Isoforms of Linamarase in Cassava (Manihot esculenta)

Linamarase (EC. 3.2.1.21) was purified from different tissues of cassava (leaf, rind and tuber) to compare the kinetic properties and characteristics of the enzyme in these tissues. Purified enzyme preparation appeared as single band of average molecular size 70 kD in SDS-PAGE gels. The kinetic properties of linamarase with respect to pH and temperature indicated that tuber linamarase possessed a broader pH optimum and higher temperature stability as compared to leaf and rind enzymes. Differences in Km values for linamarin were observed with leaf linamarase having the highest Km value (500 μM) followed by rind (400 μM) and then tuber (250 μM) linamarases. Rind enzyme appeared to be less susceptible to urea denaturation than the leaf enzyme. Comparison of elution profiles from DEAE-Cellulose indicated that the relative amounts of the various ionic forms of the enzyme differed in the case of each tissue. Elution patterns of the enzyme from Con A-Sepharose also differed, suggesting difference in glycosylation among leaf, rind and tuber enzymes. This was confirmed by carbohydrate analysis which showed that the tuber linamarase contained significantly higher amount of protein bound carbohydrate. These results suggest the possible occurrence of different forms of linamarase in cassava.     

Isozyme Diversity in Cassava Cultivars (Manihot esculenta Crantz)

Isoenzyme electrophoresis was used as a method to determine genetic diversity in various M. esculenta cultivars collected in the Southwestern (SW) and Northwestern (NW) regions of the State of Parana, in the South region of Brazil, and in cultivars produced at the Agronomic Institute of Campinas (IAC), S~ao Paulo State, Southeastern region of Brazil. The cultivars have been maintained by vegetative propagation for 5 years and are useful in production programs. A total of 28 loci in the acid phosphatase (ACP; EC 3.1.3.2), esterases (EST; EC 3.1.1.1), malate dehydrogenase (MDH; EC 1.1.1.37), and shikimate dehydrogenase (SKDH; EC 1.1.1.15) isozymes was analyzed. The proportion of polymorphic loci for NW, SW, and IAC cultivars was 57.14, 50.0, and 53.6%, respectively. Genetic diversity calculated by Nei's genetic identity (I) showed high I values for the three M. esculenta subpopulations. The high degree of polymorphism expressed by cassava cultivars is highly relevant to stimulate breeding programs with M. esculenta species.     

Environmental distribution of the trichloroethene reductive dehalogenase gene (tceA) suggests lateral gene transfer among Dehalococcoides

The trichloroethene reductive dehalogenase gene (tceA) of Dehalococcoides spp. was detected in 12 of 21 trichloroethene-to-ethene dechlorinating enrichment cultures established from aquifer and sediment samples collected from diverse geographic locations in the USA. Analysis of the tceA chromosomal regions indicated that the tceA genes shared greater than 95% sequence identity, and all shared identical tceAB spacer sequences and tceB genes downstream of tceA. A putative transposable element (PTE) was present 1077 bp downstream of the tceB stop codon in three of eight chromosomal regions analyzed. Sequence identity was interrupted downstream of tceB and upstream or downstream of the PTE, suggesting that intrachromosomal or interchromosomal transfer of tceAB had occurred.     

The Effects of Cyanide on the Rate of Oxygen-Consumption and P32 Uptake by Cyanogenic Tissues of the Cassava (Manihot esculenta) Tuber

The effects of cyanide on the rate of respiration (oxygen-consumption) and p32 up-take were studied in rind tissue discs from root tubers of the cyanogenic plant, Manihot esculenta (cassava). The following results were obtained. 1. Cyanide (M/1000, buffered at pH 7), instead of inhibiting the rate of respiration, evoked a marked stimulation (ca 168% of control rate) of the process. Within the range of concentration tested (10-5 to 10-2 M, pH 7) Qo2 increases with cyanide concentration in a manner indicative of rate/substrate relationship. This stimulation as well as the ground rate are abolished in dead (boiled) tissues. 2. Tissue extracts made with S6rensen phosphate buffer gave an easily measurable rate of oxygen-consumption which was stimulated by cyanide to the same extent (ca. 180% of control rate) as in tissue discs. The stimulated rate as well as the ground rate of oxygen-consumption are heat labile. It appears therefore, that at least the bulk of the cyanide stimulated oxygen-consumption is located in the extractable parts of the cassava tissue and is therefore extramitochondrial. Azide (M/1000, pH 7) also stimulates tissue respiration but to a slightly lower extent than cyanide. 3. Contrary to its stimulatory effect on the rate of respiration cyanide (M/1000, pH 7) inhibits p32 uptake by cassava rind tissue discs to 70% of the control rate. This inhibition is significantly weaker than that for the same process in wheat seedlings (ca. 10% of the control rate). On the other hand p32 uptake by cassava and wheat seedlings are strongly inhibited to about the same degree (29% and 18%) by DNP the un-coupling agent for phosphorylation. It was concluded from these results that the respiration-dependent process of p32 up-take in the tissues of a cyanogenic plant (cassava), like that in other commonly investigated plant tissues, is also mediated largely through the process of oxidative phosphorylation. The bulk of the cyanide-stimulated oxygen-consumption is extra-mitochondrial. The physiological significance of this enzyme mediated stimulatory effect by cyanide was considered in the light of a detoxication mechanism.     

木薯体细胞胚胎发生及植株再生研究

对木薯体细胞胚胎发生的影响因素进行了优化研究。结果表明,基因型对木薯体细胞胚胎发生影响很大,在供试的六个品种中,“华南 8 号”的体细胞胚胎发生率和产胚量最高,分别为 65% 和19个;侧芽茎尖为最佳外植体,体细胞胚胎发生的最佳培养基为MS +0.5mg/L CuSO4 + 4 mg/L 2,4-D。同时,对木薯体细胞胚再生成完整植株的主要影响因素作了分析,建立了一个高效的植株再生体系。     

Scopoletin Involvement in Post-Harvest Physiological Deterioration of Cassava Root (Manihot esculenta Crantz)

A study of the mechanism of the rapid deterioration of cassavaroots has shown that this requires the presence of oxygen andscopoletin, the latter acting, apparently, in some autocatalyticfashion. Roots from plants whose tops were pruned off some daysprior to harvest were less liable to spontaneous deterioration,but responded vigorously to the applied scopoletin, whereasroots stored for some time in the absence of O₂, so-called ‘cured’roots were no longer susceptible to exogenously-applied scopoletin.Clearly, metabolically, the two methods for prevention of deteriorationdiffer pruning may be effective due to internally-reduced scopoletinsupply or absence of some factor involved in the primary oxidation;‘curing’ may involve loss of a scopoletin precursoror inactivation of an enzyme system. Key words: Scopoletin, Manihot esculenta, Cassava, Post-harvest deterioration     

Microsatellites in Cassava (Manihot esculenta Crantz): discovery, inheritance and variability

 Fourteen microsatellites containing GA-repeats were isolated and characterized in cassava (Manihot esculenta Crantz, Euphorbiaceae). Microsatellite heterozygosity (h) was estimated in 48 accessions using (³²P)-end-labeled primers and in more than 500 accessions using fluorescence-based genotyping. Heterozygosity values ranged from 0.00 to 0.88 and the number of alleles detected varied from 1 to 15. The reproducibility of allele sizing was also assessed using fluorescence-based genotyping. The average inter-gel size difference was 1.03 nucleotides. Chi-square tests (χ²) were performed to analyse segregation distortion and the linkage between alleles segregating from either or both parents in an F₁ mapping population. Most microsatellite loci segregated in the expected 1 : 1, 1 : 2 : 1 or 1 : 1 : 1 : 1 ratio. Linkage was detected between loci segregating from either parent, and segregation distortion from the male parent was detected for locus GA-131. Approximately 80% of the microsatellites detected one or two alleles per accession, suggesting a low degree of microsatellite locus duplication, an unexpected finding for a putative allopolyploid, highly heterozygous species. The high h values of most microsatellites, their amplification in other Manihot taxa and their suitability for high-throughput, fluorescence-based genotyping, make microsatellites the marker of choice for germplasm characterization and saturation of the cassava map. Received: 4 September 1997 / Accepted 16 March 1998     

A Rapid and Inexpensive Enzymatic Assay for Total Cyanide in Cassava (Manihot esculenta Crantz) and Cassava Products

The well-known alkaline picrate test for cyanide has been improved by incorporating an enzymatic step to make the assay much more specific and quantitative. The sensitivity or detection limit of this method was found to be 0.16 μg/cm³ while the precision as indicated by the coefficient of variation was 3%. The method was, in addition, found to be rapid, simple, inexpensive and ideally suited for the analysis of large number of cassava tissues and products, such as may be encountered in cassava agronomy and breeding work or in industrial quality control laboratories. A trained operator working alone consistently analyzed at least 700 samples/day using this assay method.     

2018酶工程专刊序言

酶工程是酶学与工程科学融合的综合性科学技术,是现代生物技术的支柱之一。为促进国内酶工程研究的发展,本期"酶工程专刊"集中展现了我国酶工程专家学者在酶工程领域所取得的最新进展。     

Transfer and Expression of an Artificial Storage Protein (ASP1) Gene in Cassava (Manihot Esculenta Crantz)

In order to increase the nutritional quality of cassava storage roots, which contain up to 85% starch of their dry weight, but are deficient in protein, a synthetic ASP1 gene encoding a storage protein rich in essential amino acids (80%) was introduced into embryogenic suspensions of cassava via Agrobacterium-mediated gene transfer. Transgenic plants were regenerated from suspension lines derived from hygromycin-resistant friable embryogenic callus lines. Molecular analysis showed the stable integration of asp1 in cassava genome and its expression at RNA level in transformed suspension lines. PCR and Southern analyses proved the transgenic nature of the regenerated plant lines. The expression of asp1 at RNA level was demonstrated by RT-PCR. The ASP1 tetramer could be detected in leaves as well as in primary roots of cultured transgenic plants by western blots. These results indicate that the nutritional improvement of cassava storage roots may be achieved by constitutive expression of asp1 in transgenic plants.     

Microcalorimetric Investigation of DNA,poly(dA)poly(dT) and poly[d(A-C)]poly[d(G-T)] Melting in the Presence of Water Soluble (Meso tetra (4 N oxyethylpyridyl) Porphyrin) and its Zn Complex

Abstract

Thermodynamic parameters of melting process (δH_m, T_m, δT_m) of calf thymus DNA, poly(dA)poly(dT) and poly(d(A-C))·poly(d(G-T)) were determined in the presence of various concentrations of TOEPyP(4) and its Zn complex. The investigated porphyrins caused serious stabilization of calf thymus DNA and poly poly(dA)poly(dT), but not poly(d(A-C))poly(d(G-T)). It was shown that TOEpyp(4) revealed GC specificity, it increased T_m of satellite fraction by 24°C, but ZnTOEpyp(4), on the contrary, predominately bound with AT-rich sites and increased DNA main stage T_m by 18°C, and T_m of poly(dA)poly(dT) increased by 40 °C, in comparison with the same polymers without porphyrin. ZnTOEpyp(4) binds with DNA and poly(dA)poly(dT) in two modes—strong and weak ones. In the range of r from 0.005 to 0.08 both modes were fulfilled, and in the range of r from 0.165 to 0.25 only one mode—strong binding—took place. The weak binding is characterized with shifting of T_m by some grades, and for the strong binding T_m shifts by ～ 30–40°C. Invariability of ΔH_m of DNA and poly(dA)poly(dT), and sharp increase of T_m in the range of r from 0.08 to 0.25 for thymus DNA and 0.01–0.2 for poly(dA)poly(dT) we interpret as entropic character of these complexes melting. It was suggested that this entropic character of melting is connected with forcing out of H₂O molecules from AT sites by ZnTOEpyp(4) and with formation of outside stacking at the sites of binding. Four-fold decrease of calf thymus DNA melting range width ΔT_m caused by increase of added ZnTO- Epyp(4) concentration is explained by rapprochement of AT and GC pairs thermal stability, and it is in agreement with a well-known dependence, according to which ΔT～T_GC-T_AT for DNA obtained from higher organisms (L. V. Berestetskaya, M. D. Frank-Kamenetskii, and Yu. S. Lazurkin. Biopolymers 13, 193–205 (1974)). Poly (d(A-C))poly(d(G-T)) in the presence of ZnTOEpyp(4) gives only one mode of weak binding. The conclusion is that binding of ZnTOEpyp(4) with DNA depends on its nucleotide sequence.     

Quantitative Growth Relationships of Cassava (Manihot esculenta Crantz): Crop Development in a Savanna Wet Season

Growth characteristics of Manihot esculenta Crantz cv. Cubanawere determined for a crop, cultivated in savanna soil withfive different levels of fertilizer. A population of 25000 plantsha^–1 was studied using conventional growth analysis techniques. The storage root does not act as a sink for large amouns ofassimilates and differences in growth response were mainly aresult of the morphology development and function of leavesin the cassava canopy (source activity). Thus, during tuberization,the cultivar Cubana produces a progressively higher proportionof new leaves, maintaining throughout the season a relativelyhigh net assimilation rate and leaf area index. Manihot esculenta Crantz, Cassava, source-sink relationship, net assimilation rate, leaf area index, growth analysis     

影响木薯次生胚状体发生及植株再生因素的研究

研究了在外植体的不同发育阶段中,碳源以及不同的生长激素配比对木薯次生胚状体诱导及植株再生的影响。结果表明：以固体成熟培养基上生长１５ｄ的胚状体子叶为外植体,次生胚状体的产量最高,达２９．３个成熟胚状体／１个外植体。在次生胚状体的诱导阶段,以麦芽糖（４０ｇ／Ｌ）代替蔗糖作碳源,能同时提高次生胚状体的产量（３２．５个胚次体／１个外植体）及植株再生频率（７４．３％）。２,４－Ｄ与ＰＰ３３３;（０．１ｍｇ／Ｌ）配合能提高植株再生频率到７７．６％。２,４－Ｄ与ＢＡＰ（２ｍｇ／Ｌ）或激动素（２．０ｍｇ／Ｌ）配合则大大降低了胚状体诱导及植株再生频率。     

影响根癌农杆菌介导的木薯遗传转化因素分析

采用根癌农杆菌介导的叶盘转化法,以我国南方地区主栽木薯品种—华南8号的胚状体子叶为受体,对影响木薯遗传转化效率的主要因素进行了分析。研究结果表明,在木薯的遗传转化中,选用GV3101作为浸染外植体的农杆菌菌株,将感染时间和共培养时间分别控制在30~45 min和3~4 d、菌液浓度（OD₆₀₀）采用0.45、并添加200 μmol·L^-1的乙酰丁香酮（AS）均可明显提高其转化效率,但若对外植体进行预培养反而会降低其转化效率。利用该体系从453块外植体中共转化获得10株抗性再生植株,经PCR和Southern杂交检测,有8株木薯的基因组中已整合进了外源基因glgC336,转化率为1.77%。     

利用酵母双杂交筛选木薯果胶甲酯酶抑制因子MePMEI1的互作蛋白

果胶甲酯酶抑制因子(PMEI)在植物抗逆过程中具有重要作用.为了探究木薯MePMEI1的生物学功能及其在蛋白互作网络中的作用,本研究通过构建诱饵载体pGBKT7-MePMEI1,通过酵母双杂交方法从木薯cDNA文库中筛选MePMEI1的互作蛋白.结果表明,酵母双杂交共筛选出57个阳性克隆,阳性率约为32.6％,测序鉴定出37种含完整开放阅读框(ORF)的候选互作蛋白,包括非特异性丝氨酸/苏氨酸蛋白激酶/苏氨酸特异性蛋白激酶、叶绿素a/b结合蛋白、电压依赖性阴离子通道蛋白(VDAC2)、乙二醛酶Glyox-alase-2、氮素调节蛋白、木糖葡萄糖转移酶(TCH4)等,并通过回转验证检验其蛋白互作的真实性.验证结果表明MePMEI1与VDAC2、Glyoxalase-2蛋白具有相互作用.这进一步补充了其蛋白互作网络,为探究MeP-MEI1蛋白的互作网络提供新的依据.     

Cassava (Manihot esculenta Crantz), Cyanogenic Potential, and Predation in Northwestern Amazonia: The Tukanoan Perspective

The Tukanoans of northwestern Amazonia cultivate high-cyanogenic potential cassava, which provides 80% of their dietary energy. In an effort to understand why the Tukanoans cultivate primarily high-rather than low-cyanogenic potential cassava, which requires far less processing before consumption, this paper seeks to determine whether the Tukanoans discern a difference in levels of predation on high-and low-cyanogenic potential cassava. Given the potential protection afforded by high-cyanogenic potential, it was hypothesized that the Tukanoans would report higher predation upon low-cyanogenic potential cassava in comparison to high-cyanogenic potential cassava. Both unstructured interviews and pile-sort exercises were conducted to address this question. The unstructured interviews provide some support for the hypothesis, while the pile-sort interviews did not support the hypothesis. These data demonstrate that while the Tukanoans are cognizant of differences in predation on different cassava cultivars, resistance to predation may not be a characteristic of paramount concern in cultivar selection.     

Genetic diversity of traditional South American Landraces of Cassava (Manihot esculenta Crantz): an analysis using microsatellites

The extent and structure of the genetic variability of traditional varieties of cassava (Manihot esculenta Crantz) have been little documented, despite considerable evidence for this crop? great varietal diversity in traditional agroecosystems. We used microsatellite markers to assess the genetic structure of traditional landraces of sweet and bitter cassava collected from five South American sites. As reference, we used a sample of 38 accessions from a world collection of cultivated cassava. For a total of 10 loci examined, we found 15 alleles that were not represented in this sample. Ten of these had been previously detected in wild Manihot species. The geographical structure of genetic variability was weak, but the genetic differentiation between bitter and sweet landraces was significant, suggesting that each form had evolved separately after domestication. Our results showed that traditional landraces form an important source of genetic diversity and merit more attention from managers of crop genetic resources.     

Crystallization and preliminary crystallographic analysis of a 2,3-dihydroxybiphenyl dioxygenase from Pseudomonas sp. strain KKS102 having polychlorinated biphenyl (PCB)-degrading activity

Crystals have been obtained for a 2,3-dihydroxybiphenyl dioxygenase (conventionally called BphC) from a polychlorinated biphenyl (PCB)-degrader, Pseudomonas sp. strain KKS1O2. The crystals were grown using both ammonium sulfate and MPD as the precipitating agents. The crystals belonged to a tetragonal space group (I422) and diffracted to 2.5 Å. © 1995 Wiley-Liss, Inc.     

Chemical Composition of the Tuber Essential Oil from Helianthus tuberosus L. (Asteraceae)

Helianthus tuberosus L. (Jerusalem artichoke) is cultivated in Europe and other parts of the world as a food crop and ornamental plant. The volatile oils of the aerial parts of H. tuberosus were investigated more than 30 years ago, but no study could be found to date on the constituents of the tuber essential oil. Herein, the first characterization by GC‐FID, GC/MS, and ¹³C‐NMR analyses of a hydrodistilled essential oil of Jerusalem artichoke tubers was reported. Fresh plant material collected in Serbia (Sample A) and a commercial sample (Sample B) yielded only small amounts of oil (0.0014 and 0.0021% (w/w), resp.). In total, 195 constituents were identified, representing 88.2 and 93.6% of the oil compositions for Samples A and B, respectively. The main constituents identified were β‐bisabolene ( 1 ; 22.9–30.5%), undecanal (0–12.7%), α‐pinene (7.6–0.8%), kauran‐16‐ol ( 2 ; 6.9–9.8%), 2‐pentylfuran (0.0–5.7%), and (E)‐tetradec‐2‐enal (0.0–4.9%). Several rare compounds characteristic for Helianthus ssp. were also detected: helianthol A ( 6 ; 2.1–1.9%), dihydroeuparin ( 10 ; 0.0–2.3%), euparin ( 9 ; 0.0–0.4%), desmethoxyencecalin ( 7 ; traces – 0.2%), desmethylencecalin ( 8 ; 0.0–0.4%), and an isomer of desmethylencecalin (0.0%‐traces). The essential oils isolated from the tuber and the aerial parts share the common major component 1 .