Leaf physiology of shade-grownCycas micronesica leaves following removal of shade

The photosynthetic characteristics ofCycas micronesica K.D. Hill were studied from August 1998 until February 1999 using chlorophyll fluorescence and gas-exchange techniques to determine the responses to long-term shade of 35% ambient light transmission, followed by the transfer of shade-grown leaves into full-sun conditions. The shade-grown leaves exhibited increased photosynthetic light use efficiency and effective quantum efficiency of photosystem II (PS II) and decreased photosynthetic light saturation point and dark respiration when compared with leaves grown in full sun. Shade was removed from shade-grownC. micronesica leaves during midday on December 14, 1998, when effective quantum efficiency of shaded leaves was 45% greater than that of sun leaves. Following one hour in full sun, effective quantum efficiency of the shade-grown leaves declined to below that of the sun-grown leaves. After receiving full sunlight for the rest of the photoperiod, maximum quantum efficiency of PS II photochemistry for shade-grown leaves was below that of sun-grown leaves throughout the night. The damage caused by excessive light to shade-grown leaves progressed for the first three days after shade removal. On day 3, effective quantum efficiency during midday was 30%, net photosynthesis was 47%, apparent quantum yield was 65%, and light compensation point was 136% of that for sun-grown leaves. After day 3, the relationship between full-sun leaves and the previously shaded leaves for these response variables was relatively stable. Two months following removal of shade, the previously shaded leaves continued to exhibit damage from high light. These results have application to transplanting cycad plants from a shaded nursery to a field site or, after tropical cyclones, where protective forest canopy cover has been destroyed and cycad plants in the forest subcanopy are abruptly exposed to full-sun conditions.     

Effects of scale insect herbivory and shading on net gas exchange and growth of a subtropical tree species (Guaiacum sanctum L.)

Summary The scale insect, Toumeyella sp., feeds exclusively on the subtropical hammock tree lignum vitae (Guaiacum sanctum L.). The combined effects of scale herbivory and shading on leaf gas exchange characteristics and growth of lignum vitae trees were studied using a factorial design. Trees grown in full sun or in 75% shade were manually infested with scale or left noninfested. Beginning 4 weeks after infestation, net CO₂ assimilation, stomatal conductance, transpiration, internal partial pressure of CO₂, and water-use efficiency were determined on single-leaves at 4-week intervals for trees in each treatment. At the end of the experiment, net CO₂ assimilation was determined for whole plants. Total leaf area, leaf, stem, and root dry weights, and leaf chlorophyll and nitrogen concentrations were also determined. Scale infested trees generally had lower net CO₂ assimilation, stomatal conductance, and transpiration rates as well as less leaf area, and root, stem, and leaf dry weights than noninfested trees. Twenty four weeks after the shade treatment was imposed, sun-grown trees had approximately twice the leaf area of shade-grown trees. Shade-grown trees compensated for the reduced leaf area by increasing their photosynthetic efficiency. This resulted in no difference in light saturated net CO₂ assimilation on a whole plant basis between sun-grown and shade-grown trees. Chlorophyll and nitrogen concentrations per unit leaf area were greater in leaves of shade-grown trees than in leaves of sun-grown trees. Shading and herbivory by Toumeyella sp. each resulted in decreased growth of Guaiacum sanctum. Scale insect herbivory did not result in greater detrimental effects on leaf gas exchange characteristics for shade-grown than for sun-grown trees. Herbivory by Toumeyella resulted in a greater decrease in tree growth for sun-grown than for shade-grown trees.     

Photosynthetic responses to light in seedlings of selected Amazonian and Australian rainforest tree species

Summary Seedlings of the Caesalpinoids Hymenaea courbaril, H. parvifolia and Copaifera venezuelana, emergent trees of Amazonian rainforest canopies, and of the Araucarian conifers Agathis microstachya and A. robusta, important elements in tropical Australian rainforests, were grown at 6% (shade) and 100% full sunlight (sun) in glasshouses. All species produced more leaves in full sunlight than in shade and leaves of sun plants contained more nitrogen and less chlorophyll per unit leaf area, and had a higher specific leaf weight than leaves of shade plants. The photosynthetic response curves as a function of photon flux density for leaves of shade-grown seedlings showed lower compensation points, higher quantum yields and lower respiration rates per unit leaf area than those of sun-grown seedlings. However, except for A. robusta, photosynthetic acclimation between sun and shade was not observed; the light saturated rates of assimilation were not significantly different. Intercellular CO₂ partial pressure was similar in leaves of sun and shade-grown plants, and assimilation was limited more by intrinsic mesophyll factors than by stomata. Comparison of assimilation as a function of intercellular CO₂ partial pressure in sun- and shade-grown Agathis spp. showed a higher initial slope in leaves of sun plants, which was correlated with higher leaf nitrogen content. Assimilation was reduced at high transpiration rates and substantial photoinhibition was observed when seedlings were transferred from shade to sun. However, after transfer, newly formed leaves in A. robusta showed the same light responses as leaves of sun-grown seedlings. These observations on the limited potential for acclimation to high light in leaves of seedlings of rainforest trees are discussed in relation to regeneration following formation of gaps in the canopy.     

Herbivory on Temperate Rainforest Seedlings in Sun and Shade: Resistance,Tolerance and Habitat Distribution

Differential herbivory and/or differential plant resistance or tolerance in sun and shade environments may influence plant distribution along the light gradient. Embothrium coccineum is one of the few light-demanding tree species in the temperate rainforest of southern South America, and seedlings are frequently attacked by insects and snails. Herbivory may contribute to the exclusion of E. coccineum from the shade if 1) herbivory pressure is greater in the shade, which in turn can result from shade plants being less resistant or from habitat preferences of herbivores, and/or 2) consequences of damage are more detrimental in the shade, i.e., shade plants are less tolerant. We tested this in a field study with naturally established seedlings in treefall gaps (sun) and forest understory (shade) in a temperate rainforest of southern Chile. Seedlings growing in the sun sustained nearly 40% more herbivore damage and displayed half of the specific leaf area than those growing in the shade. A palatability test showed that a generalist snail consumed ten times more leaf area when fed on shade leaves compared to sun leaves, i.e., plant resistance was greater in sun-grown seedlings. Herbivore abundance (total biomass) was two-fold greater in treefall gaps compared to the forest understory. Undamaged seedlings survived better and showed a slightly higher growth rate in the sun. Whereas simulated herbivory in the shade decreased seedling survival and growth by 34% and 19%, respectively, damaged and undamaged seedlings showed similar survival and growth in the sun. Leaf tissue lost to herbivores in the shade appears to be too expensive to replace under the limiting light conditions of forest understory. Following evaluations of herbivore abundance and plant resistance and tolerance in contrasting light environments, we have shown how herbivory on a light-demanding tree species may contribute to its exclusion from shade sites. Thus, in the shaded forest understory, where the seedlings of some tree species are close to their physiological tolerance limit, herbivory could play an important role in plant establishment.     

Effects of moderate high-temperature stress on photosynthesis in three saplings of the constructive tree species of subtropical forest

During the exposition to moderate high-temperature stress, photosynthetic rates and fluorescence of chlorophyll a were measured with a photosynthetic measurement system (Li-Cor 6400) and leaf chamber fluorometer (Li-Cor6400 LCF), respectively, in leaves of saplings, sun-adapted species (Schima superba), shade-adapted species (Cryptocarya concinna), and in mesophytic plant (Castanopsis hystrix) (42°C). The results showed that moderate high-temperature stress led to a decrease in F_v/F_>m, namely the primary photochemical quantum efficiency, indicating that moderate high-temperature stress causes a partial inhibition of PSII. It also showed that such an effect was more severe in the shade-adapted plant C. concinna than in the sun-adapted species S. superba. However, except for the sun-grown leaves of C. concinna, the moderate high-temperature stress increased the photosynthetic rate of leaves at high light intensity. Simultaneously, less photoinhibition was found to occur under high-light intensity, suggesting that the capacity of resistant-photoinhibition was stimulated by moderate high-temperature stress. The quantum yield of PSII (?_PSII) decreased in the sun-grown leaves of S. superba and C. hystrix but did not show any significant change in leaves of the shade plant C. concinna and shade-grown leaves of sun plant S. superba or the mesophytic plant C. hystrix because they already had a very low ?_PSII under this condition. Moderate high-temperature stress led to a decrease in ?_PSII/?_CO2 ratios, an estimate of the quantum requirement for CO2 assimilation, in the sun plant S. superba and the mesophytic plant C. hystrix because they were associated with the dissipation of a lower fraction of excitation energy. However, no significant changes were found in shade plant C. concinna and in shade-grown leaves of the other examined plants. The effect of moderate high-temperature (42°C) on photosynthesis depends on species and leaf type (sun and shade leaves) in the saplings of subtropical broad-leaved trees.     

Phototaxis, Host Cues, and Host-Plant Finding in a Monophagous Weevil, Rhinoncomimus latipes

Rhinoncomimus latipes is a monophagous weevil used as a biological control agent for Persicaria perfoliata in the eastern United States. Density of adult R. latipes and resulting feeding damage has been shown to be higher in the sun than in the shade. This study aimed to determine whether phototaxis, sensitivity to enhanced host cues from healthier sun-grown plants, or a combination is driving this behavior by the weevil. A series of greenhouse choice tests between various combinations of plant and light conditions showed that R. latipes is positively phototactic, responsive to host cues, and preferentially attracted to sun-grown plants over shade-grown plants. From our experiments, we hypothesize two phases of dispersal and host finding in R. latipes. The initial stage is controlled primarily by phototaxis, whereas the later stage is controlled jointly by host cues and light conditions.     

Soil Effects on Forest Structure and Diversity in a Moist and a Dry Tropical Forest

Soil characteristics are important drivers of variation in wet tropical forest structure and diversity, but few studies have evaluated these relationships in drier forest types. Using tree and soil data from 48 and 32 1 ha plots, respectively, in a Bolivian moist and dry forest, we asked how soil conditions affect forest structure and diversity within each of the two forest types. After correcting for spatial effects, soil‐vegetation relationships differed between the dry and the moist forest, being strongest in the dry forest. Furthermore, we hypothesized that soil nutrients would play a more important role in the moist forest than in the dry forest because vegetation in the moist forest is less constrained by water availability and thus can show its full potential response to soil fertility. However, contrary to our expectations, we found that soil fertility explained a larger number of forest variables in the dry forest (50 percent) than in the moist forest (17 percent). Shannon diversity declined with soil fertility at both sites, probably because the most dominant, shade‐tolerant species strongly increased in abundance as soil fertility increased.     

Recovery of Tawa-dominated forest fragments in the Rotorua Basin, New Zealand, after cessation of livestock grazing

Summary   Tawa ( Beilschmiedia tawa )-dominated forest fragments on farms within the Rotorua Basin were surveyed to quantify the likely recovery processes following exclusion of domestic livestock grazing, using a space-for-time substitution approach. Vegetation structure, plant diversity and soil fertility were measured at 24 sites within 15 forest fragments on six farms, covering a range in time since exclusion from grazing of 1–53 years. The forest fragments were compared with a large area of ungrazed forest in the nearby Lake Okataina Scenic Reserve. As time since exclusion from grazing increased, indigenous plant species diversity increased (up to 30–35 years); ground fern and epiphyte abundance increased (up to 30–35 years); tree seedling and sapling numbers, and litter cover also increased (up to 10–15 years); and overall tree numbers increased, while average tree diameter at breast height and overall tree basal area did not differ significantly. The soil fertility status was highly variable, obscuring clear patterns, although Olsen P status decreased with time since grazing exclusion. Once grazing of forest fragments ceases, significant changes in their diversity, structure and soil characteristics can be expected, which indicate recovery of these plant communities towards the conditions observed in ungrazed forest.     

Carbon stock assessment for a forest-to-coffee conversion landscape in Sumber-Jaya (Lampung, Indonesia): from allometric equations to land use change analysis

The change in stored carbon (C) stocks was assessed for a 700 km2 areawhere forest cover decreased from 60% to 10% in the last 30 years. At the same time, the area under coffee increased from 7% to 70% with a gradual evolution from open "sun coffee" systems to multi-strata "shade coffee" systems that providea partial compensation for C loss. The use of a generic tropical forest rather than tree-specific allometric equation can lead to substantial (up to 100%) overestimates of aboveground biomass depending on wood density and tree shape. The shoot:root ratio (biomass) of coffee shifted with age, from the 4:1 value often assumed for tropical trees to 2:1. Annual aboveground C stock accumulation rates during the establishment stage after slash-and- burn land clearing were 1, closeto 2 or 3.5 Mg C ha-1a-1 for sun coffee, shade coffee and fallow regrowth, respectively. Forest remnants, shade coffee and sun coffee had soil C stocks in the upper 30 cm of the soil that were 79%, 60% or 45%, respectively, of the values expected for primary forest in Sumatra. Total C stock (time averaged, above - 0.3m in the soil) for forest, shade and sun coffee was 262, 82 and 52 Mg C ha-1, respectively. In the 1970-1984 period, while forest cover was reduced from 59.5%to 19.7%, the landscape lost on average 6.8 Mg C ha-1 a-1. In the 1984-2000 period forest cover was further reduced to 12.6%, but the landscape lost only 0.39Mg C ha-1 a-1, as forest loss was partially compensated by an increase in shadecoffee systems. Conversion of all current sun coffee to shade coffee systems while protecting the remaining forest, could increase average landscape level C stocks by 10 Mg ha-1 over a time frame of say 20 years, or 0.5 Mg C ha-1 a-1.     

Limitation of nesting resources for ants in Colombian forests and coffee plantations

Abstract.  1. This study examines limitation of nesting resources for leaf-litter and twig-nesting ants as a mechanism of diversity loss across an intensification gradient of coffee production in Colombia. Twelve farms were selected and classified into four management types: forest, polygeneric shade coffee, monogeneric shade coffee, and sun coffee (unshaded coffee monocultures).
2. At each of the farms, four treatment subplots were established at the corners of each of 10 25 m² plots: (i) twig augmentation (adding 10 empty bamboo twigs); (ii) litter augmentation (tripling existing litter profile); (iii) twig and litter augmentation; and (iv) no manipulation control, for a total of 480 subplots. A twig addition experiment was also performed on coffee bushes.
3. The results showed significantly more ant colonies in the forest and monogeneric shade coffee litter augmentation plots after 4 months. Litter-nesting ant species richness was higher in all three shade systems than in the sun coffee. The identities of ants nesting on coffee bushes were different from those in the soil level litter. Fewer species nested in bamboo twigs placed in litter in the most intensive systems.
4. More ants nested in the resource addition treatments, and more ant species were found in forested habitats; however, a single mechanism cannot explain the observed patterns. It was concluded that a combination of bottom-up and top-down effects might lead to the loss of associated fauna with the intensification of these agroecosystems.     

Carbon stock assessment for a forest-to-coffee conversion landscape in Sumber-Jaya (Lampung, Indonesia): from allometric equations to land use change analysis

The change in stored carbon (C) stocks was assessed for a 700 km~2 area where forestcover decreased from 60% to 10% in the last 30 years. At the same time, the area under coffee increased from 7% to 70% with a gradual evolution from open "sun coffee" systems to multi-strata "shade coffee" systems that provide a partial compensation for C loss. The use of a generic tropi-cal forest rather than tree-specific allometric equation can lead to substantial (up to 100%) overes-timates of aboveground biomass depending on wood density and tree shape. The shoot: root ratio (biomass) of coffee shifted with age, from the 4∶1 value often assumed for tropical trees to 2∶1.Annual aboveground C stock accumulation rates during the establishment stage after slash-and-burn land clearing were 1, close to 2 or 3.5 Mg C ha~(-1)a~(-1) for sun coffee, shade coffee and fallowregrowth, respectively. Forest remnants, shade coffee and sun coffee had soil C stocks in the up-per 30 cm of the soil that were 79%, 60% or 45%, respectively, of the values expected for primary forest in Sumatra. Total C stock (time averaged, above-0.3 m in the soil) for forest, shade and sun coffee was 262, 82 and 52 Mg C ha~(-1), respectively. In the 1970-1984 period, while forest cover was reduced from 59.5% to 19.7%, the landscape lost on average 6.8 Mg C ha~(-1) a~(-1). In the1984-2000 period forest cover was further reduced to 12.6%, but the landscape lost only 0.39 MgC ha~(-1) a~(-1), as forest loss was partially compensated by an increase in shade coffee systems. Conversion of all current sun coffee to shade coffee systems while protecting the remaining forest,could increase average landscape level C stocks by 10 Mg ha~(-1) over a time frame of say 20 years,or 0.5 Mg C ha~(-1) a~(-1).     

Effects of moderate high-temperature stress on photosynthesis in three saplings of the constructive tree species of subtropical forest

During the exposition to moderate high-temperature stress, photosynthetic rates and fluorescence of chlorophyll a were measured with a photosynthetic measurement system (Li-Cor 6400) and leaf chamber fluorometer (Li-Cor6400 LCF), respectively, in leaves of saplings, sun-adapted species (Schima superba), shade-adapted species (Cryptocarya concinna), and in mesophytic plant (Castanopsis hystrix) (42°C). The results showed that moderate high-temperature stress led to a decrease in F_v/F_m, namely the primary photochemical quantum efficiency, indicating that moderate high-temperature stress causes a partial inhibition of PSII. It also showed that such an effect was more severe in the shade-adapted plant C. concinna than in the sun-adapted species S. superba. However, except for the sun-grown leaves of C. concinna, the moderate high-temperature stress increased the photosynthetic rate of leaves at high light intensity. Simultaneously, less photoinhibition was found to occur under high-light intensity, suggesting that the capacity of resistant-photoinhibition was stimulated by moderate high-temperature stress. The quantum yield of PSII (ϕ_PSII) decreased in the sun-grown leaves of S. superba and C. hystrix but did not show any significant change in leaves of the shade plant C. concinna and shade-grown leaves of sun plant S. superba or the mesophytic plant C. hystrix because they already had a very low ϕ_PSII under this condition. Moderate high-temperature stress led to a decrease in ϕ_PSII/ϕ_CO2 ratios, an estimate of the quantum requirement for CO₂ assimilation, in the sun plant S. superba and the mesophytic plant C. hystrix because they were associated with the dissipation of a lower fraction of excitation energy. However, no significant changes were found in shade plant C. concinna and in shade-grown leaves of the other examined plants. The effect of moderate high-temperature (42°C) on photosynthesis depends on species and leaf type (sun and shade leaves) in the saplings of subtropical broad-leaved trees.     

Species-Independent Down-Regulation of Leaf Photosynthesis and Respiration in Response to Shading: Evidence from Six Temperate Tree Species

The ability to down-regulate leaf maximum net photosynthetic capacity (Amax) and dark respiration rate (Rdark) in response to shading is thought to be an important adaptation of trees to the wide range of light environments that they are exposed to across space and time. A simple, general rule that accurately described this down-regulation would improve carbon cycle models and enhance our understanding of how forest successional diversity is maintained. In this paper, we investigated the light response of Amax and Rdark for saplings of six temperate forest tree species in New Jersey, USA, and formulated a simple model of down-regulation that could be incorporated into carbon cycle models. We found that full-sun values of Amax and Rdark differed significantly among species, but the rate of down-regulation (proportional decrease in Amax or Rdark relative to the full-sun value) in response to shade was not significantly species- or taxon-specific. Shade leaves of sun-grown plants appear to follow the same pattern of down-regulation in response to shade as leaves of shade-grown plants. Given the light level above a leaf and one species-specific number (either the full-sun Amax or full-sun Rdark), we provide a formula that can accurately predict the leaf''s Amax and Rdark. We further show that most of the down regulation of per unit area Rdark and Amax is caused by reductions in leaf mass per unit area (LMA): as light decreases, leaves get thinner, while per unit mass Amax and Rdark remain approximately constant.     

CASIROZ: Root parameters and types of ectomycorrhiza of young beech plants exposed to different ozone and light regimes

Tropospheric ozone (O(3)) triggers physiological changes in leaves that affect carbon source strength leading to decreased carbon allocation below-ground, thus affecting roots and root symbionts. The effects of O(3) depend on the maturity-related physiological state of the plant, therefore adult and young forest trees might react differently. To test the applicability of young beech plants for studying the effects of O(3) on forest trees and forest stands, beech seedlings were planted in containers and exposed for two years in the Kranzberg forest FACOS experiment (Free-Air Canopy O(3) Exposure System, http://www.casiroz.de ) to enhanced ozone concentration regime (ambient [control] and double ambient concentration, not exceeding 150 ppb) under different light conditions (sun and shade). After two growing seasons the biomass of the above- and below-ground parts, beech roots (using WinRhizo programme), anatomical and molecular (ITS-RFLP and sequencing) identification of ectomycorrhizal types and nutrient concentrations were assessed. The mycorrhization of beech seedlings was very low ( CA. 5 % in shade, 10 % in sun-grown plants), no trends were observed in mycorrhization (%) due to ozone treatment. The number of Cenococcum geophilum type of ectomycorrhiza, as an indicator of stress in the forest stands, was not significantly different under different ozone treatments. It was predominantly occurring in sun-exposed plants, while its majority share was replaced by Genea hispidula in shade-grown plants. Different light regimes significantly influenced all parameters except shoot/root ratio and number of ectomycorrhizal types. In the ozone fumigated plants the number of types, number of root tips per length of 1 to 2 mm root diameter, root length density per volume of soil and concentration of Mg were significantly lower than in control plants. Trends to a decrease were found in root, shoot, leaf, and total dry weights, total number of root tips, number of vital mycorrhizal root tips, fine root (mass) density, root tip density per surface, root area index, concentration of Zn, and Ca/Al ratio. Due to the general reduction in root growth indices and nutrient cycling in ozone-fumigated plants, alterations in soil carbon pools could be predicted.     

Net CO2 assimilation of taro and cocoyam as affected by shading and leaf age

Taro and cocoyam were grown outdoors in either full sun or under 40% shade. Leaves were tagged as they emerged and the effect of leaf age on net CO₂ assimilation rate (A) was determined. The effects of shading on A, transpiration (E), stomatal conductance for CO₂ (g_c) and H₂O (g_s), and water use efficiency (WUE) were also determined for leaves of a single age for each species. The effect of leaf age on A was similar for both species. Net CO₂ assimilation rates increased as leaf age increased up to 28 days with the exception of a sharp decline in A for 21 day-old leaves which corresponded to unusually low temperatures during the period of leaf expansion. A generally decreased as leaves aged beyond 28 days. Cocoyam had higher A rates than taro. Leaves of shade-grown plants had higher rates of A and E for both species at photosynthetic photon flux densities (PPFD) up to 1600 mol s^–1 m^–2. Shade-grown leaves of cocoyam had greater leaf dry weights per area (LW/A) and a trend toward higher g_c and g_s than sun-grown leaves. Shade leaves of taro had greater g_c and g₃ rates than sun-grown leaves. The data suggest that taro and cocoyam are highly adapted to moderate shade conditions.     

Biodiversity conservation in cocoa production landscapes: an overview

Cocoa agroforests that retain a floristically diverse and structurally complex shade canopy have the potential to harbour significant levels of biodiversity, yet few studies have documented the plant and animal species occurring within these systems or within landscapes dominated by cocoa production. In this special issue, we bring together nine studies from Latin America, Africa and Asia that document the contribution of cocoa agroforestry systems to biodiversity conservation, and explore how the design, management and location of these systems within the broader landscape influence their value as habitats, resources and biological corridors. Tree diversity within the cocoa production systems is variable, depending on management, cultural differences, location and farm history, among other factors. Animal diversity is typically highest in those cocoa agroforests that have high plant diversity, structurally complex canopies, and abundant surrounding forest cover. In general, both plant and animal diversity within cocoa agroforests is greater than those of other agricultural land uses, but lower than in the original forest habitat. There are several emerging threats to biodiversity conservation within cocoa production landscapes, including the loss of remaining forest cover, the simplification of cocoa shade canopies and the conversion of cocoa agroforestry systems to other agricultural land uses with lower biodiversity value. To counter these threats and conserve biodiversity over the long-term, land management should focus on conserving native forest habitat within cocoa production landscapes, maintaining or restoring floristically diverse and structurally complex shade canopies within cocoa agroforests, and retaining other types of on-farm tree cover to enhance landscape connectivity and habitat availability.     

鼎湖山植物物种多样性动态

鼎湖山自然保护区于1982年分别在针叶林、针阔叶混交林和常绿阔叶林内建立了3个永久样地。样地建立前,针叶林常受到人类的干扰,其它2种一直受到较好的保护。本文植物物种动态的研究和分析基于对3个样地在1982年和1994年的两次调查。结果表明,物种多样性的顺序是阔叶林＞混交林＞针叶林。就乔木（DBH>2.5cm）而言,3个样地的物种多样性和均匀度指数从1982年至1994年都已增长。除阔叶林外,两次调查的结果差别很大,这是因为在保护之下它们正产生进展演替。至于林下层植物则正好相反,除阔叶林外,针阔叶混交林和常绿阔叶林的多样性及均匀度指数均下降。物种的丰富度和个体数的变化同多样性指数变化一致。物种的组成变化符合演替规律,随着针叶林发展成为混交林,混交林发展成为阔叶林,其林冠变得较为密集,因而有更多的耐阴植物侵入,而一些喜光（不耐阴的）种消失。研究结果表明,人类的干扰将降低植物的物种多样性,而保护将使物种多样性得到恢复和提高。     

Woody plant diversity and structure of shade-grown-coffee plantations in northern Chiapas,Mexico

Shade-grown coffee is an agricultural system that contains some forest-like characteristics. However, structure and diversity are poorly known in shade coffee systems. In 61 coffee-growers' plots of Chiapas, Mexico, structural variables of shade vegetation and coffee yields were measured, recording species and their use. Coffee stands had five vegetation strata. Seventy seven woody species mostly used as wood were found (mean density 371.4 trees per hectare). Ninety percent were native species (40% of the local flora), the remaining were introduced species, mainly fruit trees/shrubs. Diametric distribution resembles that of a secondary forest. Principal Coordinates Analysis grouped plots in four classes by the presence of Inga, however the majority of plots are diverse. There was no difference in equitability among groups or coffee yields. Coffee yield was 835 g clean coffee per shrub, or ca. 1,668 kg ha-1. There is a significant role of shade-grown coffee as diversity refuge for woody plants and presumably associated fauna as well as an opportunity for shade-coffee growers to participate in the new biodiversity-friendly-coffee market.     

Bird diversity in cacao farms and forest fragments of western Panama

Theobroma cacao plantings, when managed under the shade of rainforest trees, provide habitat for many resident and migratory bird species. We compared the bird diversity and community structure in organic cacao farms and nearby forest fragments throughout mainland Bocas del Toro, Panama. We used this dataset to ask the following questions: (1) How do bird communities using cacao habitat compare to communities of nearby forest fragments? (2) To what extent do Northern migratory birds use shaded cacao farms, and do communities of resident birds shift their abundances in cacao farms seasonally? (3) Do small scale changes in shade management of cacao farms affect bird diversity? Using fixed radius point counts and additional observations, we recorded 234 landbird species, with 102 species that were observed in both cacao and forest fragments, 86 species that were only observed in cacao farms, and 46 species that were restricted to forest fragments. Cacao farms were rich in canopy and edge species such as tanagers, flycatchers and migratory warblers, but understory insectivores were nearly absent from cacao farms. We observed 27 migratory species, with 18 species in cacao farms only, two species in forest only, and seven species that occurred in both habitats. In cacao farms, the diversity of birds was significantly greater where there was less intensive management of the canopy shade trees. Shade tree species richness was most important for explaining variance in bird diversity. Our study shows that shaded cacao farms in western Panama provide habitat for a wide variety of resident and migratory bird species. Considering current land use trends in the region, we suggest that action must be taken to prevent conversion away from shaded cacao farms to land uses with lower biodiversity conservation value.     

Environmental gradients and community attributes underlying biodiversity patterns of semi-arid Mediterranean grasslands

Protection and/or establishment of forest plantation have been used as a management strategy to conserve and stop the deterioration of semi-arid Mediterranean grasslands ecosystems, producing a mosaic of vegetation types. This study was intended to investigate the changes in grassland community in response to protection and forest tree plantation practice as well as to explore the underlying environmental gradients responsible for the observed differences or similarities among these vegetation types. Two multivariate analysis methods including discriminate analysis and non-metric multi-dimensional scaling were used to quantify changes in community composition and attributes following different management practices (free grazing, protection with open grassland, sparse and dense forest tree plantations). This was investigated using species frequency, species abundance, or habitat characteristics. The study results showed that habitat types differed significantly between each other and were significantly separated using multivariate approaches. Discrimination based on habitat characteristics and species composition indicated that protection (or grazing) and light (or shade) explained more than 90% of the observed variability in community changes in response to the protection and forest tree plantation. Also, results indicated that shade effect can be attributed to tree canopy cover and/or litter accumulation on the ground. It could be hypothesized that protection from grazing and afforestation resulted in complex environmental gradients of which shade, litter accumulation as well as protection from grazing disturbance are major constituents. A careful manipulation of protection and afforestation can be used to create a spatially different environmental gradients leading to greater habitat diversity as well as a greater species diversity, and better conservation means of grassland in semi-arid areas.