A revision of the moss genus Trachyphyllum Gepp (Thuidiaceae)

Trachyphyllum is transferred from the Entodontaceae to the Thuidiaceae on the basis of correlated gametophytic and sporophytic characters. The genus is considered to consist of two subgenera: subg.Trachyphyllum forT. inflexum (with numerous new synonyms),T. gastrodes, T. dusenii andT. borgenii; and subg.Carinatum, subg. nov., forT. carinatum,T. jeyporense andT. touwianum, n. sp. All the species are keyed, described and illustrated.     

Genetic structure of mosses Pleurozium schreberi (Willd. ex Brid.) Mitt. and Racomitrium lanuginosum (Hedw.) Brid. along altitude gradients in Hokkaido,Japan

Abstract

The families Pterigynandraceae and Rigodiaceae are reviewed for Africa with reference to the collections made by the BBS Expedition to Mt Mulanje, Malawi in 1991. The single African species of Rigodium (Rigodiaceae) is reported to be quite frequent on Mt Mulanje, and three of the four species of Trachyphyllum (Pterigynandraceae) found in Africa (T. gastrodes, T. dusenii and T. inflexum) are reported, the latter two for the first time from Malawi. On present limited evidence, Malawi seems to be a centre of diversity of the genus.     

On the Evolutionary and Biogeographic History of Saxifraga sect. Trachyphyllum (Gaud.) Koch (Saxifragaceae Juss.)

Arctic-alpine plants in the genus Saxifraga L. (Saxifragaceae Juss.) provide an excellent system for investigating the process of diversification in northern regions. Yet, sect. Trachyphyllum (Gaud.) Koch, which is comprised of about 8 to 26 species, has still not been explored by molecular systematists even though taxonomists concur that the section needs to be thoroughly re-examined. Our goals were to use chloroplast trnL-F and nuclear ITS DNA sequence data to circumscribe the section phylogenetically, test models of geographically-based population divergence, and assess the utility of morphological characters in estimating evolutionary relationships. To do so, we sequenced both genetic markers for 19 taxa within the section. The phylogenetic inferences of sect. Trachyphyllum using maximum likelihood and Bayesian analyses showed that the section is polyphyletic, with S. aspera L. and S bryoides L. falling outside the main clade. In addition, the analyses supported several taxonomic re-classifications to prior names. We used two approaches to test biogeographic hypotheses: i) a coalescent approach in Mesquite to test the fit of our reconstructed gene trees to geographically-based models of population divergence and ii) a maximum likelihood inference in Lagrange. These tests uncovered strong support for an origin of the clade in the Southern Rocky Mountains of North America followed by dispersal and divergence episodes across refugia. Finally we adopted a stochastic character mapping approach in SIMMAP to investigate the utility of morphological characters in estimating evolutionary relationships among taxa. We found that few morphological characters were phylogenetically informative and many were misleading. Our molecular analyses provide a foundation for the diversity and evolutionary relationships within sect. Trachyphyllum and hypotheses for better understanding the patterns and processes of divergence in this section, other saxifrages, and plants inhabiting the North Pacific Rim.     

桑黄孔菌属的研究进展

历来"桑黄"的种类混淆不清,直至近年来才被确定为桑树桑黄,与其亲缘性相近的物种也一同被划分入广义纤孔菌属的新分支—桑黄孔菌属。本文整理曾被当作"桑黄"的物种,阐述其正名和桑黄孔菌属确立的过程,对目前该属内物种的生物活性和栽培研究进展进行综述,旨在为桑黄孔菌属真菌资源的研究开发提供参考。     

Four trematode cercariae from the New Zealand intertidal snail Zeacumantus subcarinatus (Batillariidae)

Abstract

The cercariae and sporocysts (or rediae) of four trematode species are described from the intertidal snail Zeacumantus subcarinatus: a distome xiphidiocercaria assigned to the genus Renicola (family Renicolidae); a monostome xiphidiocercaria belonging either to the genus Microphallus or Megalophallus (family Microphallidae); a magnacercous cercaria of the genus Galactosomum (family Hetero‐phyidae); and a cercaria of the genus Philophthalmus (family Philophthalmidae). The morphological features of these cercariae are compared to previously described cercariae of the same genera. In addition, since the philophthalmid cercaria encysts readily on artificial substrates in the laboratory, the metacercaria of this species is also described. These cercariae are part of a diverse community of at least six digenean species parasitising the snail Z. subcarinatus that, together, have a major impact on the ecology and evolution of this snail.     

Echinoderm faunas from the Lower Cretaceous (Aptian–Albian) of Alexander Island,Antarctica

Abstract: Strata assigned to the Fossil Bluff Group on Alexander Island, Antarctica, contain Aptian to Albian high‐latitude echinoderm faunas that lived at palaeolatitudes greater than 60 degrees south. The Pluto Glacier Formation, of essentially Aptian age, yields a deep‐water assemblage that includes two ophiuroids, an ophiacanthid and a representative of the ophiolepidid genus Mesophiomusium, both represented by partially articulated specimens. The echinoid fauna includes a new genus of diadematoid, Australidiadema, and a new genus of disasteroid, Notidisaster, which extend the record of both groups into the southern hemisphere. The overlying Neptune Glacier Formation, of late Albian age, yields only spatangoids which are common but rarely well enough preserved to be identified even to genus level, although at least some belong to the genus Hemiaster.     

Patellaria: A new genus in the Chenopodiaceae

Comparative taxonomic studies within the genus Beta have shown that the section Patellares is distinct and should be regarded as a new genus, Patellaria, with the type Patellaria webbiana. The transference of Beta patellaris to this genus requires a new specific name, P. cordata.     

Abaristophora sachalinensis Michailovskaya (Diptera: Phoridae) representing genitalic affinities with the genus Borophaga Enderlein

Abaristophora sachalinensis Michailovskaya is reviewed based on Japanese materials. Its male genitalia are compared with those of the genus Borophaga, which is a genus in a group of the related genera, the Borophaga subgroup. A synapomorphic character of the Borophaga subgroup including Abaristophora, the left flattened arm derived from the posterodorsal margin of the hypandrium being broadened at the base, is confirmed in A. sachalinensis. Morphology of the aedeagus in A. sachalinensis is complex and extremely asymmetric, and very similar to that of species of the genus Borophaga, but the characters observed in this study are not regarded as synapomorphic for the Borophaga subgroup.     

Species discrimination through DNA barcoding in the genus Salacia of the Western Ghats in India

The genus Salacia (Celastraceae) is a source of many important pharmaceutical chemicals used in the Ayurvedic system of medicine in India. Owing to morphological similarities between species, the taxonomy of Salacia is complex and not fully settled. To ensure quality and assured therapeutic effects in the raw drugs from the genus, proper identification at the species level is critical. The main objective of this study was to find suitable DNA barcodes that can accurately and efficiently identify the potential medicinal species of the genus. Among the barcode loci analyzed, ITS2 exhibited the highest interspecific divergence, followed by trnH‐psbA, matK and rbcL. A clear barcoding gap was evident for the ITS2 barcode region whereas it was less conspicuous for trnH‐psbA and matK. The ITS2 barcode could discriminate all the eight analyzed Salacia species with 100% accuracy. We therefore propose barcoding with ITS2 to confirm the taxonomic identity of the raw drugs in the market. Further, the ITS2 region can be recommended for biosystematic studies in the genus.     

A record of the Plain Tiger,Danaus chrysippus,in Turkey

Summary

In this publication, a subdivision of the genus Annenica O. Boettger, 1877 sensu Auct. is proposed. One result of our study is the recognition of the genus Sprattia O. Boettger, 1883 for most of the South Anatolian species of the former genus Armenica. The genus Astrogena Szekeres, 1970, which was synonymised by H. NORDSIECK (1975: 98) with Armenica is redefined and used as a subgenus of Armenica for some species. Extensive recent collections contain new species and subspecies of this genus, which are described here.     

Acaulonopsis,a new moss genus of the Pottiaceae from Western Cape Province of South Africa,and comments on Vrolijkheidia

Abstract

A new genus, Acaulonopsis (Pottiaceae, Bryophyta), including two new species, A. fynbosensis and A. eureka, is described from the Western Cape Province of South Africa. Together with the similarly much reduced pottiaceous genus Acaulon, Acaulonopsis is unique in the family with a very short seta and spherical capsule, which lacks the apiculus found in other genera. The new genus is also distinguished by short plant stature, and a total of about five ovate leaves that clasp closely the capsules in nearly spherical leaf bases. Continuing bryological study of the fynbos region has recently resulted in a number of startling discoveries of bryophytes new to science and distinct at the genus level. A new combination is made for the South African endemic genus Vrolijkheidia (Pottiaceae) with discussion of its dimorphic habitus.     

Phylogeny of the avian genus Pitohui and the evolution of toxicity in birds

Bird species in the avian genus Pitohui contain potent neurotoxic alkaloids that may be used for defense. The genus comprises multiple species that are endemic to New Guinea and were presumed to belong to the family Pachycephalidae or Colluricinclidae, within the core corvoidea, an ancient Australasian radiation of crow-like birds. In order to understand the evolution of toxicity within the genus Pitohui, we sequenced three mitochondrial and two nuclear gene segments and reconstructed a phylogeny of the genus Pitohui and its putative relatives. We show that the genus Pitohui is polyphyletic, and consists of five different lineages. Using Bayesian ancestral state reconstruction, we estimate that toxicity likely evolved multiple times within this group. Furthermore, because the morphological and behavioral similarity among these poisonous birds appears to have evolved convergently, we hypothesize that this may be a possible example of Müllerian mimicry in birds. The Morningbird of Palau, Micronesia, that has often been included in the genus Pitohui, actually belongs in the genus Pachycephala and offers an intriguing case of pronounced evolution on a remote oceanic island.     

The Phylogeny of Acetic Acid Bacteria Based on the Partial Sequences of 16S Ribosomal RNA: The Elevation of the Subgenus Gluconoacetobacter to the Generic Level

Thirty-six strains of acetic acid bacteria classified in the genera Acetobacter, Gluconobacter, and Acidomonas were examined for their partial base sequences in positions 1220 through 1375, 156 bases, of 16S rRNA. The strains of the Q₁₀-equipped Gluconobacter species examined were divided into two subgroups, which included the type strains of Gluconobacter oxydans, the type species of the genus Gluconobacter, and of a second species, Gluconobacter cerinus, respectively. The base differences numbered four between the two type strains. The strains of the Q₉-equipped species examined classified in the type subgenus Acetobacter of the genus Acetobacter were not very distant phylogenetically from those of the genus Gluconobacter. The calculated number of base differences was 9–6 between the type strains of G. oxydans and G. cerinus and the type strains of Acetobacter aceti and Acetobacter pasteurianus. In contrast, the strains of the Q₁₀-equipped species examined classified in the subgenus Gluconoacetobacter of the genus Acetobacter were very distant phylogenetically from those of the Acetobacter and Gluconobacter species mentioned above. The number of base differences was calculated to be 14-8. Furthermore, the strains of the methanol-assimilating, Q₁₀-equipped species of the genus Acidomonas examined were located in phylogenetically isolated positions. The type strain of Acidomonas methanolica (≡ Acetobacter methanolicus), the type species of the genus Acidomonas, had 16–9 base differences. The data obtained here indicated that the members of the subgenus Gluconoacetobacter of the genus Acetobacter can be distinguished at the generic level. The new genus Gluconoacetobacter was proposed with the type species, Gluconoacetobacter liquefaciens, in recognition of the genus Acidomonas along with the genera Acetobacter and Gluconobacter in the classification of the acetic acid bacteria.     

Kulikovskiyia gen. nov. (Bacillariophyceae) from the lateritic rock pools of the Western Ghats,India and from Hainan Province,China

A new triundulate naviculoid diatom genus is described from the Western Ghats of Peninsular India and Hainan Province, China. The new taxon, Kulikovskiyia gen. nov. has robust conical spines along its margin and at the apices and the external valve face has longitudinally‐oriented siliceous slat system extending the length of the valve. The external distal raphe ends bifurcate and terminates on the valve face. There appear to be superficial similarities between this Asian genus and species and Playaensis, a genus comprised of two species found only in the western USA. The systematic position of Kulikovskiyia is discussed, and other than noting its similarities to other biraphid naviculoid diatoms due to symmetry features and the position of the raphe, we are uncertain about its systematic placement at finer levels of classification.     

Physiological and biochemical contributions to the taxonomy of the genus prototheca

Five physiological and biochemical characters, which had proved to be valuable for the taxonomy of the genus Chlorella, were studied in the genus Prototheca. There is no hydrogenase activity and no liquefaction of gelatin. Most strains are very acidtolerant (limit of growth at pH 2.0 or 2.5) and very salt-tolerant (limit of growth at 4 or 5% NaCl). Two strains grow well at 38°C. The 16 strains, which were previously assigned to seven taxa, fall into four different groups. Our results tend to support the assumption that Prototheca might be related to Chlorella protothecoides.     

Nervostroma, gen. nov. in the Sclerotiniaceae, the teleomorph of Cristulariella, and Hinomyces anam. gen. nov. to accommodate the anamorph of Grovesinia: reassessment of the genus Cristulariella

Taxonomy of the genus Cristulariella is revised, retaining Cristulariella (Crist.) depraedans as the type. Two new species, Crist. cercidiphylli and Crist. corni, are additionally described under the genus. The new anamorphic genus Hinomyces is erected to accommodate Botrytis (Cristulariella) moricola and Cristulariella pruni. A new genus and species, Nervostroma depraedans, is erected in the Sclerotiniaceae to accommodate the teleomorph of Crist. depraedans, with an additional species, Nervostroma cercidiphylli.     

Molecular phylogeny of the genus Helix (Pulmonata: Helicidae)

The vast diversity of land snail forms is insufficiently understood even in seemingly familiar taxa. This holds for Helix Linnaeus, 1758, a genus with several common edible species which comprises the largest Western Palearctic snails. The taxonomy of this genus, which has a centre of diversity in the eastern Mediterranean, has recently undergone significant changes, in both the delimitation of the genus itself and its species‐level systematics. Here, we compare the lineage diversity of Helix, as revealed by two mitochondrial markers, with the conclusions of the recently published morphology‐based taxonomic revision. For the molecular analysis, we assembled a representative data set covering almost all species of the genus as recognized by the mentioned revision. We obtained sequences not only from fresh and preserved soft tissues but also from dried tissue remains (some of them decades old) from shell collections. Our results show that the genus Helix, in the narrow sense proposed by recent studies, is paraphyletic because the genus Tacheopsis was unambiguously revealed as one of the tip branches of Helix. The monophyly of several species, as presently recognized, was not supported; partly, this may be attributed to a lineage diversity overlooked so far. This holds also for the type species of the genus, H. pomatia, which comprises at least one additional lineage. Greece, the Aegean and western Turkey is the core area for the diversity of Helix and its relatives, and the region is probably a major long‐term refuge for large Helicidae. The highest species diversity is found along the Alpide belt from the western Balkans to southern Turkey. The diversity of Helix in Europe, north of Greece and the Apennines, is a result of a single European radiation. Our data also suggest that past human activities likely influenced the present‐day distributions of some species.