The importance of root gravitropism for inter-root competition and phosphorus acquisition efficiency: results from a geometric simulation model

We have observed that low soil phosphorus availability alters the gravitropic response of basal roots in common bean (Phaseolus vulgaris L.), resulting in a shallower root system. In this study we use a geometric model to test the hypotheses that a shallower root system is a positive adaptive response to low soil P availability by (1) concentrating root foraging in surface soil horizons, which generally have the highest P availability, and (2) reducing spatial competition for P among roots of the same plant. The growth of nine root systems contrasting in gravitropic response over 320 h was simulated in SimRoot, a dynamic three-dimensional geometric model of root growth and architecture. Phosphorus acquisition and inter-root competition were estimated with Depzone, a program that dynamically models nutrient diffusion to roots. Shallower root systems had greater P acquisition per unit carbon cost than deeper root systems, especially in older root systems. This was due to greater inter-root competition in deeper root systems, as measured by the volume of overlapping P depletion zones. Inter-root competition for P was a significant fraction of total soil P depletion, and increased with increasing values of the P diffusion coefficient (De), with root age, and with increasing root gravitropism. In heterogenous soil having greater P availability in surface horizons, shallower root systems had greater P acquisition than deeper root systems, because of less inter-root competition as well as increased root foraging in the topsoil. Root P acquisition predicted by SimRoot was validated against values for bean P uptake in the field, with an r ² between observed and predicted values of 0.75. Our results support the hypothesis that altered gravitropic sensitivity in P-stressed roots, resulting in a shallower root system, is a positive adaptive response to low P availability by reducing inter-root competition within the same plant and by concentrating root activity in soil domains with the greatest P availability. This revised version was published online in August 2006 with corrections to the Cover Date.     

Acid-Efflux Patterns of Primary and Secondary Roots of Ricinus communis (Euphorbiaceae)

Graviresponding primary roots of castor bean (Ricinus communis)were characterized by more acid efflux on their upper (i.e.rapidly growing) sides than their lower sides. Acid-efflux patternsof the upper and lower sides of horizontally oriented lateralroots were symmetrical. The onset of graviresponsiveness bysecondary roots correlated positively with the development ofasymmetric patterns of acid efflux similar to those of gravirespondingprimary roots. The addition of 1 mM sodium orthovanadate (aninhibitor of auxin-induced proton efflux) to the growth mediumabolished gravicurvature and the development of acid-effluxasymmetry by primary and secondary roots. These results suggestthat (i) the absence of an auxin-induced asymmetry of acid effluxmay be the factor responsible for uncoupling graviperceptionfrom gravitropism in lateral roots, and (ii) the developmentof an auxin-induced asymmetry of acid efflux may mediate theonset of graviresponsiveness by secondary roots of R. communis. Ricinus communis, castor bean, acid efflux, root gravitropism     

The RHG Gene Is Involved in Root and Hypocotyl Gravitropism in Arabidopsis thaliana

In higher plants, shoots show negative gravitropism and rootsshow positive gravitropism. To elucidate the molecular mechanismsof root and hypocotyl gravitropism, we segregated the secondmutation from the original phyB-1 mutant line which impairedboth root and hypocotyl gravitropism and characterized thisnovel mutation named rhg (for root and hyzypocotyl gravitropism).The rhg is a single recessive nuclear mutation and it is mappedon the lower part of the chromosome 1. Analyses on the gravitropicresponses of the rhg mutant indicate that root and hypocotylgravitropism are severely impaired but inflorescence stem gravitropismis not affected by the rhg mutation. In the rhg mutant seedlings,amyloplasts (statoliths for gravity-perception) were presentin the presumptive statocytes of roots and hypocotyls. Phototropismby roots and hypocotyls was not impaired in the rhg mutant.These results suggest that the RHG gene product probably actson the gravity-perception and/or the gravity-signal transductionin root and hypocotyl gravitropism. This is the first reportabout the genetic locus specifically involved in both root andhypocotyl gravitropism but not inflorescence stem gravitropism,supporting our hypothesis that the mechanisms of gravitropismare genetically different between hypocotyls and inflorescencestems. (Received March 11, 1997; Accepted April 17, 1997)     

Aggregative Root Placement: A Feature During Interspecific Competition in Inland Sand-Dune Habitats

Segregation of roots is frequently observed in competing root systems. However, recently, intensified root growth in response to a neighbouring plant has been described in pot experiments [Gersani M, Brown J S, O'Brien E E, Maina G M and Abramsky Z 2001. J. Ecol. 89, 660–669]. This paper examines whether intense root growth towards a neighbour (aggregation) plays a role in competitive interactions between plant species from open nutrient-poor mid-European sand ecosystems. In a controlled field-competition experiment, root distribution patterns of intra- and interspecific pairs as well as single control plants of Corynephorus canescens, Festuca psammophila, Hieracium pilosella, Hypochoeris radicata and Conyza canadensis were investigated after one growing season. Under intraspecific competition plants tended to segregate their root systems, while under interspecific competition most species tended to aggregate roots towards their neighbours even at the expense of root development at the opposite competition-free side of the target. Preference of a root aggregation strategy over the occupation of competition-free soil in interspecific competition emphasizes the importance of contesting between individuals in relation to mere resource acquisition. It is suggested that in the presence of a competitor the plants might use root aggregation as a defensive reaction to maintain a strong competitive response and exclusive access to the resources of already occupied soil volumes.     

The Effect of Soil Compaction on Differentiation of Late Metaxylem in Common Bean (Phaseolus vulgaris L.)

Recent studies among several plant species have shown that maturationof the largest vessels in primary xylem of roots occurs muchlater than is commonly assumed. These results have importantimplications for studies of water and nutrient uptake sincethe condition of the vessels, termed late metaxylem (LMX), mighthave a large effect on the potential conductivity of the xylem.To determine whether this phenomenon occurred in common bean(Phaseolus vulgaris L.), patterns of root xylem differentiationwere studied in young bean plants. Soil bulk density was variedin one trial to determine whether differentiation of LMX wassensitive to the growing medium. Vessels of LMX lost cell contentsand-became functional conduits between 100 and 150 mm from theroot apex. Increasing soil bulk density caused the zone of maturationof LMX to shift toward the root apex, but this zone was nevercloser than 67 mm. In the region where the primary root increasedin diameter as it merged with the hypocotyl, a zone was foundwhere vessels increased in number, had a reduced diameter, andwere arranged in a ring, the normal tetrarch arrangement ofthe xylem being lost. Potential conductivity in this zone wasconsiderably less than in zones with conventional large LMXvessels, so the zone appears to present an important restrictionto water transport from the root to the shoot. Thus, while thephenomenon of late maturation of LMX occurs in common bean,its significance in transport of water from roots to shootsis unclear Phaseolus vulgaris L., common bean, metaxylem, soil compaction, roots, anatomy     

Dimensions of Root Caps and Columella Tissues of Primary Roots of Ricinus communis Characterized by Differing Degrees of Graviresponsiveness

Primary roots of Ricinus communis having large caps and columellatissues are more graviresponsive than primary roots with smallcaps and columella tissues. The increased graviresponsivenessof roots with larger caps correlates positively with their columellatissues having larger length: width ratios than less graviresponsiveroots having smaller caps. Roots with wider tips typically aremore graviresponsive and have more extensive columellas thanroots with thinner tips. However, the size of the columellatissue correlates positively with graviresponsiveness, irrespectiveof the width of the root tip. These results indicate that differingdimensions of the columella tissue may be the basis for thediffering graviresponses of primary roots of R. communis. Root gravitropism, columella, root cap, primary root, Ricinus communis, castor bean     

Roots in space: a spatially explicit model for below-ground competition in plants

Game theory provides an untapped framework for predicting how below-ground competition will influence root proliferation in a spatially explicit environment. We model root competition for space as an evolutionary game. In response to nutrient competition between plants, an individual's optimal strategy (the spatial distribution of root proliferation) depends on the rooting strategies of neighbouring plants. The model defines and predicts the fundamental (in the absence of competition) and realized (in the presence of competition) root space of an individual plant. Overlapping fundamental root spaces guarantee smaller, yet still overlapping, realized root spaces as individuals concede some but not all space to a neighbour's roots. Root overlap becomes an intentional consequence of the neighbouring plants playing a nutrient foraging game. Root proliferation and regions of root overlap should increase with soil fertility, decline with the distance cost of root production (e.g. soil compactness) and shift with competitive asymmetries. Seemingly erratic patterns of root proliferation and root overlap become the expected outcome of nutrient foraging games played in soils with small-scale heterogeneities in nutrient availability.     

Root Growth, Secondary Root Formation and Root Gravitropism in Carotenoid-deficient Seedlings of Zea mays L.

The effect of ABA on root growth, secondary-root formation androot gravitropism in seedlings of Zea mays was investigatedby using Fluridone-treated seedlings and a viviparous mutant,both of which lack carotenoids and ABA. Primary roots of seedlingsgrown in the presence of Fluridone grew significantly slowerthan those of control (i.e. untreated) roots. Elongation ofFluridone-treated roots was inhibited significantly by the exogenousapplication of 1 mM ABA. Exogenous application of 1 µMand 1 nM ABA had either no effect or only a slight stimulatoryeffect on root elongation, depending on the method of application.The absence of ABA in Fluridone-treated plants was not an importantfactor in secondary-root formation in seedlings less than 9–10d old. However, ABA may suppress secondary-root formation inolder seedlings, since 11-d-old control seedlings had significantlyfewer secondary roots than Fluridone-treated seedlings. Rootsof Fluridone-treated and control seedlings were graviresponsive.Similar data were obtained for vp-9 mutants of Z. mays, whichare phenotypically identical to Fluridone-treated seedlings.These results indicate that ABA is necessary for neither secondary-rootformation nor for positive gravitropism by primary roots. Zea mays, gravitropism, carotenoid-deficient, Fluridone, root growth, vp-9 mutant     

Fine‐scale belowground species associations in temperate grassland

Evaluating how belowground processes contribute to plant community dynamics is hampered by limited information on the spatial structure of root communities at the scale that plants interact belowground. In this study, roots were mapped to the nearest one mm and molecularly identified by species on vertical (0–15 cm deep) surfaces of soil blocks excavated from dry and mesic grasslands in Yellowstone National Park (YNP) to examine the spatial relationships among species at the scale that roots interact. Our results indicated that average interspecific root – root distances for the majority of species were within a distance (3 mm) that roots have been shown to compete for resources. Most species placed their roots at random, although low root numbers for many species probably led to overestimating the occurrence of random patterns. According to theory, we expected that most of the remaining species would segregate their root systems to avoid competition. Instead we found that more species aggregated than segregated from others. Based on previous investigations, we hypothesize that species aggregate to increase uptake of water, nitrogen and/or phosphorus made available by neighbouring roots, or as a consequence of a reduction in the pathogenicity of soil biota growing in multispecies mixtures. Our results indicate that YNP grassland root communities are organized as closely interdigitating networks of species that potentially can support strong interactions among many species combinations. Future root research should address the prevalence and functional consequences of species aggregation across plant communities.     

Effect of phosphorus availability on basal root shallowness in common bean

Root gravitropism may be an important element of plant response to phosphorus availability because it determines root foraging in fertile topsoil horizons, and thereby phosphorus acquisition. In this study we seek to test this hypothesis in both two dimensional paper growth pouch and three-dimensional solid media of sand and soil cultures. Five common bean (Phaseolus vulgaris L.) genotypes with contrasting adaptation to low phosphorus availability were evaluated in growth pouches over 6 days of growth, and in sand culture and soil culture over 4 weeks of growth. In all three media, phosphorus availability regulated the gravitropic response of basal roots in a genotype-dependent manner. In pouches, sand, and soil, the phosphorus-inefficient genotype DOR 364 had deeper roots with phosphorus stress, whereas the phosphorus-efficient genotype G19833 responded to phosphorus stress by producing shallower roots. Genotypes were most responsive to phosphorus stress in sand culture, where relative root allocation to the 0–3- and 3–6-cm horizons increased 50% with phosphorus stress, and varied 300% (3–6 cm) to 500% (0–3 cm) among genotypes. Our results indicate that (1) phosphorus availability regulates root gravitropic growth in both paper and solid media, (2) responses observed in young seedlings continue throughout vegetative growth, (3) the response of root gravitropism to phosphorus availability varies among genotypes, and (4) genotypic adaptation to low phosphorus availability is correlated with the ability to allocate roots to shallow soil horizons under phosphorus stress.     

Water uptake and hydraulic redistribution across large woody root systems to 20 m depth

Deep water uptake and hydraulic redistribution (HR) are important processes in many forests, savannas and shrublands. We investigated HR in a semi‐arid woodland above a unique cave system in central Texas to understand how deep root systems facilitate HR. Sap flow was measured in 9 trunks, 47 shallow roots and 12 deep roots of Quercus, Bumelia and Prosopis trees over 12 months. HR was extensive and continuous, involving every tree and 83% of roots, with the total daily volume of HR over a 1 month period estimated to be approximately 22% of daily transpiration. During drought, deep roots at 20 m depth redistributed water to shallow roots (hydraulic lift), while after rain, shallow roots at 0–0.5 m depth redistributed water among other shallow roots (lateral HR). The main driver of HR appeared to be patchy, dry soil near the surface, although water may also have been redistributed to mid‐level depths via deeper lateral roots. Deep roots contributed up to five times more water to transpiration and HR than shallow roots during drought but dramatically reduced their contribution after rain. Our results suggest that deep‐rooted plants are important drivers of water cycling in dry ecosystems and that HR can significantly influence landscape hydrology.     

Complementarity in root architecture for nutrient uptake in ancient maize/bean and maize/bean/squash polycultures

Background and Aims

During their domestication, maize, bean and squash evolved in polycultures grown by small-scale farmers in the Americas. Polycultures often overyield on low-fertility soils, which are a primary production constraint in low-input agriculture. We hypothesized that root architectural differences among these crops causes niche complementarity and thereby greater nutrient acquisition than corresponding monocultures.

Methods

A functional–structural plant model, SimRoot, was used to simulate the first 40 d of growth of these crops in monoculture and polyculture and to determine the effects of root competition on nutrient uptake and biomass production of each plant on low-nitrogen, -phosphorus and -potassium soils.

Key Results

Squash, the earliest domesticated crop, was most sensitive to low soil fertility, while bean, the most recently domesticated crop, was least sensitive to low soil fertility. Nitrate uptake and biomass production were up to 7 % greater in the polycultures than in the monocultures, but only when root architecture was taken into account. Enhanced nitrogen capture in polycultures was independent of nitrogen fixation by bean. Root competition had negligible effects on phosphorus or potassium uptake or biomass production.

Conclusions

We conclude that spatial niche differentiation caused by differences in root architecture allows polycultures to overyield when plants are competing for mobile soil resources. However, direct competition for immobile resources might be negligible in agricultural systems. Interspecies root spacing may also be too large to allow maize to benefit from root exudates of bean or squash. Above-ground competition for light, however, may have strong feedbacks on root foraging for immobile nutrients, which may increase cereal growth more than it will decrease the growth of the other crops. We note that the order of domestication of crops correlates with increasing nutrient efficiency, rather than production potential.     

Modelling applicability of fractal analysis to efficiency of soil exploration by roots

BACKGROUND AND AIMS: Fractal analysis allows calculation of fractal dimension, fractal abundance and lacunarity. Fractal analysis of plant roots has revealed correlations of fractal dimension with age, topology or genotypic variation, while fractal abundance has been associated with root length. Lacunarity is associated with heterogeneity of distribution, and has yet to be utilized in analysis of roots. In this study, fractal analysis was applied to the study of root architecture and acquisition of diffusion-limited nutrients. The hypothesis that soil depletion and root competition are more closely correlated with a combination of fractal parameters than by any one alone was tested. MODEL: The geometric simulation model SimRoot was used to dynamically model roots of various architectures growing for up to 16 d in three soil types with contrasting nutrient mobility. Fractal parameters were calculated for whole roots, projections of roots and vertical slices of roots taken at 0, 2.5 and 5 cm from the root origin. Nutrient depletion volumes, competition volumes, and relative competition were regressed against fractal parameters and root length. KEY RESULTS: Root length was correlated with depletion volume, competition volume and relative competition at all times. In analysis of three-dimensional, projected roots and 0 cm slices, log(fractal abundance) was highly correlated with log(depletion volume) when times were pooled. Other than this, multiple regression yielded better correlations than regression with single fractal parameters. Correlations decreased with age of roots and distance of vertical slices from the root origin. Field data were also examined to see if fractal dimension, fractal abundance and lacunarity can be used to distinguish common bean genotypes in field situations. There were significant differences in fractal dimension and fractal abundance, but not in lacunarity. CONCLUSIONS: These results suggest that applying fractal analysis to research of soil exploration by root systems should include fractal abundance, and possibly lacunarity, along with fractal dimension.     

Abscisic acid is a negative regulator of root gravitropism in Arabidopsis thaliana

The plant hormone abscisic acid (ABA) plays a role in root gravitropism and has led to an intense debate over whether ABA acts similar to auxin by translating the gravitational signal into directional root growth. While tremendous advances have been made in the past two decades in establishing the role of auxin in root gravitropism, little progress has been made in characterizing the role of ABA in this response. In fact, roots of plants that have undetectable levels of ABA and that display a normal gravitropic response have raised some serious doubts about whether ABA plays any role in root gravitropism. Here, we show strong evidence that ABA plays a role opposite to that of auxin and that it is a negative regulator of the gravitropic response of Arabidopsis roots.     

Comparisons of the Respiratory Effluxes of Nodules and Roots in Six Temperate Legumes

The specific respiration rates of nodulated root systems, ofnodules and of roots were determined during active nitrogenfixation in soya bean, navy bean, pea, lucerne, red clover andwhite clover, by measurements on whole plants before and afterthe removal of nodule populations. Similar measurements weremade on comparable populations of the six legumes, lacking nodulesbut receiving abundant nitrate-nitrogen, to determine the specificrespiration of their roots. All plants were grown in a controlled-environmentclimate which fostered rapid growth. The specific respiration rates of nodulated root systems ofthe three grain and three forage legumes during a 7–14-dayperiod of vegetative growth varied between 10 and 17 mg CO₂g^–1 (dry weight) h^–1. This mean value consistedof two components: a specific root respiration rate of 6–9mg CO₂ g^–1 h^–1 and a specific nodule respirationrate of 22–46 mg CO₂ g^–1 h^–1. Nodule respirationaccounted for 42–70 per cent of nodulated root respiration;nodule weight accounted for 12–40 per cent of nodulatedroot weight. The specific respiration rates of roots lackingnodules and utilizing nitrate nitrogen were generally 20–30per cent greater than the equivalent rates of roots from nodulatedplants. The measured respiratory effluxes are discussed in thecontext of nitrogen nitrogen fixation, nitrate assimilation. Glycine max, Phaseolus vulgaris, Pisum sativum, Medicago sativa, Trifolium pratense, Trifolium repens, soya bean, navy bean, pea, lucerne, red clover, white clover, nodule respiration, root respiration, fixation, nitrate assimilation     

Pressure-Induced Water and Solute Flow Through Plant Roots

Water and salt flows through detopped sunflower, tomato andred kidney bean roots under applied pressure were studied usinga pressure chamber. Values of J_v for these root systems weremeasured applying variable pressure on the root medium, andL_p calculated. The K, Na and Cl fluxes under applied pressure were comparedwith those in intact plants at the same water flow rates. Tento 100 times higher Na and Cl fluxes were observed through detoppedroots under pressure as compared to those in the unpressurized,intact plants. It is suggested that the roots under pressureare not completely analogous to intact plant roots, and thatpressure-induced flow may not be a reliable method of determiningcharacteristics of ion flow in roots in relation to water flow. Key words: Volume flow, Hydraulic conductivity, K selectivity     

Detailed quantitative analysis of architectural traits of basal roots of young seedlings of bean in response to auxin and ethylene

Vertical placement of roots within the soil determines their efficiency of acquisition of heterogeneous belowground resources. This study quantifies the architectural traits of seedling basal roots of bean (Phaseolus vulgaris), and shows that the distribution of root tips at different depths results from a combined effect of both basal root growth angle (BRGA) and root length. Based on emergence locations, the basal roots are classified in three zones, upper, middle, and lower, with each zone having distinct architectural traits. The genotypes characterized as shallow on BRGA alone produced basal roots with higher BRGA, greater length, and more vertically distributed roots than deep genotypes, thereby establishing root depth as a robust measure of root architecture. Although endogenous indole-3-acetic acid (IAA) levels were similar in all genotypes, IAA and 1-N-naphthylphthalamic acid treatments showed different root growth responses to auxin because shallow and deep genotypes tended to have optimal and supraoptimal auxin levels, respectively, for root growth in controls. While IAA increased ethylene production, ethylene also increased IAA content. Although differences in acropetal IAA transport to roots of different zones can account for some of the differences in auxin responsiveness among roots of different emergence positions, this study shows that mutually dependent ethylene-auxin interplay regulates BRGA and root growth differently in different genotypes. Root length inhibition by auxin was reversed by an ethylene synthesis inhibitor. However, IAA caused smaller BRGA in deep genotypes, but not in shallow genotypes, which only responded to IAA in the presence of an ethylene inhibitor.     

植物根系养分捕获塑性与根竞争

为了更有效地从土壤中获取养分, 植物根系在长期的进化与适应中产生了一系列塑性反应, 以响应自然界中广泛存在的时空异质性。同时, 植物根系的养分吸收也要面对来自种内和种间的竞争。多种因素都会影响植物根竞争的结果, 包括养分条件、养分异质性的程度、根系塑性的表达等。竞争会改变植物根系的塑性反应, 比如影响植物根系的空间分布; 植物根系塑性程度差异也会影响竞争。已有研究发现根系具有高形态塑性和高生理塑性的植物在长期竞争过程中会占据优势。由于不同物种根系塑性的差异, 固定的对待竞争的反应模式在植物根系中可能并不存在, 其响应随竞争物种以及土壤环境因素的变化而变化。此外, 随着时间变化, 根系塑性的反应及其重要性也会随之改变。植物对竞争的反应可能与竞争个体之间的亲缘关系有关, 有研究表明亲缘关系近的植物可能倾向于减小彼此之间的竞争。根竞争对植物的生存非常重要, 但目前还没有研究综合考虑植物的各种塑性在根竞争中的作用。另外根竞争对群落结构的影响尚待深入的研究。     

Molecular markers reveal extensive intraspecific below-ground overlap of silver fir fine roots

Fine roots are expected to be important determinants of plant competition, but very little is known about the extent of root system overlap. Here, we describe the application of two highly variable plastide microsatellites to study the fine root distribution of tree individuals in a silver fir forest. We demonstrate that the spread of fine roots exceeds the width of above-ground parts, and that fine root overlaps among neighbouring trees are extensive both laterally and in depth. This approach will help to improve models of below-ground competition and will facilitate estimations of fine root biomass and thus of below-ground C pools.