Autophagy and EMT in cancer and metastasis: Who controls whom?

Metastasis consists of hallmark events, including Epithelial-Mesenchymal Transition (EMT), angiogenesis, initiation of inflammatory tumor microenvironment, and malfunctions in apoptosis. Autophagy is known to play a pivotal role in the metastatic process. Autophagy has pulled researchers towards it in recent times because of its dual role in the maintenance of cancer cells. Evidence states that cells undergoing EMT need autophagy in order to survive during migration and dissemination. Additionally, it orchestrates EMT markers in certain cancers. On the other side of the coin, autophagy plays an oncosuppressive role in impeding early metastasis. This review aims to project the interrelationship between autophagy and EMT. Targeting EMT via autophagy as a useful strategy is discussed in this review. Furthermore, for the first time, we have covered the possible reciprocating roles of EMT and autophagy and its consequences in cancer metastasis.     

Who wins in the weaning process? Juvenile feeding morphology of two freshwater mussel species

The global decline of freshwater mussels can be partially attributed to their complex life cycle. Their survival from glochidium to adulthood is like a long obstacle race, with juvenile mortality as a key critical point. Mass mortality shortly after entering into a juvenile state has been reported in both wild and captive populations, thus weakening the effective bivalve population. A similar phenomenon occurs during metamorphosis in natural and hatchery populations of juvenile marine bivalves. Based on a morphological analysis using scanning electron microscopy of newly formed juveniles of the freshwater species Margaritifera margaritifera (L.) (Margaritiferidae) and Unio mancus Lamarck (Unionidae), we show that a second metamorphosis, consisting of drastic morphological changes, occurs that leads to suspension feeding in place of deposit feeding by the ciliated foot. We hypothesize that suspension feeding in these two species improves due to a gradual development of several morphological features including the contact between cilia of the inner gill posterior filaments, the inner gill reflection, the appearance of the ctenidial ventral groove and the formation of the pedal palps. Regardless of the presence of available food, a suspension feeding mode replaces deposit feeding, and juveniles unable to successfully transition morphologically or adapt to the feeding changes likely perish.     

Microbial invasion: a covert activity?

In contrast to nonpathogenic microorganisms that exist happily in biofilms on various organic and inorganic surfaces, many pathogenic microbes have the additional ability to invade host tissues by inducing their own endocytosis and transport across normally protective barriers. This phenomenon, designated "parasite-directed endocytosis," has been observed with a variety of surfaces (intestinal, genital, nasopharyngeal, and tracheal epithelium) as well as in endothelial cells. The mechanisms involved in invasion may involve a single factor as described for some species of Yersinia, or may require multiple factors as observed in Shigellae. For the majority of pathogens, the molecular mechanisms of invasion are not well understood (e.g., Neisseria gonorrhoeae). Because parasite-directed endocytosis is reminiscent of receptor-mediated endocytosis, it is quite possible that some pathogens engage in biologic mimicry by producing a molecule that resembles a natural host ligand, for which there is a host cell receptor. Such a masquerade may allow some microbes to enter the host's inner sanctum covertly in a manner analogous to the Trojan horse, rather than overtly by destroying the mucosa and entering host tissues directly. Whereas this hypothesis is speculative at present, bacteria that produce molecules resembling insulin, calmodulin, and chorionic gonadotropin have been described.     

Lake Superior: an invasion coldspot?

Lake Superior receives a disproportionate number of ballast water discharges from transoceanic ships operating on the Laurentian Great Lakes. Although this provides dispersal opportunities for nonindigenous species (NIS), relatively few NIS were initially discovered in this lake prior to being recorded elsewhere in the basin. A lack of NIS records from this lake may be an artefact of sampling bias. We tested this hypothesis by sampling benthos and plankton from littoral and deepwater habitats around the perimeter of Lake Superior during June and August 2001. Using morphological analysis techniques, we identified a total of 230 invertebrate taxa representing planktonic, benthic and nektonic lifestyles. Five species with invasion histories in the lower Great Lakes, the bivalves Sphaerium corneum, Pisidium amnicum and P. moitessierianum, gastropod Potamopyrgus antipodarum and amphipod Echinogammarus ischnus, were identified for the first time in Lake Superior. In addition, records of expanded distributions within this lake are presented for the amphipod Gammarus fasciatus and oligochaetes Ripistes parasita and Vejdovskyella intermedia. Recently introduced NIS in Lake Superior were found near international ports, implicating shipping as the vector of their introduction. Intrinsic physical-chemical aspects of Lake Superior may account for the scarcity of NIS in this lake as compared to the lower Great Lakes.     

DNA packaging in bacteriophage: is twist important?

We study the packaging of DNA into a bacteriophage capsid using computer simulation, specifically focusing on the potential impact of twist on the final packaged conformation. We perform two dynamic simulations of packaging a polymer chain into a spherical confinement: one where the chain end is rotated as it is fed, and one where the chain is fed without end rotation. The final packaged conformation exhibits distinct differences in these two cases: the packaged conformation from feeding with rotation exhibits a spool-like character that is consistent with experimental and previous theoretical work, whereas feeding without rotation results in a folded conformation inconsistent with a spool conformation. The chain segment density shows a layered structure, which is more pronounced for packaging with rotation. However, in both cases, the conformation is marked by frequent jumps of the polymer chain from layer to layer, potentially influencing the ability to disentangle during subsequent ejection. Ejection simulations with and without Brownian forces show that Brownian forces are necessary to achieve complete ejection of the polymer chain in the absence of external forces.     

Rac and Rho driving tumor invasion: who's at the wheel?

Genome-wide analysis of regulators of Rho-family small GTPases has identified critical elements that control the morphology and invasive behavior of melanoma cells.     

Sex allocation conflict in insect societies: who wins?

Sex allocation in colonies of eusocial Hymenoptera is one of the best studied social conflicts. We outline a framework for analysing conflict outcome through power and the costs of manipulation and suggest that the conflict will often be unresolved because both major parties of interest, the queen and the workers, should manipulate allocation even at considerable costs to the colony. We suggest future work for analysing power in the conflict between queen and workers over sex allocation and discuss the extent of male power.     

Are urban systems beneficial,detrimental, or indifferent for biological invasion?

Urban environments are often seen as unique or degraded habitats that both present hardships for some sensitive species and provide opportunities to others. Non-indigenous species (NIS) are commonly referenced in the latter group, and are comprised of species that can tolerate the unique conditions or capitalize on the opportunities found in urban environments. Moreover, these urban beneficiaries may be those that normally cannot overcome competitive interactions in intact native communities, but find opportunity to flourish in urban habitats. We ask the question: do NIS benefit from urbanization? We answer this question using three strategies. First, we explore the problem conceptually, using community assembly theory. Second, we perform a broad literature review. Finally, we analyze studies with sufficient information using a meta-analysis. We show that the available evidence supports the proposition that NIS benefit from urbanization, with NIS obtaining higher abundances and greater diversity in more urbanized habitats. There were only 43 studies that measured NIS abundance and diversity while adequately quantifying the degree of urbanization surrounding plots, and effect sizes (measured by Hedge’s D) reveal that NIS obtain higher abundances in more urbanized habitats, and especially for invertebrates. Despite the intense interest in NIS dynamics and impacts, we note a general dearth of robust studies that adequately quantify ‘urbanization’, and we end with a general call for more detailed research.     

Ribosome biogenesis and p53: Who is regulating whom?

Comment on: Krastev DB, et al. Nat Cell Biol 2011; 13:809-18.     

Oscillations and chaos behind predator-prey invasion: mathematical artifact or ecological reality?

A constant dilemma in theoretical ecology is knowing whether model predictions corrspond to real phenomena or whether they are artifacts of the modelling framework. The frequent absence of detailed ecological data against which models can be tested gives this issue particular importance. We address this question in the specific case of invasion in a predator-prey system with oscillatory population kinetics, in which both species exhibit local random movement. Given only these two basic qualitative features, we consider whether we can deduce any properties of the behaviour following invasion. To do this we study four different types of mathematical model, which have no formal relationship, but which all reflect our two qualitative ingredients. The models are: reaction-diffusion equations, coupled map lattices, deterministic cellular automata, and integrodifference equations. We present results of numerical simulations of the invasion of prey by predators for each model, and show that although there are certain differences, the main qualitative features of the behaviour behind invasion are the same for all the models. Specifically, there are either irregular spatiotemporal oscillations behind the invasion, or regular spatiotemporal oscillations with the form of a periodic travelling ''wake'', depending on parameter values. The observation of this behaviour in all types of model strongly suggests that it is a direct consequence of our basic qualitative assumptions, and as such is an ecological reality which will always occur behind invasion in actual oscillatory predator-prey systems.     

Aquatic systems: maintaining, mixing and mobilising antimicrobial resistance?

Bacteria showing antimicrobial resistance (AMR) pose a significant global healthcare problem. Although many mechanisms conferring AMR are understood, the ecological processes facilitating its persistence and spread are less well characterised. Aquatic systems represent an important milieu for the environmental release, mixing, persistence and spread of AMR bacteria and resistance genes associated with horizontally transferable genetic elements. Additionally, owing to the use and discharge of antimicrobials and biocides, and the accumulation and abundance of other pollutants, mechanisms that confer AMR might evolve in aquatic systems. In this review, we hypothesise that aquatic systems have an important ecological and evolutionary role in driving the persistence, emergence and spread of AMR, which could have consequences when attempting to reduce its occurrence in clinical settings.     

Genomics and policymaking: from static models to complex systems?

In the 20 years following the launching of the Human Genome Project, socio-ethical and legal responses to the policy issues raised have varied across jurisdictions. There seems, however, to be a move away from the more static, classical responses that characterized the first decade to a more epigenetic and complex one. The latter policy approach better reflects the dynamic nature of the science itself.