Distribution of genetic diversity within and between Western Mediterranean island populations of the black rat Rattus rattus (L. 1758)

Genetic diversity was estimated by allozyme analysis at 26 loci in black rat populations (Rattus rattus) from 15 western Mediterranean islands (Hyéres, Corsica, Sardinia and related islets). Although overall variability levels were low (H = 0.025), the mean heterozygosity values for the islands were similar to those for three reference mainland populations. Within the islands, however, genetic diversity varied in relation to island size and geographic isolation. In particular, most small insular populations were significantly more variable than those on both large and isolated islands. The generic relationships between island populations were established by F_ST analyses indicating possible geographic origins and patterns of colonization. The maintenance of unexpectedly high levels of variability in the small island populations is discussed in relation to changes in the demographic and social structure observed in these populations. These island populations of black rat illustrate how genetic diversity may be efficiently maintained in a series of interconnected spatially fragmented populations.     

Island colonization and founder effects: the invasion of the Guadeloupe islands by ship rats (Rattus rattus)

The stepwise colonization of islands within an archipelago is typically punctuated by successive founder effects, with each newly founded population being a subsample of the gene pool of the source island. Thus, the genetic signature of successive bottlenecks should be detected when analysing the genetic structure between islands of an archipelago. To test this prediction, we investigated introduced ship rat populations, Rattus rattus (Linnaeus, 1758), in the Guadeloupe Archipelago. Three different methods, commonly named the heterozygosity excess, the mode-shift indicator and the M ratio method, were used to detect bottlenecks from genetic data obtained with eight microsatellite markers on Guadeloupe and two neighbouring islands, Petite-Terre and Fajou. Moreover, a recent eradication failure on Fajou allowed us to test the accuracy of the methods in an 'experimental-like' situation. The results indicate that rats were introduced on Guadeloupe first, which then became the source population for independent secondary colonization of Fajou and Petite-Terre. Moreover, the heterozygosity excess and the mode-shift indicator only detected bottlenecks for the recent colonization of Petite-Terre and the eradication failure on Fajou. However, bottlenecks were detected for all the populations using the M ratio method. This could be interpreted as the remaining signature of the early introduction of the ship rat in the archipelago.     

Density of Ixodes scapularis ticks on Monhegan Island after complete deer removal: A question of avian importation?

Questing adult blacklegged tick (Ixodes scapularis Say) abundance declined markedly three years after the 1999 removal of white‐tailed deer (Odocoileus virginianus Zimmermann) from Monhegan Island, ME. Since 2000, subadult ticks have not been found on Norway rats (Rattus norvegicus Berkenhout); questing nymphs have not been found since 2002. This suggested I. scapularis was reintroduced annually via bird importation of subadult ticks, but unable to complete its two‐year life cycle on the island due to lack of deer. To investigate this, we used uncertainty analysis to estimate 1) questing adult ticks/ha that would result from avian importation of nymphs, and 2) questing adult ticks/ha on Monhegan Island, using bird capture and tick burden data from Appledore Island, ME, flagged tick data from Monhegan Island, and ten uncertain parameters. During the deer‐fed period (1990–2001), estimated tick density on Monhegan Island was 18 times greater than that of imported ticks. During the post‐deer‐fed period (2002–2008), Monhegan Island tick density was equivalent to imported tick density. This supported the premise that all I. scapularis ticks on Monhegan Island have been bird‐derived since 2002.     

Role of small mammals in the ecology of Borrelia burgdorferi in a peri-urban park in north coastal California

The role of small mammals other than woodrats in the enzootiology of the Lyme disease spirochete, Borrelia burgorferi, was assessed in a peri-urban park. Mammals were collected monthly from September through to April. Following tick removal, the animals were tested for B. burgdorferi by culture of ear-punch biopsies. Larvae and nymphs that were intermediate in morphology between Ixodes spinipalpis and Ixodes neotomae occurred on several species of rodents (Peromyscus truei, Peromyscus californicus, Microtus californicus, Rattus rattus and Reithrodontomys megalotis) and the brush rabbit (Sylvilagus bachmani). Morphometric analyses of these I. spinipalpis-like ticks and the offspring from two I. neotomae females from this site suggest that I. neotomae may be conspecific with I. spinipalpis. Borrelia burgdorferi was isolated from eight out of 109 (7.3%), three out of 16 (18.8%), two out of 38 (5.3%) and two out of six (33.3%) P. truei, P. maniculatus, M. californicus and R. rattus, respectively. One brush rabbit yielded the first isolate of B. burgdorferi from a lagomorph in western North America. This isolate and three others derived from unfed I. spinipalpis-like nymphs failed to produce infection when inoculated intradermally into 11–12 P. maniculatus each. Likewise, no spirochetes were detected in 420 Ixodes pacificus nymphs derived from larvae fed on animals inoculated with these isolates. An additional isolate, derived from an I. spinipalpis-like nymph, was recovered by ear-punch biopsies from five out of 12 (42%) needle-inoculated P. maniculatus. However, spirochetes were not detected in 20 I. pacificus nymphs fed as larvae on each of five mice (two infected and three uninfected) inoculated with this isolate. We conclude that brush rabbits and several species of rodents besides woodrats may contribute to the maintenance of B. burgdorferi because they harbour the spirochete and are fed upon by competent enzootic and bridge vectors.     

Pasteurella multocida infections in rockhopper penguins (Eudyptes chrysocome) from Campbell Island, New Zealand

During an investigation into the population decline of rockhopper penguins (Eudyptes chrysocome) on Campbell Island, New Zealand, avian cholera (Pasteurella multocida) was found in dead adults and chicks. An RNA enveloped virus was isolated from Ixodes uriae, a tick which commonly parasitizes rockhopper penguins on the island. It is not known whether this virus is virulent for penguins. No evidence was obtained to suggest that avian cholera was the principal cause for the decline in the rockhopper penguin population.     

Prevalence of Borrelia burgdorferi and Babesia microti in mice on islands inhabited by white-tailed deer

Borrelia burgdorferi and Babesia microti were isolated from 35 of 51 white-footed mice (Peromyscus leucopus) and meadow voles (Microtus pennsylvanicus) captured on two Narragansett Bay, R.I., islands inhabited by deer, the principal host for the adult stages of the vector tick, Ixodes dammini. Immature ticks parasitized mice from both islands. From 105 mice captured on four other islands not inhabited by deer neither pathogen was isolated, nor were I. dammini found.     

Prevalence of Borrelia burgdorferi and Babesia microti in mice on islands inhabited by white-tailed deer.

Borrelia burgdorferi and Babesia microti were isolated from 35 of 51 white-footed mice (Peromyscus leucopus) and meadow voles (Microtus pennsylvanicus) captured on two Narragansett Bay, R.I., islands inhabited by deer, the principal host for the adult stages of the vector tick, Ixodes dammini. Immature ticks parasitized mice from both islands. From 105 mice captured on four other islands not inhabited by deer neither pathogen was isolated, nor were I. dammini found.     

海南岛小兽类寄生蜱的群落结构

本文定量研究了海南岛三亚市９种小兽类体外寄生蜱的群落结构,共发现８种寄生蜱,粒形硬蜱的宿主范围广,在所捕获的９种小兽体外均有寄生。珀氏长吻松鼠体表粒形硬蜱率相当高（＞５０％）。社鼠和海南毛猥的多样性指数低。     

Epizootiological and epidemiological study of hantavirus infection in Japan

Epizootiological surveys on hantavirus infections in rodents were carried out in various areas of Japan, including the four major islands of Hokkaido, Honshu, Shikoku, and Kyushu from 2000 to 2003. A total of 1,221 rodents and insectivores were captured. Seropositive animals were found in Apodemus (A.) speciosus (5/482, 1.0%), Rattus (R.) norvegicus (4/364, 1.1%), R. rattus (3/45, 6.7%), and Clethrionomys (C.) rufocanus (7/197, 3.6%). The partial S segment was amplified from one seropositive R. rattus captured at Hakodate. The nucleotide sequence showed 96% identity with the Seoul virus (SEOV) prototype strain SR-11. In addition, we conducted an epidemiological survey on human hantavirus infection in a high-risk population, the personnel of the Japan Ground Self-defense Force on Hokkaido. One out of 207 human blood samples was positive for anti-hantavirus antibody by IFA, ELISA, and WB analysis. The result of the serotype specific ELISA indicates that this individual acquired SEOV infection. This study indicates that A. speciosus, R. norvegicus, R. rattus, and C. rufocanus carry hantaviruses as the reservoir animals in Japan. Infected R. rattus and R. norvegicus in port areas could be the sources of human SEOV infection and a threat to travelers and individuals working in seaports.     

Impacts of sedimentation on soft-bottom benthic communities in the southern islands of Singapore

Benthic community data from eight stations around Pulau Semakau, an island south of Singapore, were collected during three surveys and analysed to determine changes in community structure under different sediment regimes resulting from construction activity at the eastern part of Pulau Semakau. Multidimensional Scaling (MDS) Configurations indicated distinct changes in the abundance, family number and diversity of benthic invertebrate fauna, which corresponded to sedimentation rate. SIMPER analysis suggested that polychaetes tolerate increased sedimentation better than crustaceans and molluscs. Sedimentation rate and other physico-chemical parameters were also investigated to determine the relationship between environmental factors and benthic community structure. Results from Principal Component Analysis (PCA) showed that sedimentation rate, sediment composition and ammonia concentration were the most important factors impacting the benthic community.     

Chromosomal complements of five species of Indian mammals

The chromosomal complements of five species of mammals, Mus musculus (Linn.), Rattus rattus rattus (Linn.), Bandicota bengalensis (Gray and Hardw.), Funambulus pennanti (Wr.) and Lepus ruficaudatus (Geoff.) were elaborated. The karyotypes of all the species were compared. The diploid number (2n) in Mus is 40, Rattus 42, Bandicota 42, Funambulus 54 and Lepus 48. An extra large X-chromosome was observed in one population of male Rattus rattus rattus (Linn.), which might have been formed as a result of duplication of the terminal segments of both the arms of the chromosomes.     

Effects of invasive rats and burrowing seabirds on seeds and seedlings on New Zealand islands

Rats (Rattus rattus, Rattus norvegicus, Rattus exulans) are important invaders on islands. They alter vegetation indirectly by preying on burrowing seabirds. These seabirds affect vegetation through nutrient inputs from sea to land and physical disturbance through trampling and burrowing. Rats also directly affect vegetation though consumption of seeds and seedlings. Seedling communities on northern New Zealand islands differ in composition and densities among islands which have never been invaded by rats, are currently invaded by rats, or from which rats have been eradicated. We conducted experimental investigations to determine the mechanisms driving these patterns. When the physical disturbance of seabirds was removed, in soils collected from islands and inside exclosures, seedling densities increased with seabird burrow density. For example, seedling densities inside exclosures were 10 times greater than those outside. Thus the negative effects of seabirds on seedlings, by trampling and uprooting, overwhelm the potentially beneficial effects of high levels of seed germination, seedling emergence, and possibly seed production, which result from seed burial and nutrient additions. Potential seedling density was reduced on an island where rats were present, germination of seeds from soils of this island was approximately half that found on other islands, but on this island seedling density inside exclosures was 7 times the density outside. Although the total negative effects of seabirds and rats on seedling densities are similar (reduced seedling density), the differences in mechanisms and life stages affected result in very different filters on the plant community.     

Invasive species and land bird diversity on remote South Atlantic islands

Invasive species pose significant threats to biodiversity, especially on islands. They cause extinctions and population declines, yet little is known about their consequences on the emergent, metacommunity-level patterns of native species in island assemblages. We investigated differences in species–area relationships, nestedness, and occupancy of 9 species of native land birds between island assemblages with and without invasive Norway rats (Rattus norvegicus) in the Falkland Archipelago. We found that species–area curves, nestedness, and individual species’ occurrences differed between island assemblages with and without rats. Rat-free islands had, on average, 2.1 more land bird species than rat-infested islands of similar size. Passerine bird communities on islands with and without rats were significantly nested, but nestedness was significantly higher on rat-free islands than on rat-infested islands. The presence of rats was associated with differences in the incidence of many, but not all bird species. On rat free islands the occurrence of all species increased with island area. The occurrence of most, albeit not all, bird species was lower on islands with than on islands without rats. Two species of conservation concern, Troglodytes aedon cobbi and Cinclodes antarcticus, were abundant on rat-free islands, but absent or found at very low frequencies on islands with rats. The occurrence of three species was not associated with the presence of rats. The patterns presented here can be used to evaluate the consequences of ongoing rat eradications for passerine diversity, distribution, and abundance.     

Populations of the ticks Ixodes (Pholeoixodes) hexagonus and Ixodes (Pholeoixodes) canisuga infesting suburban foxes, Vulpes vulpes

Only two species of tick (Ixodes hexagonus and Ixodes canisuga) were found to infest suburban foxes. The populations of these two ticks were examined, their distributions within the host population described, and infestation levels of I hexagonus discussed in relation to the sex, age and behaviour of the host. The most important factor regulating the level of tick infestation is probably the degree of den usage by the host. The tick infestations were found to have minimal effect on the host, and even an abnormally high level of infestation found on one fox was not considered to be lethal.     

Bioremediation of oil contaminated beach sediments using indigenous microorganisms in singapore

The potential of using indigenous microorganisms in beach sediments to degrade petroleum hydrocarbons emanating from marine oil spillages in the Straits of Singapore was investigated. A field trial was conducted using oil contaminated beach sediments from Pulau Semakau – a small island 15 km south of Singapore. The results clearly show that the addition of inorganic nutrients to beach sediments significantly enhanced the activity of indigenous microorganisms (measured using the dehydrogenase enzyme assay and viable cell count techniques), as well as the removal of total recoverable petroleum hydrocarbons (TRPH) over a 50-day study period (with up to 44% in the case of nutrient addition). The potential of exploiting in-situ bioremediation techniques for oil spill clean-up operations in tropical marine environments is discussed.     

Food preferences of an insular population of Rattus rattus

The food preferences of an insular population of Rattus rattus inhabiting colonies of the Short-tailed shearwater Puffinus tenuirostris are described from results obtained during analyses of stomach contents and droppings collected from Big Green Island, Furneaux Group, Tasmania. It was found that rats on the island maintained themselves by eating a predominantly vegetarian diet and results suggest that there was some selective feeding on monocotyledons rather than the dicotyledons present in the area. Green parts of plants were taken throughout the year and rats may select these as a water source during the summer months. Plants made up 77.2% of the 254 stomach contents analysed and of this 57.7% was green material. Insect remains were found in 24.8% of the 1400 droppings examined and made up 14.3% of the stomach contents. Few feathers of the shearwater Puffinus tenuirostris were found in the stomachs or droppings and preliminary behavioural experiments suggested that the rat does not actively predate the bird though it may remove unattended eggs and eat dead chicks.     

Patterns in size and shedding of Fasciola hepatica eggs by naturally and experimentally infected murid rodents

Using samples collected on the island of Corsica, a comparative study was done of the morphometry of Fasciola hepatica eggs shed by cattle and by naturally and experimentally infected murid rodents (wild Mus musculus and Rattus rattus and Rattus norvegicus Wistar laboratory strain). Eggs shed by murids are smaller in size than those shed by naturally infected cattle. A second study analyzed the number of F. hepatica eggs shed in murid feces at different time intervals, i.e., months, days, and 6-hr periods, by the Kato-Katz technique. Both experimentally and naturally infected black rats (R. rattus) were used, and Wistar rats were experimentally infected and included for comparison. The present studies prove that black rats R. rattus are able to shed eggs independently from the liver fluke isolate and that egg shedding occurs throughout the life of this host species, uninterrupted during all the months analyzed in a 2-yr period. Moreover, the results suggest that this shedding is continuous, with eggs appearing in the feces daily. The results on egg shedding by wild black rats R. rattus reach their maximum shedding in spring and autumn and a maximum during twilight hr. These chronobiological patterns appear to favor parasite transmission, both seasonally and daily.     

岛屿生境下黄毛鼠种群的遗传变异

岛屿具有独特的生态系统,常被生态学家和进化生物学家视为研究生物进化的天然实验室,岛屿生物地理学也受到了越来越多科学家的关注。对舟山群岛8个面积不等岛屿的黄毛鼠(Rattus losea)种群进行了调查,分析了8个种群的遗传变异特征,对探讨岛屿理论中的种群动态和种群分化具有重要意义。采用线粒体分子标记技术,利用PCR扩增得到D-loop区基因序列815 bp,在330个黄毛鼠样本中共识别出15个单倍型,平均核苷酸多样性(P_i)为0.001,平均单倍型多样性(H_d)为0.364,表明舟山群岛黄毛鼠种群的遗传多样性较低。Tajima′s D中性检验显示除了小盘峙种群,均为显著负值(P0.01),表明种群受到了自然选择的作用,历史上发生过种群扩张。AMOVE显示,群体间的遗传分化指数平均值为0.745,处于较高的分化水平,表明遗传变异主要来自种群间,占74.5%。基于线粒体D-loop区序列构建的系统发育树和中值网络都表明8个岛屿的黄毛鼠种群起源于两个母系。此外,Mental检验显示不同岛屿种群间的遗传距离与岛屿间地理距离之间存在显著正相关关系(r=0.6077,P=0.004),种群遗传多样性与岛屿面积并未发现显著相关性(r=0.6255,P=0.1840)。研究结果可为岛屿黄毛鼠种群的微观演化以及一些岛屿物种的进化理论提供参考。     

Helminths from introduced small mammals on Kerguelen, Crozet, and Amsterdam Islands (southern Indian Ocean).

Four monoxenous nematodes and 1 heteroxenous cestode were found in 4 species of introduced small mammals on isolated sub-Antarctic islands of the Indian Ocean. In the Kerguelen Archipelago, Syphacia obvelata, Passalurus ambiguus (Nematoda: Oxyuridae), and Rodentolepis straminea (Cestoda: Cyclophyllidae) were respectively found in the house mouse Mus musculus, the rabbit Oryctolagus cuniculus, and the black rat Rattus rattus. One accidental nematode, Trichostrongylus sp. (Nematoda: Trichostrongylidae), was also found in a black rat on Kerguelen. On Possession Island (Crozet Archipelago), R. straminea was present in the black rat. On Amsterdam Island, the brown rat R. norvegicus harbored 2 species, R. straminea and Nippostrongylus brasiliensis (Nematoda: Heligmonellidae). The small number of founder hosts and the depauperate terrestrial communities on these remote islands explain the low diversity in the helminth communities of these introduced mammals compared with continental populations.     

浙江海岛鸟兽地理生态学的初步研究

对浙江洞头岛及舟山五岛的鸟兽调查表明,海岛动物的种数较相邻大陆为低,但种群密度却高于大陆,岛上的某些种类出现生态位扩展的现象。舟山五岛兽类的种数和岛屿面积呈正相关,其关系式为S=2.12A~(0.29),但种群密度随着岛屿面积的增大而下降。文中据此提出了保护和发展岛屿动物资源的某些措施。