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1.
Keith M. Bayha William M. Graham John E. Higgins III Heather A. Fletcher 《Hydrobiologia》2012,690(1):189-197
The jellyfish Drymonema larsoni bloomed in the northern Gulf of Mexico in the Fall of 2000 and fed voraciously on the moon jellyfish Aurelia sp., especially where they were concentrated in frontal convergence. We evaluated the predation potential of D. larsoni on Aurelia sp. medusa using laboratory and field data. Our data set represents the most complete study to date on the new scyphozoan family Drymonematidae and indicates that D. larsoni may be one of the most effective predators on other jellyfish recorded to date. On average, each D. larsoni medusa contained 2.7 Aurelia sp. prey, but as many as 34. In addition, 94% of moon jellyfish unassociated with D. larsoni showed scarring from previous contact with D. larsoni tentacles. Digestion times for D. larsoni feeding on individual Aurelia sp. ranged from 2 to 3 h and averaged 2.7 h. Potential clearance rates for predation on Aurelia sp. were extremely high (320–1043.5 m3 d−1) and indicate that D. larsoni is potentially an important predator on Aurelia sp. blooms where the species co-occur. When the two species co-occur in numbers, predation by D. larsoni medusae could reduce moon jellyfish blooms, possibly alleviating predation pressure on lower trophic levels utilized by Aurelia sp., such as copepods and the early life history stages of ecologically and economically important fish and invertebrate species. 相似文献
2.
3.
G. Alvarez Colombo A. Benović A. Malej D. Lučić T. Makovec V. Onofri M. Acha A. Madirolas H. Mianzan 《Hydrobiologia》2009,616(1):99-111
Acoustic techniques have been proposed as a new tool to assess jellyfish populations. However, the presence of mixed echoes
from jellyfish and other organisms that share their distribution often prevent accurate estimates of their abundance and distribution
being obtained. The isolated population of Aurelia inhabiting the Veliko Jezero (Big Lake-BL) of Mljet Island, in the South Adriatic Sea, offered a good opportunity to employ
acoustic techniques to assess an entire jellyfish population. During October 2–5, 2006, combined video and acoustic methods
were used in BL to determine the vertical distribution of medusae. Two synoptic acoustic surveys were performed during the
day and night. In the daylight echograms, medusae were clearly discernible from the acoustic data, and their presence verified
by video camera images, as forming a layer of varying density at and below the thermocline (15–30 m). The depth of the jellyfish
layer also coincided with the depth of maximum dissolved oxygen concentration. The echointegration of these daylight data
enabled quantification the Aurelia population, at a frequency of 120 kHz. In the night echograms, the acoustic signals of Aurelia were at least partially masked by pelagic and demersal fish, which disaggregated from schools and formed a layer associated
with a strong thermocline at 15 m. An average target strength (TS) of −76.4 dB was obtained in situ corresponding to a mean
length of 10.8 cm and a mean wet weight of 134 g measured from sampled medusae. These results were combined with echo-integration
values to provide an estimate of 4,238,602 individuals and a biomass of 568 tons of Aurelia in BL. This study provided a synoptic view of Mljet Lake and illustrated the potential of acoustic surveys of jellyfish populations
to contribute to ecosystems studies.
Guest editors: K. A. Pitt & J. E. Purcell
Jellyfish Blooms: Causes, Consequences, and Recent Advances 相似文献
4.
Mass occurrences of scypozoan medusae have become increasingly common in recent decades in European seas, including species in the genera Aurelia and Rhizostoma. We inferred the phylogeographic patterns of metagenetic scyphozoa Aurelia spp. and Rhizostoma pulmo from mitochondrial COI and nuclear ITS regions. No genetic structure was detected in R. pulmo over the Mediterranean Sea. By contrast, the phylogeographic analyses confirmed the separation of Aurelia spp. to several proposed cryptic species. Our results do not support the null hypothesis that both genera have concordant phylogeographic patterns. The resolvable parsimony network of haplotypes was retrieved for Aurelia aurita, Aurelia sp. 5, and Aurelia sp. 8 without connectivity between them and no genetic structure were found within those groups. Even though evidence of hybridization was found between A. aurita and Aurelia sp. 5, that did not break down the phylogenetic separation among them. The lowest haplotype and nucleotide diversity were found in samples of Aurelia sp. 8 and R. pulmo from the northern Adriatic, which acts as a sink area due to strong genetic drift. These new findings will facilitate linking the phenotype of the organism and its ability to survive in a particular environment—which shapes phylogeographic patterns. 相似文献
5.
Extension of methods for jellyfish and ctenophore trophic ecology to large-scale research 总被引:1,自引:0,他引:1
Jennifer E. Purcell 《Hydrobiologia》2009,616(1):23-50
Science has rapidly expanded its frontiers with new technologies in the 20th Century. Oceanography now is studied routinely
by satellite. Predictive models are on global scales. At the same time, blooms of jellyfish and ctenophores have become problematic,
especially after 1980. Although we have learned a great deal about gelatinous zooplankton ecology in the 20th Century on local
scales, we generally have not scaled-up to estimate the extent, the causes, or effects of large blooms. In this age of global
science, research on gelatinous zooplankton needs to utilize large-scale approaches and predictive equations. Some current
techniques enable jellyfish populations (aerial, towed cameras), feeding (metabolic rates, stable isotopes), and dynamics
(predictive modeling) to be studied over large spatial and temporal scales. I use examples of scyphomedusae (Aurelia spp., Cyanea capillata, Chrysaora
quinquecirrha) and Mnemiopsis leidyi ctenophores, for which considerable data exist, to explore expanding from local to global scales of jellyfish trophic ecology.
Regression analyses showed that feeding rates of Aurelia spp. (FR in copepods eaten medusa−1 d−1) generally could be estimated ±50% from in situ data on medusa wet weight (WW) and copepod density; temperature was not a
significant factor. FR of C. capillata and C.
quinquecirrha were similar to those of Aurelia spp.; the combined scyphomedusa regression underestimated measured FR of C.
quinquecirrha and Aurelia spp. by 50% and 180%, respectively, and overestimated measured FR of C. capillata by 25%. Clearance rates (CR in liters cleared of copepods ctenophore−1 d−1) of M. leidyi were reduced in small containers (≤20 l), and a ratio of container-volume to ctenophore-volume of at least 2,500:1 is recommended
for feeding experiments. Clearance rates were significantly related to ctenophore WW, but not to prey density or temperature,
and estimated rates within 10–159%. Respiration rates of medusae and ctenophores were similar across habitats with greatly
ambient different temperatures (10–30°C), and can be predicted from regressions using only mass. These regressions may permit
estimation of feeding effects of gelatinous predators without exhaustive collection of feeding data in situ. I recommend that
data on feeding and metabolism of jellyfish and ctenophores be entered in a database to allow generalized predictive relationships
to be developed to promote inclusion of these important predators in ecosystem studies and models.
Guest editors: K. A. Pitt & J. E. Purcell
Jellyfish Blooms: Causes, Consequences, and Recent Advances 相似文献
6.
Blooms of the moon jellyfish Aurelia spp. have occurred in the harbors and coastal waters around the world. The phylogenetic relationship and genetic characterization of Aurelia spp. was determined along the Chinese coastal waters based on sequences of the mitochondrial cytochrome c oxidase subunit I (COI) gene. The molecular analysis confirmed that all samples collected in Chinese coastal waters were Aurelia sp.1. We also analyzed the phylogenetic and population genetic structure of Aurelia sp.1 using the newly generated sequences supplemented with existing data from previous studies. The phylogenetic analyses of the COI regions did not support geographically restricted groups among the global samples of Aurelia sp.1. Analysis of molecular variance (AMOVA) indicated a complex genetic population structure and pattern of connectivity. Populations of Aurelia sp.1 were highly structured between most sampling sites over distances as small as 100 km (Rizhao and Qingdao) in certain cases. However, non-significant pairwise FST values were also observed between short geographic distances (Yantai, Rongcheng and Qingdao) and relatively distant sampling sites (Caofeidian, Rizhao and Japan). The life-cycle characteristics, together with the prevailing ocean currents in this region and possible anthropogenic introduction, were proposed and discussed as the main factors that determined the genetic patterns of Aurelia sp.1. 相似文献
7.
Aims
To test the hypothesis that Mycobacterium bovis can persist in the environment within protozoa.Methods and Results
In this study, we used a novel approach to detect internalized mycobacteria in environmental protozoa from badger latrines. Acid‐fast micro‐organisms were visualized in isolated amoebae, although we were unable to identify them to species level as no mycobacteria were grown from these samples nor was M. bovis detected by IS6110 PCR. Co‐incubation of Acanthamoeba castellanii with virulent M. bovis substantially reduced levels of bacilli, indicating that the amoebae have a negative effect on the persistence of M. bovis.Conclusions
The internalization of mycobacteria in protozoa might be a rare event under environmental conditions. The results suggest that amoebae might contribute to the inactivation of M. bovis rather than representing a potential environmental reservoir.Significance and Impact of the Study
Protozoa have been suggested to act as an environmental reservoir for M. bovis. The current study suggests that environmental amoebae play at most a minor role as potential reservoirs of M. bovis and that protozoa might inhibit persistence of M. bovis in the environment. 相似文献8.
X.Q. Mao Z. Zhang H. Jiang R.Y. Chai H.P. Qiu J.Y. Wang X.F. Du B. Li G.C. Sun 《Journal of applied microbiology》2013,114(5):1480-1490
Aim
To examine the inhibition effects of rhizosphere fungal strain MF‐91 on the rice blast pathogen Magnaporthe grisea and sheath blight pathogen Rhizoctonia solani.Methods and Results
Rhizosphere fungal strain MF‐91 and its metabolites suppressed the in vitro mycelial growth of R. solani. The inhibitory effect of the metabolites was affected by incubation temperature, lighting time, initial pH and incubation time of rhizosphere fungal strain MF‐91. The in vitro mycelial growth of M. grisea was insignificantly inhibited by rhizosphere fungal strain MF‐91 and its metabolites. The metabolites of rhizosphere fungal strain MF‐91 significantly inhibited the conidial germination and appressorium formation of M. grisea. Moreover, the metabolites reduced the disease index of rice sheath blight by 35·02% in a greenhouse and 57·81% in a field as well as reduced the disease index of rice blast by 66·07% in a field. Rhizosphere fungal strain MF‐91 was identified as Chaetomium aureum based on the morphological observation, the analysis of 18S ribosomal DNA internal transcribed spacer sequence and its physiological characteristics, such as the optimal medium, temperature and initial pH for mycelial growth and sporulation production.Conclusions
Rhizosphere fungus C. aureum is effective in the biocontrolling of rice blast pathogen M. grisea and sheath blight pathogen R. solani both in in vitro and in vivo conditions.Significance and Impact of the Study
This study is the first to show that rhizosphere fungus C. aureum is a potential fungicide against rice blast and sheath blight pathogens. 相似文献9.
Brittany E. Harlow Michael D. Flythe Glen E. Aiken 《Journal of applied microbiology》2018,124(1):58-66
Aims
The objective was to determine the effect of the isoflavone biochanin A (BCA) on rumen cellulolytic bacteria and consequent fermentative activity.Methods and Results
When bovine microbial rumen cell suspensions (n = 3) were incubated (24 h, 39°C) with ground hay, cellulolytic bacteria proliferated, short‐chain fatty acids were produced and pH declined. BCA (30 μg ml?1) had no effect on the number of cellulolytic bacteria or pH, but increased acetate, propionate and total SCFA production. Addition of BCA improved total digestibility when cell suspensions (n = 3) were incubated (48 h, 39°C) with ground hay, Avicel, or filter paper. Fibrobacter succinogenes S85, Ruminococcus flavefaciens 8 and Ruminococcus albus 8 were directly inhibited by BCA. Synergistic antimicrobial activity was observed with BCA and heat killed cultures of cellulolytic bacteria, but the effects were species dependent.Conclusions
These results indicate that BCA improves fibre degradation by influencing cellulolytic bacteria competition and guild composition.Significance and Impact of the Study
BCA could serve as a feed additive to improve cellulosis when cattle are consuming high‐fibre diets. Future research is needed to evaluate the effect of BCA on fibre degradation and utilization in vivo. 相似文献10.
Past vegetation dynamics in the Yellowstone region highlight the vulnerability of mountain systems to climate change
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Virginia Iglesias Cathy Whitlock Teresa R. Krause Richard G. Baker 《Journal of Biogeography》2018,45(8):1768-1780
Aim
Reconstruct the long‐term ecosystem dynamics of the region across an elevational gradient as they relate to climate and local controls. In particular, we (1) describe the dominant conifers' history; (2) assess changes in vegetation composition and distribution; and (3) note periods of abrupt change versus stability as means of better understanding vegetation responses to environmental variability.Location
Greater Yellowstone Ecosystem (GYE; USA).Time period
16.5 ka bp ‐present.Major taxa studied
Juniperus, Picea, Abies, Pinus, Pseudotsuga.Methods
The vegetation reconstruction was developed from 15 pollen records. Results were interpreted based on modern pollen–vegetation relationships estimated from a suite of regression‐based approaches.Results
Calibrated pollen data suggest that late‐glacial vegetation, dominated by shrubs and Juniperus, lacks a modern counterpart in the area. Picea, Abies and Pinus expanded at 16 ka bp in association with postglacial warming and co‐occurred in mixed‐conifer parkland/forest after 12 ka bp . This association along with Pinus contorta forest, which was present after 9 ka bp , has persisted with little change at middle and high elevations to the present day. This stability contrasts with the dynamic history of plant communities at low elevations, where shifts between parkland, steppe and forest over the last 8,000 years were likely driven by variations in effective moisture and fire.Main conclusions
The postglacial vegetation history of the GYE highlights the dynamic nature of mountain ecosystems and informs on their vulnerability to future climate change: (1) most of the conifers have been present in the area for >12,000 years and survived climate change by adjusting their elevational ranges; (2) some plant associations have exhibited stability over millennia as a result of nonclimatic controls; and (3) present‐day forest cover is elevationally more compressed than at any time in history, probably due to the legacy of the Medieval Climate Anomaly and the Little Ice Age. 相似文献11.
Evaluation of DNA extraction methods for Bacillus anthracis spores isolated from spiked food samples
M.C. Thomas M.J. Shields K.R. Hahn T.W. Janzen N. Goji K.K. Amoako 《Journal of applied microbiology》2013,115(1):156-162
Aims
Nine commercial DNA extraction kits were evaluated for the isolation of DNA from 10‐fold serial dilutions of Bacillus anthracis spores using quantitative real‐time PCR (qPCR). The three kits determined by qPCR to yield the most sensitive and consistent detection (Epicenter MasterPure Gram Positive; MoBio PowerFood; ABI PrepSeq) were subsequently tested for their ability to isolate DNA from trace amounts of B. anthracis spores (approx. 6·5 × 101 and 1·3 × 102 CFU in 25 ml or 50 g of food sample) spiked into complex food samples including apple juice, ham, whole milk and bagged salad and recovered with immunomagnetic separation (IMS).Methods and Results
The MasterPure kit effectively and consistently isolated DNA from low amounts of B. anthracis spores captured from food samples. Detection was achieved from apple juice, ham, whole milk and bagged salad from as few as 65 ± 14, 68 ± 8, 66 ± 4 and 52 ± 16 CFU, respectively, and IMS samples were demonstrated to be free of PCR inhibitors.Conclusions
Detection of B. anthracis spores isolated from food by IMS differs substantially between commercial DNA extraction kits; however, sensitive results can be obtained with the MasterPure Gram Positive kit.Significance and Impact of the Study
The extraction protocol identified herein combined with IMS is novel for B. anthracis and allows detection of low levels of B. anthracis spores from contaminated food samples. 相似文献12.
J.‐Y. Kim B.‐K. Park H.‐J. Park Y.‐H. Park B.‐O. Kim S. Pyo 《Journal of applied microbiology》2013,115(2):517-526
Aims
Atopic dermatitis (AD) is an inflammatory skin disease. Probiotics have been reported to modulate immune responses and thus are now being suggested as potential treatments for allergies. In this study, we investigated the inhibitory effects of Lactobacillus sakei probio 65 isolated from Kimchi on artificially inducing AD in NC/Nga mice.Methods and Results
Oral administration of viable or heat‐inactivated Lact. sakei probio 65 improved the condition of skin and reduced scratching frequency. Serum levels of IgE and cutaneous T‐cell‐attracting chemokine (CTACK) were significantly decreased by this therapy. Dead Lact. sakei probio 65 also decreased IL‐4 and IL‐6 serum concentrations. Moreover, both live and dead Lact. sakei probio 65 inhibited the expression of Thymus and activation‐regulated chemokine and CTACK in AD‐like skin lesions. The increased levels of Foxp3 expression in the lesional skin and ears were also suppressed by Lact. sakei probio 65. In addition, Lact. sakei probio 65 inhibited β‐hexosaminidase release and the secretion of IL‐4, TNF‐α and IL‐6 from RBL‐2H3 cells.Conclusions
Oral treatment with both viable and heat‐inactivated Lact. sakei probio 65 inhibits skin inflammation and AD‐like skin lesions, as well as mast cell activation.Significance and Impact of the Study
Lactobacillus sakei probio 65 has an inhibitory effect on atopic dermatitis‐like skin lesions and may represent an effective new anti‐inflammatory agent. 相似文献13.
Brief report: Lactobacillus bulgaricus GLB44 (Proviotic™) plus esomeprazole for Helicobacter pylori eradication: A pilot study
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Background
Recent studies of Lactobacillus delbrueckii subsp. bulgaricus GLB44 plus a proton‐pump inhibitor (PPI) reported cures of more than 90% of patients with active Helicobacter pylori infections.Aim
To confirm the high H. pylori cure rates reported previously.Method
A pilot study was done in healthy H. pylori‐infected volunteers using 3‐gram sachet (3 billion cells) of L. delbrueckii GLB44 plus 22.3 mg of esomeprazole b.i.d., for 14 days. The result was determined by urea breath testing 4 weeks after therapy. Stopping rules required for ending enrollment if less than 3 of the first 10 subjects were cured.Results
Nine subjects were entered and because all failed to achieve negative urea breath test, the stopping rule required the study to end.Conclusion
We were unable to confirm reports of achieving a high H. pylori cure rate with L. delbrueckii GLB44 plus a PPI. 相似文献14.
Aims
The present study was carried out to screen the phylloplane bacteria from tea for antagonism against grey blight caused by Pestalotiopsis theae and blister bight caused by Exobasidium vexans and to further evaluate the efficient isolates for disease control potential under field condition.Methods and Results
A total of 316 morphologically different phylloplane bacteria were isolated. Among the antagonists, the isolates designated as BMO‐075, BMO‐111 and BMO‐147 exhibited maximum inhibitory activity against both the pathogens under in vitro conditions and hence were selected for further evaluation under microplot field trial. Foliar application of 36‐h‐old culture of BMO‐111 (1 × 108 colony‐forming units ml?1) significantly reduced the blister blight disease incidence than the other isolates. The culture of BMO‐111 as well as its culture filtrate effectively inhibited the mycelial growth of various fungal plant pathogens. The isolate BMO‐111 was identified as Ochrobactrum anthropi based on the morphological and 16S rDNA sequence analyses.Conclusions
It could be concluded that the biocontrol agent O. anthropi BMO‐111 was effective against blister blight disease of tea.Significance and Impact of the Study
Further study is required to demonstrate the mechanism of its action and formulation for the biocontrol potential against blister blight disease of tea. 相似文献15.
Background
Knowledge of antimicrobial susceptibility, especially to macrolides, has become crucial for the management of Helicobacter pylori infection. Our aim was to evaluate two new PCR kits able to detect H. pylori in gastric biopsies as well as the mutations associated with macrolide resistance.Materials and Methods
Two hundred successive biopsies (received from gastroenterologists all over France) were used. The two new kits tested were Amplidiag H. pylori+ClariR from Mobidiag Espoo, Finland, and RIDA®GENE H. pylori from R‐Biopharm, Darmstadt, Germany. Culture and a validated in‐house real‐time PCR were also performed, and in the case of a positive culture, Etest for clarithromycin was carried out. Discrepancies were solved by looking at the pathologic data.Results
Culture was positive in 68 cases (34%), and with our in‐house real‐time PCR in these 68 cases plus 5 others (N = 73, 36%). All were also detected by the two new kits. In addition, RIDA®GENE H. pylori detected one more positive also detected by Amplidiag H. pylori+ClariR, and Amplidiag detected two other positives. Of these three additional cases, pathology confirmed the positivity for two. Only one case diagnosed by Amplidiag could be considered as a false positive. With regard to clarithromycin resistance, 22 cases were detected. The corresponding mutations (A2142/43G) were all identified with the three PCRs.Conclusions
These two new kits which have an excellent sensitivity and specificity are convenient to use, adaptable to different thermocyclers, provide quick results, and deserve to be used in H. pylori diagnosis for a better choice of treatment regimen. 相似文献16.
Detection of Helicobacter pylori in stool samples of young children using real‐time polymerase chain reaction
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Background
The aims of this study were to develop and validate a multiplex real‐time polymerase chain reaction (q‐PCR) assay of Helicobacter pylori in stool samples of healthy children. Additionally, we determined the prevalence of clarithromycin resistance and cagA gene in H. pylori‐positive samples.Materials and methods
Archived stool samples from 188 children aged 6‐9 years and 272 samples of 92 infants aged 2‐18 months were tested for H. pylori antigens using enzyme immunoassay (EIA). A multiplex q‐PCR assay was designed to detect H. pylori 16S rRNA and urease and the human RNase P gene as an internal control. Kappa coefficient was calculated to assess the agreement between q‐PCR and EIA.Results
Laboratory validation of the q‐PCR assay using quantitated H. pylori ATCC 43504 extracted DNA showed S‐shaped amplification curves for all genes; the limit of detection was 1 CFU/reaction. No cross‐reactivity with other bacterial pathogens was noted. Applying the multiplex q‐PCR to DNA extracted from fecal samples showed clear amplification curves for urease gene, but not for 16S rRNA. The prevalence of H. pylori infection was 50% (95% CI 43%‐57%) by q‐PCR (urease cycle threshold <44) vs 59% (95% CI 52%‐66%) by EIA. Kappa coefficient was .80 (P < .001) and .44 (P < .001) for children aged 6‐9 years and 2‐18 months, respectively. Sixteen samples were positive for cagA and three were positive for clarithromycin resistance mutation (A2143G) as confirmed by sequencing.Conclusions
The developed q‐PCR can be used as a cotechnique to enhance the accuracy of H. pylori detection in epidemiological studies and in clinical settings. 相似文献17.
MIF‐173G/C (rs755622) polymorphism as a risk factor for acute lymphoblastic leukemia development in children
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Background
Macrophage inhibitory factor (MIF) is a pro‐inflammatory cytokine modulating monocyte motility and a pleiotropic regulator of different biological and cellular processes. The MIF‐173G/C (rs755622) polymorphism is found in the promoter region and affects its activity. The present study investigated the MIF polymorphism as a risk factor for the development of acute lymphoblastic leukemia (ALL) in Egyptian children.Methods
We analyzed the MIF‐173G/C (rs755622) polymorphism in 180 ALL cases and 150 healthy control children by amplification of the gene using a polymerase chain reaction followed by restriction endonuclease digestion and running on an agarose gel for visualization of the product.Results
We found a significant incidence of the homozygous polymorphic (CC) genotype and the combined polymorphic genotypes (GC + CC) in ALL patients compared to healthy controls (p = 0.001 and p = 0.007, respectively), whereas the wild‐type genotype (GG) was more common in healthy controls (p = 0.006). Multivariate logistic regression analysis adjustment for MIF different genotypes and other potential risk factors such as age, sex and parental smoking indicated that the CC genotype is the only significant risk factor for the test (p = 0.02). We also noted that, by increasing the C‐allele representation within the gene [GC, CC], there was an increase in total leukocytic count (p = 0.09 and p = 0.001, respectively) that may reflect the bad prognostic impact of the polymorphic allele, although further studies are needed.Conclusions
The results of the present study indicate that the MIF‐173G/C (rs755622) polymorphism is a risk factor for childhood ALL development with respect to both homozygous and combined polymorphic genotypes. In addition, the increased leukocytic count in synchronization with the increased representation of the polymorphic C‐allele may reflect its bad prognostic impact. 相似文献18.
N. Nayan A.S.M. Sonnenberg W.H. Hendriks J.W. Cone 《Journal of applied microbiology》2018,125(2):468-479
Aim
In this study, the biological variation for improvement of the nutritive value of wheat straw by 12 Ceriporiopsis subvermispora, 10 Pleurotus eryngii and 10 Lentinula edodes strains was assessed. Screening of the best performing strains within each species was made based on the in vitro degradability of fungal‐treated wheat straw.Methods and Results
Wheat straw was inoculated with each strain for 7 weeks of solid state fermentation. Weekly samples were evaluated for in vitro gas production (IVGP) in buffered rumen fluid for 72 h. Out of the 32 fungal strains studied, 17 strains showed a significantly higher (P < 0·05) IVGP compared to the control after 7 weeks (227·7 ml g?1 OM). The three best Ceriporiopsis subvermispora strains showed a mean IVGP of 297·0 ml g?1 OM, while the three best P. eryngii and L. edodes strains showed a mean IVGP of 257·8 and 291·5 ml g?1 OM, respectively.Conclusion
Ceriporiopsis subvermispora strains show an overall high potential to improve the ruminal degradability of wheat straw, followed by L. edodes and P. eryngii strains.Significance and Impact of the Study
Large variation exists within and among different fungal species in the valorization of wheat straw, which offers opportunities to improve the fungal genotype by breeding. 相似文献19.
Anna Schleimer Alain C. Frantz Lorraine Richart Jörg Mehnert Gono Semiadi Wirdateti Johanna Rode-Margono Michel Mittelbronn Stuart Young Frank Drygala 《Diversity & distributions》2023,29(6):713-726
Aim
The biodiversity of the Malay Archipelago is the product of the region's rich biogeographical history with periods of island connectivity and isolation during the Pleistocene glacial cycles. Here, the case of two endemic suid species, the Javan (Sus verrucosus) and Bawean (S. blouchi) warty pigs, was used to illustrate how biogeographic processes and recent anthropogenic pressures can shape demographic histories with significant implications for species conservation.Location
Malay Archipelago, with focus on Bawean and Java.Methods
We employed genome-wide single nucleotide polymorphisms from the Porcine SNP60 v2 BeadChip to assess interspecific genetic differentiation, to estimate divergence times and to perform demographic model selection.Results
In contrast to the hypothesis of recent divergence during the last glacial maximum, S. blouchi was found to have diverged from S. verrucosus at least 166 k years ago following a founder event. The contemporary S. blouchi population was characterised by a recent bottleneck that reduced the effective population size to less than 20. The genomic assessment supports the single species status of S. blouchi, as was previously proposed based on morphometrics. The demographic history of S. verrucosus showed evidence of secondary contact with the sympatric banded pig (S. scrofa vittatus) that colonised Java 70 k years ago.Main Conclusions
While the Javan and Bawean warty pigs have persisted throughout the Pleistocene climatic oscillations, contemporary pressures from human activities threaten their survival and immediate action should be taken to grant legal protection to both S. verrucosus and S. blouchi. This study highlighted the use of demographic history modelling using genomic data to identify evolutionary significant units and inform conservation. 相似文献20.
Y.‐H. Hsu S.R. Cook T.W. Alexander C.L. Klima Y.D. Niu L.B. Selinger T.A. McAllister 《Journal of applied microbiology》2013,114(6):1592-1603