele. Three related cows were diagnosed as carriers.     

Prion octapeptide-repeat polymorphism in Polish Black-and-White cattle

The study was carried out in a Polish Black-and-White cattle population, represented by 167 AI sires, 200 young tested bulls, 190 bull-dams, and 606 randomly chosen cows from commercial herds. The fragment of the bovine prion protein gene (PRNP) coding the octapeptide-repeat sequence, was identified by PCR analysis. Two different gene variants of 349 bp and 373 bp in size, produced three genotypes: PRNP 6/6, PRNP 6/5 and PRNP 5/5, respectively. Allele frequency in all examined populations, on average 0.894 for PRNP 6 and 0.106 for PRNP 5, shows a significant difference between the group of cows from commercial herds, characterised by high frequency of PRNP 5 (q = 0.137) in comparison to AI sires (q = 0.077), young tested bulls (q = 0.052) and bull-dams (q = 0.084). Moreover, both analysed female groups of bull-dams and cows from commercial herds are distinguished by the presence of PRNP 5/5 homozygous animals, which were not recorded in the AI sires and young tested bulls, and had never been recognised in earlier examined Holstein-Friesian populations. Analysis of the genetic equilibrium indicates a very high conformity between observed and expected number of animals in the separate PRNP genotype groups. However, some tendency of difference is observed in highly selected cows, qualified as bull-dams on the basis of very high level of milk performance traits.     

Gait assessment in dairy cattle

Lameness is one of the most important dairy cow welfare issues and has inspired a growing body of literature on gait assessment. Validation studies have shown that several methods of gait assessment are able to successfully distinguish cows with and without painful pathologies. While subjective methods provide an immediate, on-site assessment and require no technical equipment, they show variation in observer reliability. On the other hand, objective methods of gait assessment provide accurate and reliable data, but typically require sophisticated technology, limiting their use on farms. In this critical review, we evaluate gait assessment methods, discuss the reliability and validity of measures used to date, and point to areas where new research is needed. We show how gait can be affected by hoof and leg pathologies, treatment of these ailments and the pain associated with lameness. We also discuss how cow (e.g. conformation, size and udder fill) and environmental features (e.g. flooring) contribute to variation in the way cows walk. An understanding of all these factors is important to avoid misclassifying of cows and confounding comparisons between herds.     

Postpartum anestrus in dairy cattle

Fertility of the postpartum period is negatively influenced by the incidence of anestrus. The latter condition is characterized by the absence of estrous behavior, which may be an indication of suboptimal conditions (e.g., inadequate peripartum nutrition) or pathologic conditions (e.g., chronic debilitating diseases or uterine and ovarian diseases). Although initiation of ovarian follicular growth in the postpartum period is generally not affected, subsequent development (deviation) and the fate of the dominant follicle are the primary factors that affect reestablishment of ovarian cyclicity. Anestrus can be classified based on the three functional states of follicular development; that is, follicle emergence, deviation, and ovulation. Prevention of anestrus is preferable to treatment and can be achieved in part by maintaining a healthy periparturient period. To better understand the etiology of anestrus and its prevention, research is urgently needed in the following three areas: the role of peripartum disease conditions that influence reproduction, genes involved in ovulation, and the influence of proteins (e.g., leptin) that appear to be important links between metabolic signals and the neuroendocrine axis.     

Social dominance in dairy cattle

The meaning of “social dominance” and the problems associated with its use are discussed. Most problems disappear if dominance is restricted to the phenomenon that in every pair of animals one member can inhibit the behaviour of the other. The dominance order of the group is the sum of all such inhibitory relationships. Dominant animals probably have been aggressive in the past to obtain their dominant positions, but a dominant animal need not be aggressive now. Measures of the dominance position of animals in a herd should be based on observations in the particular herd, contain sufficient observations to be reliable, reflect the actual magnitude of differences between animals, and be normally distributed. The method of Beilharz and Mylrea (1963) meets these requirements. The application of this method is discussed.The dominance structure of three dairy herds near Freiburg in South West Germany were studied. None of the herds had an individual cow who was dominant over all others in the herd. Parameters of social structure varied from herd to herd. The findings are discussed in relation to differences in space per animal, manner of recruitment of young stock to the herds, presence of horns and other features. It is concluded that the dominance relationship of any pair of animals is a result of learning, with many different factors, including trivial ones, being involved in the initial serious formation of the relationship. Once learnt, dominance relationships for each pair of animals persist for a long time. While bidirectional dominance relationships are found in young animals, where none has yet accepted dominance of others, mature animals of all species of domestic livestock generally have clear unidirectional dominance relationships. The dominance order of the group may be no more than the sum of the individual relationships. Dominant animals are freer than others in attending to stimuli from outside the herd.     

Low incidence of bovine leukocyte adhesion deficiency (BLAD) carriers in Indian cattle and buffalo breeds

BLAD is an autosomal recessive genetic disease that affects Holstein-Friesian (HF) cattle worldwide. It is a disease characterized by a reduced expression of the adhesion molecules on neutrophils. The disease is caused by a mutation that replaces adenine at 383 with guanine, which causes an amino acid change from aspartic acid to glycine. Blood samples and a few semen samples were collected from 1250 phenotypically normal individuals, including HF (N=377), HF crossbred (N=334), Jersey (105), other breeds of cattle (N=160) and water buffalo Bubalus bubalis (N=274) belonging to various artificial insemination stations, bull mother farms (BMFs) and embryo transfer (ET) centres across the country. PCR-RFLP was performed to detect a point mutation in CD18, surface molecules of neutrophils. The results indicate that out of 1250 cattle and buffaloes tested for BLAD, 13 HF purebreds out of 377 and 10 HF crossbreds out of 334 appear to be BLAD carriers. In the HF and HF crossbred population, the percentage of BLAD carriers was estimated as 3.23%. The condition is alarming as the mutant gene has already entered the HF crossbred cattle population and therefore, the population of HF and its crossbreds needs regular screening to avoid the risk of spreading BLAD in the breeding cattle population of India.     

Deficiency of uridine monophosphate synthase (DUMPS) and X-chromosome deletion in fetal mummification in cattle

Ten mummified fetuses were tested for the deficiency of uridine monophosphate synthase (DUMPS), which is known to contribute to the embryonic and fetal mortality in cattle. Genomic DNAs of the mummified fetuses were extracted from tissue samples collected from the mummies and were amplified by GenomiPhi DNA amplification kit. UMPS gene of the mummies was amplified by polymerase chain reaction (PCR) with DUMPS primers. Out of ten mummies examined, two fetuses were heterozygous (carriers) for DUMPS as indicated by the presences of three bands of 89, 53 and 36 bp. Estimated stage of gestation when the death occurred in the two mummies was 3.5 and 2.5 months, respectively. The other fetuses exhibited only two bands of 53 and 36 bp on the polyacrylamide gel indicated that they were normal. On the other hand, all the mummies were sexed using AMX/Y primers. Specific regions of Y and X chromosomes were amplified by PCR using AMX/Y. The expected 280 bp fragment in the female sample and the 280 and 217 bp in the male sample were observed. Nine mummies had a normal X and Y chromosome bands; however, the other mummified fetus exhibited only Y chromosome band, while the constitutive X chromosome fragment was missing. The estimated stage of gestation when the death occurred in this mummified fetus was 100 days. This might be the first report of DUMPS and X-chromosome deletion at the amelogenin gene in bovine-mummified fetuses in Japan.     

Pedigree analysis in the Polish Red cattle population

The objective of this study was to describe the population structure and inbreeding level of the population of Polish Red Cattle (PRC). The structure of the breed was analysed in the context of the existing genetic resources conservation programme. The level of genetic diversity and the effective population size were also determined. The analyses were carried out based on pedigree records of 9 170 animals. Data and pedigree information were collected during the time period of 1950–2014. Records were collected by the National Research Institute of Animal Production in Balice, Poland. The population structure was analysed using the CFC programme. All the animals were grouped into five classes according to their inbreeding coefficient: the first class included non-inbred animals; and the next classes included inbred animals 0% < F ≤ 5%, 5% < F ≤ 10%, 10% < F ≤ 20%, 20% < F ≤ 30% or F > 30%. The average inbreeding in PRC population was 4% and there were 2 182 (23.8%) inbred animals. The study also included the determination of ancestral paths for the PRC population. The longest ancestral path (LAP) consisted of 12 generations (three animals) while only 229 animals (2.53%) had an LAP comprising at least 10 generations. Therefore, a need exists, particularly in PRC as a small local breed, to manage selection and mating decisions to control future coancestry and inbreeding, which would lead to better handling of the effective population size. The study results showed the possibility of disrupting the balance of the structure of a small population like PRC. Hence, endangered populations need to be monitored on a continuous basis.     

Biodiversity of Lactococcus lactis bacteriophages in Polish dairy environment

We present here the results of an exploration of the bacteriophage content of dairy wheys collected from milk plants localized in various regions of Poland. Thirty-three whey samples from 17 regions were analyzed and found to contain phages active against L. lactis strains. High phage titer in all whey samples suggested phage-induced lysis to be the main cause of fermentation failures. In total, over 220 isolated phages were examined for their restriction patterns, genome sizes, genetic groups of DNA homology, and host ranges. Based on DNA digestions the identified phages were classified into 34 distinct DNA restriction groups. Phage genome sizes were estimated at 14-35 kb. Multiplex PCR analysis established that the studied phages belong to two out of the three main lactococcal phage types--c2 and 936, while P335-type phages were not detected. Yet, analyses of bacterial starter strains revealed that the majority of them are lysogenic and carry prophages of P335-type in their chromosome. Phage geographical distribution and host range are additionally discussed.     

Hoof overgrowth in Holstein--Friesian dairy cattle

The genetic etiology of hoof overgrowth, a widespread problem in Holstein-Friesian cattle, was examined. Although all four feet are affected, the hind feet usually have a greater degree of overgrowth. There is a distinct age tendency for the trait; the younger cows' hooves grow faster than those of the older cows, but the overgrowth in older cows reaches greater proportions. Analysis of variance of chi-square frequency tests showed that there is a component of heritability involved in the expression of the trait, but that it follows a more complex model than a simple autosomal recessive gene would show.     

Inheritance of UMP synthase in dairy cattle

The inheritance of uridine-5'-monophosphate (UMP) synthase in dairy cattle was consistent with a two-allele, single-autosomal-locus model. Two phenotypes were associated with different levels of the enzyme in bovine erythrocytes. The predominant phenotype (assumed normal) had twice the concentration of UMP synthase as the second phenotype (deficient). A one-to-one correspondence between enzyme level and genotype identified one homozygote as normal, the heterozygote as deficient, and the other homozygote as unobserved. Three alternative hypotheses were rejected. The deficiency as homozygous recessive was rejected because 20 matings between assumed normal males and deficient females resulted in 10 normal and 10 deficient offspring. The hypothesis that the deficiency was homozygous dominant was rejected because the 95 percent confidence interval about the observed gene frequency, 0.0024 to 0.0146, did not contain the estimated gene frequency for equilibrium between an average 10(-5) mutation rate and selection against the deficiency as homozygous dominant. Analyses of female relatives implicated one bull as deficient (96 percent probability), as he had, independently, 2 deficient daughters, 5 deficient granddaughters from untested dams, and 3 deficient great-granddaughters from untested ancestors. The hypothesis that the deficiency was sex-linked was rejected because 3 of 9 tested sons of the putative deficient bull were deficient. Calf mortality is expected in 25 percent of matings between deficient animals.     

Rheological properties of dairy cattle manure

Rheological properties are important for the design and modelling of handling and treating fluids. In the present study, the viscosity of liquid manure (about 10% total solids) was measured at different shear rates (2.38-238 s(-1)). The effect of temperature on the viscosity at different shear rates was also studied. The results showed that manure has non-Newtonian flow properties, because the viscosity strongly depended on the applied shear rate. The results showed also that manure behaves like real plastic materials. The power-law model of the shear stress and the rate of shear showed that the magnitude of the consistency coefficient decreased while increasing the temperature, with high values of the determination coefficient. Moreover, the results showed that the Arrhenius-type model fitted the temperature effect on manure viscosity very well (R2 at least 0.95) with calculated activation energy of 17.0+/-0.3 kJ mol(-1).     

Prevalence of complex vertebral malformation carriers among Polish Holstein-Friesian bulls

An increasing number of Holstein calf births exhibiting vertebral deformations has been detected in Denmark since 1999 by a program monitoring the incidence of genetic diseases. Pedigree analysis demonstrated that the affected calves originated from a family afflicted by an autosomally recessively inherited complex vertebral malformation (CVM) syndrome. To determine the actual carrier frequency of the CVM-determining mutation in a population of Polish Holstein-Friesian (=Polish Black-and-White) cattle, we examined 202 proven bulls (active in 2001–2005) used by 4 domestic artificial insemination companies and 403 unproven bulls (under evaluation for breeding value). Out of the 605 bulls examined, 150 T/G heterozygotes were diagnosed, including 118 that were sons of known CVM carriers. Identification of a gene polymorphism in a bovine solute carrier family 35 member 3, termedSLC35A3, was conducted with the use of a new PCR-SSCP method (polymerase chain reaction - single stranded conformation polymorphism), which - due to its ease of use and high reliability - can be applied in widespread screening programs aimed at reducing the incidence of the CVM defect.     

Serum post-albumins and fertility in dairy cattle

Blood samples from 180 Guernsey cows and 599 Holstein cows were typed for post-albumins (Poa). The genotypes were compared for breeding efficiency, mean return interval, anestrus interval, service interval, gestation length and lactation length. Poa SF cows had a significantly shorter (P < 0.01) mean return interval than SS cows. The effect is associated with order of insemination, but is independent of lactation number. None of the other parameters showed genotypic differences.     

Factors affecting gestation length in dairy cattle

Data were collected through a special record keeping system for 2,254 herds that used artificial insemination, 37% of which were enrolled in Dairy Herd Improvement Associations. Information was available on a total of 35,162 gestations, consisting of 24,367 Holstein, 5,849 Guernsey, 2,872 Jersey, 1,667 Ayrshire and 407 Brown Swiss pregnancies resulting in single births plus 930 multiple births. Breeds, twinning, sex of calf, parity of the cow and time of day on which estrus occurred were associated with differences in gestation length. Month of insemination had no effect. Mates and sires of the cows both affected gestation length slightly, but significantly. Selection of sires for high milk production of their daughters over a 23-year period appears to have had little, if any, effect on gestation length, as the mean gestation length has increased only one day, from 278 to 279 days for Holsteins during that time.