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1.
The paper is a taxonomic study of the limnetic Daphnia populations of the English Lake District, the populations upon which the most popular taxonomic scheme is based (Johnson, 1952).
Johnson treats these populations as three varieties of the species D. hyalina, namely D. hyalina s. str., D.h. var. galeata and D.h. var. lacustris .
Careful examination of the populations of Esthwaite reveals that what has previously been regarded as a population of a single variety of D. hyalina. includes three distinct forms. Experimental work confirms that these are genetically distinct. One of these forms corresponds to D. hyalina var. galeata , whilst the other two are designated the "toothed" and "round-headed" forms.
The first part of the paper is concerned with the taxonomic status of var. galeata . Brooks (1957) and some later workers treat this as a separate species (D. galeata) on morphological grounds. This is fully supported by the present work. Differences between var. galeata and co-existing forms in incidence of sexual reproduction, in vertical distribution and in seasonal abundance and average brood-size provide further support for the separation of D. galeata.
The second part of the paper is concerned with D. hyalina s.str. which, on the basis of morphology, ecology and reproductive behaviour, is shown to be at least as distinct from other members of the complex as is D. galeata . It is argued that other forms should therefore to be removed from D. hyalina . The taxonomic status and affinities of the remaining "toothed" and "round-headed" forms are discussed.  相似文献   

2.
Fungi able to survive under the extreme environment of soda lakes remain poorly studied. This paper presents data on the diversity and ecophysiology of filamentous fungi inhabiting one of the most alkaline habitats of the Earth: Lake Magadi, where pH values may exceed 11–12. The lake is home to a large number of prokaryotes, which form complex communities with algae and some other eukaryotes. In this study, 22 species of filamentous fungi isolated from soil samples collected on the coastline of Lake Magadi have been characterized using a systematic approach, which includes selective isolation, an analysis of morphological traits, molecular–genetic analysis, growth experiments to determine pH and temperature preferences, and an analysis of the dependence on NaCl concentrations. According to the results, alkaline soil from the Lake Magadi coastline is colonized by fungi with differing types of adaptation to high pH values. Alkaliphilic and alkalitolerant fungi belong to different families of Ascomycetes, mainly to Plectosphaerellaceae, as well as to Onygenaceae, Trihocomaceae, and Pleosporaceae. Sodiomyces tronii and S. magadii are new obligate alkaliphilic species within the earlier monotypic genus Sodiomyces (Plectosphaerellaceae). According to the growth experiments, obligate alkaliphilic isolates demonstrate thermo- and halotolerant properties. The problems of adaptation to the external pH, possible substrate preferences, and association of alkaliphilic fungi with other organisms are discussed.  相似文献   

3.
Powdery mildew fungi (Erysiphales, Ascomycota) are obligate biotrophs that infect a wide range of angiosperms. Phylogenetic analyses based on the nucleotide sequences of the nuclear ribosomal DNA revealed that the powdery mildew fungi are divided into five major lineages. The respective lineage was well defined by the morphology of conidial stage, but not of ascomata. In this fungal group, tree-parasitic taxa are generally ancestral, and multiple events of host expansion from trees to herbs have occurred within the respective lineage. Accompanying the host expansion to herbs, simplification of appendage morphology has occurred multiple times. The simple, mycelioid appendages are thus a result of convergence. The host expansion route was investigated in detail in the tribe Cystotheceae. Two sections of the genus Sphaerotheca were derived from the genus Podosphaera separately. The section Magnicellulatae was derived from a Podosphaera species parasitic to Prunus (Rosaceae), acquired parasitism to the Scrophulariaceae, and then expanded host range into the Asteraceae. After genetic radiation on the Asteraceae, they further expanded their host ranges into other plant families. According to the molecular clock (1.26%/100 million years, myr) reported by Berbee and Taylor, splitting of the Erysiphales and the Myxotrichaceae and first divergence within the Erysiphales was calculated to have occurred 100 and 76myr ago, respectively.  相似文献   

4.
A new species of halophilic anoxygenic purple bacteria of the genus Rhodospirillum is described. The new organism, isolated from water/sediment of the Dead Sea, was vibrio-shaped and an obligate halophile. Growth was best at 12% NaCl, with only weak growth occurring at 6% or 21% NaCl. Growth occurred at Mg2+ concentrations up to 1 M but optimal growth was obtained at 0.05–0.1 M Mg2+. Bromide was well tolerated as an alternative anion to chloride. The new organism is an obligate phototroph, growing photoheterotrophically in media containing yeast extract and acetate or a few other organic compounds. Growth of the Dead Sea Rhodospirillum species under optimal culture conditions was slow (minimum td 20 h). Cells contained bacteriochlorophyll a and carotenoids of the spirilloxanthin series and mass cultures were pink in color. Absorption spectra revealed the presence of a B875 (light-harvesting I) but no B800/B850 (light-harvesting II) photopigment complex. The new organism shares a number of properties with the previously described halophilic phototrophic bacterium Rhodospirillum salinarum and was shown to be related to this phototroph by 16S rRNA sequencing. However, because of its salinity requirements, photosynthetic properties, and isolation from the Dead Sea, the new phototroph is proposed as a new species of the genus Rhodospirillum, R. sodomense.  相似文献   

5.
Four strains of an ascogenous yeast were isolated from the guts of the woodlice species Armadillidium vulgare (Latreille). This yeast differed from all known yeasts by its inability to grow in culture without the presence of a metabolite produced by some common soil fungi such as Cladosporium cladosporioides, Aspergillus alliaceus, and Penicillium spp. Phylogenetic analysis based on 18S rDNA and 26S rDNA (domain D1/D2) sequences indicated that the yeast represents a new taxon in the genus Debaryomyces. The new species Debaryomyces mycophilus is thus proposed. It was, furthermore, shown that the fungal metabolite necessary for growth of D. mycophilus did not provide the yeast with carbon, nitrogen or vitamins. The active compound was partially purified and it was shown that it is a siderophore used by the yeast as a source of iron. The addition of ferrichrome or high concentrations of FeCl(3) to growth media replaced the obligate dependence on a fungal metabolite. Symbiosis among fungi, based on the availability and utilization of iron, is an aspect of mycology that has not previously been recognized. The addition of chelated iron to isolation media could lead to the discovery of many unknown yeasts and fungi.  相似文献   

6.
The composition of the dinoflagellate genus Amphidinium is currently polyphyletic and includes several species in need of re-evaluation using modern morphological and phylogenetic methods. We investigated a broad range of uncultured morphotypes extracted from marine sediments in the Eastern Pacific Ocean that were similar in morphology to Amphidinium glabrum Hoppenrath and Okolodkov. To determine the number of distinct species associated with this phenotypic diversity, we collected LM, SEM, TEM and small subunit ribosomal DNA sequence information from different morphotypes, including the previously described A. glabrum. Both comparative morphological and molecular phylogenetic data supported the establishment of a new genus, Apicoporus n. gen., including at least two species, A. glaber n. comb., and A. parvidiaboli n. sp. Apicoporus is characterized by having amphiesmal pores and an apical pore covered by a hook-like protrusion; neither of these characters has been observed in other athecate dinoflagellates. The posterior end of Apicoporus parvidiaboli possessed varying degrees of "horn formation", ranging from slight to prominent. By contrast, the posterior end of Apicoporus glaber was distinctively rounded and lacked evidence of horn formation. Although these species were previously interpreted to be obligate heterotrophs, TEM and epifluorescence microscopy demonstrated that some cells of both species had unusually small but otherwise typical dinoflagellate plastids. The number and density of plastids in any particular cell varied significantly in the genus, but the plastids were almost always concentrated at the posterior end of the cells or around the nucleus. The presence of cryptic photosynthetic plastids in these benthic species suggests that photosynthesis might be much more widespread in dinoflagellates than is currently assumed.  相似文献   

7.
The genus Diaporthe (asexual state: Phomopsis) comprises pathogenic, endophytic and saprobic species with both temperate and tropical distributions. Although species of Diaporthe have in the past chiefly been distinguished based on host association, studies have confirmed several taxa to have wide host ranges, suggesting that they move freely between hosts, frequently co-colonizing diseased or dead tissue, while some species are known to be host-specific. They are also very frequently isolated as endophytes of seed plants. Due to their importance as plant pathogens, the genus has been thoroughly investigated for secondary metabolites, including during screening programs aimed at the discovery of novel bioactive natural products, but the respective information has never been compiled. Therefore, we have examined the relevant literature to explore and highlight the major classes of metabolites of Diaporthe and their Phomopsis conidial states. These fungi predominantly produce a large number of polyketides, but cytochalasins and other types of commonly encountered fungal secondary metabolites are also predominant in some species. Interestingly, not a single metabolite which is also known from the host plant has ever been isolated as a major component from an endophytic Diaporthe strain, despite the fact that many of the recent studies were targeting endophytic fungi of medicinal plants.  相似文献   

8.
? Premise of the study: The Orchidaceae is characterized by exceptional species diversity. Obligate orchid mycorrhizae are predicted to determine orchid distributions, and highly specific relationships between orchids and fungi may drive orchid diversification. In this study, mycorrhizal diversity was examined in the terrestrial, photosynthetic orchid genus Chiloglottis to test the hypothesis of mycorrhizal-mediated diversification in the genus Chiloglottis. This orchid genus secures pollination by sexual deception, an obligate and highly specific pollination strategy. Here we asked whether the obligate orchid-fungal interactions are also specific. ? Methods: Two sequenced loci, the internal transcribed spacer region (ITS) and mitochondrial large subunit (mtLSU), were used to identify fungal isolates and assess fungal species diversity. Symbiotic germination of two species Chiloglottis aff. jeanesii and C. valida were used to assess germination potential of isolates and confirm mycorrhizal association. ? Key results: Phylogenetic analyses revealed that six representative Chiloglottis species spanning a broad survey of the genus were all associated with a narrow group of monophyletic Tulasnella fungal lineages. ? Conclusions: The Chiloglottis-Tulasnella interaction appears to be the first known case of such a narrow symbiont association across a broadly surveyed orchid genus. It appears that the specific pollination system of Chiloglottis, rather than specific orchid-fungal interactions has been the key driving force in the diversification of the genus. These findings also indicate that plant groups with highly specific mycorrhizal partners can have a widespread distribution.  相似文献   

9.
Summary Apomixis, asexual reproduction through seed, is an obligate mode of reproduction in several species from the genus Pennisetum. Transfer of apomixis to sexual, cultivated pearl millet (P. glaucum) from a wild species P. squamulatum has resulted in an obligate apomictic backcross line with a low, but unknown number, of chromosomes from the wild species. Molecular markers (restriction fragment length polymorphisms and random amplified polymorphic DNAs) have been identified that unequivocally demonstrate the presence of P. squamulatum DNA in BC3. Three of the informative RFLP clones have been sequenced and converted to sequence-tagged sites that can be amplified by the polymerase chain reaction. Molecular genetic analysis of more advanced back-cross individuals, using the two types of polymerase chain reaction-based molecular markers, has demonstrated co-inheritance of apomictic reproduction and two of the molecular markers. The remaining five molecular markers generally co-segregate with each other but are not linked with the mode of reproduction. These results suggest that genes for apomixis apparently can be transmitted by a single chromosome. Chromosome-specific markers will provide a starting point for the mapping of this genetically intractable reproductive trait.  相似文献   

10.
In a screening of natural products with antifungal activity derived from endophytic fungi, we detected a potent activity in a culture belonging to the form-genus Hormonema, isolated from leaves of Juniperus communis. The compound is a new triterpene glycoside, showing an antifungal activity highly potent in vitro against Candida and Aspergillus and with moderate efficacy in an in vivo mouse model of disseminated candidiasis. The agent is especially interesting since its antifungal spectrum and its effect on morphology of Aspergillus fumigatus is comparable to that of the glucan synthase inhibitor pneumocandin B,,, the natural precursor of the clinical candidate MK-0991 (caspofungin acetate). An additional search for other Hormonema isolates producing improved titers or derivatives resulted in the isolation of two more strains recovered from the same plant host showing identical activity. The producing isolates were compared with other non-producing Hormonema strains by DNA fingerprinting and sequencing of the rDNA internal transcribed spacers. Comparison of rDNA sequences with other fungal species suggests that the producing fungus could be an undetermined Kabatina species. Kabatina is a coelomycetous genus whose members are known to produce Hormonema-like states in culture.  相似文献   

11.
Phylogenetic relationships among the Chiastocheta species (Diptera, Anthomyiidae) were investigated using a 1320-bp mitochondrial DNA fragment including parts of cytochrome oxidase subunits I and II. Larvae of the Chiastocheta genus feed exclusively on Trollius (Ranunculaceae) seeds. Six Chiastocheta species (and two vicariant taxa) coexist on Trollius europaeus in Europe, where they were shown to be the sole pollinator of their host plant. In Asia, several Trollius species are parasitized by Chiastocheta spp., and several other Trollius species are free of Chiastocheta. The plant-insect association is thus obligate in Europe but facultative in Asia. This system therefore provides a unique opportunity to study the evolution of an obligate mutualism between a plant and its seed parasite pollinators and its consequences on insect diversification. Most parsimonious, distance, and maximum likelihood analyses of 16 haplotypes from Europe and 14 from Asia show that European species do not form a monophyletic group. The species relationship indicated by egg morphology is only partly supported by molecular data. Moreover, a strong discrepancy between nucleotide variation and male genitalia morphology variation was found, particularly within and among European species coexisting on a single host plant. Molecular divergence across species ranges from 0 to 4.6%, suggesting a recent origin of the genus and several events of diversification, involving both host shifts and within-host-plant radiation. We discuss alternative evolutionary scenarios that are consistent with molecular data.  相似文献   

12.
Peterson KR  Pfister DH  Bell CD 《Mycologia》2010,102(6):1417-1425
The obligate, biotrophic association among species of the fungal genus Cyttaria and their hosts in the plant genus Nothofagus often is cited as a classic example of cophylogeny and is one of the few cases in which the biogeography of a fungus is commonly mentioned or included in biogeographic analyses. In this study molecular and morphological data are used to examine hypotheses regarding the cophylogeny and biogeography of the 12 species of Cyttaria and their hosts, the 11 species of Nothofagus subgenera Lophozonia and Nothofagus. Our results indicate highly significant overall cophylogenetic structure, despite the fact that the associations between species of Cyttaria and Nothofagus usually do not correspond in a simple one to one relationship. Two major lineages of Cyttaria are confined to a single Nothofagus subgenus, a specificity that might account for a minimum of two codivergences. We hypothesize other major codivergences. Numerous extinction also are assumed, as are an independent parasite divergence followed by host switching to account for C. berteroi. Considering the historical association of Cyttaria and Nothofagus, our hypothesis may support the vicariance hypothesis for the trans-Antarctic distribution between Australasian and South American species of Cyttaria species hosted by subgenus Lophozonia. It also supports the hypothesis of transoceanic long distance dispersal to account for the relatively recent relationship between Australian and New Zealand Cyttaria species, which we estimate to have occurred 44.6-28.5 mya. Thus the history of these organisms is not only a reflection of the breakup of Gondwana but also of other events that have contributed to the distributions of many other southern hemisphere plants and fungi.  相似文献   

13.
Understanding the systematics and evolution of clavicipitoid fungi has been greatly aided by the application of molecular phylogenetics. They are now classified in three families, largely driven by reevaluation of the morphologically and ecologically diverse genus Cordyceps. Although reevaluation of morphological features of both sexual and asexual states were often found to reflect the structure of phylogenies based on molecular data, many species remain of uncertain placement due to a lack of reliable data or conflicting morphological characters. A rigid, darkly pigmented stipe and the production of a Hirsutella-like anamorph in culture were taken as evidence for the transfer of the species Cordyceps cuboidea, Cordyceps prolifica, and Cordyceps ryogamiensis to the genus Ophiocordyceps. Data from ribosomal DNA supported these species as a single group, but were unable to infer deeper relationships in Hypocreales. Here, molecular data for ribosomal and protein coding DNA from specimens of Ophiocordyceps cuboidea, Ophiocordyceps ryogamiensis, Ophiocordyceps paracuboidea, Ophiocordyceps prolifica, Cordyceps ramosopulvinata, Cordyceps nipponica, and isolates of Polycephalomyces were combined with a broadly sampled dataset of Hypocreales. Phylogenetic analyses of these data revealed that these species represent a clade distinct from the other clavicipitoid genera. Applying the recently adopted single system of nomenclature, new taxonomic combinations are proposed for these species in the genus Polycephalomyces, which has been historically reserved for asexual or anamorphic taxa.  相似文献   

14.
Ambrosia fungi are a polyphyletic group from currently seven ascomycete and basidiomycete lineages that independently evolved an obligate farming mutualism with wood-boring weevils. One long known, but understudied, association is the mutualism between the scolytine beetle genus Trypodendron (Curculionidae: Xyloterini) and the Microascales fungal genus Phialophoropsis (Ascomycota: Ceratocystidaceae) for which a species-specific association has not been safely established yet. Moreover, the fungal wood degrading capabilities are completely unknown.Here, the ambrosia fungi of three Xyloterini species, Trypodendron domesticum, Trypodendron lineatum and Trypodendron signatum, were isolated and identified using culture-dependent methods. T. lineatum was confirmed to be exclusively associated with Phialophoropsis ferruginea, whereas T. domesticum and T. signatum are associated with a closely related but putatively novel Phialophoropsis species. Investigations of their wood decomposing potential revealed that both fungi mainly depolymerize xylan but are weak mannan decomposers. In addition, robust cellulolytic activity was observed, indicating cellulose as another main carbon source.  相似文献   

15.
Both sexes of Ameira hyalina (Noodt, 1952) and A. parasimulans Lang, 1965 are redescribed. The genus Psammameira Noodt, 1952 previously regarded as a junior subjective synonym of Ameira. is reinstated to accommodate these two species and a revised diagnosis for the genus is presented. Examination of the type material of Psammameira reducta Wells, 1967 and P. gradis (Nicholls, 1939) revealed that they should be removed from the genus. The possible relationships of two species of doubtful affinity, A. esigun T. Scott, 1894 and A. simulans T. Scott, 1912 are reconsidered. The phylogenetic position of Psammameira within the Ameiridae is briefly discussed.  相似文献   

16.
The study of 467 microbial strains obtained from collections and from clinical sources revealed that microorganisms of the genus Staphylococcus were highly sensitive to batumin, a new antibiotic obtained from bacteria of the genus Pseudomonas. 378 strains of 15 Staphylococcus species proved to be highly sensitive to the diagnostic preparation "Diastaph", developed on the basis of batumin (antibiotic-impregnated discs); After 18-hour incubation the diameter of the growth inhibition zones on agar-containing culture media was 18-38 mm. Strains belonging to the genera Micrococcus, Dermacoccus, Kocuria and Kytococcus, as well as the tested representatives of other taxa (Planococcus, Streptococcus, Corynebacterium, Acinetobacter, Pseudomonas, Neisseria, the representatives of all tested genera of the family Enterobacteriaceae, fungi of the genus Candida) were insensitive to the diagnosticum. "Diastaph" permits not only the rapid identification of staphylococci pure cultures, but also the determination of their presence in association with other microbial species directly in pathological material, which makes it possible to recommend this diagnostic preparation for use in medical, veterinary and sanitary microbiology.  相似文献   

17.
Coexisting bisexual and unisexual populations of individuals belonging to the genus Heterocypris are found in ephemeral freshwater ponds on the island of Lampedusa (Pelagie Islands, Italy). Different reproductive modes were associated with a peculiar morphological trait: a lamella hyalina on the posterior margin of the left valve was observed in amphimictic females, a feature missing in apomictic females. In order to clarify the phylogenetic relationships among taxa with different morphological traits and reproductive modes, we used four polymorphic enzyme loci (GPI, ICD2, MPI and PGM) and mitochondrial DNA 16S ribosomal sequences. We identified three main evolutionary units that showed a combination of morphological and reproductive characteristics: (1) amphimictic females of H. barbara with a lamella hyalina, according to the typical feature of the species, and apomictic females of H. barbara without lamella that are sympatric in one temporary pond; (2) apomictic females of H. incongruens without a lamella, as typical of the species; (3) apomictic females without a lamella, living in sympatry with H. barbara, but characterised by a high genetic diversity from both H. incongruens and H. barbara. We discuss the possible origin of apomictic lineages as a result of independent transition episodes to apomixis from different sexual ancestors. Time of divergence reflected the genetic differentiation within and among multiple ancestors and different possible routes to parthenogenesis.  相似文献   

18.
Many ascomycetes are associated with insects to form symbioses. The fungi are necrotrophic and biotrophic parasites, endosymbionts, insect-dispersed forms, and other obligate associates that provide nourishment for insects. Diversity among these fungi can be categorized in several different ways: taxonomic diversity, variety of interaction types occurring within a fungal lineage, and number of fungal species. Previously our inability to produce well supported phylogenetic hypotheses has obscured these views of diversity. Over the past 5 years our knowledge of insect-associated fungi has been improved by the use of DNA sequence analysis. Such studies have revealed that ascomycetes in almost all major clades are associated intimately with insects. Of particular interest has been the sorting out of relationships of taxa with convergent morphologies, unique characters, and lost characters, including those associated with sexual reproduction. Within some fungal groups the types of interactions with insects are diverse, and eventually phylogenetic analysis will help to trace the evolutionary development of symbioses. Molecular studies also contribute to our understanding of the number of species which may vary according to species concepts used in their study.  相似文献   

19.
Despite increasing threats to the marine environment, only a fraction of the biodiversity of the oceans has been described, owing in part to the widespread occurrence of cryptic species. DNA-based barcoding through screening of an orthologous reference gene has been proposed as a powerful tool to uncover biological diversity in the face of dwindling taxonomic expertise and the limitations of traditional species identification. Although DNA barcoding should be particularly useful in the sea, given the prevalence of marine cryptic species, the link between taxa identified through DNA barcodes and reproductively isolated taxa (biological species) has rarely been explicitly tested. Here, we use an integrated framework comparing breeding compatibility, morphology and mitochondrial (cytochrome c oxidase 1) and nuclear (elongation factor-1-alpha) DNA sequence variation among globally distributed samples of the cosmopolitan marine bryozoan Celleporella hyalina (L.). Our results reveal that C. hyalina comprises numerous deep, mostly allopatric, genetic lineages that are reproductively isolated, yet share very similar morphology, indicating rampant cryptic speciation. The close correspondence between genetic lineages and reproductively isolated taxa in the context of minimal morphological change suggests that DNA barcoding will play a leading role in uncovering the hidden biodiversity of the oceans and that the sole use of morphologically based taxonomy would grossly underestimate the number of marine species.  相似文献   

20.
Lichenicolous fungi are obligately lichen-associated organisms that have evolved many times throughout the Ascomycota and Basidiomycota. Approximately 20% of lichenicolous ascomycetes are recognized only from asexual (anamorphic) characteristics, so the phylogenetic position of many groups has never been resolved. Here we present the first molecular phylogeny of Lichenoconium, a genus of strictly asexual, obligately lichenicolous species with broad geographic distributions and diverse host ecologies. We obtained nuclear and mitochondrial rDNA sequences from fungal cultures isolated from four species in the genus, including a new species, Lichenoconium aeruginosum sp. nov., collected in France, Luxembourg and Netherlands. Our multilocus phylogeny supports the monophyly of fungi in the genus Lichenoconium, and places the genus in the Dothideomycetes, an ascomycete class made up mainly of saprobes and plant-associated endophytes and pathogens. There are only a few recognized groups of lichen-formers in the Dothideomycetes, but Lichenoconium is not supported as being closely related to any of these, nor to any other recognized order within the Dothideomycetes. Given that Lichenoconium is but one of over 100 genera of anamorphic lichenicolous fungi, most of which have never been studied phylogenetically, we suggest that asexual lichenicolous fungi may represent novel and evolutionarily significant phylogenetic groups in the Kingdom Fungi.  相似文献   

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