miR-148a在5-aza诱导间充质干细胞心肌样分化中的调控作用及机制

目的：探讨miR-148a在5-aza诱导人骨髓间充质（hMSCs）成心肌样分化中的表达及miR-148a对hMSCs体外成心肌样分化的生物学作用。方法：免疫荧光检测5-aza诱导hMSCs分化后心肌细胞特异性标志物α-MHC表达水平;qRT-PCR和Western blot分别检测miR-148a和DNMT1在hMSCs成肌样分化中的表达水平。利用Lipofectamine TM 2000将miR-148a mimics和miR-148a inhibitor分别瞬时转染hMSCs,Western blot检测心肌细胞特异性标志物α-MHC的蛋白表达水平。利用生物信息学技术预测miR-148a的靶基因结合位点利用双荧光素酶报告基因系统鉴定其对靶基因3'UTR的结合序列。通过DNMT1 shRNA和miR-148a inhibitors共转到hMSCs中,研究miR-148a在hMSCs成心肌样分化中的调控作用。结果：hMSCs经5-aza诱导分化后,心肌细胞特性标志物α-MHC蛋白水平明显上调。miR-148a在hBMSCs成肌样分化中显著性增加（P<0.01）,DNMT1表达水平显著降低。过表达miR-148a能提高hBMSC中心肌细胞特异性标志物α-MHC表达水平,而抑制miR-148a则能降低其水平（P<0.01）。DNMT1沉默可以阻断miR-148a对hMSCs的诱导成肌样分化作用。结论：miR-148a在hMCCs成肌样分化中表达上调,通过靶定和调控DNMT1基因的表达,并对hMSCs心肌向分化具有正向调控作用。     

家蚕miR-301对化学感受蛋白基因csp9表达的调控

【目的】探索家蚕Bombyx mori miRNAs对化学感受蛋白基因表达的调控作用,以进一步研究miRNAs及其靶基因在昆虫化学识别中的作用。【方法】利用生物信息学方法预测和筛选可能作用于家蚕化学感受蛋白CSPs基因家族成员的miRNAs;实时荧光定量PCR分析预测获得的候选miR-301和其作用的靶基因在家蚕成虫不同组织中的表达变化;构建miR-301预测靶基因3′-UTR的双荧光素酶报告载体,与合成的miR-301 mimics或阴性对照转染人胚肾细胞HEK293,通过双荧光素酶报告基因检测系统中荧光素酶活性变化检测miR-301对其靶基因表达的调控作用。【结果】生物信息学分析结果发现,家蚕化学感受蛋白基因csp9是miR-301的预测靶基因,二者的结合位点位于csp9的3′-UTR区。实时荧光定量PCR检测结果表明,miR-301在交配后家蚕雌雄成虫触角和雄成虫头部都显著上调表达,靶基因csp9在对应组织中表达则显著下调。二者共转染HEK293细胞后,双荧光素酶检测结果表明,miR-301可以通过与csp9 3′-UTR的互作,显著抑制上游荧光素酶报告基因的表达。【结论】家蚕化学感受蛋白基因csp9是miR-301的靶基因,miR-301通过与靶基因3′-UTR的结合,在翻译水平上抑制csp9的表达。     

MicroRNA-1在心肌肥大中对L-型钙通道β2亚基的负性调控作用

目的:研究微小RNA-1(microRNA-1,miR-1)在心肌细胞肥大中对L-型钙通道β2亚基(Cavβ2)的负性调控作用及机制。方法:应用异丙肾上腺素(ISO)诱导心肌细胞肥大;采用HJ2000通用图像分析系统测定心肌细胞表面积;应用数据库microCosm预测miR-1的靶基因;构建含Cavβ23’UTR报告基因质粒和miR-1瞬时共转染HEK293细胞,验证Cavβ2为miR-1靶基因;应用qRT-PCR或Western blot方法检测心房钠尿肽(ANP)、β-肌球蛋白重链(β-MHC)、miR-1和Cavβ2mRNA和蛋白表达水平;转染miR-1模拟物上调miR-1或应用Cavβ2RNAi干扰Cavβ2蛋白的表达,观察对心肌细胞肥大的影响。结果:①在ISO诱导的心肌细胞肥大中,miR-1表达显著下降;应用miR-1 mimic转染心肌细胞使miR-1表达上调,心肌细胞表面积、ANP和β-MHC mRNA表达均显著低于ISO组(P<0.05)。②网络数据库预测显示Cavβ2为miR-1的潜在靶点;将miR-1和含Cavβ23’UTR报告基因质粒共转染HEK293细胞,其萤光值显著降低(P<0.01)。转染miR-1 mimic使心肌细胞miR-1表达上调,可以明显抑制Cavβ2蛋白的表达。③在ISO诱导心肌细胞肥大中Cavβ2表达较对照组显著增加;应用RNAi技术下调Cavβ2表达可明显抑制心肌细胞表面积、ANP和β-MHC mRNA表达的增加。结论:预测并验证L-型钙通道β2亚基为miR-1的靶基因。miR-1可能通过抑制其靶基因Cavβ2蛋白的表达,降低细胞内钙离子浓度,抑制心肌细胞肥大。     

miR-101抑制凋亡基因调控胰腺癌发生发展的初步研究

目的：研究miR-101在胰腺癌组织中的表达水平及其作用机制。方法：采用实时定量PCR的方法分别检测36例胰腺癌手术切除标本及对应癌旁组织中miR-101的表达水平;运用生物信息学的方法预测其可能的靶基因;通过双荧光素酶报告基因系统验证miR-101与可能靶基因之间的关系。结果：胰腺癌组织中miR-101的表达水平较癌旁组织明显降低（P〈0.01）。生物信息学分析和双荧光素酶报告基因系统结果显示Mcl-1和Ezh2基因可能是miR-101的靶基因。结论：胰腺癌组织中miR-101表达降低,可能通过抑制胰腺癌细胞中Mcl-1和Ezh2基因的表达调控胰腺癌的发生发展。     

胶质瘤细胞中miR-223对PAX6基因3'非翻译区的调控作用

目的:明确miR-223在胶质瘤细胞中对PAX6基因3'-UTR的靶向调控作用。方法:生物信息学软件预测PAX6基因3'-UTR的靶向miRNAs;分别构建野生型和突变型PAX6基因3'-UTR双荧光素酶报告基因质粒;共转染miR-223 mimics与野生型和突变型双荧光素酶报告基因质粒于U251细胞中,双荧光素酶检测系统测定荧光素酶活性。结果:生物信息学软件预测显示PAX6可能是miR-223的靶基因;与转染野生型PAX6 3'-UTRpsiCHECKTM-2质粒组和转染突变型PAX6 Mut 3'-UTR-psiCHECKTM-2质粒组相比,miR-223 mimics能明显降低野生型荧光素酶质粒活性。结论:miR-223能够靶向负性调控PAX6基因3'-UTR的活性。     

miR-126报告基因载体的构建及其功能鉴定

目的:根据miR-126的预测靶点构建荧光素酶报告基因重组质粒,并进行功能鉴定。方法:利用sanger数据库提供的miR-126靶序列设计引物,PCR扩增目的微小RNA(microRNAs,miRNAs)靶基因3'非编码区(three-prime untranslated regions,3'UTRs)序列,PCR产物双酶切,后连入经过同样双酶切的pGL3-control载体中,连接产物转化大肠杆菌DH5α,进行阳性克隆鉴定。同样,将候选靶基因3'UTRs突变,突变型3'UTR克隆入pGL3-control报告载体,构建野生型和突变型的报告基因重组质粒。将野生型和突变型的报告基因载体分别和化学合成的microRNA以及内参质粒共转染293TN细胞,进行双荧光素酶检测。结果:成功构建miR-126报告基因野生型和突变型重组质粒pGL3-VEGF-A-3'UTR和pGL3-VEGF-A-3'UTR,质粒测序及酶切结果完全正确。瞬时转染实验显示,过表达miR-126能直接抑制VEGF-A-3'UTRs报告基因活性。结论:miR-126对VEGF-A具有靶向调节功能。     

miR-217参与高糖诱导的内皮细胞凋亡的调控

目的:研究miR-217对高糖诱导的内皮刺激内皮细胞凋亡的作用。方法:培养人冠状动脉内皮细胞,用含D-葡萄糖(30mmol/L)的培养液刺激:(1)利用实时定量PCR检测内皮细胞相关微小RNA(miR-217、miR-137、miR-29c、miR-218、miR-451、miR-328、miR-517c和miR-216a等)的表达变化;(2)利用慢病毒感染技术干预内皮细胞miR-217水平,利用流式细胞术检测细胞凋亡水平;(3)生物信息学预测、双荧光素酶报告基因验证以及蛋白免疫印迹法(western blot)确定miR-217的靶基因。结果:(1)实时定量PCR检测发现高糖刺激内皮细胞后,miR-217、miR-137、miR-29c、miR-218等的表达上调(P0.01),miR-451、miR-328、miR-517c和miR-216a的表达下调(P0.01),其中miR-217比对照细胞升高了5.67倍;(2)慢病毒感染内皮细胞后再经高糖刺激,流式细胞术检测发现过表达miR-217的内皮细胞凋亡水平有显著提高;(3)生物信息学分析发现SIRT1基因的3'非翻译区上存在一个miR-217的结合位点,双荧光素酶报告基因和western blot结果均证明SIRT1是miR-217的靶基因。结论:miR-217可能通过抑制SIRT1的表达参与高糖诱导的内皮细胞凋亡的调控。     

miR-9 在卵巢癌细胞上皮间质转化中的初步研究

目的:研究miR-9在卵巢癌细胞上皮间质转化(EMT)中的作用。方法:上调或者下调miR-9后,在RNA水平上通过RT-qPCR检测卵巢癌细胞系SKOV3和A2780中上皮指标E-cadherin表达变化;在蛋白水平,通过western blotting方法检测2株细胞系中上皮指标E-cadherin和间质指标vimentin蛋白表达变化。生物信息学预测可能靶向E-cadherin 3'UTR的miR NA,双荧光素酶报告系统进一步验证miR-9靶向结合E-cadherin的3'UTR区。结果:上调miR-9后,卵巢癌细胞系中E-cadherin表达受到明显抑制,vimentin表达明显增加;反之,下调miR-9后,E-cadherin表达明显增高,vimentin表达明显降低。通过生物信息学预测发现miR-9可以直接靶向E-cadherin的3'UTR区,荧光素酶报告系统验证预测结果正确。结论:miR-9促进卵巢癌细胞上皮间质转化。     

双荧光素酶报告系统鉴定miR-204对水通道蛋白1基因的调控作用

[目的]构建水通道蛋白1(AQP1)基因3'-UTR双荧光素酶报告载体,并验证miR-204与AQP1基因的靶向调控关系。[方法]采用生物信息学软件预测miR-204与AQP1基因的结合位点;荧光定量PCR法(qRT-PCR)检测转染miR-204抑制剂前后miR-204及AQP1在K562细胞中的表达改变;构建AQP1-3'UTR野生型及突变型重组质粒,与miR-204、阴性对照共转染至293T细胞中,双荧光素酶报告系统检测各组荧光素酶活性。[结果]转染miR-204抑制剂后,miR-204表达量较阴性对照及空白对照组明显下降,分别为1. 97、9. 32、11. 25(P 0. 01);而AQP1基因表达显著增高,分别为13. 14、2. 29、2. 54(P 0. 01);酶切及测序结果表明已成功构建psi CHECKTM-2-AQP1 3'-UTR野生型和突变型重组质粒。荧光素酶活性结果表明,miR-204可使野生型AQP1 3'-UTR质粒荧光素酶活性降低约65. 9%,而对突变型质粒荧光素酶活性没有显著影响。[结论]成功构建了AQP1基因3'-UTR的荧光素酶报告基因载体,miR-204对AQP1存在靶向调控。     

Bmo-miR-375-3p对家蚕丝素蛋白轻链基因BmFib-L表达的调控作用

【目的】探究家蚕Bombyx mori miRNAs对丝素蛋白轻链基因(fibroin light chain gene,Bm FibL)和P25蛋白基因Bm P25表达的调控作用。【方法】分别以Bm Fib-L和Bm P25 mRNA 3'UTR为靶序列,应用在线预测软件RNAhybrid从前期家蚕4和5龄幼虫后部丝腺(posterior silk gland)sRNA高通量测序获得的29个差异表达bmo-miRNAs中,筛选对Bm Fib-L和Bm P25具有调控作用的候选bmo-miRNAs;采用半定量RT-PCR方法在mRNA水平分析候选bmo-miRNAs及其靶基因Bm Fib-L和Bm P25在4和5龄幼虫期以及5龄第3天幼虫不同组织的表达水平;利用双荧光报告基因检测系统在家蚕细胞Bm N中验证候选bmo-miRNAs对Bm Fib-L和Bm P25表达的调控作用。【结果】筛选到一个在Bm Fib-L和Bm P25 mRNA 3'UTR上都有靶位点的bmo-miR-375-3p(曾称bmo-miR-375*)。在后部丝腺中bmo-miR-375-3p和其预测靶基因Bm Fib-L和Bm P25都有较高的表达水平,提示bmo-miR-375-3p具备调控Bm Fib-L和Bm P25表达的时空条件。miR-375-3p重组表达载体与融合了Bm Fib-L 3'UTR的萤火虫荧光素酶(luciferase)报告基因(luc)表达载体共转染Bm N细胞,报告基因luc的表达水平显著下降;而在miR-375-3p重组表达载体与融合了Bm P25 3'UTR的luc表达载体共转染Bm N细胞中报告基因luc的表达水平下降不显著。【结论】miR-375-3p显著下调Bm Fib-L基因的表达,而对Bm P25基因的表达无明显调控作用。     

Recent advances in the study of Kaposi's sarcoma-associated herpesvirus replication and pathogenesis

It has now been over twenty years since a novel herpesviral genome was identified in Kaposi's sarcoma biopsies. Since then, the cumulative research effort by molecular biologists, virologists, clinicians, and epidemiologists alike has led to the extensive characterization of this tumor virus, Kaposi's sarcoma-associated herpesvirus(KSHV; also known as human herpesvirus 8(HHV-8)), and its associated diseases. Here we review the current knowledge of KSHV biology and pathogenesis, with a particular emphasis on new and exciting advances in the field of epigenetics. We also discuss the development and practicality of various cell culture and animal model systems to study KSHV replication and pathogenesis.     

The structure, reproduction and taxonomy of Vidalia and Osmundaria (Rhodophyta, Rhodomelaceae)

Comprises species occurring mostly in subtidal habitats in tropical, subtropical and warm-temperate areas of the world. An analysis of the type species, V. spiralis (Sonder) Lamouroux ex J. Agardh, a species from Australia, establishes basic characters for distinguishing species in the genus. These characters are (1) branching patterns of thalli, (2) flat blades that may be spiralled on their axis, (3) width of the blade, (4) primary or secondary derivation of sterile and fertile branchlets and (5) position of sterile and fertile branchlets on the thalli. Application of the latter two characters provides an important basic method for separation of species into three major groups. Osmundaria , a genus known only in southern Australia, was studied in relation to Vidalia , and its separation from the Vidalia assemblage is not accepted. Species of Vidalia therefore are transferred to the older genus name, Osmundaria. Two new species, Osmundaria papenfussii and Osmundaria oliveae are described from Natal. Confusion in the usage of the epithet, Vidalia fimbriala Brown ex Turner has been clarified, and Vidalia gregaria Falkenberg, described as an epiphyte on Osmundaria pro/ifera Lamouroux, is revealed to be young branches of the host, Osmundaria prolifera.     

New or rare chromosome counts in Artemisia L. (Asteraceae, Anthemideae) and related genera from Kazakhstan

Fifteen chromosome counts of six Artemisia taxa and one species of each of the genera Brachanthemum, Hippolytia, Kaschgaria, Lepidolopsis and Turaniphytum are reported from Kazakhstan. Three of them are new reports, two are not consistent with previous counts and the remainder are confirmations of very scarce (one to four) earlier records. All the populations studied have the same basic chromosome number, x = 9, with ploidy levels ranging from 2x to 6x. Some correlations between ploidy level, morphological characters and distribution are noted.     

肝癌中HBV和HCV基因和抗原的分布及意义

采用原位分子杂交方法检测HCV RNA及HBV X基因;采用免疫组织化学方法研究HCV核心抗原,非结构区C33c抗原及HBxAg在肝细胞肝癌中的定位及分布.结果表明(1)HCV RNA、HBV X基因在肝细胞肝癌组织检出率分别为40%(55/136)和82%(112/136).HCV RNA定位于癌细胞的胞浆内,阳性细胞呈散在、灶状及弥漫分布三种形式;HBV X基因在肝癌细胞中的分布呈胞浆型、核型及核浆型,阳性细胞也呈上述三种分布形式;(2)HCV C33c抗原、核心抗原在肝细胞肝癌中的阳性率为81%(133/164)及86%(141/164).C33c抗原定位于癌细胞及肝细胞的胞浆内;核心抗原既定位于癌细胞核中,又可定位于胞浆中.C33c抗原阳性细胞以灶状分布为主;而核心抗原阳性细     

Selection with two alleles and complete dominance

For a plant selection model with frequency-independent viabilities, fertilities and selfing rates, it is shown that apart from global fixation, for certain parameter combinations a protected polymorphism and facultative fixation (either allele may become fixed according to initial frequencies) may both occur. Facultative fixation requires different selling rates for the dominant and recessive type. Protection of the polymorphism requires resource allocation for male and female function. In this connection the problem of purely genetically caused population extinction is discussed.
For general frequency dependence and regular segregation, the chances for establishment of a completely recessive gene are compared to those of a completely dominant gene. It is proven that the process of establishment of the recessive gene, despite a fitness advantage, may be considerably endangered by drift effects if random mating prevails. The recessive gene may reach the same effectivity in establishment as a dominant gene, only if the recessive homozygote mates exclusively with its own type during the period of establishment.