Effects of multi-year droughts on fish assemblages of seasonally drying Mediterranean streams

1. This study analysed changes occurring in Mediterranean stream fish assemblages over a sequence of dry years followed by a generally wet period (1991–98). Variations in assemblage attributes were quantified at the basin and stream reach scales, and related to variables reflecting the occurrence of unusually dry or wet conditions. 2. Assemblage variability increased along with the resolution of analysis, with little changes in species richness, composition and rank abundances, but significant variation in individual species abundances. Fluctuations in relative abundances were significantly affected by variables reflecting the severity of summer droughts and the occurrence of rainy springs. These patterns were evident at the basin scale, while variability at individual stream reaches tended to be higher and less related to rainfall patterns. 3. At least three response guilds to rainfall variation could be identified: two of the four abundant and widespread species (chub and loach) declined following dry years, whereas the two other core species (nase and eel) declined after rainy spring; one scarce native species (stickleback) increased in dry years. 4. Except at the two most upstream reaches, the assemblages tended to recover quickly to previous configuration after the changes occurring during the sequence of dry years. 5. Temporal variability of local assemblages was concordant among reaches but did not follow any consistent spatial pattern. Instead, spatial patterns in assemblage attributes changed over time in response to environmental variability, with a tendency for a disruption of upstream–downstream gradients following dry years. 6. Results supported the view that present‐day droughts cause relatively small and transient changes to Mediterranean stream fish assemblages. However, longer and more severe droughts expected under altered future climates, may result in declines or local extinctions of the most sensitive species and their potential replacement by more resistant species. Changing drought regimes thus need to be duly considered in the development of conservation strategies for Mediterranean stream fish.     

Assessing effects of water abstraction on fish assemblages in Mediterranean streams

1. Water abstraction strongly affects streams in arid and semiarid ecosystems, particularly where there is a Mediterranean climate. Excessive abstraction reduces the availability of water for human uses downstream and impairs the capacity of streams to support native biota. 2. We investigated the flow regime and related variables in six river basins of the Iberian Peninsula and show that they have been strongly altered, with declining flows (autoregressive models) and groundwater levels during the 20th century. These streams had lower flows and more frequent droughts than predicted by the official hydrological model used in this region. Three of these rivers were sometimes dry, whereas there were predicted by the model to be permanently flowing. Meanwhile, there has been no decrease in annual precipitation. 3. We also investigated the fish assemblage of a stream in one of these river basins (Tordera) for 6 years and show that sites more affected by water abstraction display significant differences in four fish metrics (catch per unit effort, number of benthic species, number of intolerant species and proportional abundance of intolerant individuals) commonly used to assess the biotic condition of streams. 4. We discuss the utility of these metrics in assessing impacts of water abstraction and point out the need for detailed characterisation of the natural flow regime (and hence drought events) prior to the application of biotic indices in streams severely affected by water abstraction. In particular, in cases of artificially dry streams, it is more appropriate for regulatory agencies to assign index scores that reflect biotic degradation than to assign ‘missing’ scores, as is presently customary in assessments of Iberian streams.     

Temporal variability in fish assemblages from disturbed and undisturbed streams

Fish assemblages were sampled by electrofishingover a two- to ten-year period in undisturbedand anthropogenically disturbed South Carolinacoastal plain streams. Jaccard similarity,Bray–Curtis similarity, and Spearman rankcorrelations among samples collected from thesame sites over time were significantly greaterat undisturbed sites than at disturbed sites,suggesting greater fish assemblage persistenceand stability at the undisturbed sites. TheIndex of Biotic Integrity (IBI) also exhibitedsignificantly less variation over time atundisturbed sites than at disturbed sites.Physical habitat structure changed more overtime at disturbed sites than at undisturbedsites, and this variability was directlyrelated to temporal variability in fishassemblage structure. Comparisons betweenmultiple and single pass electrofishing samplessuggested that only a small proportion of thetemporal variability observed at the studysites was caused by inefficient sampling.Assessment of temporal variation in fishassemblage structure can serve as an indicatorof environmental disturbance and facilitate thedistinction of substantive ecological changefrom normal background variation.     

Life-history traits of invasive fish in small Mediterranean streams

We compared the life-history traits of native and invasive fish species from Catalan streams in order to identify the characters of successful invasive fish species. Most of the exotic fish species were characterized by large size, long longevity, late maturity, high fecundity, few spawnings per year, and short reproductive span, whereas Iberian native species exhibited predominantly the opposite suite of traits. Species native to the southeastern Pyrenees watershed were also significantly different from species native to the rest of the Iberian Peninsula but not native to this watershed. Iberian exotic species come predominantly from large river basins, whereas Catalan streams (and other small, coastal river basins) correspond to basins and streams of a smaller size and different hydrology, with differences in species composition and life-history traits of fish. The occurrence and spread of invasive species was not significantly related to life-history traits but to introduction date. The successful prediction of future invasive species is limited due to small differences in life-history and ecological traits between native and exotic species. Fecundity, age at maturity, water quality flexibility, tolerance to pollution and habitat seem the most discriminating life-history variables. This revised version was published online in July 2006 with corrections to the Cover Date.     

Effect of flooding on fish assemblages in small streams in South Korea

The impact of Typhoon-Rusa-generated flood on fish assemblages was investigated in small streams in the northeastern part of South Korea. As a result of high precipitation (870 mm day⁻¹) during the typhoon, stream morphology and substrate composition changed. Stream depth and width decreased and slightly enlarged, respectively. Substantial amounts of mud and silt flowed into the streams and modified substrate composition to a simple state. Although the total number of individual fish significantly decreased after the flood, the dominant species remained the same relative to before the typhoon, and their relative abundance subsequently increased. However, the rank order of fish assemblages before and after the flood changed. Three years after the flood, fish assemblage recovered, but the number of individuals per site was still lower than prior to the flood. Flooding affects fish assemblages both directly and indirectly. Indirect impacts, such as habitat alteration, more critically affected the change in local fish assemblage and delayed recovery time. Nonetheless, fish assemblages persisted at sites where floods occurred.     

Within and between day variability in coral reef fish assemblages: Implications for fish community surveys

Coral reef ecosystems are under increasing anthropogenic pressures making it ever more important to monitor changes in fish communities to implement appropriate management. In contrast to long-term spatial and temporal variation which has been extensively documented, little work has been carried out to identify variability in fish assemblages on short time scales, with few studies testing patterns of fish assemblages between and within days. Here we investigated the diurnal changes in species richness, relative abundance and assemblage composition in a shallow coral reef fish community in Egypt. To do so, a section of coral reef was filmed during the morning (0600 h), midday (1000 and 1400 h) and afternoon (1800 h) over eleven days. Dusk (0600 h) and dawn samples (1800 h) showed higher species richness compared to late morning (1000 h) and mid-day samples (1400 h) and borderline significantly higher numbers of total individuals, likely associated with feeding activity and predator avoidance. Assemblage composition varied across days and time-of-day, showing greater variability during dusk and dawn associated with a transition between day-time and night-time assemblages. Our results have implications for designing coral reef fish surveys, emphasising that short-term changes in fish communities should be considered when designing experiments to monitor fish assemblages over time. Where possible, we suggest increasing replication within sites and time scales or randomising data within a specific time window at all sites, looking to exclude dusk and dawn.     

Effects of coalbed natural gas development on fish assemblages in tributary streams of the Powder and Tongue rivers

1. Extraction of coalbed natural gas (CBNG) often results in disposal of large quantities of CBNG product water, which may affect aquatic ecosystems. We evaluated the effects of CBNG development on fish assemblages in tributary streams of the Powder and Tongue rivers. We used treatment and control, impact versus reference sites comparisons, surveys of CBNG product‐water streams and in situ fish survival approaches to determine if CBNG development affected fish assemblages. 2. Several of our results suggested that CBNG development did not affect fish assemblages. Species richness and index of biotic integrity (IBI) scores were similar in streams with and streams without CBNG development, and overall biotic integrity was not related to the number or density of CBNG wells. Fish occurred in one stream that was composed largely or entirely of CBNG product water. Sentinel fish survived in cages at treatment sites where no or few fish were captured, suggesting that factors such as lack of stream connectivity rather than water quality limited fish abundance at these sites. Fish species richness did not differ significantly from 1994 to 2006 in comparisons of CBNG‐developed and undeveloped streams. Biotic integrity declined from 1994 to 2006; however, declines occurred at both impact and reference sites, possibly because of long‐term drought. 3. Some evidence suggested that CBNG development negatively affected fish assemblages, or may do so over time. Specific conductivity was on average higher in treatment streams and was negatively related to biotic integrity. Four IBI species richness metrics were negatively correlated with the number or density of CBNG wells in the catchment above sampling sites. Bicarbonate, one of the primary ions in product water, was significantly higher in developed streams and may have limited abundance of longnose dace (Rhinichthys cataractae). Total dissolved solids, alkalinity, magnesium and sulphate were significantly higher in developed streams. 4. Biological monitoring conducted before the development of CBNG, and continuing through the life of development and reclamation, together with data on the quantity, quality and fate of CBNG product water will allow robust assessment of potential effects of future CBNG development worldwide.     

Seasonal variation in the composition of fish assemblages in small Amazonian forest streams: evidence for predictable changes

1. The effects of seasonal inundation on the biology of fishes on floodplains of large Amazonian rivers are well studied. However, the small seasonal changes in headwater streams are generally considered to have little effect on fish assemblages. 2. In this study, we analysed seasonal changes in the species composition and abundance of fish in small Amazonian forest streams. We sampled fish with hand and seine nets in headwater streams in a 10 000 ha terra‐firme forest reserve near Manaus, Brazil. Each stream was surveyed at the end of the 2005 dry season, at the beginning of the 2006 rainy season and at the beginning of the 2006 dry season, by means of a standardized sampling effort. 3. The numbers of individuals and species caught were higher in the dry season, but rarefaction analyses indicated that greater species numbers could have been due simply to the larger number of individuals caught. 4. Between the dry and rainy season, the direction of changes in species composition in multivariate space varied among sites, especially for quantitative (abundance) data. However, the observed variation among sites was the less than expected if the directions of change were random. 5. Fish assemblages in the second dry season were more similar to those in the previous dry season than expected if changes in species composition among seasons were random. This indicates that a general seasonal pattern in fish assemblages can be detected, despite the existence of some erratic site‐specific changes. 6. Most of the species that showed large seasonal variations in density occupy temporary ponds during the rainy season, when much of the valley is inundated and pond networks form adjacent to streams. Short‐duration lateral migrations to these ponds may play an important role in the seasonal fish‐assemblage dynamics in Amazonian headwater streams. 7. Our results contrast with previous studies on small Amazonian streams, which have found little seasonal change in fish assemblages, and highlight the importance of the abundance of common species as an indicator of general fish assemblage structure in biological monitoring programmes.     

Effects of oil palm plantations on habitat structure and fish assemblages in Amazon streams

The aim of this research is to assess the effects of oil palm plantations on stream habitat and their fish assemblage diversity. We hypothesize that streams which drain through oil palm plantations tend to be less heterogeneous, limiting the occurrence of many species, than streams that drain through forest fragments, which support higher fish diversity. A total of 17 streams were sampled; eight in forest fragments and nine in oil palm plantations. Environmental and biological variables were sampled along 150 m stretch in each stream. Of the 242 environmental variables measured, ten were considered important to assess the condition of structural habitat, and out of these variables, four were considered relevant in the distinction between streams in oil palm plantations and forest fragments. A total of 7245 fishes were collected, belonging to 63 species. Unlike our original hypothesis, the species richness did not differ between forest fragment and oil palm plantations streams, showing that it is not a good divert measure in streams disturbance assessment. However, fish assemblages differed in species composition, and 56 species were recorded in oil palm plantation streams, while 44 species were recorded in forest fragments streams. Some species were identified as indicators of either altered (Aequidens tetramerus and Apistogramma agassizii) or undisturbed areas (Helogenes marmoratus). Overall, oil palm plantations were proven to change stream habitat structure and fish species distribution, corroborating other studies that have evidenced changes in patterns of biological community structure due to impacts by different land uses.     

Influence of riparian forests on fish assemblages in temperate lowland streams

Environmental Biology of Fishes - The characteristics of riparian vegetation along streams vary with natural and anthropogenic factors. Deforestation for agricultural purposes has consequences for...     

Identification of key microhabitats for fish assemblages in tropical Brazilian savanna streams

The habitat use by stream fish can provide an understanding of this important component of species niches, and the changes in the availability of certain structures of instream habitats have a strong influence on the occurrence and abundance of fish species. In this study, we identified the interaction networks between fish and microhabitats in 19 streams of three watersheds from the Brazilian savanna, known as the “Cerrado”. We also investigated whether the connectance between fish species and microhabitats depends on either the species abundance or availability of microhabitats and verified whether the use of stream microhabitats vary among watersheds. The data for the fish were obtained using standardized fish collections and underwater (snorkeling) observations to record the association of fish species with 11 stream microhabitats. We used the incidence data to calculate the connectance of species with different microhabitats, a Spearman correlation analysis to test the dependence of the connectance to the species abundance and microhabitat availability, and an Analysis of Similarity to test whether the use of stream microhabitats by fish can vary among watersheds. In all of the watersheds, the tetras of the family Characidae used the largest number of microhabitats. The most‐used microhabitats by the fish watersheds were the lateral surface, column surface, and unconsolidated substrate, which were differentially used by the fish in each watershed, indicating the variable importance of microhabitats. Despite this observation, the fish occurred more frequently in the lateral microhabitats. When the data for all of the streams were combined, the species connectance was correlated with the species abundance. We also discuss the consequences of the elimination of certain bottom structures in the context of siltation, which is the main issue in the studied region. The results of our study allowed the detection of key microhabitat structures and can be used for the aquatic ecosystems restoration. (© 2012 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Critical influence of seasonal sampling on the ecological quality assessment of small headwater streams

Variability in the ecological quality assessment of reference sites was tested on small headwater streams in Ireland. Although headwater streams constitute a large portion of the river channel network, they are not routinely monitored for water quality. Various metrics were used including the Irish Q-value and the newly developed Small Streams Risk Score (SSRS), and metrics applied elsewhere in the Atlantic biogeographic region in Europe, including the Biological Monitoring Working Party score (BMWP), the Average Score per Taxon (ASPT), the Ephemeroptera, Plecoptera and Trichoptera taxa (EPT), the Belgium Biotic Index (BBI) and the Danish Stream Fauna Index (DSFI). The AQEM (version 2.5a) assessment software was used to apply some of these metrics. The spring and summer datasets are used to test the performance of biotic metrics with respect to season, and the applicability of their use to assess the ecological quality of wadeable streams. The quality status of most sites assigned by the various metrics was high using the spring invertebrate data, and an apparent considerable deviation in quality status occurred when the summer data was applied. Seasonal differences were noted using all the biotic indices and are attributed to the absence of pollution-sensitive groups in summer. Seasonal variability in the water quality status was particularly evident in acidic streams draining non-calcareous geologies with peaty soils that had relatively lower numbers of taxa. Some indices applied reflect a greater seasonal difference in the quality category assigned. The least amount of variability between seasons was obtained using the ASPT and the SSRS risk assessment system. Results suggest that reference status is reliably reflected in spring when more pollution-sensitive taxa were present, and that a new ecological quality assessment tool is required for application in summer when impacts may be most severe. This highly heterogeneous freshwater habitat seems to have too few taxa present in the summer to reliably determine the ecological quality of the stream using the available indices. Handling editor: R. Bailey     

Implications of species loss in freshwater fish assemblages

Freshwater systems are vulnerable to pollution and species loss often ensues. Are there additional implications for assemblage structure? Here we use Berger‐Parker d. Simpson's I/D and Simpson's F to measure the ecological diversity of pristine and perturbed freshwater fish assemblages in Trinidad. West Indies, and Oklahoma. USA. Although the impacted sites typically had fewer species than expected, they could not be distinguished from unperturbed ones of equivalent richness. Changes in the evenness of these assemblages are thus driven by changes in richness. One practical outcome is that diversity indices may not provide independent verification of the detrimental consequences of pollution. The similarity in structure of naturally and anthropogenically impoverished assemblages provides no grounds for complacency, however, since it ignores the evolutionary history of the species concerned. On the basis of our results we suggest that species provenance may be important in tests of ecological function. Moreover, these investigations should replicate natural patterns of evenness as well as richness.     

Effects of ecological restoration on beetle assemblages: results from a large-scale experiment in a Mediterranean steppe rangeland

Given that biological conservation cannot prevent the full range of negative impacts on biodiversity, ecological restoration is nowadays commonly acknowledged as a necessary tool for conservation purposes. Here, we report on an ecological rehabilitation project in the La Crau area (south-eastern France), beginning in 2009 when a former industrial orchard (357 ha) was rehabilitated into a Mediterranean rangeland. We assessed the effect of ecological rehabilitation and different additional restoration treatments on beetle assemblages. Seven treatments were considered: the reference steppe, the rehabilitated treatment alone, three additional experimental restoration treatments (soil transfer; nurse species seeding and hay transfer), the control and the edge between the steppe and the former industrial orchard area. All beetle families were considered. Beetles were sampled with pitfall traps for 3 years (2011–2013). Our major finding was a positive effect of soil transfer and nurse species seeding treatments, which promote the characteristic beetle composition of the reference steppe. Nevertheless, strong differences remain between the steppe and the various assessed treatments in terms of composition. Long-term monitoring should therefore now focus on particular beetle indicator species that could reflect the response of the overall characteristic beetle assemblage of the reference steppe.     

Macroinvertebrate assemblages at mesohabitat scale in small sized volcanic siliceous streams of Central Italy (Mediterranean Ecoregion)

According to the guidelines of the European Water Framework Directive, assessment of the ecological quality of streams and rivers should be based on type-specific reference conditions. Moreover to support biological indicators an hydromorphological analysis is also requested for each river type. The rationale for including an habitat assessment in biomonitoring study is that a biological community can be influenced by habitat quality just as water chemistry.In the present work benthic macroinvertebrates were analysed in a specific river type of Central Italy (small-sized streams, volcanic-siliceous), to identify taxa assemblages at the mesohabitat scale and to test how common measures of benthic community used in biomonitoring differ between riffles and pools in order to evaluate if differences may influence water quality classification.Macroinvertebrates were collected in 10 selected streams, covering the whole quality range present in the geographic area from ‘reference sites’ to human-impacted sites, along a pool–riffle sequence following a multihabitat sampling protocol.We compared assemblage of macroinvertebrates found in different mesohabitats using principal component analysis (PCA). Similar site grouping was obtained in riffle, pool and abiotic analysis.The measures of diversity and abundance were used as replicates in ANOVA analysis to test differences between pools and riffles within the groups of sites. There were no significant differences in terms of taxa richness and total abundance.When we compared the abundance of each taxon we found significant differences only in the group of reference sites with 18 taxa (about 25%) that showed a significant habitat preference.Our findings support that macroinvertebrates assemblages reflected primarily the environmental conditions and differences at mesohabitat scale are strongly correlated to hydromorphological condition and are maximized in reference sites. However such differences do not influence the ecological status assessment in this typology.     

An index of biotic integrity based on fish assemblages for subtropical streams in southern Brazil

Several methods for calculating indices of biological integrity (IBIs) have been developed for different ecogeographic regions of the world. All of them calculate IBI scores by comparing against reference sites or historical data on fish assemblage composition. Because of intensive agriculture and urbanization in our study area, we located no reference sites, and historical information about fish assemblage composition did not exist. Instead, we developed hypothetical reference scores based on seasonal electrofishing surveys at six study sites in adjacent but geomorphologically different watersheds. Our IBI included 10 metrics that varied with degree of degradation. We found that Shannon–Wiener indices varied significantly between seasons, indicating significant changes in species composition. Therefore, we calculated seasonal IBI scores also, but these did not significantly differ from each streams general IBI score, which was calculated on the basis of four samples per site. General stream IBI scores reflected differing levels of anthropogenic disturbance.     

Patterns in the species composition of fish assemblages among Wisconsin streams

Synopsis To better understand patterns of fish assemblage composition in Wisconsin streams in relation to major environmental gradients, I carried out multivariate direct gradient analysis (canonical correspondence analysis) of two large independent datasets on fish species abundance in Wisconsin streams. Analysis of the two datasets yielded similar results, suggesting that observed patterns and relationships were real. Stream sites were distributed along fish species-environment gradients, but segregation into distinct stream temperature and geographic groups was also evident. The strongest gradient in both datasets was related to summer water temperature patterns, and encompassed a transition from small, coldwater streams dominated by salmonids, cottids, certain cyprinids, and few other species, to both small and large, warmwater streams dominated by a high diversity of different cyprinids, catostomids, ictalurids, centrarchids, and percids. A second gradient in both datasets was complex but largely geographic. Within it, sites from each of the four ecoregions that occupy Wisconsin formed fairly discrete groups. The strongest differences were between sites in the two southern Wisconsin ecoregions, the Driftless Area and the Southeastern Wisconsin Till Plains, that were dominated by certain cyprinids, ictalurids, and centrarchids, and sites in the two northern Wisconsin ecoregions, the North Central Hardwood Forests and the Northern Lakes and Forests, that were dominated by a different set of cyprinids and ictalurids, plus some petromyzontids, salmonids, catostomids, and percids. Sites from the Driftless Area that were mostly higher-gradient (steep stream slope) and had many riffle-dwelling species could also be distinguished from sites in the Southeastern Wisconsin Till Plains that were mostly lower-gradient and had many pool-dwelling species. The patterns of fish assemblage composition among sites and the associated fish species-environment relationships that were revealed by the analyses provided a framework for developing an ecologically meaningful hierarchical classification of Wisconsin stream sites based on stream thermal regime, ecoregion, stream size, and stream gradient.     

Temporal organization of fish assemblages in floodplain lagoons: the role of hydrological connectivity

The present study evaluated the hypothesis that after flooding events, non-random patterns of species co-occurrence (segregation) are progressively intensified in fish assemblages inhabiting seasonally isolated lagoons. We sampled lagoons in the upper Paraná River floodplain between 1992 and 1993, and classified them into five hydrological phases, according to their surface connectivity. During the period of isolation (9 months), lagoons depth decreased progressively, but desiccation was reversed after 4 months (possibly due to groundwater infiltration and rainfall). A significant co-occurrence pattern (segregation) occurred in the last phase, supporting our initial hypothesis. However, richness, abundance and composition were significantly correlated with habitat depth, indicating that assemblage structure and organization is closely associated with dynamics of habitat retraction/expansion during isolation. Although environmental conditions of lagoons (absence of prolonged desiccation) prevented an adequate test of our hypothesis, our data suggests that, in addition to the importance of surface floods, the hydrological cycle as a whole has a crucial role shaping the organization of fish assemblages in floodplain lagoons seasonally isolated.