Coralligenous reefs state along anthropized coasts: Application and validation of the COARSE index,based on a rapid visual assessment (RVA) approach

A rapid visual assessment (RVA) approach for the characterization and assessment of the integrity of coralligenous reefs was applied in 21 stations subjected to different levels of anthropogenic pressure, along the French Mediterranean coasts. The reefs were characterized from both the geomorphologic and bionomic (biotic cover, conspicuous species richness, canopy-forming species, etc.) points of view, and their health status was estimated through the COARSE (COralligenous Assessment by ReefScape Estimate) index. The sensitivity of the COARSE index and the robustness of the RVA approach to observer biases were analyzed. Results showed that most coralligenous reefs were characterized by (sub) vertical cliffs or platforms with variable slope, usually dominated by biotic facies with Paramuricea clavata and/or Eunicella cavolini in healthy stations, or by algal associations or facies of impoverishment in the most impacted situations. The overall quality scores of the COARSE index generally reflected the putative level of stress of the sampling stations; differences due to observer biases resulted negligible. Coupling the RVA approach with the COARSE index proved an effective protocol for both the characterization and the evaluation of coralligenous reefs: the former is achieved by the analysis of the whole complexity of this habitat, the latter provides for the first time an indication of sea-floor integrity, differently from previous indices that aim at estimating water quality.     

An assessment of macrophyte community metrics in the determination of the ecological condition and total phosphorus concentration of Mediterranean ponds

The macrophyte vegetation of 51 ponds situated in the Duero river basin on the Northern Iberian Plateau was studied with the aim of selecting metrics that responded clearly to perturbation and that should be included in a multimetric index for assessing the ecological condition (expression of the quality of the structure and functioning of aquatic ecosystems associated with surface waters) of Mediterranean ponds. Furthermore, the specific response of metrics to the total phosphorus (TP) concentration was also investigated because of agricultural activities, which usually increase the concentration of nutrients in aquatic systems, are one of the principal types of impairment affecting ponds in the Duero basin.A total of 19 metrics representing several aspects of the structure of macrophyte communities (cover, richness, diversity) were selected as potential metrics.The strong overlap which was observed for macrophyte metrics between classes of ecological conditions (bad, poor, moderate, good, best available) and TP concentrations (>600, 600-300, 300-100, 100-50, <50 μg L⁻¹ TP) constitutes a major problem in defining and separating these classes. For this reason, Mann-Whitney U-test and discrimination efficiency were carried out to determine which of the measures best discriminated between slightly impaired sites (ponds in good or best available condition) and perturbed ponds (ponds in moderate, poor or bad condition). Most of the metrics showed significant differences (p < 0.05) between slightly impaired and perturbed ponds. However, only total cover and hydrophyte richness, which had the highest discrimination efficiency (>78%), showed no inter-quartile overlap (25th-75th percentile) between the two ecological classes. For these reasons, both total cover and hydrophyte richness were selected for the implementation of a multimetric index able to discriminate between slightly impaired and degraded Mediterranean flatland ponds.Currently, eutrophication is considered the main pressure on lakes. However, macrophyte metrics were far less sensitive to TP concentration than to ecological condition changes. This shows that other pressures are also of considerable importance. Thus, the definition of the ecological condition of lakes using macrophytes should not be based only on responses to eutrophication pressure, as has been done in some European countries.     

Mapping biodiversity in three-dimensions challenges marine conservation strategies: The example of coralligenous assemblages in North-Western Mediterranean Sea

Multi-facet diversity indices have been increasingly widely used in conservation ecology but congruence analyses both on horizontal and vertical axes have not yet been explored. We investigated the vertical and horizontal distributions of α and β taxonomic (TD), functional (FD) and phylogenetic diversity (PD) in a three-dimensional structured ecosystem. We focused on the Mediterranean coralligenous assemblages which form complex structures both vertically and horizontally, and are considered as the most diverse and threatened communities of the Mediterranean Sea. Although comparable to tropical reef assemblages in terms of richness, biomass and production, coralligenous assemblages are less known and more rarely studied, in particular because of their location in deep waters. Our study covers the entire range of distribution of coralligenous habitats along the French Mediterranean coasts, representing the most complete database so far developed for this important ecosystem. To our knowledge, this is the first analysis of spatial diversity patterns of marine biodiversity on both horizontal and vertical scales.Our study revealed that taxonomic diversity differed from functional and phylogenetic diversity patterns at the station level, the latter two being strongly structured by depth, with shallower stations generally richer than deeper ones. Considering all stations, phylogenetic diversity was less congruent to taxonomic diversity (Pearson's correlation of r = 0.48) but more congruent to functional diversity (r = 0.69) than randomly expected. Similar congruence patterns were revealed for stations deeper than 50 m (r = 0.44 and r = 0.84, respectively) but no significantly different congruence level than randomly expected was revealed among diversity facets for more shallow stations. Mean functional α- and β-diversity were lower than phylogenetic diversity and even lower than taxonomic α- and β-diversity for both vertical and horizontal scales. Low FD and PD values at both α- and β-diversity indicated functional and phylogenetic clustering. Community dissimilarities (β-diversity) increased over depth especially in central and eastern part of the French Mediterranean littoral and in northern Corsica, indicating coralligenous vertical structure within these regions. Overall horizontal β-diversity was higher within the 50–70 m depth belts.We conclude that taxonomic diversity alone is inadequate as a basis for setting conservation goals for this ecosystem and additional information, at least on phylogenetic diversity, is needed to preserve the ecosystem functioning and coralligenous evolutionary history. Our results highlight the necessity of considering different depth belts as a basis for regional scale conservation efforts. Current conservation approaches, such as the existing marine protected areas, are insufficient in preserving coralligenous habitats. The use of multi-facet indices should be considered, focusing on preserving local diversity patterns and compositional dissimilarities, both vertically and horizontally.     

Effects of Mediterranean climate annual variability on stream biological quality assessment using macroinvertebrate communities

Data on macroinvertebrates of selected reference sites were compiled from a long-term monitoring programme carried out in the Mediterranean Catalan Basins (NE Spain) that permitted analysis for nine years, from 1996 to 2004, using a homogeneous data collection procedure. This study aims to analyse the differences in composition and structure of macroinvertebrate communities at family level in five Mediterranean river types, and the values of biological quality metrics (IBMWP and IASPT indices, taxon richness and EPT) in reference conditions. Also differences between seasons (spring vs. summer) and between dry and wet periods were analysed. The dry and wet periods were determined using the Standardised Precipitation Index (SPI). A total of 29 reference sites were selected out of 184 sampling sites analysed, and 171 reference samples were available (from 1996 to 2004), of which 88 were sampled in dry periods, whereas 83 correspond to wet periods. Differences on community composition at family level were appreciated, clustering the rivers in three different groups: (1) rivers with a continuous flow regime located in siliceous zones; (2) rivers with a continuous flow regime located in calcareous zones; and (3) temporary rivers regardless of geology. Moreover, our results explain that the characteristics of hydrological periods (dry and wet) characterize the differences between communities better than just the season. The analysis of four biological quality metrics reveals clear differences between values obtained from dry and wet periods concerning taxon richness, EPT values and IBMWP biological indices, whereas the IASPT index does not show significant differences. The median taxonomic richness in wet periods is 32 macroinvertebrate families per sample while in dry periods this value falls to 22. Reference values of IBMWP index, the total number of taxa, and EPT metric are different between dry and wet periods in spring samples, while these differences are not relevant for IASPT index except for temporary streams. Hydrological specific conditions should additionally be considered in order to better calculate biological reference conditions, and to properly apply biological quality metrics used to establish the ecological status in Mediterranean rivers, especially in temporary ones. The use of the dry–wet period classification according to the climate characteristic results is a more accurate application of the Water Framework Directive in Mediterranean rivers. Implications of future climate change should be also considered from our results.     

Implementation of a new index to assess intertidal seaweed communities as bioindicators for the European Water Framework Directory

An index CCO (cover, characteristic species, opportunistic species) has been developed for the implementation of the European Water Framework Directory (WFD) in coastal waters, using intertidal macroalgal communities as bio-indicator (Biological Quality Element). CCO is based on the calculation of three metrics corresponding to the global cover of macroalgal communities (metric 1), the number of characteristic species per topographic level/seaweed community (metric 2) and the cover of opportunistic species (metric 3). The final rating is obtained by pooling the scores of the three metrics. Results are given for 32 sites in 29 water bodies, grouped into four biogeographic regions along the Channel–Atlantic coasts of France. Over the six-year study, most of sites were sampled twice each (every three years). CCO index revealed that 25 coastal water bodies of both the Channel and the Bay of Biscay were in good or high ecological quality status (EQS), whereas only 4 of them were moderate and none in poor to bad status. However, significant differences have been found between sites and between geographic regions, water bodies located in Brittany obtaining the best EQS. No significant change occurred between the three-year sampling sets. A significant correlation has been established between a three-component anthropogenic pressure index and CCO ratings, showing the accuracy of CCO to evaluate the impact of anthropic activities on the structure and development of macroalgal communities as indicator of the ecological quality of coastal water bodies.     

High Meiofaunal and Nematodes Diversity around Mesophotic Coral Oases in the Mediterranean Sea

Although the mesophotic zone of the Mediterranean Sea has been poorly investigated, there is an increasing awareness about its ecological importance for its biodiversity, as fish nursery and for the recruitment of shallow water species. Along with coastal rocky cliffs, isolated coralligenous concretions emerging from muddy bottoms are typical structures of the Mediterranean Sea mesophotic zone. Coralligenous concretions at mesophotic depths in the South Tyrrhenian Sea were investigated to assess the role of these coralligenous oases in relation to the biodiversity of surrounding soft sediments. We show here that the complex structures of the coralligenous concretions at ca. 110 m depth influence the trophic conditions, the biodiversity and assemblage composition in the surrounding sediments even at considerable distances. Coral concretions not only represent deep oases of coral biodiversity but they also promote a higher biodiversity of the fauna inhabiting the surrounding soft sediments. Using the biodiversity of nematodes as a proxy of the total benthic biodiversity, a high turnover biodiversity within a 200 m distance from the coralligenous concretions was observed. Such turnover is even more evident when only rare taxa are considered and seems related to specific trophic conditions, which are influenced by the presence of the coralligenous structures. The presence of a high topographic complexity and the trophic enrichment make these habitats highly biodiverse, nowadays endangered by human activities (such as exploitation of commercial species such as Corallium rubrum, or trawling fisheries, which directly causes habitat destruction or indirectly causes modification in the sedimentation and re-suspension rates). We stress that the protection of the coralligenous sea concretions is a priority for future conservation policies at the scale of large marine ecosystems and that a complete census of these mesophotic oases of biodiversity should be a priority for future investigations in the Mediterranean Sea.     

Among-habitat and Temporal Variability of Selected Macroinvertebrate Based Metrics in a Mediterranean Shallow Lake (NW Spain)

According to the European Water Framework Directive, waterbodies have to be classified on the basis of their ecological status using biological quality elements, such as macroinvertebrates. This needs to take into consideration the influence of natural variation (both spatial and temporal) of reference biological communities as this may obscure the effects caused by anthropogenic disturbance. We studied the influence of among-habitat and temporal (seasonal and interannual) changes on the macroinvertebrate communities of an Iberian shallow lake and the variability of 21 measures potentially useful for bioindication purposes. Two series of data were examined: (a) macroinvertebrate samples taken on four occasions over an annual cycle were used to assess the effects of seasonality and among-habitat variability; (b) macroinvertebrate samples collected in three consecutive summers were used to assess interannual variability. Coefficients of variation, expressed as percentage, were used to quantify the effect of among-habitat and temporal variability on the selected metrics. According to our results, % Insecta, Shannon–Wiener diversity index and the qualitative taxonomic metrics (measures based on number of taxa) were robust in terms of temporal (seasonal and interannual) and among-habitat variability. Abundance ratio and some metrics based on functional feeding groups were highly variable. Therefore, qualitative taxonomic metrics may be promising tools in biomonitoring programs of Mediterranean shallow lakes due to their comparatively low variability.     

Aspetti Della Biocenosi Coralligena in Due Stazioni Dei Bacini Occidentale Ed Orientale Del Mediterraneo

Abstract

Facies of the coralligenous biocoenose in two stations of the Western and Eastern Mediterranean Basins. — The benthic comunities of circalittoral region have been studied by diving technique in the Western and Eastern Mediterranean Basins. The facies of the coralligenous biocoenose which show a larger difference between the two Basins are: 1) the communities of non calcareous algae in biotopes with constant direction depth streams and 2) the precoralligenous facies. These communities in the Aegean Sea are characterized by Sargassum linifolium, Cystoseira corniculata v. laxior, Caulerpa prolifera, Udotea petiolata, Dasycladus clavaeformis and by sponge Calix nicaeensis; in the Thyrrenean Sea by Laminaria rodriguezii, Cystoseira spinosa, Neurocaulon grandiflorum, Fauchea repens, Halymenia dichotoma, Callymenia reniformis and by the sponge Axinella cannabina. The environmental factors which determine these different facies in the circalittoral region of the two Mediterranean Basins are chiefly the temperature, the light intensity and the sedimentary rhythm.     

A comparative approach of assessing ecological status in two coastal areas of Eastern Mediterranean

This work presents an assessment of the ecological quality status of two marine coastal areas in the Aegean Sea (Greece, Eastern Mediterranean) based on the benthic macroinvertebrate quality element. S. Evvoikos and Thessaloniki gulfs, two coastal areas subjected to slight and heavier anthropogenic pressures, were selected to test the biotic index Bentix developed for the assessment of the ecological status. Other ecological indicators, such as the Shannon diversity index (H′), the species richness (S) and the AMBI biotic index were also applied and evaluated comparatively. Faunistic data were also used to interpret results. The resulting classification was validated with the use of physicochemical parameters and pressure information. This work also provides an insight into the structure of the Bentix classification scheme within the scope of its use in Water Framework Directive (WFD) implementation.     

A biotic index using the seagrass Posidonia oceanica (BiPo), to evaluate ecological status of coastal waters

The development of ecologically based indices that respond to disturbances in a predictable manner has been stressed by the EU Water Framework Directive. The seagrass Posidonia oceanica, given its ecological indicator characteristics, has been identified as one of the elements to determine ecological status under the EU Water Framework Directive. The purpose of this study is therefore to develop a biotic index based on P. oceanica (BiPo), focussing on: (i) the necessity of an index that may be applied over the largest geographical extent possible, (ii) the necessity of a tool for a baseline evaluation of P. oceanica status in the Mediterranean, (iii) the compliance with WFD requirements, (iv) the efficiency of the method in terms of reliability and cost. The BiPo index is developed on the basis of all P. oceanica monitoring data available in the western Mediterranean and on a standard assessment of anthropogenic pressures. The index metrics are selected and evaluated on the basis of this pressures assessment, and are subsequently integrated for the evaluation of ecological status. The index is then tested on 15 sites around Corsica (France). The results show that the BiPo well reflects meadow health status and ecological status. Furthermore it is reliable, standard and cost-effective, and can be applied to a wide array of management and conservation purposes.     

The use of a biotic index (Bentix) in assessing long-term effects of dumping coarse metalliferous waste on soft bottom benthic communities

The biotic index Bentix [Simboura, N., Zenetos, A., 2002. Benthic indicators to use in Ecological Quality classification of Mediterranean soft bottom marine ecosystems, including a new biotic index. Mediterr. Mar. Sci., 3 (2), 77–111] developed for the classification of ecological status of zoobenthic communities was tested in a Mediterranean coastal area (Aegean Sea, N. Evvoikos gulf, Greece) subject to coarse metalliferous waste discharge. The residues in the form of slag are the byproducts of the smelting procedure of a local ferronickel plant and are discharged in a permitted area 8 km from the shore. This practice adopted over the last 36 years has led to the formation of a thick underwater deposit of slag on the sea bottom. A decade of monitoring resulted to a long series of data on macrozoobenthos communities in the area. Application of the Bentix and other indices on the data has revealed the long-term impact of dumping on the benthic communities and the potential of the indices used to assess the community health. Among the indices tested, Bentix index succeeded in assessing the long-term trends of decline or recovery of the community health. The index proved efficient in detecting differences of the ecological status of the communities attributed to the transferring of the core of the dumping activity over the area studied, as validated by the geophysical data provided.     

Rapid biodiversity assessment and monitoring method for highly diverse benthic communities: a case study of mediterranean coralligenous outcrops

Increasing anthropogenic pressures urge enhanced knowledge and understanding of the current state of marine biodiversity. This baseline information is pivotal to explore present trends, detect future modifications and propose adequate management actions for marine ecosystems. Coralligenous outcrops are a highly diverse and structurally complex deep-water habitat faced with major threats in the Mediterranean Sea. Despite its ecological, aesthetic and economic value, coralligenous biodiversity patterns are still poorly understood. There is currently no single sampling method that has been demonstrated to be sufficiently representative to ensure adequate community assessment and monitoring in this habitat. Therefore, we propose a rapid non-destructive protocol for biodiversity assessment and monitoring of coralligenous outcrops providing good estimates of its structure and species composition, based on photographic sampling and the determination of presence/absence of macrobenthic species. We used an extensive photographic survey, covering several spatial scales (100s of m to 100s of km) within the NW Mediterranean and including 2 different coralligenous assemblages: Paramuricea clavata (PCA) and Corallium rubrum assemblage (CRA). This approach allowed us to determine the minimal sampling area for each assemblage (5000 cm(2) for PCA and 2500 cm(2) for CRA). In addition, we conclude that 3 replicates provide an optimal sampling effort in order to maximize the species number and to assess the main biodiversity patterns of studied assemblages in variability studies requiring replicates. We contend that the proposed sampling approach provides a valuable tool for management and conservation planning, monitoring and research programs focused on coralligenous outcrops, potentially also applicable in other benthic ecosystems.     

Macroalgae,a suitable indicator of the ecological status of coastal rocky communities in the NE Atlantic

Despite the great importance of shallow rocky communities (<30 m deep) due to their contribution to the biodiversity of coastal waters, most efforts in ecological status assessment of marine waters have been carried out in the implementation of soft bottom biotic indices. Therefore, in this paper, a methodology for the environmental evaluation of coastal rocky communities for the Bay of Biscay (NE Atlantic), the CFR index (Quality of Rocky Bottoms), is presented. This index is based on the analysis of seaweed communities throughout the depth gradient, from the intertidal to the shallow subtidal, through the combination of a multimetric approach, which combines the richness of characteristic macroalgae populations, their total cover, the presence of opportunistic species and the physiological condition of the whole macroalgae community. Quality thresholds for these indicators are based on both ecological data and expert judgment. Finally, a preliminary application of this metric to sites with theoretically good and bad environmental conditions is used to analyze the suitability of the index. As a result, the four selected indicators responded in a significant way to the pressure gradient tested, proving to be appropriate for the type of pressure analysed and obtaining coherent results in the final quality assessment with the CFR index. In conclusion, the CFR index has proved to be an effective tool for the assessment of the ecological quality of coastal rocky communities, based on the analysis of macroalgae assemblages.     

Freshwater diatom and macroinvertebrate diversity of coastal permanent ponds along a gradient of human impact in a Mediterranean eco-region

Mediterranean coastal areas are characterised by heavily transformed landscapes and an ever-increasing number of ponds are subjected to strong alterations. Although benthic diatoms and macroinvertebrates are widely used as indicators in freshwater ecosystems, little is still known about the diatom communities of lowland freshwater ponds in the Mediterranean region, and, furthermore, there are few macroinvertebrate-based methods to assess their ecological quality, especially in Italy. This article undertakes an analysis of benthic diatom and macroinvertebrate communities of permanent freshwater ponds, selected along a gradient of anthropogenic pressures, to identify community indicators (taxa and/or metrics) useful to evaluate the effect of human impacts. A series of 21 ponds were sampled along Tyrrhenian coast in central Italy. Five of these ponds, in a good conservations status and surrounded by woodland were selected as ‘reference sites’ for macroinvertebrates and epipelic diatoms. The remaining sixteen ponds were located in an agricultural landscape subject to different levels of human impact. The total number of macroinvertebrate taxa found in each pond was significantly higher in reference sites than in both the intermediate and heavily degraded ones, whereas the diatom species richness did not result in a good community variable to evaluate the pond ecological quality. The analysis revealed a substantial difference among the compositions of diatom communities between reference ponds and degraded ponds. The former were characterised by the presence of several species belonging to genera, such as Pinnularia sp., Eunotia sp., Stauroneis sp., Neidium sp., all of which were mostly absent from degraded ponds. Furthermore, the taxonomic richnesses of some macroinvetebrate groups (Odonata, Ephemeroptera, Trichoptera, Coleoptera), and taxa composition attributes of macroinvertebrate communities (total abundance, percentages of top three dominant taxa, percentages of Pleidae, Ancylidae, Hirudinea, Hydracarina) significantly correlated with variables linked with anthropogenic pressures. The results of the investigation suggested that diatoms tended more to reflect water chemistry through changes in community structure, whereas invertebrates responded to physical habitat changes primarily through changes in taxonomic richness. The methodologies developed for the analysis of freshwater benthic diatom and macroinvertebrate communities may have a considerable potential as a tool for assessing the ecological status of this type of water body, complying with the European Union Water Framework Directive 2000/60/EC. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users. Guest editors: B. Oertli, R. Cereghino, A. Hull & R. Miracle Pond Conservation: From Science to Practice. 3rd Conference of the European Pond Conservation Network, Valencia, Spain, 14–16 May 2008     

The suitability of the marine biotic index (AMBI) to new impact sources along European coasts

In recent years, several benthic biotic indices have been proposed to be used as ecological indicators in estuarine and coastal waters. One such indicator, the AZTI Marine Biotic Index (AMBI), was designed to establish the ecological quality of European coasts. The index examined the response of soft-bottom benthic communities to natural and man-induced disturbances in coastal and estuarine environments. It has been successfully applied to different geographical areas and under different impact sources, with increasing user numbers in European marine waters (Baltic, North Sea, Atlantic and Mediterranean). The AMBI has been used also for the determination of the ecological quality status (EcoQ) within the context of the European Water Framework Directive (WFD).In this contribution, 38 different applications including six new case studies (hypoxia processes, sand extraction, oil platform impacts, engineering works, dredging and fish aquaculture) are presented. The results show the response of the benthic communities to different disturbance sources in a simple way. Those communities act as ecological indicators of the ‘health’ of the system, indicating clearly the gradient associated with the disturbance.     

From depth to regional spatial genetic differentiation of Eunicella cavolini in the NW Mediterranean

Connectivity studies in the marine realm are of great importance to understand the evolutionary potential of populations in a context of growing pressures on the marine environment. Here, we investigated the effect of the local, regional, and depth spatial scale on the population genetic structure of the yellow gorgonian Eunicella cavolini, one of the most common octocoral species of the Mediterranean hard-bottom communities. This species, along with other sessile metazoans typical of coralligenous ecosystems, plays an important role in supporting biodiversity, but is also impacted by direct and indirect consequences of human activities, such as physical destruction or mortality events due to thermal anomalies. Samples were taken from 15 sites located in the Ligurian Sea (NW Mediterranean) in two adjacent regions 100 kilometres apart, i.e. from the areas of Marseille (France) and Portofino (Genoa, Italy), and were analysed using six microsatellite loci. A pattern of isolation by distance was observed at the regional as well as the local scales. Although E. cavolini showed less genetic structure than other Mediterranean octocorallian species, we observed a significant genetic differentiation between populations a few kilometres apart. A low genetic differentiation was also observed between shallow and deep populations. The occurrence of genetically differentiated populations of E. cavolini at the scale of kilometres has important consequences for the management of this species and of the associated communities.