Saved from extinction? Establishment and dispersal of Mercury Islands tusked weta,Motuweta isolata,following translocation onto mammal-free islands

The Mercury Islands tusked weta, Motuweta isolata (Orthoptera: Anostostomatidae), survived only on 13 ha Ahu or Middle Island, a mammal-free island in the Mercury Group, New Zealand. Between 2000 and 2009, 567 individuals were translocated in nine releases to six nearby islands from which mammals had been removed. These translocations occurred to reduce the chance of accidental extinction of the Middle Island population of only a few hundred adults and to contribute to the restoration of the other islands. All translocated insects originated from the captive-bred progeny of one male and two females collected from Middle Island between 1998 and 2001. Their establishment on Double and Red Mercury Islands, after their releases in 2000 and 2001 respectively, was confirmed by searching plots, and by using footprint tracking tunnels on Red Mercury Island between 2008 and 2012. Tracking tunnels provided better data and proved more cost effective than searching plots for detecting large tusked weta. Tracking tunnels demonstrated that the population on Red Mercury expanded outwards from the release sites by 50–100 m each year between 2009 and 2012. These weta are now estimated to be present over more than half the Island. Tusked weta have also survived on Stanley, Korapuki and Ohinau Islands after releases in 2007, but they remain within 100 m of the release sites. No confirmed progeny of the weta released on Cuvier Island in 2008 and 2011 were detected. No tusked weta were detected on Middle Island using tracking tunnels on eight occasions between 2009 and 2012, suggesting this species is likely to be locally extinct. Despite possible failure on one island, these translocations have resulted in a significant conservation success outcome.     

Micro‐ or macroscale? Which one best predicts the establishment of an endemic Atlantic Forest palm?

Historically, macroecology and microecology have diverged with regard to the niche concept. A better understanding of functioning ecological systems, however, depends on an integrative approach to this concept at different spatial scales. A mixed approach, merging macro‐ and microscale by validating ecological niche modeling (ENM) with the results of in situ experiments and environmental data collection was used to understand if areas identified by ENM as highly suitable for adult palms are also adequate for seedling establishment. Syagrus weddelliana's (Arecaceae) distribution range falls within the Atlantic Rain Forest, and more specifically Serra dos Órgãos region (Rio de Janeiro state), southeastern Brazil. The following steps were performed: (a) ENM to delimit the area of occurrence of S. weddelliana and locate experimental areas; (b) a seed sowing experiment in areas with presence or absence of the species in areas of high or low environmental suitability at 36 experimental stations; and (c) characterization of each microhabitat which was related back to the macroscale results of ENM. Evidence of biotic and abiotic limitations was found for S. weddelliana distribution. Areas of higher suitability had lower seed predation rates and, consequently, higher seed germination rates. On the other hand, areas with low environmental suitability at the macroscale were divided into two types: areas with microhabitat similar to that of areas with high environmental suitability that had some germination despite high predation and areas with different environmental conditions that had no germination and high predation rates. Seedlings and adults had different abiotic requirements. Microhabitat conditions were more important for the initial establishment of S. weddelliana than macroclimatic variables. This finding demonstrates that macro‐ and microecological information works in a complementary way to a better understanding of the distribution of S. weddelliana.     

Colonization history, ecological shifts and diversification in the evolution of endemic Galápagos weevils

Mitochondrial DNA sequence data were obtained for eight species of flightless Galapaganus endemic weevils and one winged close relative in order to study their colonization history and modes of diversification in the Galápagos Archipelago. Contrary to most other insular radiations, the phylogeny estimates we recovered for Galapaganus do not follow the progression rule of island biogeography. The penalized likelihood age estimates of colonization of the archipelago exceed the age of the emerged islands and underscore the potential role of now sunken seamounts for the early evolution of Galapaganus . The phylogeny proposes one intra-island origin for Galapaganus endemics, but monophyly tests suggest a larger contribution of in-situ speciation on older islands. Generalist habitat preferences were reconstructed as ancestral while shifts to highland habitats were reconstructed as having evolved independently on different islands. Magnitudes and patterns of diversification rate were found to differ between older and younger islands. Our analyses reveal that the colonization sequence of islands and timing of colonization of Galapaganus could be linked with the geological and volcanic history of the islands in a rather complex scenario. Even though most islands appear to have been colonized soon after their emergence, there are notable deviations from the pattern of sequential colonization expected under the progression rule when considering only the extant emerged islands. Patterns of diversification rate variation on older and younger islands correspond to the volcanic activity or remnants of such activity, while the pattern of independent evolution of restricted habitat preferences in different islands suggests that habitat shifts could also have contributed to species diversity in Galapaganus .     

What Do Pneumocystis Organisms Tell Us about the Phylogeography of Their Hosts? The Case of the Woodmouse Apodemus sylvaticus in Continental Europe and Western Mediterranean Islands

Pneumocystis fungi represent a highly diversified biological group with numerous species, which display a strong host-specificity suggesting a long co-speciation process. In the present study, the presence and genetic diversity of Pneumocystis organisms was investigated in 203 lung samples from woodmice (Apodemus sylvaticus) collected on western continental Europe and Mediterranean islands. The presence of Pneumocystis DNA was assessed by nested PCR at both large and small mitochondrial subunit (mtLSU and mtSSU) rRNA loci. Direct sequencing of nested PCR products demonstrated a very high variability among woodmouse-derived Pneumocystis organisms with a total number of 30 distinct combined mtLSU and mtSSU sequence types. However, the genetic divergence among these sequence types was very low (up to 3.87%) and the presence of several Pneumocystis species within Apodemus sylvaticus was considered unlikely. The analysis of the genetic structure of woodmouse-derived Pneumocystis revealed two distinct groups. The first one comprised Pneumocystis from woodmice collected in continental Spain, France and Balearic islands. The second one included Pneumocystis from woodmice collected in continental Italy, Corsica and Sicily. These two genetic groups were in accordance with the two lineages currently described within the host species Apodemus sylvaticus. Pneumocystis organisms are emerging as powerful tools for phylogeographic studies in mammals.     

Migration of red‐backed shrikes from the Iberian Peninsula: optimal or sub‐optimal detour?

The current Northern Hemisphere migration systems are believed to have arisen since the last glaciation. In many cases, birds do not migrate strait from breeding to non‐breeding areas but fly via a detour. All western European populations of red‐backed shrikes Lanius collurio are assumed to reach their southern African wintering grounds detouring via southeast Europe. Based on theoretical considerations under an optimality framework this detour is apparently optimal. Here, we use individual geolocator data on red‐backed shrikes breeding in Spain to show that these birds do indeed detour via southeast Europe en route to southern Africa where they join other European populations of red‐backed shrikes and return via a similar route in spring. Disregarding potential wind assistance, the routes taken for the tracked birds in autumn were not optimal compared to crossing the barrier directly. For spring migration the situation was quite different with the detour apparently being optimal. However, when considering potential wind assistance estimated total air distances during autumn migration were overall similar and the barrier crossing shorter along the observed routes. We conclude that considering the potential benefit of wind assistance makes the route via southeast Europe likely to be less risky in autumn. However, it cannot be ruled out that other factors, such as following a historical colonisation route could still be important.     

Who flies first? – habitat‐specific phenological shifts of butterflies and orthopterans in the light of climate change: a case study from the south‐east Mediterranean

1. Insects undergo phenological change at different rates, showing no consistent trend between habitats, time periods, species or groups. Understanding how and why this variability occurs is crucial. 2. Phenological patterns of butterflies and Orthoptera were analysed using a novel approach of standardised major axis (SMA) analysis. It was investigated whether: (i) phenology (the mean date and duration of flight) of butterflies and Orthoptera changed from one survey (1998 and 1999 respectively) to another (2011), (ii) the rate at which phenology changed differed between taxa and (iii) phenological change was significantly different across habitat types (agriculture fields, grasslands, and forests). Using the 2011 dataset, we investigated relationships between habitat‐specific variables and species phenology. 3. For both groups, late‐emerging species had an advanced onset on the second survey while the duration showed no consistent trend for butterflies and did not change for Orthoptera. Although the rate at which phenology changed was consistent between the two groups, at the habitat level, a longer duration of flight period emerged for butterflies in agriculture fields while Orthoptera showed no differentiation in flight duration between habitats. We found an earlier emergence of butterflies in grasslands compared to forests, attributed to habitat‐specific temperature, whereas spatial variation in humidity had a significantly lower effect on butterflies' phenology in grasslands compared to forests. A gradual delay of butterfly appearances as the canopy cover increased was also found. 4. The utility of SMA analysis was demonstrated in phenological studies and evidence was detected that both habitat type and habitat‐specific variables refine species' phenological responses.     

Variation in distribution and abundance of the endemic flora of Juan Fernández Islands, Chile. Pteridophyta

The Juan Fernández Archipelago is located 667 km west of central Chile (33°S) in the Pacific Ocean. It is composed of three islands: Robinson Crusoe (ex-Masatierra), Santa Clara and Marinero Alejandro Selkirk (ex-Masafuera).The first botanical collections were made 250 years after its discovery and colonization. These studies showed the great importance of ferns in the vascular flora of the islands. Of the 53 species described up to the present, 23 are endemic (45%), with one endemic monotypic genus, Thyrsopteris, whose only species is T. elegans Kunze (Dicksoniaceae).During a period of 4 years, I have studied the flora of the islands. There has been surprisingly little change in the distribution of the ferns, considering the devastation of the angiosperm flora. Some species have even increased their abundance, especially the tree ferns. Nevertheless, the more delicate species and those with a more restricted habitat have been reduced in abundance.Ten of the endemic species (43%) are in danger of extinction, such as Asplenium macrosorum and Ophioglossum fernandezianum, four are vulnerable (17%), including Blechnum schottii and Polypodium intermedium, and nine (40%), including Pteris berteroana and Blechnum cycadifolium are not endangered.     

Origin and diversification of the Greater Cape flora: ancient species repository, hot-bed of recent radiation, or both?

Like island-endemic taxa, whose origins are expected to postdate the appearance of the islands on which they occur, biome-endemic taxa should be younger than the biomes to which they are endemic. Accordingly, the ages of biome-endemic lineages may offer insights into biome history. In this study, we used the ages of multiple lineages to explore the origin and diversification of two southern African biomes whose remarkable floristic richness and endemism has identified them as global biodiversity hotspots (succulent karoo and fynbos). We used parsimony optimization to identify succulent karoo- and fynbos-endemic lineages across 17 groups of plants, for which dated phylogenies had been inferred using a relaxed Bayesian (BEAST) approach. All succulent karoo-endemic lineages were less than 17.5 My old, the majority being younger than 10 My. This is largely consistent with suggestions that this biome is the product of recent radiation, probably triggered by climatic deterioration since the late Miocene. In contrast, fynbos-endemic lineages showed a broader age distribution, with some lineages originating in the Oligocene, but most being more recent. Also, in groups having both succulent karoo- and fynbos-endemic lineages, there was a tendency for the latter to be older. These patterns reflect the greater antiquity of fynbos, but also indicate considerable recent speciation, probably through a combination of climatically-induced refugium fragmentation and adaptive radiation.     

Deep-sea endemic fungi? The discovery of Alisea longicolla from artificially immersed wood in deep sea off the Nansei Islands,Japan

We report the discovery of the deep-sea fungus, Alisea longicolla on a wood log artificially immersed at 495 m depths in deep sea, off the Nansei Islands, Japan. Three different species of wood logs, whale bones and coconuts were deployed at approximate depths of 250, 500, 1000, 2000, 3000 and 5000 m. Densely colonised A. longicolla was found on the Ubame oak (Quercus phillyraeoides) wood log from the 500 m deployment site, which was collected 1302 d (about 3 y and 7 mo) after the deployment. Alisea longicolla was originally described as a new genus of deep-sea ascomycete within the family Halosphaeriaceae, associated with sunken wood collected in 630–791 m water depths off the Vanuatu Islands. Our results provide further evidence to support that A. longicolla may be an endemic deep-sea fungus, and it grows slowly but is active and reproductive in deep-sea environments. The occurrence of obligate deep-sea fungi appears to be very rare in the environments and few data is available. Further investigation on A. longicolla will extend our understanding of the ecology, physiology and evolution of deep-sea fungi.     

Origin and Diet of the Prehistoric Hunter-Gatherers on the Mediterranean Island of Favignana (ègadi Islands,Sicily)

Hunter-gatherers living in Europe during the transition from the late Pleistocene to the Holocene intensified food acquisition by broadening the range of resources exploited to include marine taxa. However, little is known on the nature of this dietary change in the Mediterranean Basin. A key area to investigate this issue is the archipelago of the Ègadi Islands, most of which were connected to Sicily until the early Holocene. The site of Grotta d’Oriente, on the present-day island of Favignana, was occupied by hunter-gatherers when Postglacial environmental changes were taking place (14,000-7,500 cal BP). Here we present the results of AMS radiocarbon dating, palaeogenetic and isotopic analyses undertaken on skeletal remains of the humans buried at Grotta d’Oriente. Analyses of the mitochondrial hypervariable first region of individual Oriente B, which belongs to the HV-1 haplogroup, suggest for the first time on genetic grounds that humans living in Sicily during the early Holocene could have originated from groups that migrated from the Italian Peninsula around the Last Glacial Maximum. Carbon and nitrogen isotope analyses show that the Upper Palaeolithic and Mesolithic hunter-gatherers of Favignana consumed almost exclusively protein from terrestrial game and that there was only a slight increase in marine food consumption from the late Pleistocene to the early Holocene. This dietary change was similar in scale to that at sites on mainland Sicily and in the rest of the Mediterranean, suggesting that the hunter-gatherers of Grotta d’Oriente did not modify their subsistence strategies specifically to adapt to the progressive isolation of Favignana. The limited development of technologies for intensively exploiting marine resources was probably a consequence both of Mediterranean oligotrophy and of the small effective population size of these increasingly isolated human groups, which made innovation less likely and prevented transmission of fitness-enhancing adaptations.     

Cloning,expression and purification of the α-carbonic anhydrase from the mantle of the Mediterranean mussel,Mytilus galloprovincialis

We cloned, expressed, purified, and determined the kinetic constants of the recombinant α-carbonic anhydrase (rec-MgaCA) identified in the mantle tissue of the bivalve Mediterranean mussel, Mytilus galloprovincialis. In metazoans, the α-CA family is largely represented and plays a pivotal role in the deposition of calcium carbonate biominerals. Our results demonstrated that rec-MgaCA was a monomer with an apparent molecular weight of about 32?kDa. Moreover, the determined kinetic parameters for the CO₂ hydration reaction were k_cat?=??4.2?×?10⁵?s^?1 and k_cat/K_m of 3.5?×?10⁷?M^?1 ×s^?1. Curiously, the rec-MgaCA showed a very similar kinetic and acetazolamide inhibition features when compared to those of the native enzyme (MgaCA), which has a molecular weight of 50?kDa. Analysing the SDS-PAGE, the protonography, and the kinetic analysis performed on the native and recombinant enzyme, we hypothesised that probably the native MgaCA is a multidomain protein with a single CA domain at the N-terminus of the protein. This hypothesis is corroborated by the existence in mollusks of multidomain proteins with a hydratase activity. Among these proteins, nacrein is an example of α-CA multidomain proteins characterised by a single CA domain at the N-terminus part of the entire protein.     

Molecular differentiation within and among island populations of the endemic plant Scalesia affinis (Asteraceae) from the Galápagos Islands

Molecular variance was estimated in seven populations of the endemic species Scalesia affinis within and among islands of the Galapagos. The analysis, based on 157 polymorphic AFLP markers, revealed a high differentiation among populations, of which most was partitioned among islands. In addition, the information content of AFLP markers was tested with sets of discriminant analyses based on different numbers of AFLP markers. This indicated that the markers were highly informative in discriminating the populations. Although one of four populations from the island Isabela was sampled from a volcano 100 km away from the remaining populations, this population resembled the others on Isabela. The partitioning of molecular variance (AFLP) resulted in two unities, one consisting of populations from Isabela and one of populations from Santa Cruz and Floreana. The differentiation in two chloroplast microsatellites was higher than for AFLP markers and equally partitioned among populations within islands as among islands. Thus, gene flow via fruits within islands is as limited as among islands. The lower differentiation within islands in the nuclear AFLP markers may thus indicate that gene flow within islands is mostly accounted for by pollen transfer. S. affinis is the only species in the genus that is not listed in 2000 IUCN Red List of Threatened Species. However, due to prominent grazing and land exploitation, some populations have recently been reduced markedly, which was reflected in lower diversity. As inbreeding depression is present in the species, the rapid bottlenecks are threats to the populations.     

To speciate,or not to speciate? Resource heterogeneity,the subjectivity of similarity,and the macroevolutionary consequences of niche‐width shifts in plant‐feeding insects

Coevolutionary studies on plants and plant‐feeding insects have significantly improved our understanding of the role of niche shifts in the generation of new species. Evolving plant lineages essentially constitute moving islands and archipelagoes in resource space, and host shifts by insects are usually preceded by colonizations of novel resources. Critical to hypotheses concerning ecological speciation is what happens immediately before and after colonization attempts: if an available plant is too similar to the current host(s), it simply will be incorporated into the existing diet, but if it is too different, it will not be colonized in the first place. It thus seems that the probability of speciation is maximized when alternative hosts are at an ‘intermediate’ distance in resource space. In this review, I wish to highlight the possibility that resource similarity and, thus, the definition of ‘intermediate’, are subjective concepts that depend on the herbivore lineage's tolerance to dietary variation. This subjectivity of similarity means that changes in tolerance can either decrease or increase speciation probabilities depending on the distribution of plants in resource space: insect lineages with narrow tolerances are likely to speciate by ‘island‐hopping’ on young, species‐rich plant groups, whereas more generalized lineages could speciate by shifting among resource archipelagoes formed by higher plant taxa. Repeated and convergent origins of traits known to broaden or to restrict host‐plant use in multiple different insect groups provide opportunities for studying how tolerance and resource heterogeneity may interact to determine speciation rates.     

Are island‐like systems biologically similar to islands? A review of the evidence

Islands are geographically defined as land masses completely surrounded by water, and island systems have been used as models for many biogeographic, ecological, and evolutionary theories ever since Darwin's pioneering efforts. However, their biological definition is complex. Over the past few decades these theories have been applied to many study systems that only share some geographic features with island systems. These features include spatial fragmentation, limited area, spatial and temporal isolation from adjacent parts of the system, and low connectivity between different parts within the system, to mention just a few. These systems vary in their form, the matrix that surrounds them, the factors defining their borders, the extent of insularity they impose on the different taxa, and their geological similarity to different types of actual islands. Here, I seek to understand whether such island‐like systems (ILS) function biologically as true islands. In the first part, I describe the wide diversity of ILS suggested in the literature and the variation in the features that define their insularity. In the second part, I review the extent to which the main theories of island biology are applicable to these systems: species–area and species–isolation relationships, community composition, evolutionary radiations, and the extent of endemism and genetic diversity. In the third and final part, I suggest a new conceptual framework within which to classify and study the biology of ILS, as well as practical future research directions. I conclude that the term ‘biological island’ is a multi‐faceted concept, loosely related to its geographical definition. As ILS are often less isolated than true islands, and their biological patterns are only partly similar to those of true islands (and even this is true only for some ILS) the use of the term ‘island’ to describe any isolated habitat is therefore inappropriate.