Leaf anatomy as a constraint for photosynthetic acclimation: differential responses in leaf anatomy to increasing growth irradiance among three deciduous trees

Interspecific variation in the response to transfer from low to high growth irradiance with respect to anatomical and photosynthetic characteristics was studied in mature leaves of three tree species, Betula ermanii Cham., Acer rufinerve Sieb. et Zucc. and Fagus crenata Blume, which occur in different successional stages in temperate deciduous forests. Transfer from low to high irradiance increased the light-saturated rate of photosynthesis per unit leaf area ( P _max) significantly in B. ermanii and A. rufinerve , but not in F. crenata . Leaves of B. ermanii grown at low irradiance were relatively thick and had vacant spaces along the mesophyll cell surfaces which was not occupied by chloroplasts or other organelles. After transfer to high irradiance, chloroplasts enlarged to fill the space along with P _max without an increase in leaf thickness. Leaves of A. rufinerve were plastic in mesophyll cell surface area and in leaf thickness, both of which increased after the transfer to high irradiance, along with an increase in the amount of chloroplasts and in P _max. On the other hand, F. crenata had little mesophyll cell surface unoccupied by chloroplasts and leaf anatomy was not changed after the transfer. In all species, P _max was strongly correlated with chloroplast surface area adjacent to the exposed mesophyll surface across different growth irradiances. An increase in P _max was observed only when chloroplast volume also increased. We conclude that light acclimation potential is primarily determined by the availability of unoccupied cell surface into which chloroplasts expand, as well as by the plasticity of the mesophyll that allows an increase in its surface area.     

Photosynthesis, nitrogen allocation and specific leaf area in invasive Eupatorium adenophorum and native Eupatorium japonicum grown at different irradiances

The mechanisms underlying biological invasions are still not well elucidated. In this study, ecophysiological traits of invasive Eupatorium adenophorum and native E.   japonicum were compared at 10 irradiances in field. I hypothesized that the invader may allocate a higher fraction of leaf nitrogen (N) to photosynthesis and have higher light-saturated photosynthetic rate ( P _max) and specific leaf area (SLA) than E.   japonicum . The invader had a significantly higher ability to acclimate to high irradiance than E.   japonicum , while it showed a similar shade-tolerant ability. The invader indeed allocated a higher fraction of leaf N to photosynthesis than E.   japonicum , which, with its high leaf N content ( N _A), resulted in a higher N content in photosynthesis ( N _P), contributing to its higher biochemical capacity for photosynthesis and P _max. However, the invader had a significantly lower SLA than E.   japonicum , contributing to its higher P _max but increasing its area-based leaf construction cost. The abilities to acclimate to a wider range of irradiance and to allocate a higher fraction of leaf N to photosynthesis, and the higher P _max, N _A, N _P and leaf area ratio may contribute to the invasion of the invader. High SLA is not always necessary for invasive species.     

Relationship between opercular girth, maximum girth and total length of fishes caught in gillnets in the estuarine and lower river sections of Shatt al-Arab River (Basrah Province, Iraq)

In fisheries, the two morphological parameters of opercular and maximum girth are related to the effectivity of capture methods in gilled and wedged fish, respectively. The present work investigates the relationship between opercular ( G _ope) and maximum girths ( G _max) to total length ( L _t) for 10 fish species captured from Shatt al-Arab River, Basrah, Iraq. Data were collected October 2005 to December 2006. Cyprinids were the best represented family with six species; engraulids, silurids, heteropneustids and mugilids were each represented by one species. G _ope and G _max were found to increase linearly with total length of all species, all r ² values being greater than 0.73 and statistically significant (P < 0.01). When G _ope and G _max for all species were plotted against total length, two groups were identified ( G 1, G 2), corresponding to general girth-length relationships: (a) G 1 = −0.252 + 0.424 L _t and G 2 = −0.262  +  0.600 L _t for opercular girth and, (b) G 1 = 1.538 + 0.419 L _t and G 2  =  1.538  +  0.696 L _t for maximum girth. These groups correspond to different body shapes of fishes: G 1-round and G 2-compressed. These relationships have implications when using length data and mesh size to determine size selectivity of gill nets.     

Continuous light may induce photosynthetic downregulation in onion – consequences for growth and biomass partitioning

Onions were grown in environmentally controlled growth chambers for 85 days to investigate the effect of relatively low light intensity (350 µmol m⁻² s⁻¹) at two different total irradiance periods (12-h and 24-h photoperiods) on growth and photosynthetic performance. To test whether photosynthetic downregulation occurred due to carbohydrate feedback, we used onions that differed in bulb-forming capacity. Allium fistulosum (L. cv. 'Kinka') is a non-bulbing onion, with potentially limited carbohydrate storage capacity, while Allium cepa (L. cv. 'Cal 296') is a bulb-forming onion with possibly greater carbohydrate storage capacity. In A . fistulosum , photosynthetic downregulation was observed in 24-h plants as indicated by reductions in the light- and CO₂-saturated photosynthetic capacity ( A _sat and A _max, respectively) by 26%, reduced maximum rate of carboxylation ( V _cmax) by ribulose-1,5-biphosphate carboxylase/oxygenase (Rubisco) by 33%, reduced maximum rate of electron transport ( J _max) by 27% and 3-fold higher foliar sugar concentration. In contrast, the photosynthetic and biochemical capacity of A . cepa was not affected by exposure to 24-h photoperiod, presumably because substantial amounts of foliar carbohydrates were re-allocated to bulbs. In 24-h A . cepa , up to 84% of total plant mass was allocated to bulbs, while in 12-h plants, more mass was allocated to leaves. Production of greater leaf area in 12-h plants compared with 24-h plants compensated for lower total daily irradiance such that 12-h and 24-h plants of both species exhibited similar daily total leaf net CO₂ exchange and plant mass at the end of the experiment.     

THE RESPONSE OF GROWTH AND BIOCHEMICAL COMPOSITION TO VARIATIONS IN DAYLENGTH, TEMPERATURE, AND IRRADIANCE IN THE MARINE DIATOM THALASSIOSIRA PSEUDONANA (BACILLARIOPHYCEAE)

The relationships between the growth rate of the marine diatom Thalassiosira pseudonana (Hustedt) and irradiance, daylength, and temperature were determined in nutrient-sufficient semicontinuous cultures. The initial slopes of the growth versus total daily irradiance curves were not affected by temperature or daylength. Growth versus irradiance was best modeled as a hyperbolic function at short daylengths and better modeled as an exponential function at longer daylengths. The maximum or light-saturated growth rates at each daylength were modeled as a hyperbolic function of daylength. This model was extended in a novel manner to include temperature dependence providing a framework that can be used to interpret other experimental data on growth rate versus daylength. The resulting model should be useful in global models of phytoplankton growth. Carbon, nitrogen, and chl a quotas were influenced by daylength, irradiance, and temperature. Both C and N quotas were positive exponential functions of irradiance, whereas N and chl a quotas were significantly greater for cells grown at the lower temperature. The ratio chl a :C quota (chl a :Q_c) was a strong negative exponential function of total daily irradiance. Cells grown at 10° C had significantly greater chl a :Q_c ratios than those grown at 18° C, and daylength also had a significant positive influence on chl a :Q_c. The apparent effect of daylength on chl a :Q_c was removed by standardizing chl a :Q_c to growth rate (μ), resulting in a temperature-dependent relationship between chl a :Q_c·μ⁻¹ and irradiance that accounted for 95% of the variation in the data.     

ESTIMATION OF THE KINETIC PARAMETERS OF UNIDIRECTIONAL TRANSPORT ACROSS THE BLOOD-BRAIN BARRIER

Abstract— The unidirectional transport of metabolic substrates from blood to brain may be defined in terms of Michaelis-Menten saturable ( K m, V _max) and non-saturable ( K _d) components of influx. Various computation procedures have been previously reported to estimate the kinetic parameters when an intracarotid injection technique is used. Transformations of the influx data which allow linear plots to obtain estimates were compared with estimates obtained directly from a best fit on a least means squares criterion for both experimental and simulated data. Large discrepancies were apparent between the various estimates of the kinetic parameters when an equal weight was given to transformed data. For pyruvate (21-day-old rats), K _m, values varied between 1.02 and 6.25 mM and V _max varied between 0.68 and 2.30 μmol g⁻¹ min⁻¹. The estimates were almost equivalent when pyruvate data was re-analysed using a weighting scheme based on the finding that the absolute value of the S.D. of influx increased in proportion to influx. It is recommended that estimates of kinetic parameters be obtained by an iterative, non-linear least squares method to fit appropriately weighted data directly.     

Evidence for the independent regulation of hyphal extension and branch initiation in Fusarium graminearum A3 5

Abstract Addition of 100 μM choline chloride to the medium increased (by approx. 36%) both the length of the hyphal growth unit ( G a measure of mycelial branching) and the mean hyphal extension rate ( E ) of Fusarium graminearum but did not increase the maximum rate of extension of the hyphae ( E _max). The paramorphogen, edifenphos (Hinosan) reduced G and E without affecting specific growth rate (μ). However, when mycelia were treated with edifenphos plus choline, μ was reduced, G was increased by approx. 35%, but E and E _max were not affected. The results suggest that the primary effect of edifenphos is inhibition of hyphal extension, whilst the primary effect of choline is inhibition of branch initiation.     

Attached and Free Bacteria in an Estuary with Abundant Suspended Solids

Concentrations and glucose mineralization potentials ( V _max) of attached and free bacteria in waters from the Humber estuary were determined. The waters had high concentrations of suspended solids. Most bacteria were attached to suspended solids and V _max of attached bacteria was greater than that of free bacteria. These observations suggest that breakdown of organic matter is carried out mainly by attached bacteria. Examination of samples from other estuaries which contained less suspended solids than the Humber suggested that in these estuaries free bacteria might be more abundant than attached bacteria.     

KINETICS OF BLOOD-BRAIN BARRIER TRANSPORT OF PYRUVATE, LACTATE AND GLUCOSE IN SUCKLING, WEANLING AND ADULT RATS

Abstract— The kinetics of the uptake from blood to brain of pyruvate, lactate and glucose have been determined in rats of different ages. The carotid artery single injection technique was used in animals anaesthetized with pentobarbital. The rates of influx for each substrate were determined over a range of concentrations for the different age-groups. Data were analysed in terms of the Michaelis-Menten equation with a component to allow for non-saturable diffusion. Values are given for K _m, V _max and K _d. In suckling rats (15-21 days) the V _max values for both pyruvate and lactate were 2.0 μmol g⁻¹ min⁻¹. In 28-day-old rats the V _max values had fallen to one-half and in adults they were less than one-tenth. K _m, values were higher in the younger animals. The rate of glucose transport in suckling rats was half that of 28-day-old and adults although there was no difference with age in the K _m values.
The results are discussed in relation to the net flux of these substrates in and out of brain during different stages of post-natal development.     

The growth of brown trout (Salmo trutta) in mild winters and summer droughts in upland Wales

SUMMARY. 1. We compared the observed annual growth of 0- and I-group trout in nine Welsh upland streams, with growth predicted from temperature assuming that this was the only limiting factor.
2. Autumn weights of second year fish were 51–67% of predicted ( G _max) values in 1988, but only 30–40% in 1989 and 1990 when drought occurred. Though initial weights of fry were unknown, simulations suggested that first year growth was also less than G _max, but with no obvious effect of drought.
3. To evaluate the possible effects of future climate change, we simulated stream temperature regimes 1.5–4.5°C above those of a recent year with temperatures similar to the long-term average. Growth was set at 60% G _max for both 0- and I-group, or at 40% for I-group to represent the effect of drought. As winter temperature increased, time to hatching and emergence decreased, for example by 56 and 49 days respectively for a rise of 3°C. 0-group growth was slightly enhanced at up to + 3°C but retarded at + 4.5°C. Simulations of I-group growth suggested that warmer winters could enhance trout growth while warmer summers would only increase growth if there were no adverse effects of drought.
4. We discuss many uncertainties in these simulations, which nevertheless suggest the magnitude of possible effects of climate change.     

Microcalorimetric assessment of microbial activity in long-term fertilization experimental soils of Southern China

Microcalorimetry, plate count and PCR–denaturing gradient gel electrophoresis (DGGE) were employed to investigate microbial diversity and activity in soils from the Red Soil Experimental Station of the Chinese Academy of Agricultural Sciences, Hunan Province, China, where a wheat–corn rotation with 12 fertilization treatments was established in 1990. Fertilization greatly increased microbial biomass carbon (C) and nitrogen (N) (C_mic and N_mic) as well as the activities of phosphatase, urease, invertase, protease, catalase and dehydrogenase. Manure alone (M) enhanced the number of denitrifying and aerobic bacteria by 54.4% and 20.5%, respectively, whereas fallow (H) increased the number of aerobic cellulose decomposing bacteria by 31.4%. Fallow and soils amended with mineral fertilizers plus pig manure or straw increased both the DGGE band patterns and the Shannon index compared with mineral fertilizers or the control. Mineral treatments with lower bacterial numbers enhanced the values of the peak time ( t _max) more than did organic treatments. The peak height ( P _max) was positively correlated ( P <0.01), with soil enzymes, C_mic and N_mic, and the number of microorganisms, whereas the peak time ( t _max) was negatively connected ( P <0.01) with these parameters. The microbial growth rate constant ( k ) was linked to bacteria ( P <0.01), actinomycetes ( P <0.05) and catalase ( P <0.05). The total heat evolution ( Q ) had no relationships with any soil microbial properties (except for catalase). We propose that P _max and t _max could be used as indices of soil microbial activity, while the values of k and Q are poor indicators.     

Population growth rates of two closely related rotifer species: effects of food quantity, particle size, and nutritional quality

SUMMARY. 1. The relationship between population growth rates and the concentrations of several algal species was determined in laboratory experiments with the rotifers Brachionus rubens and B. calyciflorus .
2. The effects of food quantity were well described by a modified Monod model with a threshold for zero population growth. The model parameters depended on particle size and nutritional quality of the food algae. Differences between the rotifer species were significant and reflected their varying food-size preferences.
3. For each rotifer species, thresholds were lowest for algae in the most readily ingested size range. The lowest thresholds were 0.07–0.09 mgC 1⁻¹ with algae of about 5 μm equivalent spherical diameter (ESD) for B. rubens , and 0.19 mgC 1⁻¹ with algae of about 10 μm ESD for B. calyciflorus .
4. Maximal growth rates ( r _max) were slightly below 0.8 day⁻¹ for both rotifers with most algal species. The highest r _max values for both rotifers were observed when Cyclotella meneghiniana was provided as food. With this alga, B. calyciflorus had a significantly higher r_max (1.02 day⁻¹) than B. rubens (0.838 day⁻¹).
5. From a comparison of the relationship between growth rates and ingestion rates, Chlamydomonas reinhardii appeared to be of low nutritional quality for B. rubens .
6. Egg ratios were related to growth rate and were not influenced by the algal food used. Egg development times and average mortality rates were estimated from the relationship between egg ratio and growth rate. B. calyciflorus appeared to have a high average mortality rate (0.383 day⁻¹) compared to B. rubens (0.083 day⁻¹).     

Modelling the growth of Weissella cibaria as a function of fermentation conditions

Aims:  To investigate the effect of pH, water activity ( a _w) and temperature on the growth of Weissella cibaria DBPZ1006, a lactic acid bacterium isolated from sourdoughs.
Methods and Results:  The kinetics of growth of W. cibaria DBPZ1006 was investigated during batch fermentations as a function of pH (4·0–8·0), a _w (0·935–0·994) and temperature (10–45°C) in a rich medium. The growth curve parameters (lag time, growth rate and asymptote) were estimated using the dynamic model of Baranyi and Roberts (1994. A dynamic approach to predicting bacterial growth in food. Int J Food Microbiol 23, 277–294). The effect of pH, a _w and temperature on maximum specific growth rate (μ_max) were estimated by fitting a cardinal model. μ_max under optimal conditions (pH = 6·6, a _w = 0·994, T  = 36·3°C) was estimated to be 0·93 h⁻¹. Minimum and maximum estimated pH and temperature for growth were 3·6 and 8·15, and 9·0°C and 47·8°C, respectively, while minimum a _w was 0·918 (equivalent to 12·2% w/v NaCl).
Conclusions:  Weissella cibaria DBPZ1006 is a fast-growing heterofermentative strain, which could be used in a mixed starter culture for making bread.
Significance and Impact of the Study:  This is the first study reporting the modelling of the growth of W. cibaria , a species that is increasingly being used as a starter in sourdough and vegetable fermentations.     

Adaptation of Escherichia coli growth rates to the presence of pBR322

Changes in the growth rate of Escherichia coli K12 J62-1 in response to the presence of plasmid pBR322 have been investigated. Plasmid-free and plasmid-containing strains were grown in batch culture and their maximum specific growth rate (μ_max) determined. The acquisition of pBR322 by the host resulted in a decreased μ_max. Following repeated subculturing of the plasmid-containing strain on selective medium, restoration in μ_max was observed. The copy number and structure of the plasmid were not significantly altered during the experiment Growth rate measurements for a series of strains constructed using a combination of host cells and plas-mids with and without culture histories, indicated that the site of the adaptive mutation was located on the host chromosome rather than on the plasmid.     

Growth and end-product formation in fermenter cultures of Brochothrix thermosphacta ATCC 11509T and two psychrotrophic Lactobacillus spp. in different gaseous atmospheres

The effects of different gaseous atmospheres were determined on the maximum specific growth rate (μ_max) and end-product formation by Brochothrix thermosphacta ATCC 11509^T, Lactobacillus viridescens SMRICC 174 and Lactobacillus sp. SMRICC 173 (homofermentative). The highest μ_max-values for Lact. viridescens (0.47/h) and Broc. thermosphacta (0.49/h) were obtained in air. Under anaerobic conditions μ_max was reduced, an atmosphere containing CO₂ alone giving the greatest reduction. Lactobacillus sp. 173 did not grow in air or N₂. Aerobic growth was obtained by adding peroxidase while anaerobic growth occurred in the presence of 5–20% CO₂. Carbon dioxide alone reduced the growth rate. All test organisms produced mainly lactic acid anaerobically. Lactobacillus viridescens also produced ethanol while Broc. thermosphacta produced small amounts of ethanol and formic acid. With O₂ present, the number of end-products increased for all organisms. Lactobacillus sp. 173 produced small amounts of acetic acid and acetoin together with lactic acid. Oxygen induced acetic acid production in Lact. viridescens and Broc. thermosphacta . Aerobically, Broc. thermosphacta also produced a large amount of acetoin and smaller amounts of 2,3-butanediol, iso -valeric acid and iso -butyric acid. The production of lactic acid by Broc. thermosphacta was completely prevented under strictly aerobic conditions. All test organisms consumed O₂ during aerobic growth. Hydrogen peroxide was produced by Lact. viridescens and Lactobacillus sp. 173.     

Methanogenesis from methanol in Methanosarcina barkeri studied using membrane inlet mass spectrometry

Abstract A mass spectrometer with membrane inlet was used to study methanol metabolism by Methanosarcina barkeri strain MS. The addition of methanol to methanol grown culture samples in the mass spectrometer vessel stimulated methanogenesis and hydrogen production. The apparent K _s for methanol was determined as 0.5 mM and the V _max as 8.14 mmol g (dry weight) h⁻¹. The V _max for methane production was fairly constant during growth of the culture on methanol implying that growth is tightly coupled to methanogenesis. The addition of methanol to culture samples in the mass spectrometer vessel stimulated methanogenesis with no lag which indicated that methanogenesis can be uncoupled from growth. Exposure of the culture sample in the mass spectrometer vessel to an atmosphere of 2 kPa oxygen for 80 min resulted in a decrease in the rate of methanogenesis from methanol but on returning the atmosphere to nitrogen the addition of further methanol stimulated methanogenesis. The effect of other inhibitors of methanogenesis (2-bromoethane sulphonate and monensin); K _j values 21.5 μM and 0.3 mM, respectively) were also studied.     

On the visual pigments of deep-sea fish

The retinal visual pigments of 52 species of deep-sea fish were measured by partial bleaching of detergent extracts. The retinae of 45 species contained only a single rhodopsin with maximum absorbance (λ_max) at a wavelength between 474 and 490 nm, matching both the region of highest intensity downwelling sunlight and the maximum emission of most deep-sea bioluminescence. Seven species were shown to have more than one visual pigment within their retinae and these had λ_max values that generally fell outside the usual range. One of these, Bonapartia pedaliota , was particularly interesting as, unlike most such multipigment species, it had one rhodopsin and one porphyropsin pigment, apparently based on different opsins. The relative proportions of the visual pigments in the seven multipigment species are presented.     

Comparisons of swimming performance in rainbow trout using constant acceleration and critical swimming speed tests

Maximum swimming performance of seasonally acclimated rainbow trout Oncorhynchus mykiss was compared among short-duration constant acceleration tests ( U _max) and with the well established, but longer duration critical swimming speed ( U _crit) test. The present results show that U _max was insensitive to a range of acceleration rates that differed by more than three-fold. Thus, test duration could be reduced from 58 to 18 min without affecting the estimate of U _max. The value of U _max, however, was up to 57% higher than U _crit. Only the slowest acceleration rate tested (an increase of 1 cm s⁻¹ every min) had a significantly lower U _max, and this was up to 19% higher than U _crit. Even so, the potential saving in the test duration was small (70 v. 90 min) when compared with a ramp- U _crit test (a standard U _crit test but with the water velocity initially ramped to c . 50% of the estimated U _crit). Therefore, swim tests that are appreciably shorter in duration than a ramp- U _crit test result in U _max being appreciably greater than U _crit. An additional discovery was that the ramp- U _crit performance of cold-acclimated rainbow trout was independent of the recovery period between tests. These results may prove useful in making comparisons among different swim test protocols and in designing swim tests that assess fish health and toxicological impacts.     

Reproductive characteristics and population decline of four species of skate (Rajidae) off the eastern coast of Canada

Four of the most common species of skate (Rajidae) were studied off eastern Canada to determine if their reproductive characteristics were linked to their population trajectories. The fecundity of the winter skate Leucoraja ocellata , the little skate Leucoraja erinacea , the thorny skate Amblyraja radiata and the smooth skate Malacoraja senta averaged between 41 and 56 egg cases per year for each species. For all species but L. ocellata , males matured at larger sizes and at later ages than females. Theoretical rates of population increase for non-equilibrium populations of L. ocellata ( c . 0·07), M. senta ( c . 0·14) and L. erinacea and A. radiata ( c . 0·20) were low compared to most fishes, indicating that north-west Atlantic skates are intrinsically unproductive, yet are theoretically capable of supporting low-level fisheries. Nevertheless, the results of 36 years of research surveys indicate that the abundance of mature L. ocellata , A. radiata and M. senta all decreased by >90% since 1970, indicating that past fishing mortality (both directed and undirected) has outstripped the net productivity of the skate populations on the eastern Scotian Shelf. The relationship between maximum age ( t _max) and age of maturity ( t _mat) was a better predictor of population growth rate than was body size, with the species exhibiting the highest ratios of t _mat : t _max ( L. ocellata = 0·68, M. senta = 0·66) having the lowest predicted population growth rates. L. ocellata appears to have the lowest productivity and has experienced the greatest population decline, thus raising concerns over its future status.