Protein analysis by isoelectric focusing in a capillary array with an absorption imaging detector

Isoelectric focusing (IEF) was successuflly performed in capillary arrays with up to four capillaries. Separated proteins in the capillary array were detected by an UV absorption imaging detector. The whole analysis time for all samples in the capillary array was only 3 min due to the real-time imaging detector. The instrument was applied to analyse several protein samples including different human hemoglobin variants, myoglobin, transferrin, carbonic anhydrase and a monoclonal antibody to fluorescein. Because of good reproducibility of the focused pattern, unknown samples can be run simultaneously with a standard in the multichannel instrument and the components of unknown samples can be identified by comparing their zone positions to those of the standard. Minor components can be determined by the instrument in the presence of major components with 100 times higher concentrations in human hemoglobin samples. This instrument could be a powerful analytical tool for clinical analysis and for quality control in pharmaceutical companies.     

Identification of chromosome regions controlling seed storage proteins of narrow-leafed lupin (Lupinus angustifolius)

Narrow-leafed lupin (Lupinus angustifolius L.) is a valuable legume crop for animal feed and human health food because of its high proteins content. However, the genetics of seed storage proteins is unclear, limiting further improvement of protein quantity and quality. In this study, matrix-assisted laser desorption/ionization time of flight mass spectrometry was used for the first time to analyze lupin seed storage proteins and the spectra generated was treated as markers to investigate the chromosome locations controlling seed storage proteins in the narrow-leafed lupin. In a recombinant inbred line population of 89 individuals, 48 polymorphic protein peaks were identified and seven of which were successfully mapped onto four existing linkage groups: two on NLL-04, three on NLL-05, one on NLL-07 and one on NLL-14, with LOD values ranging from 2.6 to 7.7 confirming a significant linkage. Most protein-based markers showed distorted segregation and were failed to be integrated into the reference map. Among them, 31 were grouped into six clusters and the other ten were totally unlinked. This study provides a significant clue to study the comparative genomics/proteomics among legumes as well as for protein marker-assisted breeding. The distribution pattern of genes controlling seed storage protein revealed in this study probably exists universally among legumes or even all plants and animals. Whether genes controlling seed storage protein share the same gene expression pattern controlling other enzymes and what is the mechanism behind it are the questions which remain to be answered in the future.     

BiP, HSP70, NDK and PDI in wheat endosperm. I. Accumulation of mRNA and protein during grain development

Biosynthesis and accumulation of seed storage proteins such as the wheat glutens depend on the activity of a variety of other proteins, including chaperones and foldases. cDNA probes and antibodies to two chaperone proteins and a foldase were used to follow mRNA and protein accumulation in developing grains of wheat ( Triticum aestivum , cvs Cheyenne and Butte). Endosperm was separated from other grain components and protein accumulation was analyzed on a per mg fresh weight basis. The ER resident chaperone BiP (binding protein) and foldase PDI (protein disulfide isomerase) accumulated to maximal levels in the middle stage of endosperm development, a period of rapid cell expansion and storage protein accumulation, whereas levels of a cytosolic chaperone, HSP70, remained relatively constant throughout grain development. In contrast, nucleoside diphosphate kinase (NDK), a cytosolic enzyme needed for synthesis of nucleoside triphosphates, accumulated early in endosperm development during the period of nuclear division and cell formation. When analyzed as a fraction of total protein the relative abundance of all four proteins peaked early in grain development and then declined. Accumulation of mRNA for the four proteins also peaked early in grain development. Although BiP and PDI formed a declining percentage of total protein as storage protein accumulated, their pattern of accumulation was compatible with a proposed role as catalysts for storage protein folding and accumulation in the ER.     

Spatial distribution of proteins and metabolites in developing wheat grain and their differential regulatory response during the grain filling process

Grain filling and grain development are essential biological processes in the plant’s life cycle, eventually contributing to the final seed yield and quality in all cereal crops. Studies of how the different wheat (Triticum aestivum L.) grain components contribute to the overall development of the seed are very scarce. We performed a proteomics and metabolomics analysis in four different developing components of the wheat grain (seed coat, embryo, endosperm, and cavity fluid) to characterize molecular processes during early and late grain development. In-gel shotgun proteomics analysis at 12, 15, 20, and 26 days after anthesis (DAA) revealed 15 484 identified and quantified proteins, out of which 410 differentially expressed proteins were identified in the seed coat, 815 in the embryo, 372 in the endosperm, and 492 in the cavity fluid. The abundance of selected protein candidates revealed spatially and temporally resolved protein functions associated with development and grain filling. Multiple wheat protein isoforms involved in starch synthesis such as sucrose synthases, starch phosphorylase, granule-bound and soluble starch synthase, pyruvate phosphate dikinase, 14-3-3 proteins as well as sugar precursors undergo a major tissue-dependent change in abundance during wheat grain development suggesting an intimate interplay of starch biosynthesis control. Different isoforms of the protein disulfide isomerase family as well as glutamine levels, both involved in the glutenin macropolymer pattern, showed distinct spatial and temporal abundance, revealing their specific role as indicators of wheat gluten quality. Proteins binned into the functional category of cell growth/division and protein synthesis/degradation were more abundant in the early stages (12 and 15 DAA). At the metabolome level all tissues and especially the cavity fluid showed highly distinct metabolite profiles. The tissue-specific data are integrated with biochemical networks to generate a comprehensive map of molecular processes during grain filling and developmental processes.     

A multivariate analysis of fatness and relative fat patterning.

Skinfold measurements (triceps, subscapular, suprailiac and medial calf) in four samples (376 boys, 352 girs, 338 men and 380 women from rural Colombia) were subjected to principal components analysis to identify components of obesity and relative fat patterning. Three components emerged which were similar in the four samples: a first component of fatness explaining 70-80% of the variance and two fat pattern components each explaining 10-15% of the variance: trunk-extremity and upper-lower body. Fatness and the trunk-extremity pattern components changed with age in children (7-12 years), but none of the components changed with age in adults (25-60+). The fatter tended to be more patterned in both age groups. Canonical correlation analysis revealed that socioeconomic status was more related to fatness than to patterning. With the exception of brothers, all first degree relatives (sib, parent-off-spring) and spouses were correlated in fatness. Some of the correlations between relatives--usually sibs, but not spouses--were also significant for the pattern components, suggesting a genetic basis for the known stability of this characteristic (Garn, '55a). Principal components analysis is a useful multivariate alternative for quantitative studies of anthropometric patterning.     

The haemoglobins of Labeo umbratus (Smith) and Labeo capensis (Smith)

The haemoglobins of both L. umbratus and L. capensis separated into four components on polyacrylamide electrophoresis. The isoelectric points of these fractions were found to be 9.35, 6.89, 6.63 and 6.40. Organic nucleotide triphosphate concentration in the blood of L. capensis was found to be 56.72 ± 18.01 mg% and 58.72 ± 17.9 mg% in the case of L. umbratus . It is not possible to distinguish between L. umbratus and L. capensis purely on the basis of the haemoglobin electropherogram.     

Genetic diversity study of some medicinal plant accessions belong to Apiaceae family based on seed storage proteins patterns

Cumin (Cuminum cyminum L.), Fennel (Foeniculum vulgare L.) and Longleaf (Falcaria vulgaris Bernh) that all belong to Apiaceae family as medicinal plants are very important in many countries. Study of genetic diversity for medicinal plant is important for researches in future. One of the methods to evaluate plant genetic diversity and classification of them is the electrophoresis of seed storage proteins. This research was conducted in order to evaluate seed protein variability in different Iranian Cumin, Fennel and Longleaf accessions and grouping them based on these proteins as a biochemical marker. For this purpose, the samples were first powdered in liquid nitrogen and seed protein was extracted with extraction buffer. Then total soluble proteins were resolved on 12.5?% sodium dodecyl sulphate polyacrylamide gel electrophoresis gels. The electrophoretic protein pattern showed 38 bands that were low polymorphism among the accessions. The result of cluster analysis showed that the accessions were classified in three groups (all 29 Cumin accessions in the first group, three Fennel ecotypes in second group and three Longleaf accessions in the last one).     

Analysis of dynamic protein carbonylation in rice embryo during germination through AP‐SWATH

Seed germination is an important aspect of the plant life cycle, during which, reactive oxygen species (ROS) accumulate. The accumulation of ROS results in an increase in protein oxidation of which carbonylation is the most canonical one. However, there is insufficient information concerning protein oxidation, especially carbonylation and its contribution to seed germination. In this study, biotin hydrazide labeled chromatography combined with sequential window acquisition of all theoretical fragment ion spectra (SWATH) method was used to analyze the dynamic pattern of protein carbonylation in rice embryos during germination. A total of 1872 unique proteins were quantified, among which 288 carbonylated peptides corresponding to 144 proteins were determined based on the filtering through mass shifts of modified amino acids. In addition, 66 carbonylated proteins were further analyzed based on their carbonylation intensity in four stages of germination. These identified carbonylated proteins were mainly involved in maintaining the levels of ROS, abscisic acid and seed reserves. Remarkably, a peroxiredoxin was found with 23 unique carbonylated peptides, and the expression of which was consistent with its increased activity. This study describes the dynamic pattern of carbonylated proteins during seed germination, and may help to further understand the biochemical mechanisms on this process.     

Growth-form regulates the altitudinal variation of interspecific seed mass of woody plants in Mt. Dalaoling,the Three Gorges Region,China

Aims Seed size is one of the most important characteristics of plant seeds, and has significant implications in plant ecological functions. Exploring the altitudinal pattern of seed size would help to detect environmental constraints on species distribution and understand the linkage between plant ecological function traits Methods The present study measured the quantitative features of seed size, including weight of 1 000 grain seeds, lengths of longer and shorter axes, and analyzed the relationships between seed size and altitude, as well as the influence of growth form. Seed samples were all collected from 201 locally common woody plants (belonging to 59 families and 87 genera) in the Dalaoling Natural Reserve in Yichang City, Hubei Province.Important findings Measured values of the seed mass, the longer axis, and the shorter axis of the 201 woody plant species all follow the lognormal distribution. Measurements of seed mass vary across five orders of magnitude. Significant correlation was found between seed mass, seed length of the longer and shorter axes (R² = 0.755; 0.819; 0.630, p < 0.01). Moreover, seed mass of trees and small trees are significantly heavier than those of shrubs and woody vines. Seed mass values of evergreen broad leaved species are significantly heavier than those of deciduous broad leaved species and needle leaved species. Seed mass of all 201 species shows a slightly but statistically significant decreasing trend with the increase of altitude. In addition, altitudinal patterns of seed mass varied between species with different growth form. Our results indicated the variation of altitudinal trends of seed mass for different structural components of plant communities, implying the local community structure as a critical aspect of variation in macro-ecological patterns.     

Growth-form regulates the altitudinal variation of interspecific seed mass of woody plants in Mt. Dalaoling,the Three Gorges Region China北大核心CSCD

Aims: Seed size is one of the most important characteristics of plant seeds, and has significant implications in plant ecological functions. Exploring the altitudinal pattern of seed size would help to detect environmental constraints on species distribution and understand the linkage between plant ecological function traits. Methods: The present study measured the quantitative features of seed size, including weight of 1 000 grain seeds, lengths of longer and shorter axes, and analyzed the relationships between seed size and altitude, as well as the influence of growth form. Seed samples were all collected from 201 locally common woody plants (belonging to 59 families and 87 genera) in the Dalaoling Natural Reserve in Yichang City, Hubei Province. Important findings: Measured values of the seed mass, the longer axis, and the shorter axis of the 201 woody plant species all follow the lognormal distribution. Measurements of seed mass vary across five orders of magnitude. Significant correlation was found between seed mass, seed length of the longer and shorter axes (R2 = 0.755; 0.819; 0.630, p > 0.01). Moreover, seed mass of trees and small trees are significantly heavier than those of shrubs and woody vines. Seed mass values of evergreen broad leaved species are significantly heavier than those of deciduous broad leaved species and needle leaved species. Seed mass of all 201 species shows a slightly but statistically significant decreasing trend with the increase of altitude. In addition, altitudinal patterns of seed mass varied between species with different growth form. Our results indicated the variation of altitudinal trends of seed mass for different structural components of plant communities, implying the local community structure as a critical aspect of variation in macro-ecological patterns.     

甜荞不同品种不同海拔地区种子蛋白组分含量研究

该研究通过分析甜荞10个品种在4个不同海拔栽培的种子蛋白质组分(清蛋白、球蛋白、醇溶蛋白和谷蛋白)的含量变异,以揭示不同荞麦品种之间以及不同栽培地点甜荞种子蛋白组分的变异规律。结果表明:在所有甜荞品种种子蛋白组分含量中清蛋白谷蛋白球蛋白醇溶蛋白。其中,种植于海拔最低的内蒙古通辽的甜荞种子平均球蛋白含量最高(1.081%),而种植于海拔1 450 m的河北甜荞谷蛋白平均含量最高(2.805%);海拔2 620 m的青海甜荞清蛋白平均含量为4.750%,而在海拔最高的西藏日喀则收获的甜荞种子的醇溶蛋白最高(平均为0.393%)。另外,蒙0530在4个地区的平均种子清蛋白和谷蛋白含量都最高,而球蛋白含量最高的品种是赤甜荞1号,定甜荞2号的种子醇溶蛋白含量最高。双因素方差分析表明,种子清蛋白含量品种间变异达极显著水平,不同地点间的种子醇溶蛋白含量达极显著水平,而地点和品种两个因素对种子球蛋白含量和谷蛋白含量的变异都有极显著影响。相关性分析表明,赤甜荞1号的醇溶蛋白含量与海拔呈显著正相关,蒙0530的球蛋白含量与海拔呈显著负相关,其他品种蛋白组分与海拔的相关性不显著。该研究结果对于甜荞优质品种培育和栽培以及推广都有一定的指导意义。     

Heritable Variation in a Polypeptide Subunit of the Major Storage Protein of the Bean, Phaseolus vulgaris L

Electrophoretic analysis of the major seed protein, G1 globulin, from four strains of Phaseolus vulgaris L. revealed a three-banded pattern for two strains having a high methionine content (BBL 240 and PI 302,542). The other two strains (PI 207,227 and PI 229,815) known to have a lower seed methionine content, had a two-banded subunit pattern for the G1 globulin. Analytical ultracentrifugation confirmed that globulin from the two-banded strains underwent pH-dependent reversible dissociation similar to that previously found for a three-banded cultivar; additionally, the protomer molecular weight showed that three subunits of about 50,000 molecular weight each were present in the G1 globulin of the two-banded strain. Gel patterns of G1 globulin from the two strains used as parents, BBL 240 and PI 229,815, showed differences in the largest subunit, which appeared as either a 53,000 molecular weight polypeptide known to be present in the three-banded strain, or as a shorter polypeptide having a molecular weight close to 47,000. Analysis of G1 protein from portions of single hybrid seeds showed a banding pattern intermediate between the two- and three-banded types. The subunit pattern from all seeds with intermediate-banded parents segregated in a manner consistent with that expected for control of the polypeptide by a single Mendelian gene. The remaining portions of the seeds were grown to confirm that they represented true crosses. The procedures used are essentially nondestructive, and can be used as a basis for selecting seeds having different protein characters.     

Relationships of the Gymnosperms and Angiosperms Estimated on the Basis of Data Obtained by Biochemical Methods

The phylogenetic relationships of gymnospermous and angiospermous plants were studied. To this end, 13 antisera to seed proteins of plant taxa representing all the four classes of the gymnosperms were obtained. The antigens used in immunochemical reactions with these antisera included the proteins of 134 seed samples representing 91 families from all the 11 subclasses of dicotyledons and 64 seed samples representing 33 families from five out of six classes of monocotyledons (according to Takhtajan, 1996). Immunochemical analysis was performed by the methods of double immunodiffusion in agar gel (two variants) and immunoelectroblotting. In addition, some samples of seed proteins were analyzed for amino acid composition. The results corroborate the concept that the seed plants are a monophyletic taxon. The angiosperms apparently originated from a progymnospermous ancestor or branched from the main stem of gymnosperms prior to its division into the recent phyla. No common ancestor of all subclasses of the angiosperms has been identified.     

花生种子的发育与贮藏蛋白质的合成和积累

花生果针入土后16天(16 DAP),种子干重和鲜重开始迅速增加。整个发育阶段可分为5个时期:组织分化期(0～20 DAP)、成熟前期(21～28 DAP)、成熟中期(29～40DAP)、成熟中后期(41～62 DAP)和成熟后期(63～88DAP)。种子发芽率在成熟前期和中期迅速提高并到达最大值,而苗成活率在成熟中后期达到最大值,苗鲜重则以88 DAP种子的为最大。种子发育过程中,贮藏蛋白质的合成与积累模式与种子干重变化相似。SDS-PAGE分析表明,种子发育初期(16 DAP)子叶中已积累花生球蛋白和伴花生球蛋白I。双向凝胶电泳显示花生球蛋白各个亚基在20DAP时均已存在,伴花生球蛋白I的主要亚基在整个发育过程中其等电点有所变化,含量也逐渐增加。其他蛋白质在种子发芽力形成阶段(20～40 DAP)的变化较为显著。     

Diversity in capsule and seed morphological and phytochemical features and essential oil composition of korarima (Aframomum corrorima (braun) P. C. M. jansen) collections from Ethiopia

Korarima (Aframomum corrorima (Braun) P. C. M. Jansen) is one of the Ethiopian native perennial aromatic herbs belonging to the family Zingiberaceae. Conservation of genotypes and genetic improvement of korarima has been hampered due to lack of evidences on genetic diversity of korarima. Genetic diversity of 44 korarima collections was assessed based on joint capsules and seeds morphological and phytochemical characters. Chemical composition of essential oil in seed samples has also been investigated. Physical measurements were done manually while total organic nutrients, crude fiber and total ash in the seeds were done in terms of proximate analysis. Essential oil in the seed samples was extracted by hydro-distillation and its chemical composition was analyzed with gas chromatography and mass spectrometry (GC-MS). ANOVA revealed significant variations in all the variables considered except capsule and seed shape. Ayda collections showed the largest record for fresh capsule weight (25.3 g), dry capsule weight (6.6 g), hundred seed weight (2.8 g), seed to husk ratio (2.1), total organic matter (66.6%) and seed essential oil (7.3%). Collection from Bazet was also excellent in dry weight of seed per capsule (4.45 g) while those from Metser were best in fruit husk essential oil (1.45%). Cluster analysis of the 44 collections revealed four groups each showing large (23.82–280.13) and significant (p < 0.01) pairwise genetic distance. The pattern of grouping is weak and does not match with the region of collections indicating the presence of different genetic background within the collections as well as genetic similarity among the collections. Principal component analysis (PCA) revealed about 81.2% of the total variations in the first four PCs and the pattern of grouping is similar to cluster analysis. In Essential oil composition, Bona Kike collection was remarkable in 1, 8-Cineole (60.81%). Ayda collection showed the highest m-Mentha-1,8-diene, (+)- (10.05%) and β-farnesene (24.03%). Adele Bise collection was highest in D-Limonene (20.21%). The genetic variability in essential oil composition among the samples was revealed because of spatial separation. The result suggests the potential of Ethiopian korarima in general and the collections in particular for further improvement and commercialization. Overall, the higher extent of morphological and biochemical genetic diversity observed signpost the high opportunity for genetic improvement of the crop via hybridization and selection.     

Plasticity of reproductive components at different stages of development in the annual plant Thlaspi arvense L.

Summary This study examines the effect of different densities and the removal of all neighbours at different stages of development on all components of reproduction in the inbreeding annual Thlaspi arvense L. A 64-fold increase in density significantly reduced all repooductive components. The number of flower buds per plant was decreased most strongly; the order of decreasing plasticity among the other components was number of capsules per flower, individual seed weight, ovule number per capsule, flowers per flower bud and seeds per ovule. Removing neighbours at all stages of development increased seed yield of plants in comparison to the control without density reduction, but patterns of plasticity depended strongly on time of treatment. The main effect of the removal of neighbours at the vegetative stage was to increase the number of flowers per plant, but the number of ovules per capsule and seed weight increased also, and abortion of capsules decreased. Removing neighbours at the onset of flowering initially failed to affect flower number per plant, instead it resulted in a strong reduction of capsule abortion and an increase in seed weight. However, several weeks after flowering had initially ceased, fresh lateral inflorescences were produced, resulting in a second flush of reproduction. Removing neighbours at the stage of fruit ripening resulted at first only in an increase in seed witht, but later a second reproductive phase occurred. Fresh lateral branches were produced, but the apical meristem was also reactivated. The overall pattern of plasticity among all reproductive components in response to a removal of neighbours was the same as in response to density. The position of a capsule along the inflorescence influenced its number of ovules, the rate of seed abortion and the mean weight of seeds, with the type of effect depending on the developmental stage at which neighbours were removed. Significant negative correlations were found between the mean weight of seeds and the number of seeds in a capsule under all treatments.     

The importance of green seed in the nitrogen nutrition of the Zebra Finch Taeniopygia guttata

Abstract Australian grass-finches are widely reported to consume large quantities of green seed when it becomes available, and the opportunistic breeding of wild Zebra Finches in the arid zone has been correlated with the occurrence of rain. In this study, green and ripe seeds were harvested from seven pasture and weed grasses grown in experimental plots and, along with three cereal flours and whole-egg powder, were analysed for the amino-acid composition of their protein. The relative levels of ten amino acids essential in the diets of growing birds were compared between samples using a cluster analysis dendrogram generated from Raabe's Similarity Index. The protein of all green seeds clustered with whole egg, and away from all but one of the ripe seeds and seed products. Green and ripe seed profiles were found to be significantly different by a two-sample multivariate test of significance (Hotelling's T²). Histidine, lysine, phenylalanine and threonine were the amino acids most different. Of these four amino acids, lysine and threonine (along with methionine) were potentially limiting in ripe seeds when compared with whole-egg protein. In green seeds, lysine was only marginally limiting, threonine was no longer limiting, but methionine was still limiting when compared with whole-egg protein. These results indicate that the benefit of green vs ripe seed in the diet of breeding Zebra Finches is partly a higher level of the limiting essential amino acid, lysine, and partly a higher intake and throughput of soft green seed and consequent greater extraction of limiting essential amino acids.     

Differences in plastic responses to defoliation due to variation in the timing of treatments for two species of Sesbania (Fabaceae)

BACKGROUND AND AIMS: Plastic responses to stress in components of reproduction can have important effects on plant fitness and can vary both within and between species. Responses may also depend on when in the life cycle stress occurs. Here, it is predicted that the timing of initiation of a stress, defoliation, would affect the pattern of plastic responses. These differences should occur because some components of reproduction, such as flower number, are determined earlier in a plant's life than others, such as individual seed mass. METHODS: To test this prediction, 50 % artificial defoliation treatments were initiated at four different times for Sesbania macrocarpa and S. vesicaria. Responses were measured in plant size, number of flowers, number of flowers/plant size, fruit set, number of seeds per fruit, individual seed mass and total seed mass per plant. KEY RESULTS: For S. vesicaria, changes in the timing of stress changed the severity, but not the pattern of response. For S. macrocarpa, plastic responses to defoliation varied strikingly between early and late treatments. Late treatments resulted in over-compensation in this species. Sesbania macrocarpa was generally more plastic than S. vesicaria and the species showed opposite responses for most components of reproduction. CONCLUSIONS: While there were effects of timing of defoliation and differences between species, the nature of these effects did not precisely fit our predictions. Our results suggest that differences in the length and flexibility of the life cycles of the two species allowed for unexpected variation in responses. For example, because flower production continued after the last treatment in S. vesicaria, responses were not constrained to reductions in individual seed mass.     

Comparative proteomic analysis of planktonic and immobilized Pseudomonas aeruginosa cells: a multivariate statistical approach

The protein maps of Pseudomonas aeruginosa cells from two natural (attached) and one artificial (gel-entrapped) immobilized-cell (IC) systems, together with their free (suspended) counterparts, were compared after incubation for 18 or 48 h in a minimal salt medium. Principal component analysis (PCA) was used to interpret the variations in protein spot densities that were observed on electropherogram obtained by two-dimensional electrophoresis (2-DE). PCA of the 2-DE data, a matrix of 933 rows (observations, i.e., spot density values) and 12 columns (variables, i.e., incubation conditions), in which observations were standardized horizontally, extracted four principal components (PCs) accounting for 78.75% of the variability in the protein expression profiles. PC1 opposed the two modes of growth (planktonic and immobilized) while PC2 discriminated between the incubation times of free cell cultures. The incubation conditions of ICs, including the immobilization procedure (entrapment vs attachment) and the nature of the biofilm substratum, were fairly separated in PC3xPC4. The dependence of the protein patterns on the cell immobilization process was further illustrated by the identification of a number of peptides whose amount remained unchanged or was altered in ICs compared to free bacteria. These results reinforce the topical assertion that bacteria in the immobilized state display a specific physiological behavior but also question the existence of a unique IC phenotype.