Setal morphology of the grooming appendages of Macrobrachium rosenbergii (Crustacea: Decapoda: Caridea: Palaemonidae) and review of decapod setal classification

Setae are vital in grooming activities and aiding in the removal of epibionts and sedimentary fouling from the body surfaces of decapod crustaceans. Thus, the setal structures and their arrangement on the grooming appendages and sensory structures of the commercially important shrimp, Macrobrachium rosenbergii, were examined using scanning electron microscopy. Macrobrachium rosenbergii is extensively grown in aquaculture and exhibits unique male morphological forms, termed morphotypes. The three male morphotypes are termed blue‐clawed males, orange‐clawed males, and small‐clawed or undifferentiated males and all three differ in their dominance, behavior, body morphology, and reproductive success. Seven setal types, two of which have never been described in the literature, are identified on the grooming appendages (third maxillipeds, first, second, and fifth pereopods) and antennae: simple, serrate, serrulate, spiniform, pappose, crinoid, and spinulate. The latter two setae are newly identified. Certain setal types, such as serrate and serrulate setae were located and associated with specific grooming appendages such as the first pereopods. The types of setae on the grooming appendages varied among females and male morphotypes and the novel setal types (crinoid and spinulate) were found only on two of the male morphotypes. A literature review of terminology related to the structure of setae and setal types in decapod crustaceans is offered as the usage of various terms is ambiguous and conflicting in the literature. The intention of this review is to provide future authors with a comprehensive collection of terms and images that can be used to describe various aspects of setal morphology in decapods. J. Morphol. 275:634–649, 2014. © 2014 Wiley Periodicals, Inc.     

Molecular phylogeny and diversity of penaeid shrimps (Crustacea: Decapoda) from South-East Asian waters

The decapod family Penaeidae comprises most of the economically important marine shrimp species. Its members are widespread throughout the world, with its highest species diversity centred in the Indo-West Pacific region. Despite this importance, their taxonomy, classification and phylogeny are not yet settled due in part to incongruence among hypotheses proposed from molecular versus morphological studies. In this study, using a thorough taxonomic sampling of especially the South-East Asian species, we aim to (a) utilize a reconstructed phylogeny to test the monophyly of the Penaeidae and its currently recognized genera and (b) explore its species diversity in South-East Asian waters. To infer the phylogeny, a combined gene data set (including 109 ingroup and six outgroup taxa) of mitochondrial genes, COI and 16S rRNA, and two nuclear genes, NaK and PEPCK, was utilized. To explore its diversity, another data set that included 371 COI gene sequences (231 newly generated and 140 retrieved from public sources) was compiled and subsequently analysed with two different tools (ABGD and bPTP) for species delimitation. Other than supporting the non-monophyly of the Penaeidae with the Sicyoniidae nested within the penaeid tribe Trachypenaeini, the genera Penaeus, Mierspenaeopsis and Parapenaeopsis were also revealed to be polyphyletic. Our species delimitation analysis inferred that 94 putative species actually existed within the 71 morphospecies reviewed, indicating an underestimated biodiversity in this family and the potential presence of new species within the following morphospecies: Kishinouyepenaeopsis cornuta, K. incisa, Mierspenaeopsis sculptilis, M hardwicki, Parapenaeopsis coromandelica and Penaeus monodon.     

The feeding mechanisms of Lynceus (Crustacea: Branchiopoda: Laevicaudata), with special reference to L. simiaefacies Harding

Although generally assumed to be filter feeders, branchiopod crustaceans of the laevicaudatan genus Lynceus O.F. Müller, 1776 possess no filters and do not collect food by filtration. Investigated species of these bivalved, multi‐limbed animals have basically benthic habits and collect particulate food, mostly detritus, by scraping or sweeping it from surfaces with suitably armed trunk limbs. L. simiaefacies Harding, 1941, known only from a desert pool in Yemen, has trunk limbs that are armed with particularly robust scrapers and much of the complexity of these limbs and their armature is related to the collection and manipulation of detrital food by mechanical means. Material collected by scrapers borne distally on the more anterior limbs – although the anteriormost is very lightly armed – is swept posteriorly and dorsally, assisted by the armature of the more proximal endites, towards the posterior end of a deep food groove, whence it is passed anteriorly by the substantial gnathobases of the trunk limbs. The necessary movements of the trunk limbs are facilitated by a system of intrinsic muscles that enable individual endites to be moved independently – a remarkable specialized feature of a phyllopodial appendage. Before it enters the food groove, collected material is at all times confined to a narrow median chamber, or cage, between the two sets of opposed trunk limbs that extends over most of the anterior limbs – which are the largest. Each cage wall serves as a screen, covering the limbs of its side and is made up of long setose screening setae that superficially resemble coarse filter setae, and arise from the more proximal endites of most of the anterior trunk limbs. The screens prevent collected material from entering the inter‐limb spaces into which water flows during each cycle of trunk limb movements, where its presence would be disastrous. They do not interfere with the spines of the proximal endites that can protrude between them. The screens do not extend to the extreme posterior end of the trunk limb series where a complex and dense array of specialized spines of the short posterior trunk limbs completes the task of sweeping food material into the food groove. Material is passed anteriorly along the food groove by the trunk limb gnathobases and the small but robustly armed maxillules to the mandibles. Although constructed on the basic, boat‐like, branchiopod plan, in contrast to those of most particle‐feeding branchiopods whose mandibles have a broad masticatory surface, those of Lynceus have a masticatory surface that is narrow and elongate in the antero‐posterior plane. Interestingly, while the number of ‘teeth’ into which this surface is elaborated is few in most species of the genus, inviting comparison with a similar attribute in the Notostraca, L. simiaefacies has more numerous, smaller teeth. Although following the branchiopod plan, the mandibular musculature appears to have its own distinctive features but remains to be investigated in properly fixed material. At its distal extremity the oesophagus is differentiated into a small but complex gizzard, of which there appears to be no parallel in any other branchiopod order. This is described for the first time. Although provided with natatory antennae, species of Lynceus also employ their trunk limbs as organs of propulsion. In L. gracilicornis (Packard, 1871) the carapace valves can gape to more than 90°, which allows the trunk limbs to make a contribution to propulsion in a manner akin to that of the Anostraca. In this respect the Laevicaudata appears to stand in contrast to the Spinicaudata, in most species of which the trunk limbs contribute little or nothing to locomotion. More information is needed on representatives of both orders, which have received little study as living animals. Brief comments are made on the systematic position of the Laevicaudata, about which much remains to be resolved. © 2009 The Natural History Museum. Journal compilation © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 155 , 513–541.     

Antifouling adaptations of marine shrimp (Decapoda: Caridea): gill cleaning mechanisms and grooming of brooded embryos

Gills in the branchial chambers of caridean shrimps, as well as the brooded embryos in females, are subject to fouling by particulate debris and epizoites. Important mechanisms for cleaning the gills are brushing of the gills by the grooming or cleaning chelipeds in some species, while in others, setae from the bases of the thoracic legs brush up among the gills during movement of the limbs (epipodsetobranch complexes). Setae of cleaning chelipeds and of epipod-setobranch complexes show similar ultrastructural adaptions for scraping gill surfaces. Ablation of the cleaning chelipeds of the shrimp Heptacarpus pictus results in severe fouling of the gills in experimentals, while those of controls remain clean. Embryos brooded by female carideans are often brushed and jostled by the grooming chelipeds. In H. pictus , removal of the cleaning chelae results in heavier microbial and sediment fouling than in controls.     

Global diversity of shrimps (Crustacea: Decapoda: Caridea) in freshwater

Freshwater caridean shrimps account for approximately a quarter of all described Caridea, numerically dominated by the Atyidae and Palaemonidae. With the exception of Antarctica, freshwater shrimp are present in all biogeographical regions. However, the Oriental region harbours the majority of species, whilst the Nearctic and western Palaearctic are very species-poor. Many species are important components of subsistence fisheries, whilst the Giant River Prawn forms the basis of an extensive aquaculture industry. A total of 13 species are threatened or endangered, with one species formally extinct. Guest editors: E. V. Balian, C. Lévêque, H. Segers and K. Martens Freshwater Animal Diversity Assessment     

Vitellogenesis in both sexes of gonochoristic mud shrimp, Upogebia major (Crustacea): analyses of vitellogenin gene expression and vitellogenin processing

The mud shrimp, Upogebia major is a gonochoristic species with distinct sexual dimorphism; however, the male has the “ovarian part of testis” in the gonad and mature-looking eggs appear in a similar reproductive cycle to the female. Vitellogenesis of U. major was investigated focusing on the characterization of vitellogenin (Vg) gene expression and Vg processing. Vg cDNA cloned by PCR-based methods was 7799 bp-long, encoding 2568 amino acids in a single open reading frame. The deduced amino acid sequence shared common characteristics conserved in other shrimp Vgs. The Vg gene was expressed in the hepatopancreas of females and males, the ovary, and the ovarian part of testis. Vitellins (Vns) were detected in the gonads of both females and males as three prominent polypeptides with apparent molecular masses of 82 kDa, 100 kDa, and 115 kDa. N-terminal amino acid sequences determined for the three polypeptides were present in the deduced amino acid sequence, demonstrating that they derived from a single long Vg polypeptide. Immunoblot analysis using polyclonal antibodies raised against two Vns (82 kDa and 100 kDa) confirmed Vg processing in the hepatopancreas, in the hemolymph and possibly in the oocytes, similarly in both sexes.     

Development of the female reproductive system in the freshwater crayfish Cherax quadricarinatus (Decapoda, Parastacidae)

Abstract. The differentiation of the female reproductive system from a macroscopic and microscopic point of view was studied in Cherax quadricarinatus. For this characterization, 184 females were dissected and processed for the histological analysis. From the differentiation of the ovary up to its maturity, three ovarian morphotypes could be distinguished macroscopically: parallel strands without any contact between them, an H-shaped ovary, and a Y-shaped ovary. These morphotypes were compared within the Astacida. Four ovarian developmental stages were recognized based on ovary color, and the histological structure and relative proportion of cellular types. The post-spawning ovary was also characterized. The components of the female reproductive system sheath were described and its modifications in the ovary and oviducts were determined and compared. Theoretical aspects of the study of sexual differentiation in C. quadricarinatus were discussed within a phylogenetic framework.     

On the marine sister groups of the freshwater crabs (Crustacea: Decapoda: Brachyura)

Freshwater crab sister group relationships with marine eubrachyuran families were investigated. A morphology-based cladistic analysis was conducted on representatives of the freshwater crab families Deckeniidae, Gecarcinucidae, Parathelphusidae, Potamidae, Potamonautidae, Pseudothelphusidae, and Trichodactylidae using a disparate assemblage of marine heterotreme and thoracotreme brachyurans as possible sister groups. The monophyly of the freshwater crabs sensu lato is falsified. The family Trichodactylidae and the marine portunid subfamily Carcininae form basal groups within the superfamily Portunoidea. The monophyly of the Pseudothelphusidae and the Paleotropical freshwater crab families is supported, and this clade is the sister group of the Thoracotremata (Gecarcinidae, Grapsidae s.l., and Ocypodoidea). The origin, groundplan, and diversification of freshwater crabs are discussed in the context of previously published scenarios of their evolution.     

Mitochondrial phylogenomics reveals insights into taxonomy and evolution of Penaeoidea (Crustacea: Decapoda)

The taxonomy and phylogeny of Penaeoidea have long been fraught with controversy. Here, we carried out the first mitochondrial phylogenomic analysis on all the penaeoid families and tribes, including nine newly sequenced and 14 published mitogenomes, towards elucidating the phylogeny and evolutionary history of Penaeoidea. All these nine mitogenomes exhibit the pancrustacean ground pattern, except that Benthonectes filipes contains two additional clusters of tRNA^Ala, tRNA^Arg and tRNA^Asn and an uncommon noncoding region. The resulted phylogenetic tree is generally well resolved with Benthesicymidae sister to Aristeidae, forming a clade with Solenoceridae. Contrary to traditional classification, this clade has a sister relationship with the tribe Penaeini of the family Penaeidae. The family Sicyoniidae is deeply nested within the penaeid tribe Trachypenaeini which forms a sister clade with the remaining penaeid tribe, Parapenaeini. As the family Penaeidae is recovered to be polyphyletic, the three tribes in Penaeidae are all elevated to familial status. On the other hand, the family Sicyoniidae is retained to accommodate Trachypenaeini because they are now synonyms and the former name is more senior. This work is the first molecular analysis concurring with the latest findings in fossil assessments showing that Parapeaneini is the most primitive in Penaeoidae. Our results also illustrate a shallow‐water origin and an onshore–offshore evolutionary shift in penaeoid shrimps.     

Microscopic anatomy and ultrastructure of the digestive system of three Antarctic shrimps (Crustacea: Decapoda: Caridea)

Mandibles and stomachs of three Antarctic shrimp species (Nematocarcinus lanceopes, Notocrangon antarcticus, and Chorismus antarcticus) were investigated by means of scanning electron microscopy. Transmission electron microscopy of the midgut glands was applied to find out the nutritional status of the animals, which contained a broad variety of food items in their stomachs. In contrast to the Antarctic krill, the three carideans possess a dual filter system; primary filters in the cardia and secondary filters in the pyloric chamber. Morphologically, the mandibles and stomachs of the three species vary considerably; however, their food items are similar. We conclude that stomach contents do not really reflect the different modes of life or habitat preferences of the investigated species.     

External morphology of the burrowing barnacle shape Lithoglyptes bicornis (Crustacea: Cirripedia: Acrothoracica)

The external morphology of female and male Lithoglyptes bicornis was examined under SEM. The structure of the mantle, the thorax and, especially, the trophi were thoroughly examined. The data on the mantle and the thorax structures were compared with the previous data on the acrothoracican ultrastructure. The data on the structure and the character of trophi setation allow to speculate about a relationship with other cirripede taxa.     

Comparative studies of the branchial morphology, gill area and gill ultrastructure of some thalassinidean mud-shrimps (Crustacea: Decapoda: Thalassinidea)

The morphology, gill area and branchial formulae of six thalassinidean decapods ( Calocaris macandreae, Jaxea nocturna, Callianassa subterranea, Upogebia stellata, U. deltaura and U. pusilla ) are reported. Additionally, the rarely-encountered Axius stirhynchus receives brief attention. Gill formulae are presented; the simplest arrangements are found in the Callianassidae and Upogebiidae. The deeper-burrowing, deposit-feeding species that are regularly exposed to prolonged periods of hypoxia, i.e. Callianassa subterranea and Jaxea nocturna , had significantly larger gill areas than thalassinideans that occupied more oxygenated burrows ( Upogebia spp., Calocaris macandreae ). The increase in gill area was a result of flattening of the trichobranchiate gill filaments giving rise to a phylloid gill form. It is suggested that the efficiency of gas transfer, and hence diffusing capacity, was enhanced in the phylloid gill by the larger gill area and, because of the reduced cuticle thickness, by the shorter water-haemolymph diffusion distance. The increased diffusion capacity of the phylloid gill is interpreted as a functional adaptation to the more severe physicochemical burrow water conditions experienced by Callianassa subterranea and Jaxea nocturna .     

Sperm ultrastructure of shrimps from the family Penaeidae (Crustacea: Dendrobranchiata) in a phylogenetic context

We describe the sperm ultrastructure of six penaeid species, including at least one member of each tribe (Penaeini, Parapenaeini and Trachypenaeini). Fragments of the vas deferens of the Penaeidae Farfantepenaeus brasiliensis, Farfantepenaeus paulensis, Litopenaeus schmitti, Parapenaeus americanus, Rimapenaeus constrictus and Xiphopenaeus kroyeri were fixed and processed according to the routine for transmission electron microscopy. The morphological results were contextualized in an evolutionary perspective using molecular markers for the phylogenetic reconstruction of this group. A phylogram was proposed by Bayesian inference based on 1007 bp of 33 sequences of the combined genes (16S rDNA and COI mtDNA) from 27 dendrobranchiate specimens. Our findings show that morphological differences in the sperm ultrastructures of members among the tribes of Penaeidae can be used as a baseline to understand their evolutionary relationships. Individuals from the Penaeini tribe show plesiomorphic characteristics in the sperm ultrastructure compared to the Trachypenaeini tribe from which they were derived, such as shrimp from family Sicyoniidae. The morphological complexity of the sperm of the different penaeid members corroborated with the genetic phylogeny, which showed different clades for each tribe and the close relationship with Sicyoniidae. The sperm features of the selected species studied here reflected their evolutionary history. These features confirm the previous phylogenetic hypothesis and question the monophyly of Penaeidae, which should be verified in the future with a more complete set of representative members of each tribe.     

Studies on the salinity and desiccation tolerances of Helice tridens and Helice japonica (Decapoda: Grapsidae)

In the Shigenobu River Estuary (33 ° 48′ 18″ N, 132 ° 41′ 10″ E), Matsuyama (Japan), Helice tridens inhabits the mid-intertidal zone to the limit of the high tide, while H. japonica is found around the mid-intertidal zone. In addition, H. japonica is distributed further downstream than H. tridens. These differences suggest that H. japonica has a lower salinity and desiccation tolerance than H. tridens. Laboratory experiments on salinity tolerance confirmed the higher tolerance of H. tridens compared to H. japonica. Helice tridens survived at least a week under fresh water conditions, whereas most of the H. japonica died. Helice tridens was shown to be more able to tolerate desiccation than H. japonica, through behavioral, not physiological, adaptation to dry conditions. The present results demonstrate a stronger adaptation of H. tridens to semi-terrestrial and/or freshwater environments than H. japonica. This revised version was published online in July 2006 with corrections to the Cover Date.     

Phylogeny of penaeoid shrimps (Decapoda: Penaeoidea) inferred from nuclear protein-coding genes

Penaeoidea is a diverse group of economically important marine shrimps. Attention to the evolutionary history of the penaeoids has been raised since studies using mitochondrial DNA markers and sperm ultrastructure contradict classification of the penaeoid families based on morphology and hence challenge the long standing taxonomy of this superfamily. In this study, DNA sequences of two nuclear protein-coding genes, phosphoenolpyruvate carboxykinase and sodium–potassium ATPase α-subunit, were determined from 37 penaeoid genera to reconstruct the evolutionary relationships and to estimate divergence ages of the penaeoid shrimps. Phylogenetic analyses using maximum likelihood and Bayesian approaches strongly support the monophyly of Solenoceridae, Aristeidae and Benthesicymidae, but find Sicyoniidae nested within Penaeidae, making this family paraphyletic. Penaeoidea comprises two lineages: the former three families in one while the latter two in another. The diversification of these lineages may be related to bathymetry. The penaeid-like lineage diversified in the Triassic, earlier than the aristeid-like lineage with an origin in the Jurassic. Taxonomic revisions within Penaeoidea are also proposed for further investigation. Due to the paraphyly of Penaeidae and the high genetic divergence among the three penaeid tribes of Burkenroad [Burkenroad, M.D., 1983. Natural classification of Dendrobranchiata, with a key to recent genera. In: Schram, F.R. (Ed.), Crustacean Issues I. Crustacean Phylogeny. A.A. Balkema, Rotterdam, pp. 279–290], these tribes should be treated as having the same taxonomic rank as Sicyoniidae, while the family ranking of Benthesicymidae has to be re-considered owing to the low genetic divergence between the benthesicymids and the aristeids.     

Austinogebia, a new genus in the Upogebiidae and rediagnosis of its close relative, Gebiacantha Ngoc-Ho, 1989 (Crustacea: Decapoda: Thalassinidea)

New material described recently permits the separation of six upogebiid species into the new genus Austinogebia, for which the diagnostic characters and a key are presented. The new taxon is compared to its close relative, Gebiacantha Ngoc-Ho, 1989, and the opportunity is taken to rediagnose the latter.     

The functional anatomy of the foregut of Porcetlana platychetes and a comparison with Galathea squamifera and Upogebia deltaura (Crustacea: Decapoda)

Muscles, ossicles and internal structures of the foregut of Porcellana platycheles are described and figured. The function of the foregut is deduced from the distribution of food particle size within its chambers. The trough of the cardio-pyloric valve is considered to be the main site of digestion and the supra-ampullary valve to have an active role in the formation of the ventral cap of faecal pellets.
The structures and function of the foregut of Galathea squamifera are similar to those of P. platycheles. Certain differences found in the foregut of Upogebia deltaura may be related to the small size of food particles ingested and the absence of a ventral cap from faecal pellets may be due to the supra-ampullary valve having no action on surrounding particles.     

Setal morphology and cirral setation of thoracican barnacle cirri: adaptations and implications for thoracican evolution

Thoracic cirripedes are sessile crustaceans that use six pairs of thoracic appendages (the cirri) to catch and handle food. We used scanning electron microscopy to examine the cirri, which include one to three pairs of maxillipeds in six species of thoracican barnacles, in search of correlations between cirral setation and feeding mode. The species studied comprise both pedunculate and sessile forms and represent a wide range of marine habitats as well as morphologies, viz., Ibla cumingi , Octolasmis warwickii , Capitulum mitella , Pollicipes polymerus , Tetraclita japonica japonica and Megabalanus volcano . Of the pedunculates, I. cumingi has the least complex setation pattern consisting of only serrulate types. This is consistent with its very simplified feeding mode and an apparent inability to discriminate between food items. Octolasmis warwickii is slightly more modified, while both P. polymerus and C. mitella have a more diversified setation. The balanomorphan species exhibit by far the most complex cirral setation. This is consistent with the several types of suspension feeding seen in these species, their ability to identify and sort captured food items and even to perform microfiltration in the mantle cavity using the setae on their three pairs of maxillipeds. Our results indicate that in thoracican barnacles, adaptations in feeding behaviour are associated with changes in the setation pattern of the cirri. In addition, the setal types and their distribution on the cirri are potential new characters in future morphology-based analyses of the phylogeny of the Cirripedia Thoracica.