Assessment of genetic structure among eastern North Pacific gray whales on their feeding grounds

Although most eastern North Pacific (ENP) gray whales feed in the Bering, Beaufort, and Chukchi Seas during summer and fall, a small number of individuals, referred to as the Pacific Coast Feeding Group (PCFG), show intra‐ and interseasonal fidelity to feeding areas from northern California through southeastern Alaska. We used both mitochondrial DNA (mtDNA) and 12 microsatellite markers to assess whether stock structure exists among feeding grounds used by ENP gray whales. Significant mtDNA differentiation was found when samples representing the PCFG (n = 71) were compared with samples (n = 103) collected from animals feeding further north (F_ST = 0.012, P = 0.0045). No significant nuclear differences were detected. These results indicate that matrilineal fidelity plays a role in creating structure among feeding grounds but suggests that individuals from different feeding areas may interbreed. Haplotype diversities were similar between strata (h_PCFG = 0.945, h_Northern = 0.952), which, in combination with the low level of mtDNA differentiation identified, suggested that some immigration into the PCFG could be occurring. These results are important in evaluating the management of ENP gray whales, especially in light of the Makah Tribe's proposal to resume whaling in an area of the Washington coast utilized by both PCFG and migrating whales.     

Spatial-temporal patterns in intra-annual gray whale foraging: Characterizing interactions between predators and prey in Clayquot Sound, British Columbia, Canada

In Clayquot Sound, British Columbia, gray whales (Eschrichtius robustus) forage primarily on mysids (Family Mysideae) and also on crab larvae (Family Porcellanidae) that are constrained to specific habitat, which relate to bathymetric depths. In this paper we characterize the interactions of gray whales and their prey by analyzing fine scale spatial‐temporal patterns in foraging gray whale distribution within a season. Kernel density estimators are applied to two seasons (1998 and 2002) of high‐resolution data on foraging by gray whales. By partitioning data from each foraging season into several time periods (12 in 1998 and 11 in 2002), using a temporal autocorrelation function, and generating kernel density estimated surfaces for each time period, it is possible to identify discrete areas of increasing and declining foraging effort. Our results indicate that gray whales forage on mysids throughout a season and opportunistically forage on crab larvae. The episodic crab larvae feeding may reduce, but not eliminate, pressure to mysid populations enabling mysids to reassemble swarms and continue to support gray whale foraging in the latter part of the season. Results suggest that when managing marine environments, gray whale populations require multiple and connected habitats for summer foraging.     

GRAY WHALE (ESCHRICHTIUS ROBUSTUS) HABITAT UTILIZATION AND PREY SPECIES OFF VANCOUVER ISLAND, B. C.

Habitat utilization and prey species of Vancouver Island gray whales were investigated by (1) summarizing 26 yr of distribution and feeding data and (2) conducting intensive observations in Clayoquot Sound, Vancouver Island, from 1989 to 1996. Whale distribution and movements were monitored from March to November through systematic boat surveys and whale-watch sighting programs. Prey species were collected by suction hose and plankton net or determined through analysis of fecal samples. Gray whales utilized virtually all of the southern west coast of Vancouver Island over the 26-yr observation period. Distribution, prey species, and feeding behavior showed marked variability during any one season and between years. Some feeding areas were used on an annual basis, others with >10-yr intervals between use. Feeding occurred in shallow sand or mud bays, eel grass beds, kelp beds, in the open water column, and at the surface. Young whales appeared to utilize habitat and prey species differently than adults. Main prey species included herring eggs/larvae ( Clupea harengus pallasi ), crab larvae ( Cancer magister megalops, Pachycbeles spp. zoea), mysids ( Holmesimysis sculpta, Neomysis rayii, Acanthomysis spp.), amphipods ( Ampelisca spp., Atylus borealis ), and ghost shrimp ( Callianassa californiensis ). The definition and relative importance of specific feeding grounds and the study of human impacts on this population are complicated by its broad and variable use of habitat and prey species.     

DISTRIBUTION OF KILLER WHALE PODS IN PRINCE WILLIAM SOUND, ALASKA 1984–1996

Thirteen years of encounter data (1984–1996) were used to examine killer whale distribution within Prince William Sound, Alaska. Four patterns of area use were found, which comprised differences between resident pods and transient groups and differences among resident groups. Resident pods frequented large open passages, while transient groups used the narrow passages and bays in the southwest. This dichotomy likely reflects resident use of salmon and transient use of pinniped prey resources, as well as the different foraging strategies required for these prey types. Four resident pods (AB, AI, AJ, and AN) used Knight Island Passage more than other areas of the Sound; two (AE and AK) used all areas of the Sound more evenly. Use of the Sound by the AT1 transient whales declined in the latter part of the study. Nearshore foraging for pinniped prey by the AT1 transient whales was more common in areas where these whales spend a disproportionate amount of time, suggesting that these areas were critical foraging habitat for them. No similar pattern emerged for Open-water Foraging for cetaceans by AT1 whales, nor for foraging by the resident whales.     

GENETIC ANALYSIS OF KILLER WHALE (ORCINUS ORCA) HISTORICAL BONE AND TOOTH SAMPLES TO IDENTIFY WESTERN U.S. ECOTYPES

Little is known about the historical range of killer whale ecotypes in the eastern North Pacific (ENP). It is possible that ranges have shifted in the last few decades because of changes in availability of food. In particular, the southern resident ecotype, currently found primarily in the inland waters of Washington State, is known to prey extensively on salmon, which have declined in recent decades along the outer coasts of Washington, Oregon, and California. To investigate historical distributions of this and the other ENP ecotypes, samples of teeth and bones were obtained from NMFS and museum collections. We amplified a short section of the mitochondrial DNA control region that contains four diagnostic sites that differentiate between haplotypes found in ecotypes of ENP killer whales. Results did not show any southern resident haplotypes in samples from south of the Washington State inland waterways. One whale genetically identified as a northern resident extends the known southernmost distribution of the population from Oregon to California. Items of diet identified from stomach contents of six of the whales genetically identified to ecotype conformed with what is known of the feeding habits of the various ecotypes.     

Do ship strikes threaten the recovery of endangered eastern North Pacific blue whales?

Blue whales were targeted in the North Pacific from 1905–1971 and are listed as endangered by the IUCN. Despite decades without whaling, abundance estimates for eastern North Pacific (ENP) blue whales (Balaenoptera musculus) suggest little evidence for a recent increase. One possible reason is fatal strikes by large ships, which have affected populations of other cetaceans and resulted in mitigation. We used a population dynamics model to assess the trends and status of ENP blue whales, and the effects of ship strikes. We estimate the population likely never dropped below 460 individuals, and is at 97% of carrying capacity (95% interval 62%–99%). These results suggest density dependence, not ship strikes, is the key reason for the observed lack of increase. We also estimate future strikes will likely have a minimal impact; for example, an 11‐fold increase in vessels would lead to a 50% chance the long‐term population would be considered depleted. Although we estimate ship strike mitigation would have minimal impacts on population trends and status, current levels of ship strikes are likely above legal limits set by the U.S. The recovery of ENP blue whales from whaling demonstrates the ability of blue whale populations to rebuild under careful management.     

Stable carbon and nitrogen isotope ratios in muscle and epidermis of arctic whales

Collection of minimally invasive biopsy samples has become an important method to establish normal stable isotopes reference ranges in various wildlife species. Baseline data enhance the understanding of feeding ecology, habitat use, and potential food limitation in apparently healthy, free‐ranging cetaceans. Epidermis and muscle were collected from subsistence‐hunted northern Alaskan bowhead (n= 133 epidermis/134 muscle) and beluga whales (n= 42/49) and subsistence‐hunted Russian gray whales (n= 25/17). Additional samples were obtained from gray whales stranded in California (n= 18/11) during mortality events (1999, 2000). Both δ¹⁵N and δ¹³C are trophic position and benthic/pelagic feeding indicators, respectively, in muscle and epidermis. Epidermis is generally enriched in ¹⁵N over muscle, while epidermal ¹³C is more depleted. Lipid extraction does not alter δ¹⁵N in either tissue, but affects epidermal δ¹³C. Nitrogen‐15 is enriched in muscle, but not epidermis of stranded compared to subsistence‐hunted gray whales, indicating probable protein catabolism and nutritional stress in stranded whales. Similarly, epidermal δ¹³C of harvested whales is lower than in stranded whales, suggesting depleted lipid stores and/or food limitation in stranded animals. Epidermal isotope signatures are similar in both present‐day bowheads and in an ancient sample from the Northern Bering Sea region. Although only one specimen, this suggests trophic level of the ancient whale compares to modern bowheads after a millennium.     

Prey preferences of sympatric fin (Balaenoptera physalus) and humpback (Megaptera novaeangliae) whales revealed by stable isotope mixing models

Over‐exploitation of top predators and fish stocks has altered ecosystems towards less productive systems with fewer trophic levels. In the Celtic Sea (CS), discards and bycatch levels have prompted concern about some fisheries, while fin and humpback whales are recovering from centuries of over‐exploitation. A lack of empirical evidence on the preferred diet of some predators such as whales in the CS has hindered the implementation of effective conservation measures using an ecosystem‐based approach to fisheries management. Using a Bayesian framework (SIAR), stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotope mixing models were used to assign proportionate diet solutions to fin and humpback whales (skin biopsies) and putative prey items: herring (Clupea harengus), sprat (Sprattus sprattus), and krill (Meganyctiphanes norvegica and Nyctiphanes couchii) in the CS. Krill was the single most important prey item in the diet of fin whales, but one of the least important for humpback whales (albeit based on a small sample of humpback whale samples). Age 0 sprat and herring comprised a large proportion of the diet of both species, followed by older sprat (age 1–2) and older herring (age 2–4). An ecosystem based approach to fisheries management will be required in the CS if we seek effective conservation of both fin and humpback whales, and sustainable fisheries.     

Genetic variation at enzyme loci in North Atlantic minke whales,Balaenoptera acutorostrata

Electrophoretic variation within and between North Atlantic minke whale samples(Balaenoptera acutorostrata) from West Greenland, Iceland, and Norway was investigated. In the West Greenland samples, 28 enzyme systems were examined, representing 36 loci, of which 6 were found to be polymorphic. In Icelandic and Norwegian samples, 22 enzyme systems were examined, representing 29 loci, of which 6 and 5 were found to be polymorphic, respectively. The average heterozygosity was 0.058 (SE=0.024) in samples from West Greenland, 0.074 (SE=0.028) in samples from Iceland, and 0.054 (SE=0.023) in samples from Norway. No significant deviations from the expected Hardy—Weinberg genotypic frequencies, within samples taken from the same area, were found. Significant differences in allele frequencies were observed, however, between samples from the three different areas. The average Nei's genetic distance was 0.014 and the averageF _st value was 0.126. The genetic differences between the samples from the different areas indicate that those from West Greenland, Iceland, and Norway represented different breeding populations.     

The peculiarities of foraging migrations of the Korean-Okhotsk gray whale (<Emphasis Type="Italic">Eschrichtius robustus</Emphasis>) population in russian waters of the Far Eastern seas

Photographic identification of the Korean-Okhotsk gray whale Eschrichtius robustus population has been conducted since 2002 by researchers of the Institute of Marine Biology at the Far East Branch of the Russian Academy of Sciences (IMB FEB RAS), with financial support provided by Exon Neftegas, Ltd. and Sakhalin Energy Investment Co., in order to study the migration features and biology of this species. In 2008, photo-ID studies were carried out in two areas, off the northeastern coast of Sakhalin Island and off the southeastern coast of Kamchatka. As a result of the studies, 122 whales known from the Sakhalin gray whale catalogue were photographed. Of them, 97 individuals were registered off Sakhalin, 24, off Kamchatka, and one whale was observed at both sites. In addition, 25 more gray whales that had not been sighted off Sakhalin Island before were found off the coast of Kamchatka. Based on these photographic materials, the whales physical and skin conditions were also analyzed. Cases of sightings of gray whales in areas that are remote from their traditional summer and fall feeding grounds in the Far Eastern seas of Russia are discussed.     

The diets of humpback whales (Megaptera novaeangliae) on the shelf and oceanic feeding grounds in the western North Pacific inferred from stable isotope analysis

Humpback whales feed on a variety of prey, but significant differences likely occur between regional feeding grounds. In this study, the diets of humpback whales were analyzed by comparing stable isotope ratios in animal tissues at three humpback whale feeding grounds in the Russian Far East: Karaginsky Gulf, Anadyr Gulf, and the Commander Islands. Anadyr Gulf is a neritic zone far from a shelf break, Karaginsky Gulf is a neritic zone close to a shelf break, and the Commander Islands represent an open oceanic ecosystem where whales feed off the shelf break. Samples from the Commander Islands had the lowest mean δ¹³C and δ¹⁵N values (mean ± SE: δ¹³C = ?18.7 ± 0.1, δ¹⁵N = 10.4 ± 0.1) compared to the samples from Karaginsky Gulf (δ¹³C = ?17.2 ± 0.1, δ¹⁵N = 12.7 ± 0.2) and Anadyr Gulf (δ¹³C= ?17.8 ± 0.1, δ¹⁵N = 14.0 ± 0.4). The samples from Anadyr Gulf had the highest δ¹⁵N values, while the samples from Karaginsky Gulf had the highest δ¹³C values. Both δ¹³C and δ¹⁵N values differed significantly among all three areas. Our data support the hypothesis that humpback whales tend to feed on fish in neritic areas and on plankton in deep oceanic waters.     

Improved estimates of digestion correction factors and passage rates for harbor seal (Phoca vitulina) prey in the northeast Atlantic

Diet composition in pinnipeds is widely estimated using hard prey remains recovered from feces. To estimate the size and number of prey represented in fecal samples accurately, digestion correction factors (DCFs) must be applied to measurements and counts of fish otoliths and cephalopod beaks. In this study, 101 whole prey feeding trials were conducted with six harbor seals (Phoca vitulina) and 18 prey species. We derived species‐ and grade‐specific estimates of digestion coefficients (DCs) and species‐specific recovery rates (RRs) to account for partial and complete digestion, respectively. Greater than 98% of otoliths were passed within three days of consumption. RRs were smallest for Atlantic salmon smolts (RR = 0.306, SE = 0.031) and increasingly larger for sandeels (RR = 0.494, SE = 0.017), flatfish (RR = 0.789, SE = 0.033), and large gadoids (RR = 0.944, SE = 0.034). Species‐specific otolith width DCs were smallest for Trisopterus species (DC = 1.14, SE = 0.015) and increasingly larger for flatfish (DC = 1.27, SE = 0.045), large gadoids (DC = 1.32, SE = 0.067) and sandeels (DC = 1.57, SE = 0.035). RRs were similar to those from gray seals (Halichoerus grypus), but harbor seal species‐ and grade‐specific DCs were generally smaller. Differences in partial and complete digestion rates among prey species and between seal species highlight the importance of applying DCFs when reconstructing diet.     

Using pre- and postexploitation samples to assess the impact of commercial whaling on the genetic characteristics of eastern North Pacific gray and humpback whales and to compare methods used to infer historic demography

Many species of whales went through recent bottlenecks due to commercial whaling. These declines were rapid and recent relative to the life spans and generation times of these species, raising questions regarding to what degree commercial whaling influenced the genetic characteristics of these populations. We analyzed mitochondrial and nuclear DNA from pre- and postwhaling samples from two populations that have arguably shown the greatest degree of recovery: eastern North Pacific gray and humpback whales. We also compare the performance of different methods to test for historic bottlenecks and infer past demography based on genetic data. We found substantially higher levels of genetic diversity in gray than in humpback whales (for both time periods), likely due to recent connectivity between Atlantic and Pacific gray whale populations. Other than mitochondrial diversity in humpback whales, levels of diversity were not lower in contemporary samples relative to prewhaling samples, indicating that commercial whaling had a minimal impact on metrics of genetic diversity themselves. However, it did have large impacts on the patterns of diversity, as evidenced by all coalescent-based methods showing clear evidence of a bottleneck for both populations, whereas all but one method not based on the coalescent failed to detect a bottleneck.     

FORAGING STRATEGIES OF SYMPATRIC KILLER WHALE (ORCINUS ORCA) POPULATIONS IN PRINCE WILLIAM SOUND, ALASKA

Killer whales ( Orcinus orca ) feed on a wide variety of fish, cephalopods, and marine mammals throughout their cosmopolitan range; however, the dietary breadth that characterizes the species is not reflected in all populations. Here, we present the findings of a 14-yr study of the diet and feeding habits of killer whales in Prince William Sound, Alaska. Two non-associating forms of killer whale, termed resident and transient (Bigg et al. 1987), were identified. All prey seen taken by transients were marine mammals, including harbor seals ( Phoca vitulina ), Dall's porpoises ( Phocoenoides dalli ), Steller sea lions ( Eumetopias jubatus ), and harbor porpoises ( Phocoena phocoena ). Resident killer whales appeared to prey principally on salmon ( Oncorhynchus spp.), preferring coho salmon ( O. kisutch ) over other, more abundant salmon species. Pacific herring ( Clupea pallasi ) and Pacific halibut ( Hippocampus stenolepis ) were also taken. Resident killer whales frequently were seen to interact in non-predatory ways with Steller sea lions and Dall's porpoises, while transients were not. Differences in the social organization and behavior of the resident and transient killer whales in Prince William Sound are discussed in the light of the dietary differences documented here.     

A population size estimate of the finless porpoise,Neophocaena phocaenoides, from aerial sighting surveys in Ariake Sound and Tachibana Bay, Japan

We estimated the population size of the finless porpoise (Neophocaena phocaenoides) in Ariake Sound and Tachibana Bay of western Kyushu, southwestern Japan, from aerial sighting surveys using line transect methods. All 12 surveys were conducted from May 1993 to May 1994 (8 in Ariake Sound and 4 in Tachibana Bay). In addition to these, 14 surveys were also carried out to obtain information on porpoise occurrence in Tachibana Bay (5 surveys) and in neighboring Sumo Nada (5) and Yatsushiro Sound (4). In Ariake Sound, 225 porpoise groups (369 animals) were detected during all flights totalling 1,694.4 km. In Tachibana Bay, a total of 997.8 km was surveyed and 55 groups (290 animals) were sighted. However, no sightings were recorded in Sumo Nada (distance searched = 148.7 km) and Yatsushiro Sound (208.4 km). In Ariake Sound, few sightings were recorded from waters shallower than 5 m in depth. In Tachibana Bay all animals were detected from waters of less than 50 m depth. The population size was estimated as 1,983 animals in Ariake Sound (95% CI = 1,382-2,847), 1,110 in Tachibana Bay (95% CI = 642-1,920), and 3,093 in the 2 waters (1.3 individuals/km², 95% CI = 2,278-4,201).     

Critically endangered western gray whales migrate to the eastern North Pacific

Western North Pacific gray whales (WGWs), once considered extinct, are critically endangered with unknown migratory routes and reproductive areas. We attached satellite-monitored tags to seven WGWs on their primary feeding ground off Sakhalin Island, Russia, three of which subsequently migrated to regions occupied by non-endangered eastern gray whales (EGWs). A female with the longest-lasting tag visited all three major EGW reproductive areas off Baja California, Mexico, before returning to Sakhalin Island the following spring. Her 22 511 km round-trip is the longest documented mammal migration and strongly suggests that some presumed WGWs are actually EGWs foraging in areas historically attributed to WGWs. The observed migration routes provide evidence of navigational skills across open water that break the near-shore north–south migratory paradigm of EGWs. Despite evidence of genetic differentiation, these tagging data indicate that the population identity of whales off Sakhalin Island needs further evaluation.     

Activity budget and diving behavior of gray whales (Eschrichtius robustus) in feeding grounds off coastal British Columbia

Behavior and diving patterns of summer resident gray whales ( Eschrichtius robustus ) foraging on mysids were studied in coastal bays along the north shore of Queen Charlotte Strait, British Columbia. In this region, gray whales were found to feed primarily on planktonic prey rather than on the benthos as in their primary feeding areas further north. During the summers of 1999 and 2000, whales spent most of their time actively feeding or searching for prey (77%), whereas only 15% of their time was spent traveling and 8% socializing. The majority of the dives were short; the mean dive duration was 2.24 min with approximately three respirations per surfacing and 15 s between blows. Whales dove frequently (26.7 h⁻¹), spending only 17% of their time at the surface with an overall blow rate of 1.14 respirations per minute. Activity states were characterized by significantly different diving and respiratory parameters; feeding whales dove more frequently, with shorter intervals between respirations, thus spending less time at the surface compared to when traveling or searching. This diving pattern differs from benthic-feeding whales and likely optimizes capture of the mobile mysid swarms in shallow waters.     

Mitochondrial and nuclear genetic variation across calving lagoons in Eastern North Pacific gray whales (Eschrichtius robustus)

Accurate knowledge of population structure in cetaceans is critical for preserving and managing breeding habitat, particularly when habitat is not uniformly protected. Most eastern gray whales return to their major breeding range each winter along the Pacific coast of Baja California, Mexico, concentrating in 3 major calving lagoons, but it is unknown whether genetic differences exist between lagoons. Previous photo-identification studies and genetic studies suggest that gray whales may return to their natal lagoons to breed, potentially resulting in the buildup of genetic differences. However, an earlier genetic study used only one genetic marker and did not include samples from Bahia Magdalena, a major calving lagoon not currently designated as a wildlife refuge. To expand on this previous study, we collected genetic data from the mitochondrial control region (442 bp) and 9 microsatellite markers from 112 individuals across all 3 major calving lagoons. Our data suggest that migration rates between calving lagoons are high but that a small but significant departure from panmixia exists between Bahia Magdalena and Laguna San Ignacio (Fisher's Exact test, P < 0.0001; F(ST) = 0.006, P = 0.025). Coalescent simulations show that the lack of extensive population structure may result from the disruption of structure due to whaling. Another possibility is that rates of migration have always been high (>10% per generation). In addition, microsatellite data showed evidence of a severe population bottleneck. Eastern gray whales are still recovering from the impacts of whaling on their breeding grounds, and these populations should be protected and monitored for future genetic changes.     

SEASONAL PATTERNS IN THE ABUNDANCE AND DISTRIBUTION OF CALIFORNIA CETACEANS, 1991–1992

This study presents a detailed seasonal comparison of the abundance and distribution of cetaceans within 100-150 nmi (185-278 km) of the California coast during 1991 and 1992. The results of a shipboard line-transect survey conducted in July-November 1991 ("summer") were compared to those from aerial line-transect surveys conducted in March-April 1991 and February-April 1992 ("winter"). Using a confidence-interval-based bootstrap procedure, abundance estimates for six of the eleven species included in the comparison exhibited significant (α= 0.05) differences between the winter and summer surveys. Pacific white-sided dolphins ( Lagenorhynchus obliquidens ), Risso's dolphins ( Grampus griseus ), common dolphins ( Delphinus spp.), and northern right whale dolphins ( Lissodelphis borealis ) were significantly more abundant in winter. The abundance of blue whales ( Balaenoptera musculuss ) and gray whales ( Eschrichtius robustus ) reflected well-documented migratory patterns. Fin whales ( B. physalus ) were significantly more abundant during summer. No significant differences in seasonal abundance were identified for Dall's porpoises ( Phocoenoides dalli ), bottlenose dolphins ( Tursiops truncatus ), killer whales ( Orcinus orca ), sperm whales ( Physeter macrocephalus ), or humpback whales ( Megaptera novaeangliae ). Significant north/south shifts in distribution were found for Dall's porpoises, common dolphins, and Pacific white-sided dolphins, and significant inshore/offshore differences were identified for northern right whale dolphins and humpback whales.     

CATCHES OF HUMPBACK AND OTHER WHALES FROM SHORE STATIONS AT MOSS LANDING AND TRINIDAD, CALIFORNIA, 1919–1926

Logbook data from California shore whaling stations at Moss Landing (1919–1922 and 1924) and Trinidad (1920 and 1922–1926) are analyzed. The logs for the two stations record the taking of 2,111 whales, including 1,871 humpbacks, 177 fin whales, 26 sei whales, 3 blue whales, 12 sperm whales, 7 gray whales, 1 right whale, 1 Baird's beaked whale, and 13 whales of unspecified type (probably humpbacks). Most whales were taken from spring to autumn, but catches were made in all months of some years. The sex ratios of humpback, fin, and sei whales (the three species with sufficient sample sizes to test) did not differ from parity. Primary prey, determined from stomach contents, included sardines and euphausiids for both humpback and fin whales, and 'plankton' (probably euphausiids) for sei whales. The prevalence of pregnancy was 0.46 among mature female humpbacks and 0.43 among mature female fin whales, although these values are reported with caution. Information on length distribution for all species is summarized. Analysis of the catch data for this and other areas supports the current view that humpback whales along the west coast of the continental United States comprise a single feeding stock and also suggests that the present population is well below pre-exploitation levels.