Trends in water quality and subtidal benthic communities in a temperate estuary: Is the response to restoration efforts hidden by climate variability and the Estuarine Quality Paradox?

The analysis of temporal patterns in water quality and benthic assemblages in estuaries constitutes an important methodological issue for discriminating the effects of natural and anthropogenic pressures. Temporal trends in water quality and in the subtidal benthic community over a 5-year interval in the Mondego estuary (Portugal) were investigated with the aim of assessing changes in environmental quality as a response to restoration efforts and climate variability. Particularly, we addressed the following questions: (a) Would trends in water quality and benthos behave consistently over the whole study period for the different zones of the monitoring network and indicate improvement or degradation in ecological condition? (b) Could we distinguish the effects of climate variability and restoration efforts in water quality and benthos from trend analysis results? (c) Could the response of the benthic communities and water quality be useful to guide the planning of future management actions in this system?Clear cause–effect relationships regarding the ecological response to restoration efforts and climate variability were indeed challenging to identify and interpret. In fact, the response of water quality and benthic communities to restoration efforts seemed to have been masked by the effects of climatic variability. Furthermore, the present study illustrated clearly the high environmental variability inherent to estuarine systems and the difficulty of clearly distinguishing natural from anthropogenic stressors, in agreement with the “Estuarine Quality Paradox”. Implications for ecological quality assessment and management of the Mondego estuary and other poikilohaline systems are discussed, namely with regard to the “one-out, all-out” principle required by the European Water Framework Directive (WFD).     

A biological trait approach to assess the functional composition of subtidal benthic communities in an estuarine ecosystem

Within transitional/estuarine environments ‘ecosystem functioning’ has been mostly investigated with “traditional” taxonomic analysis, based on the taxonomic composition of benthic invertebrate communities. However, ‘ecosystem functioning’ depends also greatly on the functional characteristics (biological traits) of organisms.It was a priori suggested that the biological traits of the subtidal benthic invertebrate communities within an estuarine environment would respond to the high variability of environmental pressures (natural and human induced) within this type of ecosystem.For this study, traditional taxonomic analysis (species richness, species density and Shannon–Wiener diversity) as well as biological trait analysis were used together for the first time to investigate the response of the subtidal benthic invertebrate communities to the environmental pressures within the Mondego estuary (Portugal).Biological trait analysis, in addition to traditional taxonomic analysis provided a more comprehensive understanding of the functioning within this type of ecosystem. Some of the most important outcomes are: (i) the trait “salinity preference” was the most important trait that distributed the species along the estuary, (ii) the central part of the estuary appeared to be under higher environmental stress levels than the other areas, as suggested by a dominance of some “opportunistic” traits (e.g. small short-lived species), (iii) the ratio between functional diversity (FD) and Shannon–Wiener diversity (H′) indicated lower functional redundancy at the upper reaches of the estuary. Our results, suggest that the ratio (FD/H′) might be a helpful tool to visualize this functional attribute and could potentially be applied to different communities from distinct environments. Using the traditional taxonomic analysis alone, this last functional aspect would not be detectable. Therefore, the inclusion of biological traits analysis is recommendable for estuarine ecological studies.     

A benthic perspective in assessing the ecological status of estuaries: The case of the Mondego estuary (Portugal)

In transitional waters the process of defining reference conditions (in the scope of the WFD) must account for the natural great variability of such environments. Therefore, stretches reflecting different physical–chemical and biological conditions throughout the system should be defined in order to correctly establish benthic specific reference conditions. Both salinity and sediment structure are major factors controlling physical–chemical conditions and therefore organisms’ distribution within an estuary. These environmental variables (salinity, sediment grain size composition and organic matter content) patterns were studied in the Mondego estuary and some clear gradients emerged. Also, ecological indices (AMBI, Margalef and Shannon-Wiener) were applied to subtidal benthic communities of the Mondego estuary and, generally, there was not only evidence of a decrease in diversity in the estuary from the downstream section towards its inner parts, but also differences were found between areas of distinct sediment composition. After comparing environmental patterns with biodiversity trends, the information was used to define homogeneous sectors along a temperate estuary in Portugal. In the Mondego estuary six zones, covering the main physical gradients affecting benthic communities, were defined: four in the northern arm and two in southern arm. Zones established will allow future determination of benthic reference conditions adjusted for each of the sectors, according to their characteristics, and consequently the conditions they provide for benthic assemblages settlement.     

Using species traits to assess human impacts on near shore benthic ecosystems in the Canadian Arctic

Human activities have the potential to alter the diversity and composition of biological communities in natural environments, which can cause changes in ecosystem functioning. This has led to the development of environmental assessment techniques that take into account species identity, as species can contribute differently to various ecosystem processes. Biological Traits Analysis (BTA) is used to compare the abundances of specific biological traits in samples to produce information about how ecosystem functioning may change across a specific terrestrial or aquatic system. In the present study, BTA was used to assess the influence of municipal wastewater effluent on benthic marine communities in near shore soft sediments in four locations across the Canadian Arctic Territory of Nunavut, Canada. Shifts in trait composition were assessed relative to indicators of sediment enrichment (sediment chlorophyll, organic content, degree of anoxia), and natural variation in habitat characteristics (water depth, porosity, average grain size) at a site receiving wastewater and a reference site in each sampling location. The results indicated a mild enrichment effect of wastewater, as evidenced by changes in trait composition at three of the four sites that received wastewater inputs. However, the amount of variance in trait composition explained by metrics of wastewater enrichment in these locations were generally equal to or lower than the amount of variance explained by sediment characteristics related to natural processes. These results provide greater insight into the underlying causes and consequences of human activities than more traditional methods for environmental impact assessment, and can be directly applied in a management context.     

The performance of trait-based indices in an estuarine environment

The performance of several indices of benthic functioning, based on the traits of estuarine macro-invertebrates, was tested in the lower Mondego estuary (Portugal), whose two arms exhibit different disturbance levels related to hydromorphology. The results showed that some indices responded clearly to this type of disturbance and others not so well. We argue that the community-weighted mean trait values (CWM) in combination with the newly developed SR-FRED index provided the best overall picture of how the benthic communities might have been affected by hydromorphological disturbance. This study also showed that certain indices should be used with caution when dealing with communities with few and dominant species, such as in estuarine environments.     

Dynamic changes in seagrass assemblages under eutrophication and implications for recovery

Over the last 20 years, loss of seagrass beds, often related with increased eutrophication, became a common problem worldwide. In the Mondego estuary (Portugal), eutrophication has triggered serious biological changes, which led to an overall increase in primary production and to a progressive replacement of seagrass Zostera noltii beds by coarser sediments and opportunistic macroalgae.The effects of this eutrophication on benthic assemblages were studied along a spatial gradient in the Mondego estuary from 1993 to 1995. Over these short temporal and small spatial scales, distinct changes in the structure of the macrobenthic communities were observed. One of the main structural modifications was the decrease in species diversity along the eutrophication gradient and over time, with a marked impoverishment of the most disturbed inner area. Other changes included an increase in detritivores and a decline in herbivores together with a significant increase in small deposit-feeding polychaetes.In the long term, sustained eutrophication of this estuary is expected to lead to complete replacement of seagrass habitat by unvegetated coarser sediments, occasionally covered by green macroalgal blooms and dominated by opportunistic invertebrate taxa. Recovery from this situation may not only require reduction in nutrient loadings to the estuary, but also active seagrass restoration programmes to reverse the positive feedback processes thought to be presently taking place.     

Subtle population structure and male-biased dispersal in two <Emphasis Type="Italic">Copadichromis</Emphasis> species (Teleostei,Cichlidae) from Lake Malawi,East Africa

Marine protected areas are generally designed and managed on the basis of the presence and extent of specific habitat types or the habitats of important species. However, it has become clear that in addition to including these ‘structural’ elements of marine systems, management strategies should incorporate a consideration of the functional aspects of the ecosystems. Biological traits analysis (BTA) has been successfully used to describe ecological functioning in marine benthic systems. BTA uses a number of biological characteristics expressed by the taxa present as indicators of key ecosystem functions. Two expert workshops were used to examine the potential for the application of BTA in the designation and management of MPAs. They concluded that BTA represented the best tool currently available for quantifying ecological functioning and agreed on 10-key ecological functions delivered by marine benthic communities. Twenty-four biological traits were also identified by the workshops as indices of these ten functions. In order to demonstrate the practical utility of the approach, BTA using these traits, was applied to a dataset covering benthos from within and around the proposed Eddystone Special Area of Conservation (SW England). The case study demonstrated that with the type of data normally available from conservation assessment type surveys, and a knowledge of the relevant biological traits, it is possible to use a consideration of ecological functioning to set boundaries for the MPA and to inform the site management objectives. The use of structure and function information to inform the designation process and subsequent management of marine protected areas is discussed. Guest editors: J. Davenport, G. Burnell, T. Cross, M. Emmerson, R. McAllen, R. Ramsay & E. Rogan Challenges to Marine Ecosystems     

Learning from the past: functional ecology of marine benthos during eight million years of aperiodic hypoxia,lessons from the Late Jurassic

Deoxygenation has profound effects on marine biota and delivery of ecological functions in benthic systems. Globally, coastal and oceanic hypoxia is rapidly increasing due to anthropogenic activities including climate change and eutrophication. Little is known about the response of marine ecosystems to deoxygenation over long timescales and the consequences this will have for functioning. This study presents results from biological traits analysis (BTA) of 21 time averaged benthic palaeocommunities from the Wessex Basin, Dorset, UK representing ?8 million years of fluctuating regional hypoxia during the Kimmeridgian (? 148–155 Ma). BTA assesses ecosystem functioning using biological traits expressed by species and has not previously been applied to palaeocommunity data. The preserved remains of the palaeocommunities contained gastropods, brachiopods, scaphopods, bryozoans, serpulids, hydroids and crustaceans, but were dominated by bivalves. Significant changes in species composition are shown within periods of less intense hypoxia, but during these periods trait composition did not significantly differ implying conservation of ecological function. However, significant changes in functioning occurred between periods of extremely different palaeoredox state. Proportionally more surface living or shallow burrowing species with traits suggestive of opportunists occurred during periods of low oxygen availability. Morphological differences of hypoxic communities included higher relative abundance of organisms with thinner skeletons (< 0.5 mm) composed of less soluble forms of calcite that may be linked to acidity. These changes are similar to those for modern benthos exposed to hypoxia. Investigation of functional changes that occurred during ancient hypoxic events can be used to infer the magnitude, thresholds, and rates of long‐term functional change in modern communities. Results from this study suggest that during de‐oxygenation delivery of normal benthic functioning will initially be maintained, but will collapse once thresholds are reached. This is consistent with the patterns emerging for contemporary systems where functional collapse is associated with hysteresis and threshold effects.     

Do nematode and macrofauna assemblages provide similar ecological assessment information?

Do nematode and macrofauna assemblages provide similar ecological assessment information? To answer this question, in the summer of 2006, subtidal soft-bottom assemblages were sampled and environmental parameters were measured at seven stations covering the entire salinity gradient of the Mondego estuary. Principal components analysis (PCA) was performed on the environmental parameters, thus establishing different estuarine stretches. The ecological status of each community was determined by applying the Maturity Index and the Index of Trophic Diversity to the nematode data and the Benthic Assessment Tool to the macrofaunal data. Overall, the results indicated that the answer to the initial question is not straightforward. The fact that nematode and macrofauna have provided different responses regarding environmental status may be partially explained by local differentiation in microhabitat conditions, given by distinct sampling locations within each estuarine stretch and by different response-to-stress times of each benthic community. Therefore, our study suggests that both assemblages should be used in marine pollution monitoring programs.     

Response of intertidal macrobenthic communities and primary producers to mitigation measures in a temperate estuary

The main goal of this study was to evaluate the response of intertidal macrobenthic communities associated with Zostera noltii meadows in a temperate estuary (Mondego, Portugal) to the application of mitigation measures aimed at decreasing eutrophication symptoms. In order to assess possible ecological improvements regarding the seagrass habitat and associated macrobenthic communities, data from four different periods, corresponding to the prevailing conditions of distinct systems, were considered. This study (1) gives concrete examples of pathways of benthic intertidal communities’ degradation and recovery; (2) it analyses a long-term dataset (covering almost 25 years) of intertidal communities from a southern European estuary; (3) it is focused on a worldwide problem, and so has potentially far-reaching interest; (4) it exemplifies some of what may be the consequences of the dialogue between science and managers; (5) it assesses the impact and effectiveness of a large-scale mitigation intervention paid for by public funding.The application of preliminary mitigation measures (in 1998) and the full re-establishment of the communication between the two estuarine subsystems (in 2006) allowed for an improvement in the macrobenthic condition and confirmed that hydrologic conditions in the estuary have been the major drivers of the changes observed over the last two decades. However, evaluating the efficiency of the large-scale intervention proved to be a complex task since different communities showed distinct pathways and momentums of recovery.The present study provided valuable insights concerning sustainable long-term management solutions regarding the Mondego Estuary. These particular insights could therefore be useful as a management action guideline applied to other estuarine ecosystems undergoing similar eutrophication problems.     

Long-term response of fishes and other fauna to restoration of former salt hay farms: multiple measures of restoration success

This synthesis brings together published and unpublished data in an evaluation of restoration of former salt hay farms to functioning salt marshes. We compared nine years of field measurements between three restored marshes (Dennis, Commercial, and Maurice River Townships) and a reference marsh (Moores Beach) in the mesohaline portion of Delaware Bay. In the process, we compared channel morphology, geomorphology, vegetation, sediment organic matter, fish assemblages, blue crabs, horseshoe crabs, benthic infauna, and diamondback terrapins. For fishes we compared structural (distribution, abundance) and functional (feeding, growth, survival, reproduction, production) aspects to evaluate the restored marshes in an Essential Fish Habitat context. Marsh vegetation and drainage density responded gradually and positively with restored marshes approximating the state of the reference marsh within the nine-year study period. The fauna responded more quickly and dramatically with most measures equal or greater in the restored marshes within the first one or two years after restoration. Differences in response time between the vegetation and the fauna imply that the faunal response was more dependent on access to the shallow intertidal marsh surface and intertidal and subtidal creeks than on characteristics of the vegetated marsh. The fishes in created subtidal creeks in restored marshes responded immediately and maintained fish assemblages similar to the reference marsh over the study period. The intertidal creek fish assemblages tended to become more like the reference marsh in the last years of the comparison. Overall, these results document the success of the restoration and how marshes function for both resident and transient fauna, especially fishes.     

Land-use effects on structural and functional composition of benthic and leaf-associated macroinvertebrates in four Andean streams

The replacement of native forests by pastures takes place widely in the Andes. The effects of such land-use change on aquatic assemblages are poorly understood. We conducted a comparative analysis of the effects of forest conversion to pastures on the taxonomic, structural, and functional composition of macroinvertebrates (benthic and leaf-associated) in montane and upper montane streams (ecosystem type) of the south Ecuadorian Andes. Taxonomic composition of benthic and leaf-associated macroinvertebrates was different between ecosystem type and land use. Also, major differences in the structural and functional composition of benthic and leaf-associated macroinvertebrates were mainly promoted by land use in both ecosystem types. Forested streams showed higher diversity than pasture streams, sustaining more shredder, scraper, and predatory invertebrates. We also observed differences in the macroinvertebrate communities between benthic and leaf-bag samples. Leaf bags had lower diversity and more collector invertebrates than benthic samples. This study highlights the large effect of riparian forest conversion to pasture land on macroinvertebrate communities, and the importance of using appropriate sampling techniques to characterize aquatic assemblages. We also recommend the maintenance and restoration of riparian vegetation to mitigate the effects of deforestation on stream communities and ecosystem processes.     

Consequences of Increasing Hypoxic Disturbance on Benthic Communities and Ecosystem Functioning

Disturbance-mediated species loss has prompted research considering how ecosystem functions are changed when biota is impaired. However, there is still limited empirical evidence from natural environments evaluating the direct and indirect (i.e. via biota) effects of disturbance on ecosystem functioning. Oxygen deficiency is a widespread threat to coastal and estuarine communities. While the negative impacts of hypoxia on benthic communities are well known, few studies have assessed in situ how benthic communities subjected to different degrees of hypoxic stress alter their contribution to ecosystem functioning. We studied changes in sediment ecosystem function (i.e. oxygen and nutrient fluxes across the sediment water-interface) by artificially inducing hypoxia of different durations (0, 3, 7 and 48 days) in a subtidal sandy habitat. Benthic chamber incubations were used for measuring responses in sediment oxygen and nutrient fluxes. Changes in benthic species richness, structure and traits were quantified, while stress-induced behavioral changes were documented by observing bivalve reburial rates. The initial change in faunal behavior was followed by non-linear degradation in benthic parameters (abundance, biomass, bioturbation potential), gradually impairing the structural and functional composition of the benthic community. In terms of ecosystem function, the increasing duration of hypoxia altered sediment oxygen consumption and enhanced sediment effluxes of NH₄ ⁺ and dissolved Si. Although effluxes of PO₄ ³⁻ were not altered significantly, changes were observed in sediment PO₄ ³⁻ sorption capability. The duration of hypoxia (i.e. number of days of stress) explained a minor part of the changes in ecosystem function. Instead, the benthic community and disturbance-driven changes within the benthos explained a larger proportion of the variability in sediment oxygen- and nutrient fluxes. Our results emphasize that the level of stress to the benthic habitat matters, and that the link between biodiversity and ecosystem function is likely to be affected by a range of factors in complex, natural environments.     

Larval fish assemblage recovery: a reflection of environmental change in a large degraded river

Estuaries are globally important to fisheries but face many anthropogenic stressors that reduce water quality and degrade benthic habitat. The Maumee River estuary has been degraded by industrial contaminants, high sediment and nutrient loads, channelization and elimination of surrounding wetlands, lessening its value as spawning habitat for fishes of Lake Erie. Regulation and better management practices (BMPs) in the watershed have improved the water quality in this estuary, which should result in a response of the biotic community. We compared recent (2010/2011) larval fish assemblage data to similar data from the 1970s (1976/1977) in order to identify changes due to improved water and habitat quality. Family‐level diversity was greater in recent study years compared to the 1970s and family richness increased from 6 to 10. In addition, the abundance of lithophilic spawning fishes was significantly greater in the recent study years. Increased diversity and family richness were consistent with increased water quality in the Maumee River whereas the observed increase in abundance of lithophilic spawners was consistent with an increase in the amount or quality of benthic habitat used by species in these families for spawning. Better wastewater management and agricultural practices in coastal watersheds can benefit the early life stages of fishes, thus benefitting coastal fisheries. Furthermore, larval fish assemblages may be useful indicators of biological integrity because of their sensitivities to environmental change. Routine sampling of estuarine larval fish assemblages could provide practitioners with insight into ecosystem changes and measure the response of the biotic community to restoration.     

The food web in the lower part of the Seine estuary: a synthesis of existing knowledge

The Seine estuary illustrates the alterations to estuaries due to human activities heavy releases of pollutants of various origins and significant morphological changes beginning in the middle of the 19th century. The intertidal mudflat surface has been seriously reduced (< 30km²) since the channels of the Seine River came under management. While the role of the Seine estuary in the dynamics of the eastern English Channel ecosystem is recognized as important, the biological characteristics of the estuary remained relatively unknown until the 1990s. Biological diversity was progressively impoverished from the polyhaline zone to the oligohaline zone. In spite of a heavily contaminated environment, the macrobenthic and planktonic fauna of the Seine estuary remains similar to those of other northeastern Atlantic estuaries. The fauna exhibit clear contrasts between areas with very high abundance and others with very low abundance. The pelagic fauna, especially the copepod Eurytemora affinisand the shrimp Palaemon longirostris, are more abundant in the Seine estuary than in other estuaries. Diversified and abundant, Abra alba-Pectinaria koreni and Macoma balthica benthic communities occur, respectively, in the outer and inner parts of the estuary. In subtidal flats, benthic fauna is especially poor in terms of specific richness, abundance and biomass. Paradoxically, considering the high abundance of prey, fish are particularly scarce. Two food webs have been identified. In the oligohaline zone, where turbidity is maximum, the food web is exclusively planktonic, due to dredging that prevented benthic fauna from settling. In the polyhaline zone, fish populations that feed particularly on benthic fauna benefit from low turbidity and high oxygen concentrations. So, in spite of heavy organic and metallic contamination and human activities, the Seine estuary remains a highly productive ecosystem, which provides a nursery for marine fish and feeding grounds for migratory birds. A global management plan appears to be necessary in order to guarantee that the Seine estuary continues to function as it currently does.     

Benthic meiofauna as indicator of ecological changes in estuarine ecosystems: The use of nematodes in ecological quality assessment

Estuarine meiofauna communities have been only recently considered to be good indicators of ecological quality, exhibiting several advantages over macrofauna, such as their small size, high abundance, rapid generation times and absence of a planktonic phase. In estuaries we must account not only for a great natural variability along the estuarine gradient (e.g. sediment type and dynamics, oxygen availability, temperature and flow speed) but also for the existence of anthropogenic pressures (e.g. high local population density, presence of harbors and dredging activities).Spatial and temporal biodiversity patterns of meiofauna and free-living marine nematodes were studied in the Mondego estuary (Portugal). Both taxonomic and functional approaches were applied to nematode communities in order to describe the community structure and to relate it with the environmental parameters along the estuary. At all sampling events, nematode assemblages reflected the estuarine gradient, and salinity and grain size composition were confirmed to be the main abiotic factors controlling the distribution of the assemblages.Moreover, the low temporal variability may indicate that natural variability is superimposed by the anthropogenic pressures present in some areas of the estuary. The characterization of both meiofauna and nematode assemblages highlighted the usefulness of the integration of both taxonomic and functional attributes, which must be taken into consideration when assessing the ecological status of estuaries.     

Trophic and functional cascades in tropical versus temperate aquatic microcosms

Inverse trophic cascades are a well explored and common consequence of the local depletion or extinction of top predators in natural ecosystems. Despite a large body of research, the cascading effects of predator removal on ecosystem functions are not as well understood. Developing microcosm experiments, we explored food web changes in trophic structure and ecosystem functioning following biomass removal of top predators in representative temperate and tropical rock pool communities that contained similar assemblages of zooplankton and benthic invertebrates. We observed changes in species abundances following predator removal in both temperate and tropical communities, in line with expected inverse effects of a trophic cascade, where predation release benefits the predator’s preys and competitors and impacts the preys of the latter. We also observed several changes at the community and ecosystem levels including a decrease in total abundance and mean trophic level of the community, and changes in chlorophyll-a and total dissolved particles. Our results also showed an increase in variability of both community and ecosystem processes following the removal of predators. These results illustrate how predator removal can lead to inverse trophic cascades both in structural and functioning properties, and can increase variability of ecosystem processes. Although observed patterns were consistent between tropical and temperate communities following an inverse cascade pattern, changes were more pronounced in the temperate community. Therefore, aquatic food webs may have inherent traits that condition ecosystem responses to changes in top-down trophic control and render some aquatic ecosystems especially sensitive to the removals of top predators.     

Linking biodiversity indicators,ecosystem functioning,provision of services and human well-being in estuarine systems: Application of a conceptual framework

Assuming that human well-being strongly relies on the services provided by well-functioning ecosystems, changes in the ecological functioning of any system can have direct and indirect effects on human welfare. Intensive land use and tourism have expanded in recent decades along coastal ecosystems, together with increasing demands for water, food and energy; all of these factors intensify the exploitation of natural resources. Many of the interrelations between ecosystem functioning and the provision of ecosystem services (ES) still require quantification in estuarine systems. A conceptual framework to assess such links in a spatially and temporally explicit manner is proposed and applied to the Mondego estuary (Portugal). This framework relies on three consecutive steps and discriminates among biodiversity structural components, ecosystem functioning and stability and the services provided by the ecosystem.Disturbances in abiotic factors were found to have a direct effect on biodiversity, ecosystem functioning and the provision of ES. The observed changes in the species composition of communities had a positive effect on the ecosystem's productivity and stability. Moreover, the observed changes in the estuarine ES provision are likely to arise from changing structural and abiotic factors and in the present case from the loss or decline of locally abundant species. This study also indicates that linear relationships between biodiversity, ecosystem functioning and services provision are unlikely to occur in estuarine systems. Instead, cumulative and complex relations are observed between factors on both temporal and spatial scales. In this context, the results suggest several additional conclusions: (1) biodiversity and ecosystem functioning interaction with human well-being need to be incorporated into decision-making processes aimed at the conservative management of systems; (2) the institutional use of research results must be part of the design and implementation of sustainable management activities; and (3) more integrative tools/studies are required to account for the interactions of estuarine ecosystems with surrounding socio-economic activities. Therefore, when performing integrated assessments of ecosystem dynamics, it becomes essential to consider not only the effects of biodiversity and ecosystem functioning on services provision but also the effects that human well-being and ES provision may have on estuarine biodiversity and ecosystem functioning.The proposed framework implies taking into account both the functional and the commodities points of view upon natural ecosystems and by this representing a line of thought which will deserve further research to explore more in detail the conceptual links between biodiversity–ecosystem functioning–services provided.     

Functional diversity of macrobenthic assemblages decreases in response to sewage discharges

We analyzed the effects of sewage discharge on a subtropical estuary by comparing the functional diversity of intertidal macroinvertebrate assemblages in contaminated with non-contaminated reference areas. Functional structure was assessed using biological traits analysis (BTA) and four multivariate indices (FRic, FEve, FDis and Rao's Q) of functional diversity. Our results showed clear and temporally consistent changes in macrobenthic functional structure in contaminated areas. However, these results depended on whether abundance- or biomass-based measurements were used, with abundance-based analyses distinguishing most clearly between sewage contamination conditions. Differences between contaminated and non-contaminated conditions were also displayed by BTA for all the functional trait categories. FDis (functional divergence) and Rao's Q (functional dispersion) were higher in the non-contaminated condition and increased with higher benthic environmental health, as measured by the AMBI index. These patterns of higher functional divergence and dispersion were driven by the numerical dominance of opportunistic annelids in the contaminated condition. We suggest that abundance-based BTA, and the FDis and/or Rao's Q indices are reliable approaches to detect changes in functional structure with respect to sewage pollution. They have a great potential for environmental assessment and monitoring of subtropical estuarine ecosystems.