C1-cycle of sulfur compounds

C₁ organic sulfides are part of many ecosystems and play an important role in the global sulfur budget and climate regulation. At this point, fluxes and conversions of these compounds are only superficially understood. Understanding of the regulating mechanisms will be necessary to quantify the role of these compounds in the global sulfur budget at their climatic role. In this review, the current knowledge of fluxes and conversions of C₁ organic sulfides in different ecosystems is presented.Abbreviations CCN cloud condensation nuclei - COS carbonylsulfide - DMS dimethylsulfide - DMDS dimethyldisulfide - DMSO dimethylsulfoxide - DMSO₂ dimethylsulfurdioxide - DMSP dimethylsulfoniopropionate - MA methylamine - 3-MPA 3-mercaptopropionate - MPPA 3-methiolpropionate - MT methanethiol     

The dependence of heterotrophic consumption and C accumulation on autotrophic nutrient content in ecosystems

Primary producers with high nutrient contents typically exhibit high herbivory rates and fast decomposition rates. These tendencies, however, have not been generalized across ecosystems with contrasting herbivore characteristics and abiotic properties. Here we demonstrate that ecosystem types dominated by richer autotrophs (i.e. higher nutrient contents) are subject to higher rates of herbivory and decomposition in spite of differences in herbivore characteristics and environmental conditions. We further show that, as a result of these tendencies, ecosystems with richer autotrophs accumulate less carbon. These results identify autotrophic nutrient content as a main control of heterotrophic consumption and carbon accumulation in ecosystems. They also provide a basis to evaluate changes in these ecosystem properties following anthropogenic eutrophication.     

Distinguishing Rapid and Slow C Cycling Feedbacks to Grazing in Sub-arctic Tundra

Ecosystems - Large grazers are known to affect ecosystem functioning even to the degree where ecosystems transition to another vegetation state. Alongside the vegetation change, several features of...     

C: N: P stoichiometry and specific growth rate of clover colonized by arbuscular mycorrhizal fungi

Ecological stoichiometry has been widely applied in aquatic ecosystems, but has limited implications in terrestrial ecosystems. The pot experiments with Trifolium repens L. were conducted to demonstrate the relations between C: N: P, biological components and growth rate of clover colonized by arbuscular mycorrhizal (AM) fungi. The results showed that for mycorrhizal clover, N, P concentrations increased with increasing growth rate, in support of the Growth Rate Hypothesis (GRH). Mycorrhizal clover had higher P and RNA concentrations than non-mycorrhizal clover, indicating that the increase in P concentration would invest more RNA to meet the synthesis of protein. Results also indicated that the increase in N concentration with rapid growth rate may be attributed to the increase in the concentration of protein N. Underlying mechanisms driving the association of C: N: P with growth rate for symbiotic partners should help elucidate the allocation of major nutrients to cellular organs and trophic dynamics in terrestrial ecosystems.     

Winter climate change effects on soil C and N cycles in urban grasslands

Despite growing recognition of the role that cities have in global biogeochemical cycles, urban systems are among the least understood of all ecosystems. Urban grasslands are expanding rapidly along with urbanization, which is expected to increase at unprecedented rates in upcoming decades. The large and increasing area of urban grasslands and their impact on water and air quality justify the need for a better understanding of their biogeochemical cycles. There is also great uncertainty about the effect that climate change, especially changes in winter snow cover, will have on nutrient cycles in urban grasslands. We aimed to evaluate how reduced snow accumulation directly affects winter soil frost dynamics, and indirectly greenhouse gas fluxes and the processing of carbon (C) and nitrogen (N) during the subsequent growing season in northern urban grasslands. Both artificial and natural snow reduction increased winter soil frost, affecting winter microbial C and N processing, accelerating C and N cycles and increasing soil : atmosphere greenhouse gas exchange during the subsequent growing season. With lower snow accumulations that are predicted with climate change, we found decreases in N retention in these ecosystems, and increases in N₂O and CO₂ flux to the atmosphere, significantly increasing the global warming potential of urban grasslands. Our results suggest that the environmental impacts of these rapidly expanding ecosystems are likely to increase as climate change brings milder winters and more extensive soil frost.     

Flow regime alteration effects on the organic C dynamics in semiarid stream ecosystems

There is evidence of an ongoing alteration of the flow regime owing to climate change forcing, which has resulted in substantial increases in the frequency and magnitude of extreme events such as floods and droughts. Such changes in the flow regime may have major implications in freshwater ecosystems and, in particular, in the organic carbon dynamics in semiarid stream ecosystems. Much is known about the role of extreme flow events on structuring stream ecosystems, but few studies explored the effects of extreme flow events magnitude, timing, and sequence on stream ecosystems. To assess the effect of extreme events on stream organic C dynamics, a simple and flexible modeling approach was applied to simulate the organic carbon dynamics in a simplified river reach. The river reach model was initially calibrated and tested using long-term data for stream water velocity and amount of organic carbon in sediment. After that, multiple scenarios differing in the extreme flow events (floods and droughts) sequence and magnitude were used to simulate the effects of possible flow regime changes on the stream organic carbon dynamics. Initial expectations were that: (i) an increase in the magnitude or frequency of extreme flow events would reduce the amount of organic carbon respired within the simulated river reach, and (ii) relationship between the timings of the extreme flow events and of the litterfall input would influence considerably the effects of the extreme flow events. Results pointed out that: (i) the amount of processed carbon respect the amount entering the ecosystem was affected by extreme events such floods and droughts, but the relevance of those events differed along the year, with a maximal effect during the litterfall period; (ii) extreme event timing rather than the magnitude was more relevant to the stream organic carbon dynamics; and (iii) the amount of respired carbon in the ecosystem could be amplified or reduced depending on event sequence. Increasing awareness of the role of inland waters in the global carbon cycle and the shaping role of hydrology on the stream organic carbon dynamics stress the need to better quantify carbon fluxes and the hydrological controls on these fluxes.     

Mechanisms of C Sequestration in Soils of Latin America

Carbon (C) sequestration, defined as the process whereby atmospheric CO₂ is transferred into a long-lived C pool, is an important issue not only in the scientific community but also in the society at large because of its potential role in off-setting fossil fuel emissions. Through photosynthesis this C is stored in plants and through decomposition, trunks, branches, leaves and roots are incorporated in the soil via the action of different soil organisms, i.e., bacteria, fungi and invertebrates. This, together with the C exudates from roots that are utilized by microbial populations, constitutes the natural pathways of incorporating biomass-C into the soil. The amount of C stored in terrestrial ecosystems is the third largest among the global C pools. Soil organic carbon (SOC) up to 3 m is 2,344 Pg C (1 Petagram = 10¹⁵ g), and the SOC pool in tropical soils is approximately 30% of the global pool. Abiotic factors, which moderate C sequestration in soils are clay content, mineralogy, structural stability, landscape position, and soil moisture and temperature regimes. On the other hand, biotic factors involved in soil C sequestration are determined by the activities of soil organisms. However, models do not include the formation, stabilization and lifespan of the aggregates that have been biologically produced, including roots. This is not only due to the lack of studies on this subject, but also to overlooking the role of soil organisms in soil aggregation. Furthermore, there is a lack of comprehensive knowledge regarding the processes that control dissolved organic carbon (DOC) fluxes in soils and its role in the global budget of C sequestration. The boundaries of ecosystems are not considered in the studies of the subject, as it may be the case for terrestrial C sequestration, since the borders around the sites under study constitute pathways for the flow of C between sites and through the landscape. The concentrations of DOC in deep soil horizons and the contribution to DOC fluxes (exports) are relatively small, from 4 to 37 g DOC m^?2 yr^?1 retained in the mineral subsoil. In South America, although substantial research has been done under different ecosystems and land use systems in some countries, like Brazil, Colombia, Argentina, there is a need to conduct more studies with agreed standard methodologies in natural ecosystems and agricultural systems, and in other areas of Central America few studies have been undertaken to date. The principal objective of this review was to address the main mechanisms that determine SOC and SIC sequestration in soils of Latin America, and include: physical aggregate protection, SOC-clay interaction, DOC transport, bioturbation by soil organisms, and the formation of secondary carbonates. All of these mechanisms are generally explained by physical and chemical processes. In contrast, this review takes a soil ecological approach to describe the mechanisms listed above.     

土壤微生物生物量碳氮磷与土壤酶化学计量对气候变化的响应机制

微生物和土壤酶是陆地生态系统中生物地球化学循环的重要驱动力,深入理解微生物在生态系统中的调节作用以及气候变化过程中微生物量和土壤酶的响应机制是生态学领域关注的重要科学问题.本研究从气候因素角度出发,基于生态化学计量学理论,综述了微生物和土壤酶在陆地生态系统碳氮磷循环中的作用,以及土壤微生物生物量碳氮磷和土壤酶化学计量对气候变化的响应机制,即: 改变微生物代谢速率和酶活性;调整微生物群落结构;调整微生物生物量碳氮磷与土壤酶化学计量特征;改变碳氮磷养分元素利用效率.最后分析当前研究的不足,并提出了该领域亟待解决的科学问题: 综合阐明土壤微生物和土壤酶对气候变化的响应机制;探究土壤微生物和胞外酶养分耦合机理;深入探究土壤微生物量和土壤酶化学计量特征对气候变化的适应对策.     

C:N:P stoichiometry in soil: is there a “Redfield ratio” for the microbial biomass?

Well-constrained carbon:nitrogen:phosphorus (C:N:P) ratios in planktonic biomass, and their importance in advancing our understanding of biological processes and nutrient cycling in marine ecosystems, has motivated ecologists to search for similar patterns in terrestrial ecosystems. Recent analyses indicate the existence of “Redfield-like” ratios in plants, and such data may provide insight into the nature of nutrient limitation in terrestrial ecosystems. We searched for analogous patterns in the soil and the soil microbial biomass by conducting a review of the literature. Although soil is characterized by high biological diversity, structural complexity and spatial heterogeneity, we found remarkably consistent C:N:P ratios in both total soil pools and the soil microbial biomass. Our analysis indicates that, similar to marine phytoplankton, element concentrations of individual phylogenetic groups within the soil microbial community may vary, but on average, atomic C:N:P ratios in both the soil (186:13:1) and the soil microbial biomass (60:7:1) are well-constrained at the global scale. We did see significant variation in soil and microbial element ratios between vegetation types (i.e., forest versus grassland), but in most cases, the similarities in soil and microbial element ratios among sites and across large scales were more apparent than the differences. Consistent microbial biomass element ratios, combined with data linking specific patterns of microbial element stoichiometry with direct evidence of microbial nutrient limitation, suggest that measuring the proportions of C, N and P in the microbial biomass may represent another useful tool for assessing nutrient limitation of ecosystem processes in terrestrial ecosystems.     

Carbon dioxide starvation,the development of C4 ecosystems,and mammalian evolution.

The decline of atmospheric CO2 over the last 65 million years (Ma) resulted in the ''CO2-starvation'' of terrestrial ecosystems and led to the widespread distribution of C4 plants, which are less sensitive to CO2 levels than are C3 plants. Global expansion of C4 biomass is recorded in the diets of mammals from Asia, Africa, North America, and South America during the interval from about 8 to 5 Ma. This was accompanied by the most significant Cenozoic faunal turnover on each of these continents, indicating that ecological changes at this time were an important factor in mammalian extinction. Further expansion of tropical C4 biomass in Africa also occurred during the last glacial interval confirming the link between atmospheric CO2 levels and C4 biomass response. Changes in fauna and flora at the end of the Miocene, and between the last glacial and interglacial, have previously been attributed to changes in aridity; however, an alternative explanation for a global expansion of C4 biomass is CO2 starvation of C3 plants when atmospheric CO2 levels dropped below a threshold significant to C3 plants. Aridity may also have been a factor in the expansion of C4 ecosystems but one that was secondary to, and perhaps because of, gradually decreasing CO2 concentrations in the atmosphere. Mammalian evolution in the late Neogene, then, may be related to the CO2 starvation of C3 ecosystems.     

The Role of Heterotrophic Microbial Communities in Estuarine C Budgets and the Biogeochemical C Cycle with Implications for Global Warming: Research Opportunities and Challenges

Estuaries are among the most productive and economically important marine ecosystems at the land–ocean interface and contribute significantly to exchange of CO₂ with the atmosphere. Estuarine microbial communities are major links in the biogeochemical C cycle and flow of C in food webs from primary producers to higher consumers. Considerable attention has been given to bacteria and autotrophic eukaryotes in estuarine ecosystems, but less research has been devoted to the role of heterotrophic eukaryotic microbes. Current research is reviewed here on the role of heterotrophic eukaryotic microbes in C biogeochemistry and ecology of estuaries, with particular attention to C budgets, trophodynamics, and the metabolic fate of C in microbial communities. Some attention is given to the importance of these processes in climate change and global warming, especially in relation to sources and sinks of atmospheric CO₂, while also documenting the current paucity of research on the role of eukaryotic microbes that contribute to this larger question of C biogeochemistry and the environment. Some recommendations are made for future directions of research and opportunities of applying newer technologies and analytical approaches to a more refined analysis of the role of C in estuarine microbial community processes and the biogeochemical C cycle.     

Linking Improvement of Soil Structure to Soil Carbon Storage Following Invasion by a C4 Plant Spartina alterniflora

Ecosystems - Coastal wetlands are increasingly recognized as important ecosystems for long-term carbon (C) storage. However, how soil aggregation mediates C accumulation and sequestration in these...     

Phosphorus availability and arbuscular mycorrhizal fungi limit soil C cycling and influence plant responses to elevated CO2 conditions

Biogeochemistry - Understanding N budgets of tundra ecosystems is crucial for projecting future changes in plant community composition, greenhouse gas balances and soil N stocks. Winter warming can...     

Effects of human disturbance on soil aggregates content and their organic C stability in Karst regions

Taking the primary forest land (PF), natural restoration land (NR), grazing grassland burned annually in winter (GB), and maize-sweet potato cropland (MS) in Karst regions of Northwest Guangxi as test objects, this paper studied the soil aggregates content and their organic C stability in the four ecosystems under different human disturbance patterns. The soil water-stable aggregates (>0.25 mm) content in PF, NR, and GB accounted for more than 70%, while that in MS was only 37%. The destruction rate of soil aggregates structure in the four ecosystems decreased in the sequence of MS (54.9%) > GB (23.2%) > NR (9.8%) and PF (9.6%), with significant differences among them (P<0.05). With increasing incubation time, the mineralization rate of soil aggregate organic C decreased after an initial increase and kept stable after 20 days, and increased with decreasing aggregate size. In the same size aggregates, the mineralization rate of organic C in the four ecosystems increased in the sequence of MS < GB and NR < PF. In PF, the mineralization ratio of soil organic C was 1.7% - 3.8%, being significantly higher than that in NR, GB, and MS. The cumulative mineralization amount of soil organic C had the same change trend with the mineralization rate. The contents of soil organic C and aggregate organic C were significantly positively correlated with the mineralization rate and cumulative mineralization amount of organic C, respectively, and significantly negatively correlated with the mineralization ratio of organic C.     

C4 photosynthesis, atmospheric CO2, and climate

The objectives of this synthesis are (1) to review the factors that influence the ecological, geographical, and palaeoecological distributions of plants possessing C₄ photosynthesis and (2) to propose a hypothesis/model to explain both the distribution of C₄ plants with respect to temperature and CO₂ and why C₄ photosynthesis is relatively uncommon in dicotyledonous plants (hereafter dicots), especially in comparison with its widespread distribution in monocotyledonous species (hereafter monocots). Our goal is to stimulate discussion of the factors controlling distributions of C₄ plants today, historically, and under future elevated CO₂ environments. Understanding the distributions of C₃/C₄ plants impacts not only primary productivity, but also the distribution, evolution, and migration of both invertebrates and vertebrates that graze on these plants. Sixteen separate studies all indicate that the current distributions of C₄ monocots are tightly correlated with temperature: elevated temperatures during the growing season favor C₄ monocots. In contrast, the seven studies on C₄ dicot distributions suggest that a different environmental parameter, such as aridity (combination of temperature and evaporative potential), more closely describes their distributions. Differences in the temperature dependence of the quantum yield for CO₂ uptake (light-use efficiency) of C₃ and C₄ species relate well to observed plant distributions and light-use efficiency is the only mechanism that has been proposed to explain distributional differences in C₃/C₄ monocots. Modeling of C₃ and C₄ light-use efficiencies under different combinations of atmospheric CO₂ and temperature predicts that C₄-dominated ecosystems should not have expanded until atmospheric CO₂ concentrations reached the lower levels that are thought to have existed beginning near the end of the Miocene. At that time, palaeocarbonate and fossil data indicate a simultaneous, global expansion of C₄-dominated grasslands. The C₄ monocots generally have a higher quantum yield than C₄ dicots and it is proposed that leaf venation patterns play a role in increasing the light-use efficiency of most C₄ monocots. The reduced quantum yield of most C₄ dicots is consistent with their rarity, and it is suggested that C₄ dicots may not have been selected until CO₂ concentrations reached their lowest levels during glacial maxima in the Quaternary. Given the intrinsic light-use efficiency advantage of C₄ monocots, C₄ dicots may have been limited in their distributions to the warmest ecosystems, saline ecosystems, and/or to highly disturbed ecosystems. All C₄ plants have a significant advantage over C₃ plants under low atmospheric CO₂ conditions and are predicted to have expanded significantly on a global scale during full-glacial periods, especially in tropical regions. Bog and lake sediment cores as well as pedogenic carbonates support the hypothesis that C₄ ecosystems were more extensive during the last glacial maximum and then decreased in abundance following deglaciation as atmospheric CO₂ levels increased. Received: 12 February 1997 / Accepted: 20 June 1997     

Enhanced precipitation promotes decomposition and soil C stabilization in semiarid ecosystems,but seasonal timing of wetting matters

Plant and Soil - Changing precipitation regimes in semiarid ecosystems will affect the balance of soil carbon (C) input and release, but the net effect on soil C storage is unclear. We asked how...     

全球气候变化对陆地植物碳氮磷生态化学计量学特征的影响

全球气候变化背景下生物地球化学循环的响应规律和陆地植物适应对策已受到广泛关注.本文在分析气候变暖和降水变化对不同生态系统植物C∶N∶P的影响、CO₂浓度升高对不同光合途径物种元素的影响,以及氮沉降对土壤 植物元素影响的短期和长期效应等基础上,从植物生理特性和土壤有效营养元素变化等方面揭示了其可能存在的内在机理,以期为研究C、N、P化学元素在土壤 植物之间传递与调节机制、陆地生态系统结构和功能,以及生物地球化学元素循环对气候变化的响应提供理论依据.最后提出了该领域研究中存在的问题及对今后研究的展望.     

Broad-Scale Patterns of Soil Carbon (C) Pools and Fluxes Across Semiarid Ecosystems are Linked to Climate and Soil Texture

Ecosystems - Dryland (semiarid and arid) ecosystems are responsible for most of the interannual variation in atmospheric CO2 concentrations and contain a considerable fraction of the globe’s...     

13C NMR studies of bacterial fermentations.

We describe the experimental methods used and the constraints that apply in studies of anaerobic cell metabolism by 13C NMR. We review some of the results of our recent work in this area. Clostridium neopropionicum was shown to ferment ethanol into propionate by the acrylate, non-randomizing pathway. The same metabolic route accounts for 50% of the propionate formed in the complex ecosystem that inhabits the pig's large intestine. The rest is formed via the randomizing succinate pathway. Reductive, hydrogenotrophic acetogenesis was studied in several ecosystems. Although it is usually overshadowed by methanogenesis in the competition for hydrogen, it may become an efficient electron sink when methane biosynthesis is blocked by a specific inhibitor.     

Interactive effects of vegetation and water table depth on belowground C and N mobilization and greenhouse gas emissions in a restored peatland

Plant and Soil - Through agriculture and industry, humans are increasing the deposition and availability of nitrogen (N) in ecosystems worldwide. Carbon (C) isotope tracers provide useful insights...