Linking above- and belowground responses to global change at community and ecosystem scales

Cryptic belowground organisms are difficult to observe and their responses to global changes are not well understood. Nevertheless, there is reason to believe that interactions among above- and belowground communities may mediate ecosystem responses to global change. We used grassland mesocosms to manipulate the abundance of one important group of soil organisms, arbuscular mycorrhizal (AM) fungi, and to study community and ecosystem responses to CO₂ and N enrichment. Responses of plants, AM fungi, phospholipid fatty acids and community-level physiological profiles were measured after two growing seasons. Ecosystem responses were examined by measuring net primary production (NPP), evapotranspiration, total soil organic matter (SOM), and extractable mineral N. Structural equation modeling was used to examine the causal relationships among treatments and response variables. We found that while CO₂ and N tended to directly impact ecosystem functions (evapotranspiration and NPP, respectively), AM fungi indirectly impacted ecosystem functions by influencing the community composition of plants and other root fungi, soil fungi and soil bacteria. We found that the mycotrophic status of the dominant plant species in the mesocosms determined whether the presence of AM fungi increased or decreased NPP. Mycotrophic grasses dominated the mesocosm communities during the first growing season, and the mycorrhizal treatments had the highest NPP. In contrast, nonmycotrophic forbs were dominant during the second growing season and the mycorrhizal treatments had the lowest NPP. The composition of the plant community strongly influenced soil N, and the community composition of soil organisms strongly influenced SOM accumulation in the mesocosms. These results show how linkages between above- and belowground communities can determine ecosystem responses to global change.     

Benthic community structure near the Woods Hole sewage outfall

Birge-Ekman box cores were used to sample the benthic invertebrate fauna near the Woods Hole, Massachusetts sewage outfall and a nearby control area. Community structure in terms of numbers and taxa fluctuated seasonally at both control site and at the outfall. The outfall fauna was dominated by small nematode worms, and the year-round maintenance of a nematode-dominated community may be a mechanism for utilization of the unpredictable, unnatural, excess organic material available around the outfall. Based on the small size of the invertebrates at the outfall compared to the other areas, it is suggested that the relationship between macrofaunal abundance and average individual size in an assemblage is a measurement of community structure which can be useful in assessing environmental disturbance.     

Warming alters community size structure and ecosystem functioning

Global warming can affect all levels of biological complexity, though we currently understand least about its potential impact on communities and ecosystems. At the ecosystem level, warming has the capacity to alter the structure of communities and the rates of key ecosystem processes they mediate. Here we assessed the effects of a 4°C rise in temperature on the size structure and taxonomic composition of benthic communities in aquatic mesocosms, and the rates of detrital decomposition they mediated. Warming had no effect on biodiversity, but altered community size structure in two ways. In spring, warmer systems exhibited steeper size spectra driven by declines in total community biomass and the proportion of large organisms. By contrast, in autumn, warmer systems had shallower size spectra driven by elevated total community biomass and a greater proportion of large organisms. Community-level shifts were mirrored by changes in decomposition rates. Temperature-corrected microbial and macrofaunal decomposition rates reflected the shifts in community structure and were strongly correlated with biomass across mesocosms. Our study demonstrates that the 4°C rise in temperature expected by the end of the century has the potential to alter the structure and functioning of aquatic ecosystems profoundly, as well as the intimate linkages between these levels of ecological organization.     

Microclimate,developmental plasticity and community structure in artificial temporary pools

Solar radiation, which influences temperature and hydroperiod, should strongly influence colonization, development rate, development strategies and survival in temporary pools. We assessed these hypotheses at two spatial microscales with varying microclimate. One scale, ca. 200 m, was opposing slopes of a canyon on MT Carmel, Israel, referred to as 'Evolution Canyon' (Nevo, 1995). Due primarily to differential solar radiation, the warmer and drier South-facing slope (SFS) supports a savanna-like open park forest while the cooler, moister North-facing slope (NFS) is heavily forested, primarily with live oak. Using artificial pools, we assessed how these close but contrasting environments may influence developmental plasticity in the frog, Hyla savignyi, and colonization of insects. As expected, hydroperiod was considerably longer on the NFS. Hyla tadpole development was significantly faster on the SFS, while size at metamorphosis was greater on the NFS. Insect species richness was higher in NFS pools. The most common species, Culex pipiens, oviposited significantly more in NFS pools than in SFS pools. In the second scale, we placed pools only meters apart, but varying in shade and thus maximum temperature at Haifa University Campus, MT Carmel. Species richness and maximum temperature among pools were not correlated during winter and early spring (cool to mild temperatures), but were strongly and negatively correlated during early summer (hot temperatures). Thermal tolerance in the laboratory of selected species matched their thermal spatial distribution in the field. These results indicate that temperature can play a strong role in affecting developmental strategies, species′ distributions and community structure in temporary pools over a very small spatial scale. This revised version was published online in July 2006 with corrections to the Cover Date.     

Climate change effects on above- and below-ground interactions in a dryland ecosystem

Individual species respond to climate change by altering their abundance, distribution and phenology. Less is known, however, about how climate change affects multitrophic interactions, and its consequences for food-web dynamics. Here, we investigate the effect of future changes in rainfall patterns on detritivore–plant–herbivore interactions in a semiarid region in southern Spain by experimentally manipulating rainfall intensity and frequency during late spring–early summer. Our results show that rain intensity changes the effect of below-ground detritivores on both plant traits and above-ground herbivore abundance. Enhanced rain altered the interaction between detritivores and plants affecting flower and fruit production, and also had a direct effect on fruit and seed set. Despite this finding, there was no net effect on plant reproductive output. This finding supports the idea that plants will be less affected by climatic changes than by other trophic levels. Enhanced rain also affected the interaction between detritivores and free-living herbivores. The effect, however, was apparent only for generalist and not for specialist herbivores, demonstrating a differential response to climate change within the same trophic level. The complex responses found in this study suggest that future climate change will affect trophic levels and their interactions differentially, making extrapolation from individual species'' responses and from one ecosystem to another very difficult.     

Invertebrate community structure and ecosystem functioning in European conifer plantation streams

1. Terrestrial leaf‐litter is the dominant energy input to many headwater streams and consequently the nature of the riparian vegetation can have profound effects on in‐stream processes. The impact of conifer plantations on community structure and ecosystem functioning (litter breakdown) was investigated in field experiments in three countries (Britain, Ireland, Poland), each representing a distinct European ecoregion. Twenty‐six streams were used in the trial: half were bordered with broadleaved and the other half with conifer riparian vegetation. 2. In a leaf breakdown study using litter bags, two leaf types (oak and alder) were used to assess the impact of resource quality and two mesh sizes (10 and 0.5 mm aperture) were used to gauge the relative importance of invertebrate detritivores and microbial decomposers respectively. Comparisons were made between vegetation types and among regions; pH varied among individual streams but, unlike many previous studies, it was not confounded with vegetation type, enabling us to isolate the effect of vegetation more effectively. 3. Overall, riparian vegetation type did not affect breakdown rates but strong regional differences were observed. There was also a significant interaction between these two variables, but this disappeared after fitting pH as a covariable, demonstrating its importance in determining breakdown rates and raising the possibility that in previous studies the impacts of conifer plantations might have been confounded with pH. 4. Shredder species composition differed between vegetation types. Small stoneflies were most strongly associated with conifer streams; broadleaved streams generally had a higher proportion of larger taxa, such as limnephilid caddisflies and gammarid shrimps, although the latter were excluded from sites with low pH. However, breakdown rates were maintained irrespective of shredder community composition, suggesting a high degree of functional redundancy in these communities. Similar processing rates were observed between streams with high numbers of nemourids and those with only a few limnephilids or gammarids, suggesting that density compensation among consumers might stabilise process rates. 5. Our results suggest that leaf‐litter breakdown can be an effective proxy for assessing stream ecosystem functioning, as rates differed significantly across spatial scales, from between streams to across regions and responded to an environmental gradient (pH). The litter bag technique can also complement traditional assessment methods by providing valuable information on the composition of consumer guilds, thereby providing an important link between structure and function that is needed to help inform management practices.     

Linking community size structure and ecosystem functioning using metabolic theory

Understanding how biogeochemical cycles relate to the structure of ecological communities is a central research question in ecology. Here we approach this problem by focusing on body size, which is an easily measured species trait that has a pervasive influence on multiple aspects of community structure and ecosystem functioning. We test the predictions of a model derived from metabolic theory using data on ecosystem metabolism and community size structure. These data were collected as part of an aquatic mesocosm experiment that was designed to simulate future environmental warming. Our analyses demonstrate significant linkages between community size structure and ecosystem functioning, and the effects of warming on these links. Specifically, we show that carbon fluxes were significantly influenced by seasonal variation in temperature, and yielded activation energies remarkably similar to those predicted based on the temperature dependencies of individual-level photosynthesis and respiration. We also show that community size structure significantly influenced fluxes of ecosystem respiration and gross primary production, particularly at the annual time-scale. Assessing size structure and the factors that control it, both empirically and theoretically, therefore promises to aid in understanding links between individual organisms and biogeochemical cycles, and in predicting the responses of key ecosystem functions to future environmental change.     

Microbial community structure and diversity in a native forest wood-decomposed hollow-stump ecosystem

The aim of this study is to investigate the microbial community structure and diversity in a wood-decomposed hollow-stump ecosystem. Microbial communities of SD-1, a lateritic soil sample from forest hollow-stump ecosystems in Fuzhou (a southeastern coast city of China), were characterized by constructing and analyzing rRNA gene clone libraries. Sixty-six phylotypes were identified from 112 bacterial clones, including Acidobacteria (71.5%), Proteobacteria (24.1%) and Verrucomicrobia (0.9%). A total of 40 phylotypes were obtained from 138 fungal clones, including Basidiomycota (42.8%), Ascomycota (36.2%), Zygomycota (13.8%), Chytridiomycota (2.9%) and Fungi incertae sedis (4.3%). The results showed a variety of clones related to the reported lignocellulose-decomposing microorganisms. They included some important bacterial decomposers, such as Sphingomonas and Burkholderia, and a number of wood-decaying fungi, including Tricholomataceae, Strophariaceae and Agaricaceae of Basidiomycota; Orbilia, Aspergillus, Phialocephala, Epicoccum and Phoma of Ascomycota and Mucorales of Zygomycota. The result indicated that the lignocellulolytic microorganisms worked synergically with a unique community structure to biodegrade lignocellulose in the hollow-stump ecosystem.     

Benthic macroinvertebrates in Swedish streams: community structure, taxon richness, and environmental relations

Spatial scale, e.g. from the stream channel, riparian zone, and catchment to the regional and global scale is currently an important topic in running water management and bioassessment. An increased knowledge of how the biota is affected by human alterations and management measures taken at different spatial scales is critical for improving the ecological quality of running waters. However, more knowledge is needed to better understand the relationship between environmental factors at different spatial scales, assemblage structure and taxon richness of running water organisms. In this study, benthic macroinvertebrate data from 628 randomly selected streams were analysed for geographical and environmental relationships. The dataset also included 100 environmental variables, from local measures such as in-stream substratum and vegetation type, catchment vegetation and land-use, and regional variables such as latitude and longitude. Cluster analysis of the macroinvertebrate data showed a continuous gradient in taxonomic composition among the cluster groups from north to south. Both locally measured variables (e.g. water chemistry, substratum composition) and regional factors (e.g. latitude, longitude, and an ecoregional delineation) were important for explaining the variation in assemblage structure and taxon richness for stream benthic macroinvertebrates. This result is of importance when planning conservation and management measurements, implementing large-scale biomonitoring programs, and predicting how human alterations (e.g. global warming) will affect running water ecosystems.     

Benthic diatom communities in boreal streams: community structure in relation to environmental and spatial gradients

An important goal for community ecology is the characterization and prediction of changes in community patterns along environmental gradients. We aimed to identify the major environmental correlates of diatom distribution patterns in boreal running waters. We classified 197 stream sites based on their diatom flora. Direct ordination methods were then used to identify the key environmental determinants of this diatom-based stream typology. Finally, we tested whether a regional classification scheme based on terrestrial landscapes (ecoregions) provides a reasonable framework for a regional grouping of streams based on their diatom flora. Two-way indicator species analysis produced 13 site groups, which were primarily separated by chemical variables, mainly conductivity, total P and water colour. In partial CCA, the environmental and spatial factors accounted for 38% and 24%, respectively, of explained variation in community composition. A high proportion (almost 40%) of variation explained by the combined effect (spatially-structured environmental) indicated that diatom communities of boreal streams incorporate a strong spatial component. At the level of subecoregions, classification strength was almost equally strong for all sites as for near-pristine reference sites only. Procrustes analysis indicated that spatial factors and patterns in diatom community structure were strongly concordant. Our data support the argument that diatom communities are strongly spatially structured, with distinctly different communities in different parts of the country. Because of the strong spatial patterns of community composition, bioassessment programs utilising lotic diatoms would clearly benefit from regional stratification. A combination of regional stratification and the prediction of assemblage structure from local environmental features might provide the most robust framework for diatom-based assessment of the biological integrity of boreal streams.     

Benthic community structures in the North Sea

Coherent assemblages of marine benthic species have been recognized from the early twentieth century, and the classical papers of Petersen (1914, 1918) were based on studies of limited areas in the North Sea. In 1986, a synoptic survey of the North Sea north to 57°N was undertaken by a group of ten laboratories from seven North Sea countries. The results of this survey have recently been published (Heip et al., 1992a, b; Künitzer et al., 1992; Huys et al., 1992), and some of the results are summarized in this paper. The analysis of the macrofauna is based on slightly more than 700 taxa. In general, the North Sea macrofauna consists of northern species extending south to the northern margins of the Dogger Bank, and southern species extending north to the 100 m depth line. The central North Sea is an area of overlap of southern and northern species, especially around the 70 m depth contour. Consistent groupings of species are recognized that were summarized in seven faunal groupings. Macrofaunal body weight, density and diversity increase linearly towards the north. Macrofaunal biomass for the whole area averages 7 g adwt. m⁻² and decreases from south to north. Distribution patterns and trends within the meiofauna were very different. Nematodes, which are the dominant taxon overall, are least abundant in the sandy sediments of the Southern Bight, then increase to a maximum around 53° 30′ N and slowly decrease again towards the north. Copepod density and diversity are highest in the Southern Bight, due to the presence of many interstitial species. A large number of species new to science were recorded by the North Sea Benthos Survey and about 1500 species are expected to occur. Copepods show very distinct assemblages according to water depth and sediment type. The contrasting patterns in latitudinal gradients of body weight and number of species of macro- and meiofauna can be only partially explained. Latitude and sediment characteristics, such as grain size and content in plant pigments, and water depth, determine part of the variance in species composition, density and biomass of the benthic fauna, but the patterns that are observed are different for different benthic groups, requiring careful consideration as to their use in biological monitoring procedures. Distributions are related to current patterns in the North Sea, annual temperature variations and availability of food. However, large parts of the variance in many parameters remain unexplained.     

Molecular tools for deciphering the microbial community structure and diversity in rumen ecosystem

Rumen microbial community comprising of bacteria, archaea, fungi, and protozoa is characterized not only by the high population density but also by the remarkable diversity and the most complex microecological interactions existing in the biological world. This unprecedented biodiversity is quite far from full elucidation as only about 15-20?% of the rumen microbes are identified and characterized till date using conventional culturing and microscopy. However, the last two decades have witnessed a paradigm shift from cumbersome and time-consuming classical methods to nucleic acid-based molecular approaches for deciphering the rumen microbial community. These techniques are rapid, reproducible and allow both the qualitative and quantitative assessment of microbial diversity. This review describes the different molecular methods and their applications in elucidating the rumen microbial community.     

Carbon isotopes in terrestrial ecosystem pools and CO2 fluxes

Stable carbon isotopes are used extensively to examine physiological, ecological, and biogeochemical processes related to ecosystem, regional, and global carbon cycles and provide information at a variety of temporal and spatial scales. Much is known about the processes that regulate the carbon isotopic composition (delta(13)C) of leaf, plant, and ecosystem carbon pools and of photosynthetic and respiratory carbon dioxide (CO(2)) fluxes. In this review, systematic patterns and mechanisms underlying variation in delta(13)C of plant and ecosystem carbon pools and fluxes are described. We examine the hypothesis that the delta(13)C of leaf biomass can be used as a reference point for other carbon pools and fluxes, which differ from the leaf in delta(13)C in a systematic fashion. Plant organs are typically enriched in (13)C relative to leaves, and most ecosystem pools and respiratory fluxes are enriched relative to sun leaves of dominant plants, with the notable exception of root respiration. Analysis of the chemical and isotopic composition of leaves and leaf respiration suggests that growth respiration has the potential to contribute substantially to the observed offset between the delta(13)C values of ecosystem respiration and the bulk leaf. We discuss the implications of systematic variations in delta(13)C of ecosystem pools and CO(2) fluxes for studies of carbon cycling within ecosystems, as well as for studies that use the delta(13)C of atmospheric CO(2) to diagnose changes in the terrestrial biosphere over annual to millennial time scales.     

Macrobenthic distribution and community structure in the upper navigation pools of the Upper Mississippi River

The northern section of the Upper Mississippi River supports a diverse macrobenthic assemblage. Distribution of this benthic fauna, benthic community structure, and factors which influences which influence both of these phenomena in these upper pools are reviewed. Dumping of heavy loads of municipal and industrial wastes from the Minneapolis-St. Paul metropolitan area has severely stressed the benthic community. Once abundant, pollution-sensitive mayflies, Hexagenia bilineata and H. limbata, are noticeably absent, replaced by pollution-tolerant oligochaetes and midges (notably Chironomus). Harmful effects of this pollution are not restricted to the area immediately downstream from the Twin Cities. In Lake Pepin, the Hexagenia population has suffered a drastic decline. The benthic community is characterized by low species diversity and a dominant, pollution-tolerant Chironomus plumosus — Oligochaeta — Sphaeriidae — Hirudinea community complex. Farther south, effects of the high organic load which originates approximately 226 km upstream are ameliorated. Inundation of large, diverse land areas contributes to the great ecological diversity in Pools No. 7 and No. 8. In Navigation Pool No. 7, benthic standing crops in the backwater pool areas (biomass range: 2.08–26.96 g m^–2) exceed those in the main channel (biomass range: 0.05–1.02 g m^–2). Greater numbers of burrowing mayflies and mollusks were found in the pool areas. Of 131 taxa collected from 1976–1977 in Lake Onalaska, which occupies most of Pool No. 7, eight dominant groups — Oligochaeta, Hirudinea, Isopoda, Amphipoda, Lepidoptera, Diptera, Gastropoda, and Pelecypoda — accounted for 90–93% of the macroinvertebrates. In Pool No. 8, over half of the 144 benthic taxa collected during the summer of 1975 were insect nymphs and larvae. Oligochaetes were by far the most ubiquitous and dominant macroinvertebrates. Habitat preferences of particular benthic forms reflected distributional relationships between macroinvertebrates and physical-chemical conditions. Benthic production, in terms of total wet weight m^–2 and macroinvertebrate density in each study area, was generally greater in the more eutrophic areas. However, fewer taxa were supported in these areas. These taxa were generally pollution-tolerant organisms, such as oligochaetes and certain chironomids, which were capable of burrowing into depositional-type substrates. More taxa and greater numbers of gill breathers and filter feeders, such as caddisflies, mayflies, stoneflies, and dipterans, were collected from less eutrophic areas.     

Effects on ecosystem resilience of biodiversity, extinctions, and the structure of regional species pools

Resilience is a general concept that aims to help understand how ecosystems respond to disturbances such as extinctions and invasions. Here, we propose a measure of one aspect of resilience, R _X , which is one minus the expected change in functional diversity (X) caused by a species extinction or addition. We show how two components of biodiversity, species richness and functional diversity, and the structure of regional species pools affect this measure. Variation in species richness and in functional diversity have opposite effects on R _X . Speciose assemblages generally have higher R _X than depauperate ones, whereas functionally diverse assemblages have low R _X relative to functionally depauperate ones. The effect of an extinction on R _X reflects this tradeoff. In our analyses, extinctions usually cause only a small decrease in both functional diversity and R _X . However, extinctions sometimes cause a large reduction in functional diversity and then tend to increase R _X . Regional assemblages containing all rather unique species tend to result in speciose assemblages with relatively low R _X and in low richness assemblages with relatively high R _X . The opposite is true of regional assemblages containing functionally similar species. Information about the processes that structure regional assemblages will therefore increase understanding of ecosystem resilience. Generally, these results suggest that management for biodiversity may not always result in management for resilience.     

Drought effects on above- and belowground production of a grazed temperate grassland ecosystem

The effect of climatic variation on terrestrial aboveground productivity (ANPP) has been well studied. However, little is known about how variable climate, including drought, may influence belowground productivity (BNPP), which constitutes most of the annual primary production of grasslands. The objectives of this study were to (1) examine how a 3-year period of declining moisture, which began as climatically wet to average across Yellowstone National Park (YNP) and ended in drought, affected ANPP and BNPP in grasslands of YNP and (2) how herds of grazing ungulates, which were shown previously to stimulate grassland shoot and root growth in YNP, may have interacted with climatic conditions to influence grassland production. ANPP and 0–20 cm BNPP, representing the bulk of the root dynamics, were measured in grazed and ungrazed (fenced) grassland at nine sites ranging widely in elevation, soil conditions and plant production during the 3-year study. Results revealed that 0–20 cm BNPP was strongly influenced by drought (P = 0.0005) and declined from 1999 to 2001 among ungrazed and grazed grasslands by 39 and 49%, respectively. The greater reduction in 0–20 cm BNPP among grazed grasslands was due, in part, to a decline (P = 0.07) in the stimulatory effect of grazing, i.e., the ratio g BNPP stimulated: g shoot consumed. In contrast, ANPP was unaffected by drought in either type of grassland. Thus, the effect of this drought in YNP was a large reduction in BNPP, which was a function of (1) a direct negative influence of increased moisture stress on root growth and (2) a weak interaction between drought and herbivory that led to a decline in the positive feedback from grazers to BNPP. These findings highlight the need to better understand factors that control root growth and to study the effects of climatic variation on grasslands within an ecosystem framework to include potentially important climate–consumer interactions.     

Inter-annual changes in the benthic community structure of riffles and pools in reaches of contrasting gradient

The inter-annual variation in the structure of the benthic community of riffles and pools was evaluated in contrasting geomorphic settings. The community structure of riffles and pools was a function of habitat, reach gradient, and discharge and was taxon specific. In years of below average peak discharge, riffles had higher taxon richness than pools (66 versus47) but richness was similar between habitats during a year of average discharge (56 versus 54). The percentage composition of oligochaetes and elmid beetles was more variable inter-annually in pools and low gradient reaches than in high gradient reaches. Differences in the percentage of collector-gatherers and scrapers in riffles and pools appeared related to inter-annual differences in discharge regimes. Two components of the annual discharge regime appear to differentially affect the composition of the benthic community in the snowmelt dominated stream studied: the magnitude of the annual peak discharge and the duration and timing of the period of extended high flow.     

Benthic invertebrate community structure is influenced by forest succession after clearcut logging in southeastern Alaska

To assess the effects of timber harvesting on headwater streams in upland forests, benthic community structure was contrasted among four dominant forest management types (old growth, red alder-dominated young growth, conifer-dominated young growth, clearcut) and instream habitats (woody debris, cobble, gravel) in southeastern Alaska. Benthos in streams of previously harvested areas resulted in increased richness, densities and biomass relative to old growth types, particularly in young growth stands with a red alder-dominated riparian canopy. Woody debris and gravel habitats supported a combination of higher densities and biomass of invertebrates than cobble habitats. In addition, woody debris also supported a richer and more diverse invertebrate fauna than either cobble or gravel substrates. Maintaining both a woody debris source and a red alder component in regenerating riparian forests following timber harvesting should support greater invertebrate densities and diversity following clearcutting.     

Global change tipping points: above- and below-ground biotic interactions in a low diversity ecosystem

Low diversity ecosystems are expected to be more vulnerable to global changes although they have received less attention than high diversity ecosystems. Addressing the present state of the Antarctic Dry Valley region by focusing on the potential global changes that may alter the coupling of above- and below-ground species and ecosystem processes is a realistic and critical need that has value beyond the Antarctic community. Presented here are suggested implications of global change on the Dry Valley terrestrial systems and how these effects might be manifested in the future.     

Preliminary assessment of arbuscular mycorrhizal fungal diversity and community structure in an urban ecosystem

Arbuscular mycorrhizal fungal (AMF) species richness, composition, spore density and diversity indices were evaluated in the Phoenix metropolitan area, Arizona, USA at 20 sampling sites selected to represent the four predominant land-use types found in the greater urban area: urban-residential, urban non-residential, agriculture and desert. AMF spores were extracted and identified from soil samples and from trap cultures established using soil collected at each site. Data were analyzed according to land use, land-use history, soil chemistry and vegetation characteristics at each site. Current agricultural sites were associated with decreased spore densities and historically agricultural sites with decreased species richness. Overall species composition was similar to that previously reported for the Sonoran desert, but composition at each sampling site was influenced by the vegetation from which samples were collected. Sites with the highest degrees of similarity in AMF species composition were also similar to each other in native plants or land use. Conversely, sites with the lowest similarity in AMF composition were those from which the majority of samples were collected from non-mycorrhizal plants, predominately ectomycorrhizal plants or bare soil. Spores of Glomus microggregatum were most abundant in urban sites, while those of G. eburneum were most abundant in desert and agricultural sites. Further studies are needed to determine the functional implications of shifts in AMF communities in urban ecosystems, including effects on plant primary productivity.