Comments on "The Energetic Metabolism of the European Union and the United States" by Haberl and Colleagues: Theoretical and Practical Considerations on the Meaning and Usefulness of Traditional Energy Analysis

This commentary responds to the study "The Energetic Metabolism of the European Union and the United States: Decadal Energy Input Time-Series with an Emphasis on Biomass" by Haberl and colleagues, published in this issue. Their article provides an analysis based on a set of data that could be very useful for discussing the sustainability of economic processes in terms of resource flows and societal relations to nature. The authors' choice to adopt a reductionist analysis of the metabolism of societies in energetic terms—that is, an analysis based on a single-scale and single-variable indicator such as "joules of energy input metabolized per year for the whole society"—is a controversial one. Such a choice implies the aggregation of different types of data (referring to nonequivalent categories of energy inputs) into a single overall assessment. That is, in their study the authors are adopting an old and controversial solution for aggregating different types of energy forms: applying a set of flat conversion factors (calorimetric equivalent) to the different types of energy inputs considered.
This commentary discusses the trade-off entailed by any method of aggregation of energy forms of different quality: (i) compression—reducing the number of indices used—versus (ii) relevance—maintaining a diversity of categories needed for the usefulness of the analysis. A brief history of the main strategies adopted, so far, for dealing with the problem of aggregation suggests implications for the approach adopted by Haberl and colleagues.     

3D Nanostructures for the Next Generation of High‐Performance Nanodevices for Electrochemical Energy Conversion and Storage

Among the different nanostructures that have been demonstrated as promising materials for various applications, 3D nanostructures have attracted significant attention as building blocks for constructing high‐performance nanodevices. Particularly over the last decade, considerable research efforts have been devoted to designing, fabricating, and evaluating 3D nanostructures as electrodes for electrochemical energy conversion and storage devices. Although remarkable progress has been achieved, the performance of electrochemical energy devices based on 3D nanostructures in terms of energy conversion efficiency, energy storage capability, and device reliability still needs to be significantly improved to meet the requirements for practical applications. Rather than simply outlining and comparing different 3D nanostructures, this article systematically summarizes the general advantages as well as the existing and future challenges of 3D nanostructures for electrochemical energy conversion and storage, focusing on photoelectrochemical water splitting, photoelectrocatalytic solar‐to‐fuels conversion from nitrogen and carbon dioxide, rechargeable metal‐ion batteries, and supercapacitors. A comprehensive understanding of these advantages and challenges shall provide valuable guidelines and enlightenments to facilitate the further development of 3D nanostructured materials, and contribute to the achieving more efficient energy conversion and storage technologies toward a sustainable energy future.     

Oscillations and efficiency in glycolysis

We suggest that temporal oscillations of concentrations of intermediates in biochemical reaction systems may enhance the efficiency of free energy conversion (reduce dissipation) in those reactions. Experiments on glycolysis are used to estimate the Gibbs free energy changes along the glycolysis mechanism, and to postulate a construct for the glycolysis "machine" which involves: the PFK reaction as the primary oscillophor; the GAPDH reaction as a phase-shifting device; and the PK reaction with the property of intrinsic oscillatory response at resonance with the driving frequency. Analysis of a simple reaction mechanism with these postulated properties shows that the conversion of free energy from reactants to products is more efficient in an oscillatory than a steady state operation. The efficiency of free energy conversion in glycolysis from glucose + ADP to products + ATP is estimated to be increased by 5--10% due to oscillations. This may have been relevant for the evolutionary development of oscillations such as in glycolysis, especially in anaerobic cells.     

Estimating global "blue carbon" emissions from conversion and degradation of vegetated coastal ecosystems

Recent attention has focused on the high rates of annual carbon sequestration in vegetated coastal ecosystems-marshes, mangroves, and seagrasses-that may be lost with habitat destruction ('conversion'). Relatively unappreciated, however, is that conversion of these coastal ecosystems also impacts very large pools of previously-sequestered carbon. Residing mostly in sediments, this 'blue carbon' can be released to the atmosphere when these ecosystems are converted or degraded. Here we provide the first global estimates of this impact and evaluate its economic implications. Combining the best available data on global area, land-use conversion rates, and near-surface carbon stocks in each of the three ecosystems, using an uncertainty-propagation approach, we estimate that 0.15-1.02 Pg (billion tons) of carbon dioxide are being released annually, several times higher than previous estimates that account only for lost sequestration. These emissions are equivalent to 3-19% of those from deforestation globally, and result in economic damages of $US 6-42 billion annually. The largest sources of uncertainty in these estimates stems from limited certitude in global area and rates of land-use conversion, but research is also needed on the fates of ecosystem carbon upon conversion. Currently, carbon emissions from the conversion of vegetated coastal ecosystems are not included in emissions accounting or carbon market protocols, but this analysis suggests they may be disproportionally important to both. Although the relevant science supporting these initial estimates will need to be refined in coming years, it is clear that policies encouraging the sustainable management of coastal ecosystems could significantly reduce carbon emissions from the land-use sector, in addition to sustaining the well-recognized ecosystem services of coastal habitats.     

Commentary on: “Photosynthesis and negative entropy production” by Jennings and coworkers

This commentary argues against the view that photochemical energy conversion violates the second law of thermodynamics, as expressed in a recent paper [R.C. Jennings, E. Engelmann, F. Garlaschi, A.P. Casazza, G. Zucchelli. Photosynthesis and negative entropy production. Biochim. Biophys. Acta 1709 (2005) 251-255]. The basic principles of free energy conversion by a photo-electrochemical cell are outlined, emphasizing the fact that the potential depends on the relative population of the excited state and thus on the illumination intensity.     

Challenges and opportunities for photochemists on the verge of solar energy conversion.

Has photochemistry missed the boat on solar energy conversion? Certainly not, but it is time to reach out and make a difference if we do not want to have to choose between feeding our families or our thirst for fuel. Compared to other initiatives, such as biofuels or nuclear fusion, direct conversion of solar energy into electricity or fuels is lagging behind in terms of funding, and this is slowing progress on overcoming critical bottlenecks. This perspective outlines some of the key fundamental issues in solar energy conversion based on organic photovoltaic devices or artificial photosynthesis where being a photochemist can make a difference.     

Harderian gland: regulation of sexual "type" by gonads and pineal gland

The sexual dimorphism of the Harderian glands of golden hamsters is regulated by a complex interaction of the gonads and pineal gland. Ovariectomy was shown to prevent the conversion to male-type gland which normally follows blinding. Testosterone administration in combination with blinding and ovariectomy promoted the male type. Ovariectomy after 8 wk of blinding was ineffective in reversing the effects of blinding on the Harderian glands, but ovariectomy and pinealectomy caused complete reconversion to the female type. To our knowledge, this is the first report to demonstrate an influence of the ovaries on the Harderian gland of the hamster. In males, administration of testosterone for 7 days after 8 wk of castration was shown to have little effect on the conversion to the female type which normally attends castration, whereas testosterone injection followed by a period of blinding completely reversed the effects of castration on the Harderian gland. These studies, along with previously published reports, strongly suggest that the male-type Harderian gland is expressed whenever significant androgen levels are present, or when the glands are exposed to androgen priming during or just prior to a period of blinding-induced pineal activation. The probable role of ovarian androgens in mediating conversion to the male-type gland is discussed.     

Assessment of black liquor gasification in supercritical water

Supercritical water gasification of black liquor (waste pulping chemicals) has been examined. The aim was to evaluate the feasibility of using this technique to convert such bio-based waste to value added fuel products, as well as recovery of pulping materials. Supercritical gasification may improve overall process efficiency by eliminating the energy intensive evaporation step necessary in conventional process and product gas obtained at high pressure may be ready for utilization without any compression requirement. Appropriate operating parameters, including pressure, temperature, feed concentration, and reaction time, which would yield the highest conversion and energy efficiency were determined. Reaction was performed in a quartz capillary heated in a fluidized bed reactor. Results indicated that pressure between 220 and 400 atm has insignificant influence on the gas products and extent of carbon conversion. Increasing temperature and residence time between 375-650 degrees C and 5-120 s resulted in greater gas production, overall carbon conversion, and energy efficiency. Maximum conversion to H(2), CO, CH(4), and C(2)H(X) was achieved at the highest temperature and longest residence time tested showing an overall carbon conversion of 84.8%, gas energy content of 9.4 MJ/m(3) and energy conversion ratio of 1.2. Though higher carbon conversion and energy conversion ratio were obtained with more dilute liquor, energy content was lower than for those with higher solid contents. Due to anticipated complex design and high initial investment cost of this operation, further studies on overall feasibility should be carried out in order to identify the optimum operating window for this novel process.     

草基-鱼塘生态系统的能量转化与养分循环研究

应用模拟试验的方法,研究了“草基-鱼塘”系统中的能量转化与养分循环.结果表明,该系统中饲草对太阳能的利用率为0.83%,鱼对饲料能的转化率为7.3%.与以粮食作为鱼饲料比较,单位面积草地的产鱼当量是粮食作物的1.6倍.鱼对饲料N、P、K的转化率分别为16.8%、32.3%和2.0%.塘泥沉积的N、P分别占饲料的23.4%和56.1%;猪对饲料N、P、K的转化率分别为20.5%、33.7%和4.6%,猪粪尿回收饲料N为36.4%、P为63.8%、K为39.4%.猪-草-鱼结合的基塘系统其能量和养分转化效率均高于单一的养鱼系统.     

Properties of liposomes that contain chloroplast pigments: Photosensitivity and efficiency of energy conversion

Liposomes that contain chlorophyll and carotene are photosensitive. If a gradient of redox potential exists across the liposome membrane, illumination causes charge transport. The quantum efficiency of energy conversion in liposomes is about 0.075. It appears that chlorophyll aggregates are present in the liposomes and that these aggregates are involved in energy conversion.     

Photosynthesis driven conversion of carbon dioxide to fatty alcohols and hydrocarbons in cyanobacteria

The production of high value biochemicals and high energy biofuels from sustainable resources through the use of microbial based, green conversion technologies could reduce the dependence on petrochemical resources. However, a sustainable source of carbon and a clean, cost effective method for its conversion to high quality biofuel products are obstacles that must be overcome. Here we describe the biosynthesis of fatty alcohols in a genetically engineered cyanobacterial system through heterologously expressing fatty acyl-CoA reductase and the effect of environmental stresses on the production of fatty alcohols in the mutant strains. Hydrocarbon production in three representative types of native cyanobacterial model strains and the mutant strain overexpressing acetyl-CoA carboxylase was evaluated. The results of this investigation demonstrate the potential for direct production of high value chemicals and high energy fuels in a single biological system that utilizes solar energy as the energy source and carbon dioxide as the carbon source.     

Bioprospecting microalgae as potential sources of "green energy"--challenges and perspectives (review)

Microalgae and cyanobacteria are potential foods, feeds, sources of high-value bioactive molecules and biofuels, and find tremendous applications in bioremediation and agriculture. Although few efforts have been undertaken to index the microalgal germplasm available in terms of lipid content, information on suitability of strains for mass multiplication and advances in development of methods for extraction and generating biofuel are scarce. Our review summarizes the potential of microalgae, latest developments in the field and analyzes the "pitfalls" in oversimplification of their promise in the years to come. Microalgae represent "green gold mines" for generating energy; however, the path to success is long and winding and needs tremendous and concerted efforts from science and industry, besides political will and social acceptance for overcoming the limitations. The major advantages of second generation biofuels based on microalgal systems, include their higher photon conversion efficiency, growth all around the year, even in wastewaters, and production of environment friendly biodegradable biofuels.     

Parametric energy conversion--a possible, universal approach to bioenergetics in biological structures.

It is shown that the mechanism of parametric energy conversion—a non-linear phenomenon which is known to occur in all branches of physics—may play a fundamental role in energy conversion in biological structures. Parametric energy conversion means pumping of energy through the variation of an energy storing quantity (a parameter). In biological systems the energy storing parameter is the membrane itself, the structure and composition of which is varied by proceeding structure bound biochemical reactions. The principle of parametric energy conversion is introduced into a molecular kinetical model and three coupled differential equations are derived, which interconnect chemical, electrical and mechanical energy in biological structures. It is shown that they describe parametric pumping of energy. It is a particular mechanism, which is also found in the physical phenomenon of Bethenod. The mechanism is tested with the derivation and explanation of various important bioenergetical functions as special cases of parametric energy conversion, of ATP synthesis, the pumping of ions and molecules during active transport, the excitability of nerve membranes and the dynamics of oscillatory muscles. A new interpretation of the connection of structure and function in striated muscles is also derived and signal transformation in receptors discussed. It is suggested that parametric energy conversion may be the uniform basis of energy conversion in biological structures and that the path of bioenergetic evolution might have essentially followed the line marked by the characteristic properties of this flexible mechanism. The parametric hypothesis offers an elegant ordering scheme and reasonable explanation for evolution and function of a large variety of important bioenergetic mechanisms. In order to handle the intricate mechanism properly it would be necessary to give up the conventional, intuitive way of formulating and understanding biochemical mechanisms and to develop a new dimension of chemical thinking.     

Shape Conformal and Thermal Insulative Organic Solar Absorber Sponge for Photothermal Water Evaporation and Thermoelectric Power Generation

Solar‐driven interfacial vaporization by localizing solar‐thermal energy conversion to the air–water interface has attracted tremendous attention due to its high conversion efficiency for water purification, desalination, energy generation, etc. However, ineffective integration of hybrid solar thermal devices and poor material compliance undermine extensive solar energy exploitation and practical outdoor use. Herein, a 3D organic bucky sponge that has a combination of desired chemical and physical properties, i.e., broadband light absorbing, heat insulative, and shape‐conforming abilities that render efficient photothermic vaporization and energy generation with improved operational durability is reported. The highly compressible and readily reconfigurable solar absorber sponge not only places less constraints on footprint and shape defined fabrication process but more importantly remarkably improves the solar‐to‐vapor conversion efficiency. Notably, synergetic coupling of solar‐steam and solar‐electricity technologies is realized without trade‐offs, highlighting the practical consideration toward more impactful solar heat exploitation. Such solar distillation and low‐grade heat‐to‐electricity generation functions can provide potential opportunities for fresh water and electricity supply in off‐grid or remote areas.     

Construct conversions caused by simultaneous co-transfection: "GFP-walking"

Several GFP variants have been developedfor multicolor labeling in vivo. Here we report that simultaneous co-transfection of fluorescent protein chimeras can give false-positive results caused by the conversion of spectral properties. Under standard transfection conditions, approximately 8% of cells produce false-positive results, but, depending on the conditions, up to 26% of the cells permanently express altered fusion proteins. This compromises the interpretation of the results. The conversion is independent of transfection methods or cell types. Our results show that the effect is based on homologous recombination/repair/replication process events that occur between the nucleotide sequences of the fluorescent proteins. Consecutive transfection or low sequence similarities avoided recombination. The appearance of conversion facilitates exchanges of spectral properties infusion proteins, the creation of libraries, or the assembly of DNA fusion constructs in vivo. The detailed quantification of the conversion rate allows the investigation of recombination/repair/replication processes in general.     

Biological conversion of methane to liquid fuels: Status and opportunities

Methane is the main component of natural gas and biogas. As an abundant energy source, methane is crucial not only to meet current energy needs but also to achieve a sustainable energy future. Conversion of methane to liquid fuels provides energy-dense products and therefore reduces costs for storage, transportation, and distribution. Compared to thermochemical processes, biological conversion has advantages such as high conversion efficiency and using environmentally friendly processes. This paper is a comprehensive review of studies on three promising groups of microorganisms (methanotrophs, ammonia-oxidizing bacteria, and acetogens) that hold potential in converting methane to liquid fuels; their habitats, biochemical conversion mechanisms, performance in liquid fuels production, and genetic modification to enhance the conversion are also discussed. To date, methane-to-methanol conversion efficiencies (moles of methanol produced per mole methane consumed) of up to 80% have been reported. A number of issues that impede scale-up of this technology, such as mass transfer limitations of methane, inhibitory effects of H₂S in biogas, usage of expensive chemicals as electron donors, and lack of native strains capable of converting methane to liquid fuels other than methanol, are discussed. Future perspectives and strategies in addressing these challenges are also discussed.     

基于能流物流理论的农牧交错带生态治理模式研究——以内蒙古后山旱农区为例

中国北方农牧交错带的生态环境问题引起了人们广泛关注．经过多年的攻关研究。以能物流理论为指导,根据地处北方农牧交错带的后山旱农区的自然、社会、经济特征,提出了以丘陵为单元的生态治理模式,1999年对传统顺坡种植模式、人工草地模式和生态治理模式进行观测．能物流分析结果表明。生态治理模式与传统的种植模式相比,能提高太阳能利用率8．3％,提高能量输出量8．7％,提高能量转化效率19．4％,N的输出量提高26．5％,转化效率提高57．1％,P的输出量提高12．1％,转化效率提高45．0％。水分利用效率提高17．7％．人工草地模式与传统模式和生态治理模式相比,其太阳能利用率、能量输出量、能量转化效率都是最低的．治理模式产出最多,盈利最多,是经济效益最好的模式,经济效率比传统模式提高16．1％。     

Regulation of oxidative phosphorylation complex activity: effects of tissue-specific metabolic stress within an allometric series and acute changes in workload

The concentration of mitochondrial oxidative phosphorylation complexes (MOPCs) is tuned to the maximum energy conversion requirements of a given tissue; however, whether the activity of MOPCs is altered in response to acute changes in energy conversion demand is unclear. We hypothesized that MOPCs activity is modulated by tissue metabolic stress to maintain the energy-metabolism homeostasis. Metabolic stress was defined as the observed energy conversion rate/maximum energy conversion rate. The maximum energy conversion rate was assumed to be proportional to the concentration of MOPCs, as determined with optical spectroscopy, gel electrophoresis, and mass spectrometry. The resting metabolic stress of the heart and liver across the range of resting metabolic rates within an allometric series (mouse, rabbit, and pig) was determined from MPOCs content and literature respiratory values. The metabolic stress of the liver was high and nearly constant across the allometric series due to the proportional increase in MOPCs content with resting metabolic rate. In contrast, the MOPCs content of the heart was essentially constant in the allometric series, resulting in an increasing metabolic stress with decreasing animal size. The MOPCs activity was determined in native gels, with an emphasis on Complex V. Extracted MOPCs enzyme activity was proportional to resting metabolic stress across tissues and species. Complex V activity was also shown to be acutely modulated by changes in metabolic stress in the heart, in vivo and in vitro. The modulation of extracted MOPCs activity suggests that persistent posttranslational modifications (PTMs) alter MOPCs activity both chronically and acutely, specifically in the heart. Protein phosphorylation of Complex V was correlated with activity inhibition under several conditions, suggesting that protein phosphorylation may contribute to activity modulation with energy metabolic stress. These data are consistent with the notion that metabolic stress modulates MOPCs activity in the heart.     

Application of electrochemical kinetics to photosynthesis and oxidative phosphorylation: The redox element hypothesis and the principle of parametric energy coupling

It is suggested that the transfer of electrons within the biological electron transfer chain is subject to the laws of electrochemical kinetics, when membrane-bound electron carriers are involved. Consequently, small tightly bound molecular complexes of two or more electron transfer proteins of different redox potential within an energy transducing membrane, which accept electrons from a donor at one membrane surface and donate it to an acceptor at the other, may be regarded as real and functioning molecular redox elements, which convert the free energy of electrons into electrochemical energy. Especially, the transfer of an electron from excited chlorophyll to an electron acceptor can be looked upon as an electrochemical oxidation of excited chlorophyll at such a complex. In this reaction the electron acceptor complex behaves like a polarized electrode, in which the electrochemical potential gradient is provided by a gradient of redox potential of its constituents.Calculations and qualitative considerations show that this concept leads to a consistent understanding of both primary and secondary reactions in photosynthesis (electron capture, delayed light emission, ion transfer, energy conversion) and can also be applied to oxidative phosphorylation. Within the proposed concept, ion transfer and the development of ion gradients have to be considered as results of electrochemical activity—not as intermediates for energy conversion. For energetic reasons, a non steady state, periodic energy coupling mechanism is postulated which functions by periodic changes of the capacity of the (electrochemically) charged energy transducing membrane, during which capacitive surplus energy is released as chemical energy. Energy transducing membranes may thus be considered as electrochemical parametric energy transformers. This concept explains active periodic conformation changes and mechanochemical processes of energy transducing membranes as energetically essential events, which trigger energy conversion according to the principle of variable parameter energy transformers.The electrochemical approach presented here has been suggested and is supported by the observation, that with respect to electron capture and conversion of excitation energy into electrochemical energy, the behaviour of excited chlorophyll at suitable solid state (semiconductor) electrodes is very similar to that of chlorophyll in photosynthetic reaction centers.     

Temperature-dependent switching between "wild-type" and "mutant" forms of p53-Val135

The p53 gene is a suppressor of abnormal cell growth but is also subject to oncogenic activation by mutation. The mutant allele p53-Val135, has recently been discovered to be temperature-sensitive and functions as an oncogene at 37 degrees C and as a tumor suppressor at 32.5 degrees C. In order to investigate the molecular mechanism underlying the temperature sensitivity of p53-Val135 rabbit reticulocyte lysate was used to translate the p53 mRNAs in vitro at 37 degrees C and at 30 degrees C. The immunoreactivity and T antigen binding of wild-type protein p53-Ala135 were unaffected by temperature and were similar to wild-type p53 expressed in vivo. In contrast, the mutant p53-Val135 protein was markedly affected by temperature. At 37 degrees C p53-Val135 showed reduced T antigen binding and did not react with monoclonal antibodies PAb246 and PAb1620. At 30 degrees C, p53-Val135 behaved as the wild-type p53. Temperature also exerted a post-translational effect on p53-Val135 with complete conversion from wild-type to mutant phenotype within two minutes of temperature shift from 30 degrees C to 37 degrees C. There was incomplete conversion from mutant to wild-type phenotype when the temperature was shifted down from 37 degrees C to 30 degrees C. We propose that the temperature dependent forms of p53-Val135 represent conformational variants of the p53 protein with opposing functions in cell growth control.