长白山森林土壤真菌区系研究

本研究对长白山自然保护区不同海拔、林型、土壤剖面的森林土壤真菌进行分离鉴定,从而为建立森林真菌资源库提供种质资源,并为森林生物资源管理提供科学依据。在该地区6个不同林型中,采用“之”形路线及土壤剖面取样法多点采集土壤样品,按照标准方法初步分离鉴定出真菌28个属,其中包括1个中国新纪录属,即球壳属(Sphaerodes)。研究结果表明,土壤真菌区系与森林(植被)类型、土壤剖面层次密切相关:美人松落叶松林、红松阔叶林和红松云冷杉林土壤真菌的种类明显多于鱼鳞云冷杉林、岳桦林和高山苔原带;土壤不同剖面层次上的真菌种群数量高低依次为落叶层>腐殖质层>土壤层;同一林型下不同土壤层面上优势菌属的组成也具有一定的差异,且不同层面上也存在着其特有的优势菌属。     

The cellular slime mold guild and its bacterial prey: growth rate variation at the inter- and intraspecific levels

Summary A guild of cellular slime molds (CSM) consisting of two isolates from each of five species, representing two genera, and obtained from the same square meter of forest soil exhibited extensive growth rate variation when tested on a suite of 18 bacteria isolated from the same soil. Significant growth rate differences were found at each taxonomic level examined: among species of different genera, between genera, among species within genera, and between isolates (=clones) within species. The type of bacteria used as prey determined the relative rank of the growth rates in different CSM isolates, as well as the taxonomic level at which significant differences were found. We suggest a possible reconciliation between a previous hypothesis, based on competition, and contradictory experimental work on resource partitioning in this guild of bacterial predators. Our results raise a question about the efficacy of using single genotypes to represent a species when ecological ideas are developed through laboratory investigations.     

沙坡头地区沙冬青AM真菌的时空分布

2007年5月、8月和10月分别从宁夏沙坡头地区豆科植物沙冬青(Ammopiptanthus mongolicus)根围分0-10cm,10-20cm,20-30cm,30-40cm和40-50cm5个土层采集土壤样品。研究了AM真菌时空分布及与土壤因子的相关性,在分离的3属12种AM真菌中,球囊霉属(Glomus)6种,无梗囊霉属(Acaulospora)4种,盾巨孢囊霉属(Scutellospora)2种,3属12种AM真菌在3个时期均有分布。AM真菌定殖率与孢子密度有明显的时空分布规律,并与土壤因子关系密切。孢子密度和泡囊定殖率在8月份最高,丛枝、菌丝和总定殖率10月份最高。土壤采样深度对孢子密度和定殖率有显著影响,AM真菌最高定殖率和最大孢子密度均出现在0-30cm浅土层。孢子密度与土壤有机质、碱解N极显著正相关,与pH显著正相关;菌丝、总定殖率与pH、碱解N和速效P极显著正相关。在评估荒漠生态系统和沙冬青形成菌根的能力时,AM真菌孢子密度、菌根不同结构的定殖程度是十分有用的指标。     

元江流域干热河谷灌草丛土壤种子库与地上植物群落的物种组成比较

土壤种子库与地上植被之间的关系和相似性是长期争议的群落生态学问题之一。本研究旨在通过比较元江流域干热河谷典型灌草丛群落与其土壤种子库的物种组成, 探讨土壤种子库与地上植物群落存在怎样的相似性关系。在元江干热河谷上、中、下游选取典型灌草丛群落, 采用典型样地调查法进行植物群落调查, 同时在样方内采集0-5 cm、5-10 cm、10-15 cm三层土壤样品, 采用萌发实验研究土壤种子库的种子数量和物种组成, 并与地上植物群落进行比较。结果表明: (1)全部调查样方的地上植被中共包含种子植物76种, 隶属于25科64属, 主要集中在豆科、禾本科、菊科、大戟科, 群落物种组成以多年生草本为主、灌木为辅; (2)土壤种子库中共发现33种植物, 隶属于14科32属, 以旱生型禾本科、豆科、菊科物种为主; (3)土壤种子库中的植物种子密度在表层土壤中最高, 随着土层的加深而递减; (4)各样方的土壤种子库与地上群落共有物种数较少, 相似性较低; 土壤种子库密度与地上群落的种群密度没有显著的相关性。总体而言, 本研究发现元江流域干热河谷典型灌草丛群落其土壤种子库与地上群落之间没有显著的相关性, 并且地上群落和土壤种子库都有外来入侵种类。     

我国北方VA菌根真菌某些属和种的生态分布

虽然VA真菌遍布全球,但其属和种的分布是不均衡的,常有程度不同的地域性。以新疆、北京和吉林三地为代表的我国北方土壤中的VA真菌大都为球囊霉属Glomns。对摩西球囊霉G.mosseae、地表球囊霉G.versilorme及未发表种Glomus sp.9等菌种和某些生态因子的统计分析表明:土壤pH、土壤有机质含量和采集地海拔高度对三菌种的分布影响显著。在pH5—9.5范围内,球囊霉属所占比例随土壤pH增高而加大;无梗囊霉属Acaulospora所占比例则随土壤pH降低而加大。pH大于9的土壤中完全没有盾巨囊霉属Scutellospora。虽然球囊霉属主要分布在有机质含量低的土壤中,但其未发表种Glomus sp.9却较多发现于有机质丰富处。无梗囊霉属的某些种对土壤有机质含量在一定选择性。盾巨囊霉属多见于有机质含量为5—10％的土壤中。海拔3000米以上土壤中球囊霉属和无梗囊霉属显著减少,盾巨囊霉属则已绝迹。球囊霉属中某些种对海拔高度较敏感。摩西球囊霉是我国北方土壤中的常见种,也是北京污灌土壤中的优势种。由于对环境的适应能力及地域性的差异,将VA真菌总结为“广谱生态型”和“窄谱生态型”两类。     

Species richness of soil gamasid mites (Acari: Mesostigmata) in fire-damaged mountain sites

Gamasid mites are important regulators of soil food webs in forest ecosystems. Wildfire is a dominant disturbance factor in forest ecosystems. We assessed the impact of fire on the species composition of soil gamasid mites at mountain sites following fires of four different degrees of severity and at one control site (5 years post-fire). In total, 14 families, 28 genera, and 54 species or species complexes were found. The abundance and richness were poor in severely burned sites compared to the less damaged sites. The different species compositions, especially in the medium-burned site, require further ecological study to improve our understanding. The fire response and recovery processes of selected species are also discussed.     

元阳梯田地方水稻品种根部内生菌及根际微生物的分离与鉴定

采用组织分离法和土壤稀释涂板法,对元阳哈尼梯田2个地方品种‘月亮谷’和‘红脚老粳’的根部内生细菌及根际土壤细菌进行了分离,研究元阳梯田传统水稻品种特殊的内生菌组成.结果表明: 试验共得到399个菌株.经形态特征及生理生化鉴定,月亮谷根部和其根际土壤分别分离到8和5个属,其中5个属是共有的;红脚老粳的根部和其根际土壤中分别分离到10和7个属,其中6个属是共有的.经分子生物学鉴定,月亮谷根部分离到11个种和5个属,根际土壤分离到8个种和4个属,其中5个种和4个属是共有的;红脚老粳根部分离到9个种和5个属,根际土壤分离到10个种和3个属,其中4个种和2个属是共有的.通过分子生物学鉴定,大部分菌株都可以鉴定到种,而通过形态及生理生化特性只能初步鉴定到属,但两种方法在属层次上的鉴定结果基本一致.元阳地方水稻根部内生细菌及根际土壤细菌具有一定的种属同源性与特异性.     

Vertical Divergence of Cultured Microfungal Communities Through the Depth in Different Soil Formations at Nahal Nizzana,Western Negev Desert,Israel

We examined the depth-wise distribution of microfungi through 0–50-cm crusted sandy and playa profiles at the Nizzana research site, the Negev desert, Israel. A total of 188 species from 77 genera was isolated using the soil dilution plate method. Density of microfungal isolates sharply decreased with depth highly positively correlating with organic matter content at the sandy profiles. High load of solar radiation (at the surface) as well as strongly limited aeration, water infiltration, and increased salinity (at the playa depth) led to dominance of melanin-containing species with large, multicellular conidia both in the topsoil of all profiles and in the deep playa layers, while at 1–30 cm, species producing light-colored small one-celled conidia mostly prevailed. In that way, the above vertical variations resemble differences in the composition of topsoil microfungal communities found between the sites located in the Negev desert and in the Mediterranean region of Israel.     

Nematodes from river drift and surface drinking water supplies in southern Ontario

Sixty-six genera of nematodes representing 37 families were collected over a 13-month period from untreated and treated water from three water treatment plants in southern Ontario. Two plants receive water from the Grand River which drains agricultural, residential and industrial regions, the third from a small stream in an agricultural district. Specimens were isolated by filtration from weekly samples of untreated and treated water, most were identified to genus but a few to species.Estimated mean density in the organic drift of the river ranged from 0.58 individuals per litre in winter, when it was under ice, to 10.57 per litre during the spring thaw. Most of the 66 genera found passed through the treatment plants and over 50% of these were still motile.Eleven genera were abundant at some time of the year, six known only from soil-dwelling forms and five from aquatic or soil/aquatic species. There was no indication that sewage purification works were a major source of any genus. There were a few plant parasites.Aquatic nematodes occurred during most of the year although they were more abundant during the warmer months, high densities of soil nematodes were a feature of the spring thaw and rains and during heavy autumn rains. More than 50% of the specimens were juveniles and some common genera lacked males.     

潮棕壤线虫群落对土地利用方式的响应

作者对潮棕壤不同土地利用方式(旱田、撂荒地和林地)下土壤线虫群落时空分布特征进行了研究, 结果表明, 不同土地利用方式能够影响线虫群落及其优势属的时空分布。线虫优势属对不同土地利用方式的响应不同, 撂荒地和林地处理中板唇属(Chiloplacus)线虫主要分布在5–30 cm土层, 而其他线虫优势属则主要分布在0–20 cm土层; 在旱田处理中, 短体属(Pratylenchus)线虫均匀分布在各个土层。由于土地利用方式的改变而引起的土壤环境因素的变化能够对土壤线虫产生影响, 研究发现土壤孔隙度、土壤有机碳、全氮和碳氮比与土壤线虫优势属的数量具有显著的正相关关系。线虫区系分析结果表明, 撂荒地和林地处理中土壤环境相对稳定, 土壤食物网向较成熟的阶段演替。线虫区系分析方法可用来揭示不同土地利用方式下土壤食物网的变化, 为进一步研究土壤生态过程对土地利用方式的响应提供了有效的工具。     

连作苹果园土壤真菌的T-RFLP分析

为探讨连作苹果园不同土壤空间真菌群落结构,应用T-RFLP(Terminal Restriction Fragment Length Polymorphism)技术,比较了3个连作园不同取样位置(行间、原穴、株间)和不同土层(0—30 cm、30—60 cm)的土壤真菌多样性,并结合不同样品TRFLP图谱的差异,采用多样性指数分析、聚类分析和主成分分析(PCA),分析了3个连作园土壤真菌群落结构特征。结果表明,磁窑、道朗和金城连作园的土壤真菌多样性存在差异,各采样地区的Shannon多样性指数在0.43—2.47之间,Pielou均匀度指数在0.17—0.85之间,Simpson优势度指数在0.12—0.81之间,Margalef丰富度指数最高的是金城树穴0—30 cm土层(R=4.55),最低的是磁窑行间30—60 cm土层(R=0.77)。在调查的不同取样位置、不同土层中,原树穴具有最高的多样性指数、均匀度指数、丰富度指数和最低的优势度指数;0—30 cm土层的土壤真菌多样性指数、均匀度指数、丰富度指数均高于30—60cm土层,而优势度指数的趋势正好相反;PCA和聚类分析结果显示磁窑、道朗和金城连作园的土壤真菌群落结构均有明显差异,3个连作园的土壤真菌各自构成一个独立的群落结构,这些群落能够适应各自的土壤环境并成为环境的优势群落。     

Seasonal variation and distribution of microfungi in forest soils of Delhi

Seasonal occurrence and abundance of microfungi at three different depths in tropical forest soils of Delhi were studied using the soil dilution and soil plate techniques. Surface layer in all the soil types exhibited the highest population and species number which gradually declined with depth increase. In total, 58 genera comprising 118 species were isolated of which theDeuteromycetes was represented by 38 genera and 90 species, thePhycomycetes by 10 genera and 18 species, theAscomycetes by 6 genera and 8 species, and theBasidiomycetes andMyxomycetes by single genus and species. Besides the surface vegetation, the edaphic and environmental factors had a profound influence on the occurrence and distribution of microfungi at various depths of soils.     

武夷山自然保护区土壤可培养芽胞杆菌 的物种多样性及分布

为了解武夷山自然保护区土壤中可培养芽胞杆菌的分布状况, 2012年6月从该保护区的黄岗山顶部、中部、底部和桐木关、挂墩、大竹岚等6个地点采集土样75份。用80℃水浴加热、稀释平板法进行芽胞杆菌的分离, 并根据16S rRNA基因序列分析对菌株进行初步鉴定。从土样中分离出芽胞杆菌418株, 鉴定为8个属42个种, 其中Bacillus属的种数最多, 有20种, Paenibacillus属和Lysinibacillus属分别有8种和7种。不同地点分离到的芽胞杆菌在种类、数量上存在差异: 从大竹岚土壤中分离到的芽胞杆菌种类最多, 从黄岗山中部和底部分离到的种类数则较少; 挂墩、大竹岚土壤中芽胞杆菌的数量较大, 达3.6×10⁶ cfu/g以上, 而黄岗山顶部和中部土壤中的数量则少于4.9×10⁵ cfu/g。Bacillus cereus、B. mycoides、B. thuringiensis和Lysinibacillus xylanilyticus等4个种在6个地点的土样中均有分离到, 其中B. thuringiensis、L. xylanilyticus是该保护区土壤中的优势种。桐木关土壤中芽胞杆菌的种类多样性和均匀度指数都比其他5个地点的高, 而挂墩土壤中芽胞杆菌的Shannon-Wiener多样性、均匀度和优势度指数都最低。B. mycoides和B. thuringiensis的数量与海拔显著相关, 相关系数分别为0.852和-0.834, B. cereus、B. mycoides、B. thuringiensis的分离频度与海拔的相关性极显著, 相关系数分别为0.960、0.952和-0.931。研究结果表明, 武夷山自然保护区土壤中可培养芽胞杆菌的种类丰富、数量较大, 具有较高的多样性。     

Fungal root endophytes from natural vegetation in Mediterranean environments with special reference to Fusarium spp

Surveys (in 2002 and 2003) were performed for fungal endophytes in roots of 24 plant species growing at 12 sites (coastal and inland soils, both sandy soils and salt marshes) under either water or salt stress in the Alicante province (Southeast Spain). All plant species examined were colonized by endophytic fungi. A total of 1830 fungal isolates were obtained and identified by morphological and molecular [internal transcribed spacer (ITS) and translation elongation factor-1alpha gene region (TEF-1alpha) sequencing] techniques. One hundred and forty-two fungal species were identified, belonging to 57 genera. Sterile mycelia were assigned to 177 morphospecies. Fusarium and Phoma species were the most frequent genera, followed by Aspergillus, Alternaria and Acremonium. Fungal root endophytic communities were influenced by the soil type where their respective host plants grew, but not by location (coastal or inland sites). Fusarium oxysporum, Aspergillus fumigatus and Alternaria chlamydospora contributed most to the differences found between endophytic communities from sandy and saline soils. Host preference was found for three Fusarium species studied. Fusarium oxysporum and Fusarium solani were especially isolated from plants of the family Leguminosae, while Fusarium equiseti showed a preference for Lygeum spartum (Gramineae). In some cases, specificity could be related to intra-specific variability as shown by sequencing of the TEF-1alpha in the genus Fusarium.     

Allocasuarina tree hosts determine the spatial distribution of hypogeous fungal sporocarps in three tropical Australian sclerophyll forests

Across three tropical Australian sclerophyll forest types, site-specific environmental variables could explain the distribution of both quantity (abundance and biomass) and richness (genus and species) of hypogeous fungi sporocarps. Quantity was significantly higher in the Allocasuarina forest sites that had high soil nitrogen but low phosphorous. Three genera of hypogeous fungi were found exclusively in Allocasuarina forest sites including Gummiglobus, Labyrinthomyces and Octaviania, as were some species of Castoreum, Chondrogaster, Endogone, Hysterangium and Russula. However, the forest types did not all group according to site-scale variables and subsequently the taxonomic assemblages were not significantly different between the three forest types. At site scale, significant negative relationships were found between phosphorous concentration and the quantity of hypogeous fungi sporocarps. Using a multivariate information theoretic approach, there were other more plausible models to explain the patterns of sporocarp richness. Both the mean number of fungal genera and species increased with the number of Allocasuarina stems, at the same time decreasing with the number of Eucalyptus stems. The optimal conditions for promoting hypogeous fungi sporocarp quantity and sporocarp richness appear to be related to the presence and abundance of Allocasuarina (Casuarinaceae) host trees. Allocasuarina tree species may have a higher host receptivity for ectomycorrhizal hypogeous fungi species that provide an important food resource for Australian mycophagous animals.     

Isolation and identification of Rhizoctonia-like fungi from roots of three orchid genera, Paphiopedilum, Dendrobium, and Cymbidium, collected in Chiang Rai and Chiang Mai provinces of Thailand

Three orchid genera, Paphiopedilum, Cymbidium, and Dendrobium, are among the most heavily traded ornamental plants in Thailand. In this study, 27 isolates of Rhizoctonia-like fungi were isolated from root sections of mature orchids in the three orchid genera, collected from diverse horticultural settings in Chiang Mai and Chiang Rai provinces of Thailand. Fungal identification was done by the morphological characterization, the comparison of the internal transcribed spacer and 5.8S ribosomal DNA sequences, and the phylogenetic analysis. Epulorhiza repens was found to be the most common species found in the roots of various species of all three orchid genera, whereas Epulorhiza calendulina-like isolates were strictly found in the roots of Paphiopedilum species. We have also isolated and described an anamorph of Tulasnella irregularis, four new anamorphic species in the genus Tulasnella, and a new anamorphic species in the family Tulasnellaceae. Our study provides information on diversity of root-associated fungi of the orchid genera and at the sampling sites that were rarely addressed in the previous studies.     

土壤纤毛虫群落对退牧还草生态恢复的响应——以玛曲县为例

为研究退牧还草对土壤纤毛虫群落特征的影响、退牧还草后土壤环境变化以及如何利用原生动物纤毛虫群落特征来评价退还效果的可行性,于2015年5月至2016年3月在甘肃省甘南藏族自治州玛曲县选取3个不同恢复年限的草地样点和1个未经过退牧还草对照样点,采用"非淹没培养皿法"、活体观察法和培养直接计数法对土壤纤毛虫的物种数和密度进行测定,同时测定了土壤温度、pH值、含水量、土壤孔隙度、速效钾、速效氮、速效磷、全氮、全钾、全磷和有机质含量,并分析了在生态逐渐恢复条件下,土壤纤毛虫群落特征与土壤环境因子间的相关性。研究共鉴定到纤毛虫95种,隶属9纲15目21科28属。研究发现,退牧还草样地与未退牧还草样地的土壤纤毛虫的物种分布存在明显差异:退牧还草后的3个样点间的物种相似性减小,群落组成复杂化,纤毛虫丰度、丰富度指数、均匀度指数和物种多样性指数增高。相关性分析结果表明,退牧还草后,对纤毛虫群落结构稳定性影响最主要的是土壤有机质、含水量和土壤全氮、全磷和全钾的含量,不同恢复年限样点的土壤纤毛虫群落组成差异较大。土壤纤毛虫群落对退牧还草生态恢复过程中土壤环境条件的变化有较好的响应。     

AM Fungal Diversity in Selected Medicinal Plants of Kanyakumari District,Tamil Nadu,India

The association of Arbuscular Mycorrhizal Fungi (AMF) with three medicinally important plants viz., Eclipta prostrata, Indigofera aspalathoides, I. tinctoria collected from three different localities of Kanyakumari District, South India was examined. The study reports the colonization percentage, diversity and species richness of different AM fungi in the rhizosphere of the three medicinal plants and discusses the impact of soil physicochemical characteristics such as soil texture, pH and available macro- and micro nutrient content on AM fungal communities. A total 21 AM fungal species were identified in field conditions of the three plants from three sites. AM fungal species richness, colorization percentage and Shannon index were found to be high in the two Indigofera sp. growing in the hilly areas of Kanyakumari District and were low in E. prostrata collected from the damp regions in the foothills of the three study sites. Five species registered 100% frequency in all the study sites of the three medicinally important plants with Glomus as the dominant genera. The study states that the mean colonization and diversity patterns were dependant on edaphic factors and type of vegetation.     

Termites as bioindicators of habitat quality in the caatinga, Brazil: is there agreement between structural habitat variables and the sampled assemblages?

The composition of termite assemblages was analyzed in three caatinga sites of the Esta??o Ecológica do Seridó, located in the municipality of Serra Negra do Norte, in the state of Rio Grande do Norte, Brazil. These sites have been subjected to selective logging, and cleared for pasture and farming. A standardized sampling protocol for termite assemblages (30h/person/site) was conducted between September 2007 and February 2009. At each site we measured environmental variables, such as soil pH and organic matter, necromass stock, vegetation height, stem diameter at ankle height (DAH) and the largest and the smallest crown width. Ten species of termites, belonging to eight genera and three families, were found at the three experimental sites. Four feeding groups were sampled: wood-feeders, soil-feeders, wood-soil interface feeders and leaf-feeders. The wood-feeders were dominant in number of species and number of encounters at all sites. In general, the sites were not significantly different in relation to the environmental variables measured. The same pattern was observed for termite assemblages, where no significant differences in species richness, relative abundance and taxonomic and functional composition were observed between the three sites. The agreement between composition of assemblages and environmental variables reinforces the potential of termites as biological indicators of habitat quality.     

Unraveling the extent of diversity within the order Planctomycetales.

The phylogenetic positions of 22 isolates that morphologically resemble members of the family Planctomycetaceae were determined by sequence analysis of genes coding for 16S rRNA. While nine and eight isolates could be assigned to the genera Planctomyces and Pirellula, respectively, three strains grouped near Isosphaera pallida and one strain was closely related to Gemmata obscuriglobus. No isolate was found to be related to a previously described species of any of the four genera at the species level. Morphological characters and sequence idiosyncrasies of genes coding for 16S rRNA of the isolates generally correlated with features described for the four genera to which the isolates could be assigned. One strain stands phylogenetically isolated and may be representative of a novel genus of the family. Comparison with environmental clone sequences representing planctomycetes in soil and water revealed that three of the novel isolates were related to one clone of soil origin, but no close relationships between clones and the other new strains were found. The study reveals that the biodiversity of planctomycetes is significantly greater than was previously determined.