中国野蚕一种强抗病毒蛋白的基因分析和活性鉴定

以最近报道的家蚕抗病毒蛋白基因为线索,从中国野蚕（Bombyx mandarina Moore）中肠内克隆了抗家蚕BmNPV病毒的SP-2 cDNA（GenBank登录号：AY945210）,基因大小855bp,编码284个氨基酸的蛋白质,分子量29．6kD,基因组全长1376bp,包含5个外显子和4个内含子．该基因的表达仅限于中肠,具有组织特异性,在幼虫龄中表达水平较高,而在眠期和熟蚕没有表达．推导其氨基酸序列,发现其C端氨基酸序列与已报道的家蚕相应序列差别较大,有8个氨基酸完全不同．通过体外重组技术,由高效基因表达系统获得大量重组蛋白,发现该蛋白具有很强的抗家蚕BmNPV活性,与家蚕对应的抗病毒蛋白BmSP-2相比,其抗BmNPV活性高1．6倍．初步认为,该蛋白质C端序列差异可能是造成家蚕与野蚕抗病毒活性差别的主要原因．     

家蚕BmST2基因的克隆与转录活性检测

通过生物信息学分析和生物学试验获得了家蚕糖转运蛋白基因BmST2(GenBank登录号:GQ871755),基因位于家蚕27号染色体,开放阅读框(ORF)长1398 bp,编码465个氨基酸,预测蛋白序列有典型的Sugar_tr结构域和11个疏水的跨膜结构域,与家蚕BmST1蛋白相似性和一致性分别达79%和64%,与登录号为EAT47626、EDS35465、EAA11457和EFA05337的同源蛋白相似性在50%以上。RT-PCR检测基因在5龄第3天家蚕幼虫的9种组织中转录活性,结果显示,BmST2基因除在脂肪体没有表达外,其他组织均有表达。最后成功构建了基因的酵母穿梭表达质粒pG-BKT7-BmST2。     

家蚕Wnt信号通路下游关键基因Pangolin转录剪接体X3的克隆和分析

【目的】克隆家蚕Bombyx mori Wnt信号通路下游关键基因Pangolin isoforms A/H/I/S转录剪接体X3 (Pangolin X3),分析其序列和表达特征。【方法】从NCBI数据库检索家蚕Pangolin X3,根据其编码序列(coding sequence, CDS)设计引物,利用PCR从家蚕幼虫中肠和血淋巴中进行克隆并测序验证。利用SilkDB 3.0, SMART,多序列比对和系统发育树分析Pangolin X3的序列特征。利用qRT-PCR分析Pangolin X3在家蚕5龄第3天幼虫不同组织(头、血淋巴、体壁、性腺、中肠、前部丝腺、中部丝腺、后部丝腺、脂肪体和马氏管)中的相对表达水平。【结果】从家蚕幼虫中肠和血淋巴克隆了Pangolin X3(GenBank登录号：XM＿038020921)的CDS,其开放阅读框长1 560 bp,编码519个氨基酸残基,预测分子量为55.86 kD,预测等电点为7.53。Pangolin X3蛋白含有保守的β-catenin结合位点和HMG结构域,其氨基酸序列在不同的昆虫中比较保守,特别是与DNA结合的HMG结构域...     

甜菜夜蛾过氧化氢酶cDNA序列克隆、 序列分析和表达特征

过氧化氢酶 (catalase, CAT)作为生物体内的重要物质, 其主要功能是参与活性氧代谢过程, 在清除H₂O₂、 超氧自由基和过氧化物以及阻止羟基自由基形成等方面发挥着重要作用。本研究利用RT-PCR技术和RACE方法首次克隆和分析了甜菜夜蛾Spodoptera exigua （Hübner）CAT基因, 命名为SexiCAT, GenBank登录号为JN051294, 其cNDA序列全长为1 755 bp, 开放阅读框长1 524 bp, 推测编码507个氨基酸。经氨基酸序列比对, 此多肽序列具有高度保守性, 与其他昆虫CAT的序列一致性分别为： 家蚕Bombyx mori （87%）、 黑腹果蝇Drosophila melanogaster （73%）、 埃及伊蚊Aedes aegypti （71%）和赤拟谷盗Tribolium castaneum （70%）。对该基因在甜菜夜蛾各个发育时期以及不同组织表达量的荧光定量PCR分析表明, SexiCAT基因在甜菜夜蛾各个发育阶段的表达水平存在显著差异, 其中成虫期的表达量最高, 是卵期表达量的7倍, 幼虫期次之, 卵期最低; SexiCAT基因在5龄幼虫体壁、 中肠、 脂肪体和马氏管组织中都有表达, 但在脂肪体中表达量最高。甜菜夜蛾SexiCAT基因的成功克隆及同源建模将为今后对其功能研究以及作为靶标设计新型氧化酶抑制剂提供了基础。     

家蚕丝氨酸蛋白酶抑制剂基因serpin-6的克隆、序列分析和组织表达

本文利用RT-PCR和RACE方法,获得了家蚕Bombyx mori丝氨酸蛋白酶抑制剂基因（serpin）的开放读码框(ORF) 和5′UTR序列。根据该基因与其他昆虫serpin的同源性关系将其命名为家蚕serpin-6 基因,GenBank登录号EU159447。为了研究serpin-6与家蚕免疫反应的相关机理,对serpin-6基因的组织表达和免疫刺激反应进行了研究。结果表明该基因在家蚕的头部和生殖腺中mRNA表达量非常高,在中肠,脂肪体,丝腺和血淋巴表达量较低。用脂多糖(LPS) 刺激5龄第3 d家蚕后,serpin-6基因在脂肪体和血淋巴中都被显著诱导表达,且都在刺激6 h后表达量最高。推测该基因在家蚕细胞免疫反应中起着一定的作用。     

德国小蠊两个海藻糖合成酶基因的克隆、组织分布及温度诱导表达分析

【目的】海藻糖合成酶（trehalose-6-phosphate synthase, TPS）是参与昆虫血糖-海藻糖合成的关键酶。本研究旨在克隆德国小蠊 Blattella germanica TPS基因,研究TPS基因在德国小蠊不同组织中的表达模式及在不同温度处理下的表达情况。【方法】通过RACE技术克隆德国小蠊TPS基因全长序列,利用荧光定量PCR的方法检测TPS基因在德国小蠊5龄幼虫不同组织中的表达模式及在高温(40℃和46℃处理30 min)及低温(0℃和10℃处理1 h)逆境下的表达量变化。【结果】从德国小蠊中克隆获得2个TPS基因,分别命名为 BgTPS1 (GenBank登录号：KR050213) 和 BgTPS2 (GenBank登录号：KR050214)。其中,BgTPS1基因cDNA序列全长2 987 bp,开放阅读框 (ORF) 2 502 bp,编码833个氨基酸;BgTPS2基因cDNA序列全长3 212 bp,开放阅读框2 469 bp,编码822个氨基酸。BgTPS1和BgTPS2基因都主要在5龄幼虫脂肪体中表达,且BgTPS2基因的表达量为BgTPS1基因表达量的3.9倍。在两种不同极端温度诱导下,BgTPS1和BgTPS2基因mRNA均上调表达。其中,BgTPS2 的表达量始终显著高于 BgTPS1。在0℃时,BgTPS1和BgTPS2的表达量最高。【结论】德国小蠊5龄幼虫中存在2个TPS基因。两个TPS基因均在脂肪体中高表达,且BgTPS2基因的表达量显著高于BgTPS1基因;低温和高温诱导下均能促进两个基因的表达量上升。该结果为进一步明确昆虫海藻糖的合成途径及其在昆虫对温度逆境的反应中的作用研究奠定了基础。     

西伯利亚蓼钙调蛋白基因的克隆及其在盐胁迫下的表达

已从西伯利亚蓼叶中cDNA文库中获得的钙调蛋白EST序列,采用cDNA末端快速扩增（RACE）技术克隆了具有完整编码区的钙调蛋白基因的cDNA序列（GenBank登录号GQ988382）,命名为PsCaM。该基因全长615bp,编码区为450bp,编码149个氨基酸,5＇非翻译区为63bp,3＇非翻译区为102bp。同源性分析表明,该蛋白与其他植物钙调蛋白高度保守,氨基酸同源性高达98%。用实时荧光定量PCR研究3%NaHCO3胁迫下西伯利亚蓼基因表达的结果显示,自然条件下,该基因在叶中表达量最高,地下茎次之,茎中最低;盐胁迫下CaM在西伯利亚蓼的地下茎、茎和叶中均有表达,表达模式不同。     

家蚕BmBrat基因的克隆与鉴定

NHL家族蛋白具有调控细胞增殖与分化的功能,在哺育动物中被广泛研究。本文克隆得到家蚕NHL蛋白家族成员BmBrat基因,通过RACE技术获得该基因cDNA全长序列为3 614 bp,其ORF为2 580 bp,编码859个氨基酸,预测其蛋白分子量为94.3 kDa,等电点为6.65。利用RT-PCR技术检测其在五龄3 d家蚕各组织表达情况,结果表明其在幼虫各组织均有表达,包括丝腺、中肠、脂肪体、马氏管等,且卵巢和头部表达量最高;胚胎时期表达谱分析显示其在胚胎发育第4天和第5天有高量表达。经原核表达、蛋白纯化及免疫小鼠后获得家蚕BmBrat多克隆抗体,且Western blotting及免疫荧光检测显示该抗体可以特异检测家蚕BmBrat蛋白;免疫荧光结果表明BmBrat蛋白定位于家蚕血细胞胞质中,为进一步研究BmBrat基因的生物学功能奠定了基础。     

家蚕MYST组蛋白乙酰转移酶基因Bm-mof的克隆表达和转录活性检测

MYST组蛋白乙酰转移酶(histone acetyltransferase, HAT)广泛存在于从酵母到人的真核生物中,在真核生物的转录调控中起着重要的作用。利用NCBI已登录的其他物种该基因的氨基酸序列与家蚕的基因组框架图和表达序列标签（expressed sequence tags, EST）数据库进行电子克隆,获得了家蚕中的同源基因。该基因长1 575 bp（GenBank登录号为DQ442997）,开放阅读框(ORF)长1 326 bp,无内含子。基因编码442个氨基酸,预测蛋白质的分子量为51.4 kD。序列中有HAT核心结构域、锌指结构域和染色质域3个保守的结构域,与其他物种同源基因具有较高的序列相似性。RT-PCR结果表明该基因在本实验所检测的家蚕各时期和组织中均有表达。将该基因用亚克隆的方法导入到pET50b载体中并成功地进行了原核表达,表达出了带有6个组氨酸和1个Nus·Tag标签的重组蛋白。     

烟夜蛾精氨酸激酶基因的克隆及mRNA表达分析

为了深入了解精氨酸激酶基因的作用和寻求害虫防治新的分子靶标, 本研究采用RT-PCR和RACE技术, 从烟夜蛾Helicoverpa assulta脂肪体中克隆了精氨酸激酶cDNA序列, 命名为HassAK（GenBank登录号: HQ336337）, 并采用荧光定量PCR测定了HassAK基因在不同发育阶段（4龄幼虫第1天到化蛹第1天）、 不同组织（头部、 中肠、 脂肪体、 体壁和腹足）和不同温度条件下的表达情况。测序和序列分析结果表明, HassAK基因阅读框架全长1 068 bp, 编码355个氨基酸残基, 预测蛋白质分子量和等电点分别为40.0 kD和5.76。氨基酸序列分析表明, 该序列具有精氨酸激酶典型的酶活性部位、 酶活性中心位点和能形成离子偶结构的保守区。序列比对结果表明, HassAK与其他昆虫AK的氨基酸序列具有70%以上的一致性。荧光定量分析结果显示, HassAK基因在幼虫头部、 中肠、 脂肪体、 体壁和腹足均可表达, 其中以腹足和中肠内的表达水平较高。时序表达分析表明, 预蛹期HassAK基因的表达量达到高峰。此外, 高温和低温均诱导HassAK基因的表达, 说明该基因可能参与昆虫抵御外界不良环境。     

Reversible inhibition of the hydrocortisone induction of glycerol phosphate dehydrogenase by cytochalasin B in rat glial C6 cells

The hydrocortisone (HC) induction of glycerol phosphate dehydrogenase (GPDH; EC 1.1.1.8) in rat glial C6 cells was inhibited reversibly and in a dose-dependent manner by cytochalasin B (CB). CB had no effect on basal level GPDH, total cellular RNA, DNA or protein content nor did it act as a general inhibitor of the rate of protein synthesis. CB did not appear to be acting via dissociation of microtubules since colcemid had no effect on the induction process. The addition of an alternate energy source (sodium pyruvate) did not relieve the CB inhibition of GPDH induction suggesting that CB is not exerting its effect by blocking glucose utilization. The inhibition by CB is not dependent on the temporal sequence of the induction process since it specifically inhibited GPDH induction at any time it was added. CB did not alter the rate of degradation of GPDH in these cells and direct measurements of the specific rate of synthesis of GPDH demonstrated that CB decreased the induced rate of GPDH synthesis by about 60%. The site of inhibition was more precisely defined by experiments which demonstrated a 60% decrease in specific nuclear binding of ³H-HC even though total cellular uptake of ³H-HC was unaffected. This effect on nuclear binding of HC is sufficient to account for the decreased accumulation of GPDH activity in CB-treated cells.     

Developmental regulation of glycerol-3-phosphate dehydrogenase synthesis inDrosophila

Methods have been developed to measure the synthesis of glycerol-3-phosphate dehydrogenase (GPDH) during the development of Drosophila melanogaster. In emerged adult flies, GPDH is a principal component of protein synthesis, comprising between 1 and 2% of the protein synthetic effort. This high relative rate of protein synthesis continues throughout adult life during a period of stable enzyme concentration. Therefore, it is evident that GPDH undergoes continual turnover. Analysis of GPDH synthesis in the adult segments reveals that this enzyme is synthesized in head, thorax, and abdomen. In 5-day-old flies, the relative rates of GPDH synthesis in the thorax and abdomen are similar. However, the concentration of GPDH in the thorax greatly exceeds that found in the abdomen. Therefore, it appears that the turnover rate of GPDH in the abdomen must be greater than the turnover rate of GPDH in the GPDH-containing cells (flight muscle) of the thorax. GPDH represents between 0.5 and 0.9% of the protein synthetic effort of larvae. The principle GPDH-containing tissue of larvae is fat body. The turnover of GPDH in larvae is similar to that in adult abdomen. This may be related to the concurrent presence of GPDH isozyme-3 in both tissues. Our studies indicate that the cell type-specific control of GPDH occurs at several levels.     

Seasonal freeze resistance of rainbow smelt (Osmerus mordax) is generated by differential expression of glycerol-3-phosphate dehydrogenase, phosphoenolpyruvate carboxykinase, and antifreeze protein genes

In winter, rainbow smelt (Osmerus mordax) accumulate glycerol and produce an antifreeze protein (AFP), which both contribute to freeze resistance. The role of differential gene expression in the seasonal pattern of these adaptations was investigated. First, cDNAs encoding smelt and Atlantic salmon (Salmo salar) phosphoenolpyruvate carboxykinase (PEPCK) and smelt glyceraldehyde-3-phosphate dehydrogenase (GAPDH) were cloned so that all sequences required for expression analysis would be available. Using quantitative PCR, expression of beta actin in rainbow smelt liver was compared with that of GAPDH in order to determine its validity as a reference gene. Then, levels of glycerol-3-phosphate dehydrogenase (GPDH), PEPCK, and AFP relative to beta actin were measured in smelt liver over a fall-winter-spring interval. Levels of GPDH mRNA increased in the fall just before plasma glycerol accumulation, implying a driving role in glycerol synthesis. GPDH mRNA levels then declined during winter, well in advance of serum glycerol, suggesting the possibility of GPDH enzyme or glycerol conservation in smelt during the winter months. PEPCK mRNA levels rose in parallel with serum glycerol in the fall, consistent with an increasing requirement for amino acids as metabolic precursors, remained elevated for much of the winter, and then declined in advance of the decline in plasma glycerol. AFP mRNA was elevated at the onset of fall sampling in October and remained elevated until April, implying separate regulation from GPDH and PEPCK. Thus, winter freezing point depression in smelt appears to result from a seasonal cycle of GPDH gene expression, with an ensuing increase in the expression of PEPCK, and a similar but independent cycle of AFP gene expression.     

Appearance of a second form of hepatic glycerol-3-phosphate dehydrogenase during neonatal development in the mouse

Livers of 4-day-old Balb/c mice contain a single form of glycerol-3-phosphate dehydrogenase (GPDH, sn-glycerol-3-phosphate:NAD 2-oxido-reductase, EC 1.1.1.8), which is designated GPDH I. The amount of hepatic GPDH I declines during maturation and levels off by about 6–7 weeks of age. During neonatal development a second form of the enzyme, GPDH II, appears. In mature Balb/c mice (6–7 weeks of age) GPDH II comprises about 30% of the total hepatic GPDH activity. Half-maximal levels of GPDH II are attained by about 18 days postpartum. The rate of appearance of GPDH II is not affected by premature weaning. Hepatic GPDH II is chromatographically distinct from hepatic GPDH I or the embryonic isozyme observed in neonatal brains. Thermal denaturation studies indicate that GPDH I and II from Balb/c mice are denatured at 50 °C with a half-time of about 2 min while the embryonic isozyme is denatured with a half-time of about 30 s. GPDH I and II isolated from C57BL6 mice are denatured at 50 °C with a half-time of 6 min while forms I and II from DDS mice are denatured with a half-time of about 12 min. Kinetic studies reveal that GPDH II and the embryonic isozyme have similar apparent affinities for NADH and dihydroxyacetone phosphate. The apparent affinity of GPDH I for NAD, NADH, dihydroxyacetone phosphate, and glycerol-3-phosphate is lower than that of GPDH II.     

Glycerol Phosphate Dehydrogenase Activity of Oligodendrocytes Isolated from Adult Pig Brain: Its Inducibility by Hydrocortisone

Developing oligodendrocytes cultured in vitro express glycerol phosphate dehydrogenase (GPDH; EC 1.1.1.8) and are known to respond to glucocorticoid treatment by increased activity of GPDH. We present evidence that GPDH is enriched in white matter and oligodendrocytes of adult pig brain. Bulk-isolated oligodendrocytes maintained in culture for several weeks exhibit an almost constant level of GPDH activity. Furthermore, a 4-day stimulation with hydrocortisone induces GPDH specific activity of long-term cultured oligodendrocytes from adult pig brain.     

Role of hexosamine biosynthesis in glucose-mediated up-regulation of lipogenic enzyme mRNA levels: effects of glucose,glutamine, and glucosamine on glycerophosphate dehydrogenase,fatty acid synthase,and acetyl-CoA carboxylase mRNA levels

Glucose uptake into adipose and liver cells is known to up-regulate mRNA levels for various lipogenic enzymes such as fatty acid synthase (FAS) and acetyl-CoA carboxylase (ACC). To determine whether the hexosamine biosynthesis pathway (HBP) mediates glucose regulation of mRNA expression, we treated primary cultured adipocytes for 18 h with insulin (25 ng/ml) and either glucose (20 mm) or glucosamine (2 mm). A ribonuclease protection assay was used to quantitate mRNA levels for FAS, ACC, and glycerol-3-P dehydrogenase (GPDH). Treatment with insulin and various concentrations of d-glucose increased mRNA levels for FAS (280%), ACC (93%), and GPDH (633%) in a dose-dependent manner (ED50 8-16 mm). Mannose similarly elevated mRNA levels, but galactose and fructose were only partially effective. l-glucose had no effect. Omission of glutamine from the culture medium markedly diminished the stimulatory effect of glucose on mRNA expression. Since glutamine is a crucial amide donor in hexosamine biosynthesis, we interpret these data to mean that glucose flux through the HBP is linked to regulation of lipogenesis through control of gene expression. Further evidence for hexosamine regulation was obtained using glucosamine, which is readily transported into adipocytes where it directly enters the HBP. Glucosamine was 15-30 times more potent than glucose in elevating FAS, ACC, and GPDH mRNA levels (ED50 approximately 0.5 mm). In summary: 1) GPDH, FAS, and ACC mRNA levels are upregulated by glucose; 2) glucose-induced up-regulation requires glutamine; and 3) mRNA levels for lipogenic enzymes are up-regulated by glucosamine. Hyperglycemia is the hallmark of diabetes mellitus and leads to insulin resistance, impaired glucose metabolism, and dyslipidemia. We postulate that disease pathophysiology may have a common underlying factor, excessive glucose flux through the HBP.     

Hormonal control of glycerolphosphate dehydrogenase in the rat brain

—Following hypophysectomy or adrenalectomy, glycerolphosphate dehydrogenase (GPDH) (EC 1.1.1.8) activity decreased exponentially in the cerebral hemispheres and brain stem of adult male rats. The latter region was more affected than the former. Malate dehydrogenase (EC 1.1.1.40), isocitrate dehydrogenase (EC 1.1.1.42), lactate dehydrogenase (EC 1.1.1.27) and mitochondrial glycerolphosphate dehydrogenase (EC 1.1.95.5) activities remained unchanged. Injection of adrenocorticotrophic hormone or cortisol in hypophysectomized rats or cortisol in adrenalectomized rats restored GPDH activity. Thyroidectomy and gonadectomy had no effect on GPDH activity. Liver GPDH was not decreased by hypophysectomy or adrenalectomy. Muscle GPDH was diminished slightly by adrenalectomy and as much as brain GPDH by hypophysectomy. In young rats GPDH developmental increase in activity was inhibited by hypophysectomy. These results clearly show that brain GPDH activity is specifically regulated by cortisol (and probably closely related corticosteroids).     

A histochemical and enzymatic study of the muscle fiber types in the water monitor, Varanus salvator

Histochemical analysis of five muscles from the water monitor, Varanus salvator, identified three major classes of fibers based on histochemical activities of the enzymes myosin ATPase (mATPase), succinic dehydrogenase (SDH), and alpha-glycerophosphate dehydrogenase (alpha GPDH). Fast-twitch, glycolytic (FG) fibers were the most abundant fiber type and exhibited the following reaction product intensities: mATPase, dark; SDH, light; alpha GPDH, moderate to dark. Fast-twitch, oxidative, glycolytic (FOG) fibers were characteristically mATPase, dark; SDH, light; alpha GPDH, moderate to dark. The third class of fibers had the following histochemical characteristics: mATPase, light; SDH, moderate to dark; alpha GPDH, light. These fibers were considered to be either slow twitch, or tonic, and oxidative (S/O). Pyruvate kinase (PK), alpha GPDH, and citrate synthase (CS) activities were measured in homogenates of the same muscles studied histochemically. There was a positive relationship between both PK and alpha GPDH activities and the percentage of glycolytic fiber types within a muscle. Likewise, CS activities were greater in muscles high in FOG and S/O content. Based on CS activities, Varanus S/O fibers were eight-fold more oxidative than FG fibers within the same muscle. PK/CS ratios suggested that FG fibers possess high anaerobic capacity, similar to the iguanid lizard Dipsosaurus. The fiber type composition of the gastrocnemius muscle, relative to that of other lizard species, suggests that varanid lizards may possess a greater proportion of FOG and S/O fibers than other lizards.