不同亲子鉴定试剂盒对D7S820基因座稀有等位基因检测结果比较

目的：观察分析用不同亲子鉴定试剂盒对D7S820基因座稀有等位基因检测结果的差异。方法：280名不同个体的血样DNA提取和基因型检测,按中华人民共和国公共安全行业标准GA／T382—2002和GA／T383—2002进行;分别用Identifiler试剂盒（美国AB公司）、PowerPlex 18Dsystem试剂盒（美国普洛麦格公司）、GoldeneyeTM20A试剂盒（北京基点认知技术有限公司）,经PCR复合扩增STR基因座,用AB公司DNA序列分析仪电泳分离扩增产物和激光扫描分析。结果：检测到280名不同个体的常用常染色体STR基因座的等位基因。,其中六份样本在D7S820基因座上,Identifiler试剂盒检测的基因型与PowerPlex 18D—system和GoldeneyeTM20A试剂盒检测的基因型结果有差异。结论：不同厂家生产的试剂盒检测常用常染色体D7S820基因座的稀有等位基因存在有一定误差。     

广州汉族人群D12S391和D11S554基因座序列变异

为研究高度变异的sTR基因座核心序列结构,对广州汉族人群突变率较高的D12S391和D11S554基因座等位基因进行了序列分析。结果显示D12S391基因座核心序列结构为(AGAT)8～17(AGAC)6～10(AGAT)0～1,其较小片段等位基因(15～18)仅表现为第1个重复单位(AGAT)数目的变异,而较大片段等位基因(19～27),可表现为第2或第3个重复单位数目的变异。发现有4种新的等位基因,分别命名为22″、23″、24′″和27。D11S554基因座核心序列结构更复杂,有5种核心序列,其中3种具有相同的基本结构(AAAGG)(AAAG)4(AAAGG)2～3,(AAAG)13～19。其大片段等位基因(219～249)核心序列结构中,既有四核苷酸重复,还有五核苷酸重复,以及单个硷基的变异、硷基插入或缺失。两基因座均存在序列异质性。结果表明D12S391和D11S554基因座属复杂重复类型,为其准确分型增加了难度,首先需建立相应群体的等位基因分型标准物。     

甘肃藏族人群3个STR基因座的遗传多态性

通过D16S539、D7S820和D13S217 3个STR基因座合扩增,采用高分辨率的聚丙烯酰胺变性测序胶电泳分离,银染检测,对129名无关甘肃藏族个体进行遗传多态性研究。所有基因座经检验均符合Hardy-Weinberg平衡。在藏族人群中,观察杂合率分别是73.3%、81.4%和80.6％;PIC值分别是0.84、0.80和0.83;联合识别率是0.9999,联合亲子关系指数是7.09。结果显示该复合扩增体系在藏族人群中等位基因分布较好,适于法医个体识别及遗传学、人类学相关研究,所得数据与以前报道的汉族数据相比较,除D16S539基因座外,未发现显著差异性。     

脐血流S／D比值异常108例临床分析

目的：应用胎儿脐血流检测仪测定脐动脉S／D值探讨导致脐血流S／D比值升高的主要原因。方法：对2009年9月-2010年12月在我院进行产前检查的1919例孕28-42周的孕妇检测胎儿脐动脉血流（S／D）。结果：异常组108例的脐带因素、胎儿窘迫、羊水过少及妊高征的发生率均明显高于正常组,两者比较差异有显著性（P〈0．0S）。结论：脐动脉S／D比值增高可及早地警示和发现胎儿宫内缺氧情况,指导临床提早采取干预和处理措施,提高围产保健质量。     

脐血流S/D 比值异常108 例临床分析

目的:应用胎儿脐血流检测仪测定脐动脉S/D值探讨导致脐血流S/D比值升高的主要原因。方法:对2009年9月~2010年12月在我院进行产前检查的1919例孕28~42周的孕妇检测胎儿脐动脉血流(S/D)。结果:异常组108例的脐带因素、胎儿窘迫、羊水过少及妊高征的发生率均明显高于正常组,两者比较差异有显著性(P<0.05)。结论:脐动脉S/D比值增高可及早地警示和发现胎儿宫内缺氧情况,指导临床提早采取干预和处理措施,提高围产保健质量。     

中国畲族群体D17S30位点遗传多态性研究

采用聚合酶链反应 (PCR)技术对中国畲族群体270名无关个体D17S30位点的VNTR进行了研究,共检出12个等位基因,片段大小为168bp-1008bp,基因频率为0.0056-0.3259,杂合度为79.10%,父权排除率为0.4358。家系分析表明,扩增片段按孟德尔方式遗传。统计学分析证明,本资料符合Hardy-W einberg平衡定律(x2=79.97,v=66,P=0.1158>0.05)。 Abstract:The variable number of tandem repeat(VNTR)of D17S30 locus in 270 unrelated individuals of She ethnic group was studied by polymerase chain reaction(PCR).The results showed that 12 alleles were detected and their sizes ranged from 168bp to 1 008bp.The allele frequencies were 0.0056~0.3259,the heterozygosity of this locus was 79.10% and the paternity exclusion probability was 0.4358.The number of D17S30 VNTR allele and allele frequency of She were different from those of Han ethnic group in Mendelian Law.Statistical analysis demonstrated that their geneotypes were consistent with Hardy-Weinberg equilibrium(x2=79.97,v=66,P=0.1158>0.05).     

26S rDNA单链构象多态性分析在临床酵母菌菌种鉴定中的应用

摘要： 【目的】探讨酵母菌临床分离株26S rDNA D1/D2区序列种内相似性和种间差异性的快速检测方法,为临床酵母菌菌种鉴定方法的改进奠定基础。调查北京地区临床酵母菌的种群多样性,为国内酵母菌感染的流行病学研究提供新的基础数据。【方法】用5种常见临床酵母菌种的模式和权威菌株作为标准参考菌株,从北京四家综合性医院收集临床酵母菌260余株,PCR扩增其26S rDNA D1/D2区,对扩增产物进行单链构象多态性（Single-Strand Conformation Polymorphism,SSCP）分析和序列测定分析。【结果】常见病原酵母菌26S rDNA D1/D2区的SSCP图谱具有明显的种间差异性和种内相似性,可以通过该方法对菌株进行初步的菌种鉴定。D1/D2-SSCP和序列分析相结合,对260余株临床酵母菌进行了菌种鉴定,共鉴定有10个属20个种,优势属为念珠菌属(Candida),优势种及其所占比例分别是：C. albicans (57.7%), C. parapsilosis (10.0%), C. tropicalis (9.2%), C. glabrata (6.7%)和C. krusei (5.8%),并发现过去从未或很少报道致病的酵母菌种,愈来愈多地出现在临床分离菌株中。【结论】 26S rDNA D1/D2区的SSCP图谱分析为临床酵母菌株的快速鉴定提供了新的方法;北京地区酵母菌临床分离株呈种群多样性分布,C. albicans虽然仍占优势,但其它念珠菌种的比例已达42%。     

甜樱桃(Prunus avium L.)品种S基因型鉴定

根据蔷薇科S-RNase基因(S基因)高度保守区C2和RC4区设计一对特异引物PruC2和PruC4R,对甜樱桃品种的基因组DNA进行S基因特异PCR扩增。克隆S基因的扩增片段,核酸序列在GenBank上搜索,确定了4种S基因的核酸序列和大小。结果表明,在琼脂糖凝胶上位置相同的扩增带其核酸序列相同,是同一种S基因。4种S基因扩增片段的大小分别是：S1为677bp,S3为762bp,S4为945bp,S6为456bp。参试的自交不亲和品种的S基因型分别是：红灯、红艳、早红宝石和先锋相同,为S1S3;抉择、红丰和那翁相同,为S3S4;大紫为S1S6;长把红为S1S4;养老为S2S6;自交亲和品种外引7号和斯太拉为S3S4。     

对5个S180克隆细胞株RAPD特征的研究

目的运用随机扩增多态性DNA(RAPD)技术建立S180的5个克隆细胞株的特异性图谱。方法运用23条引物对S180-S2D9、S180-S2D7、S180-S1F11、S180-S1H10、S180-S1B115个克隆细胞株的基因组DNA进行RAPD-PCR扩增,以琼脂糖电泳观察结果。结果筛选出3条在各克隆株扩增产物间有差异的引物。结论5个S180克隆细胞株的RAPD特征有明显区别。     

中国延边朝鲜族和延边汉族apoB,D17S30 VNTR多态性研究

应用聚合酶链反应(PCR) 法对中国延边朝鲜族和延边汉族apoB和D17S30 VNTR研究发现,中国延边朝鲜族和延边汉族等位基因频率总体分布具有显著性差异( P < 0105);apoB和D17S30 位点 VNTR 在中国延边朝鲜族和延边汉族中的观察杂合性、多态信息含量、个体鉴别力均大于017;中国延边朝鲜族和延边汉族中 D17S30 VNTR位点分别以 A3 和 A1 的频率为最高。结果表明,apoB和D17S30 VNTR 位点在中国延边朝鲜族和延边汉族中的等位基因频率分布具有很强的多态性,在研究中国延边朝鲜族起源、变迁以及与其他各民族间亲缘关系等方面具有广泛的应用价值,适用于中国延边朝鲜族和延边汉族的个体识别和亲子鉴定。     

Genetic variation at minisatellite loci D1S7, D4S139, D5S110 and D17S79 among three population groups of eastern India

Genetic variation at four minisatellite loci D1S7, D4S139, D5S110 and D17S79 in three predominant population groups of eastern India, namely Brahmin, Kayastha and Garo, are reported in this study. The Brahmin and Kayastha are of Indo-Caucasoid origin while the Garo community represents the Indo-Mongoloid ethnic group. The methodology employed comprised generation of HaeIII-restricted fragments of isolated DNA, Southern blotting, and hybridization using chemiluminescent probes MS1, pH30, LH1 and V1 for the four loci. All four loci were highly polymorphic in the population groups. Heterozygosity values for the four loci ranged between 0.68 and 0.95. Neither departure from Hardy-Weinberg expectations nor evidence of any association across alleles among the selected loci was observed. The gene differentiation value among the loci is moderate (G_ST = 0.027). A neighbour-joining tree constructed on the basis of the generated data shows very low genetic distance between the Brahmin and Kayastha communities in relation to the Garo. Our results based on genetic distance analysis are consistent with results of earlier studies based on serological markers and linguistic as well as morphological affiliations of these populations and their Indo-Caucasoid and Indo-Mongoloid origin. The minisatellite loci studied here were found to be not only useful in showing significant genetic variation between the populations but also to be suitable for human identity testing among eastern Indian populations.     

Single channel kinetic analysis of the cAMP effect on IKs mutants,S209F and S27D/S92D

The I_Ks current is important in the heart’s response to sympathetic stimulation. β-adrenergic stimulation increases the amount of I_Ks and creates a repolarization reserve that shortens the cardiac action potential duration. We have recently shown that 8-CPT-cAMP, a membrane-permeable cAMP analog, changes the channel kinetics and causes it to open more quickly and more often, as well as to higher subconductance levels, which produces an increase in the I_Ks current. The mechanism proposed to underlie these kinetic changes is increased activation of the voltage sensors. The present study extends our previous work and shows detailed subconductance analysis of the effects of 8-CPT-cAMP on an enhanced gating mutant (S209F) and on a double pseudo-phosphorylated I_Ks channel (S27D/S92D). 8-CPT-cAMP still produced kinetic changes in S209F + KCNE1, further enhancing gating, while S27D/S92D + KCNE1 showed no significant response to 8-CPT-cAMP, suggesting that these last two mutations fully recapitulate the effect of channel phosphorylation by cAMP.     

S／D法处理凝血因子浓缩物类制品的病毒灭活验证

以水泡性口炎病毒 (VSV)为指示病毒 ,验证应用有机溶剂 /去污剂 (简称S/D)法灭活血液制品中病毒的生产工艺 ,并对不同厂家不同批号的四种凝血因子浓缩物类制品 (中间品 )的病毒灭活效果进行了分析总结。结果表明当制品中TNBP和Tween80终浓度为 0 3%和 1 0 % ,在 2 5± 1℃处理 6小时后对于包膜病毒确有显著的灭活效果。     

基于28S rDNA D2基因片段与形态特征的矛茧蜂亚科系统发育研究（膜翅目：茧蜂科）

本研究选取矛茧蜂亚科Doryctinae（昆虫纲Insecta：膜翅目Hymenoptera：茧蜂科Braconidae）的6族15属18种做内群,茧蜂科其它7亚科11属11种做外群,首次结合同源核糖体28S rDNA D2基因序列片段和100个形态学和解剖学特征对该亚科进行了系统发育学研究。利用“非圆口类"的小腹茧蜂亚科Microgastrinae为根,以PAUP*4.0和MrBayes 3.0B4软件分别应用最大简约法（MP）和贝叶斯法对矛茧蜂亚科的分子数据和分子数据与非分子数据的结合体进行了运算分析;并以PAUP*4.0对矛茧蜂亚科的28S rDNA D2基因序列片段的碱基组成与碱基替代情况进行了分析。结果表明：矛茧蜂亚科的28S rDNA D2基因序列片段的GC含量在39.33%～48.28%之间变动,而对于碱基替代情况来讲,矛茧蜂亚科各成员间序列变异位点上颠换（transversion）大于转换（transition）。不同的分析算法所产生的系统发育树都表明矛茧蜂亚科是一个界限分明的单系群;在矛茧蜂亚科内,除了吉丁茧蜂族Siragrini为单系群外,其他族（矛茧蜂族Doryctini和方头茧蜂族Hecabolini）都是并系群。对于矛茧蜂亚科内各属之间的相互亲缘关系,不同算法所得的系统发育树的拓扑结构不完全一致,表明矛茧蜂亚科内（属及族）的系统发育关系还有待于进一步研究。     

The C1167T polymorphism of the catalase gene and polymorphic markers D11S907 and D11S2008 located in its vicinity are associated with diabetes mellitus type 2

To study the contribution of the catalase (CAT) gene in diabetes mellitus (DM) type 2, the allele and genotype frequencies of internal (polymorphism C1167T) and two neighboring (minisatellites D11S907 and D11S2008) polymorphic markers were studied in 132 healthy individuals and 154 patients from Moscow. Allele C and genotype CC of the C1167T polymorphism proved associated with a higher risk of DM type 2. Seven D11S907 alleles containing 14 to 20 dinucleotide repeats were found. The frequencies of alleles 15 and 16 and genotype 18/20 were significantly higher and those of allele 18 and genotypes 17/18 and 18/19 were lower in patients than in controls. Eight D11S2008 alleles containing 15 to 22 tetranucleotide repeats were found. The frequencies of alleles 17 and 18 and genotype 18/20 in patients were significantly higher than in controls. An association of the three polymorphic loci and DM type 2 was suggested.     

三个STR位点在哈萨克族中的遗传多态性

运用复合PCR扩增,6％变性聚丙烯酰胺凝胶电泳结合银染技术对我国新疆102位无关的哈萨克族个体进行D16S539,D7S820,D13S317的STR位点的调查,为建立新疆哈萨克族群体数据库提供资料。经统计学检验,3个位点的基因型频率分布符合Hardy-Weinberg平衡定律,结果显示3个位点的期望杂合度为：0.9439、0.9356、0.9304,累积PIC＝0.9905,DP＝0.9998,PE=9572。紫外,比较新疆哈萨克族与其他4个人群的等位片段频率,发现除与北京汉族在D7S820位点上无统计学意义外（P＞0.05）,其他均可见显著性差异（P＜0.05）。同时,在8个家系42人的调查中无一突变发现且均按孟德尔遗传规律传递。3个STR位点的联合分析在法医学应用及群体遗传学中显示了较高的价值。     

基于28S rDNA D1-D2基因片段与16S rDNA部分序列联合分析的叶肢介系统发育研究

叶肢介(Conchostraca)的系统发育问题一直是甲壳动物研究中颇具争议的一个课题.本研究测定了我国2种叶肢介(Eocyzicus mongolianus,Eoc yzicus orientalis)的28S rDNA D1-D2区基因序列和16S rDNA E-G区序列,并与GenBank中的20种叶肢介序列一起...