New records of benthic marine algae and Cyanobacteria for Costa Rica,and a comparison with other Central American countries

We present the results of an intensive sampling program carried out from 2000 to 2007 along both coasts of Costa Rica, Central America. The presence of 44 species of benthic marine algae is reported for the first time for Costa Rica. Most of the new records are Rhodophyta (27 spp.), followed by Chlorophyta (15 spp.), and Heterokontophyta, Phaeophycea (2 spp.). Overall, the currently known marine flora of Costa Rica is comprised of 446 benthic marine algae and 24 Cyanobacteria. This species number is an under estimation, and will increase when species of benthic marine algae from taxonomic groups where only limited information is available (e.g., microfilamentous benthic marine algae, Cyanobacteria) are included. The Caribbean coast harbors considerably more benthic marine algae (318 spp.) than the Pacific coast (190 spp.); such a trend has been observed in all neighboring countries. Compared to other Central American countries, Costa Rica has the highest number of reported benthic marine algae; however, Panama may have a similarly high diversity after unpublished results from a Rhodophyta survey (Wysor, unpublished) are included. Sixty-two species have been found along both the Pacific and Caribbean coasts of Costa Rica; we discuss this result in relation to the emergence of the Central American Isthmus.     

Marine green algae (Chlorophyta) from the north coast of Papua New Guinea

The marine benthic green algae of the north coast of Papua New Guinea (mainly from Madang province) are documented, based on collections made by the first author between 1980 and 1990. All records (118 taxa) are listed with bibliographic, taxonomic, nomenclatural and biogeographical notes. Identification keys are added for genera represented by at least two species. Representatives of the Pseudocodiaceae and some Udoteaceae are illustrated. The green algal flora of the north coast appears to be much richer than that of the south coast where 72 taxa, including 19 unchecked records from literature, are recorded from the Port Moresby area.     

Coralline algae (Rhodophyta) in a changing world: integrating ecological,physiological, and geochemical responses to global change

Coralline algae are globally distributed benthic primary producers that secrete calcium carbonate skeletons. In the context of ocean acidification, they have received much recent attention due to the potential vulnerability of their high‐Mg calcite skeletons and their many important ecological roles. Herein, we summarize what is known about coralline algal ecology and physiology, providing context to understand their responses to global climate change. We review the impacts of these changes, including ocean acidification, rising temperatures, and pollution, on coralline algal growth and calcification. We also assess the ongoing use of coralline algae as marine climate proxies via calibration of skeletal morphology and geochemistry to environmental conditions. Finally, we indicate critical gaps in our understanding of coralline algal calcification and physiology and highlight key areas for future research. These include analytical areas that recently have become more accessible, such as resolving phylogenetic relationships at all taxonomic ranks, elucidating the genes regulating algal photosynthesis and calcification, and calibrating skeletal geochemical metrics, as well as research directions that are broadly applicable to global change ecology, such as the importance of community‐scale and long‐term experiments in stress response.     

Fatty acid composition of ten marine algae from australian waters

Detailed fatty acid analyses are reported for ten benthic algae from Australian waters of which the data for Cladophora fascicularis (Chlorophyta); Polysiphonia pungens, Porphyra sp., Centroceras clavatum (Rhodophyta); Hormosira banksii, Ralfsia sp., and Dictyota dichomota (Phaeophyta) are presented for the first time. The analyses report the exact molecular structure of component acids which is essential for taxonomic and food chain studies. The acid 16:4ω3 could be taxonomically distinguishing for species of the Chlorophyta. The occurrence of cis-vaccenic acid (18:1ω7) in the algae reported here suggests a distribution in marine benthic algae which is wider than hitherto realised, with particular taxonomic importance for Chlorophyta species in which it occurs in high levels. Corallina officinalis was found to contain the non-methylene interrupted acids 20:2 and 22:2.     

Some advances in the study of lichens since the time of E. M. Holmes

Some of the principal advances in our knowledge of lichens made since the time of E. M. Holmes are briefly reviewed. Floristic studies on British lichens have continued and distribution maps of particular species are now being produced. These studies have shown that many species have disappeared from areas affected by air pollution by sulphur dioxide. Lichen taxonomy has seen the acceptance of chemical characters as valid taxonomic criteria, and the realization that ascus types, ascocarp structure and ascocarp ontogeny are more important at the generic level than ascospore characters alone. Lichens are not now thought of as a single taxonomic group but as fungi related to various orders of non-lichenized Ascomycotina, united only in their common method of nutrition (symbiosis with algae); some lichenized and non-lichenized species with identical types of ascocarps are consequently being treated as members of the same genus. Considerable progress has been made in describing lichen communities characteristic of particular substrates and situations and in understanding the factors which may affect the occurrence of particular species. Lichens have proved to be particularly valuable indicators of mean air pollution levels and scales for the estimation of these levels based solely on the lichen vegetation have been devised. Physiological and ultrastructural studies on lichens have progressed rapidly in the last decade. Carbohydrates have been demonstrated to move from the algal to the fungal component and the mobile carbohydrates found to differ in lichens with different genera of algae. The algal and fungal partners have been isolated and studied in pure culture. Most attempts to synthesize lichens have met with little success but in 1970 a thallus was formed from its components in culture. It is now possible to grow some lichens under controlled conditions in the laboratory and these techniques, together with transplant experiments, will clearly assume considerable importance in the investigation of taxonomic and ecological problems in the future. Little progress has been made in the study of lichen cytology or the factors affecting the establishment of lichen thalli. Lichens constitute an important part of some ecosystems and their decline due to anthropogenic influences is consequently a matter of concern for all biologists.     

EVOLUTION OF THE ANTARCTIC MARINE BENTHIC ALGAL FLORA

There are many logistic difficulties associated with studying Antarctic marine algae and, as a consequence, the taxonomic information available is far from comprehensive and any generalizations should be regarded with caution. The Antarctic marine benthic flora is characterized by a low species richness. Biogeographical characteristics of the flora are outlined. There is a high degree of endemism, possibly around 35–40%. Other major floristic elements are a group of species with a distribution extending to Tierra del Fuego and subantarctic islands, a group spread through temperate regions of the Southern Hemisphere, and a cosmopolitan group. Ecological observations show that ice has a major effect on the occurrence and distribution of algae, and ecophysiological studies indicate that Antarctic macroalgae possess various adaptations to ice, low temperatures, and strongly seasonal light conditions. Possible trends in the evolution of the Antarctic benthic marine flora, including a reduction in species richness and the origins of biogeographical links with subantarctic and temperate regions of the Southern Hemisphere, are discussed in the context of tectonic and climatic changes over the past 100 million years. A comparison is made with studies on the evolution of shallow-water marine fauna.     

Marine brown algae (Phaeophyta) from the north coast of Papua New Guinea,with a description of Dictyota magneana sp. nov.

The marine benthic brown algae of the north coast of Papua New Guinea (mainly from Madang province) are documented, based on collections made by the first author, between 1980 and 1990. All records [34 identified taxa (+Sargassum spp.)] are listed with bibliographic, taxonomic, nomenclatural and biogeographical notes. The specimens belonging to the genus Dictyota are identified according to recent species definitions. D. magneana De Clerck et Coppejans is described as new to science. Only some representatives of the genus Sargassum have been identified to species level. The phaeophycean flora of the north coast is very similar to that of the south coast (Port Moresby area); nevertheless some differences can be observed.     

Phytogeography of seaweeds of the Azores

189 species of seaweeds have been recorded for the Atlantic archipelago of the Azores (114 Rhodophyceae, 41 Phaeophyceae and 34 Chlorophyceae). Ten of these have been described as endemic algae. The taxonomic status of these “endemics” is far from clear, however. Studies on the relatedness of this seaweed flora to seaweed floras of surrounding areas using clustering methods indicate its intermediary position between the seaweed floras of the subtropical Macaronesian Islands (Canaries Madeira and Salvages) on the one side and those of the warm temperate Eurafrican coasts on the other side. The geographic position of the Azores is NW of the other Macaronesian Archipelagos and thus nearer to the American coast. The Gulf stream may easily transport seaweeds from the Carribean to the Azores. Nevertheless, the number of species of these islands in common with the American Atlantic coast is much lower than with, for example, the W. Mediterranean. Of one group of seaweeds, viz. algae with a strictly warm temperature distribution, not a single species occurs likewise on American coasts. This absence is probably explicable because of the narrow temperature range for survival of these seaweeds. Temperatures of surface waters around the Azores during pleistocene glaciations were not much lower than they are at present. Nevertheless, it can be supposed that a number of seaweeds now occurring in the Azores have become extinct during the last glaciation. Paper presented at the XIV International Botanical Congress (Berlin, 24 July–1 August, 1987), Symposium 6-15, “Biogeography of marine benthic algae”. CANCAP-project. Contributions to the zoology, botany and paleontology of the Canarian-Cape Verdean region of the North Atlantic Ocean. No. 67.     

RESOLVING EVOLUTIONARY RELATIONSHIPS AMONG THE BROWN ALGAE USING CHLOROPLAST AND NUCLEAR GENES1

The brown algae are one of the largest and most important groups of primary producers in benthic coastal marine environments. Despite their biological importance, consensus regarding their taxonomic or evolutionary relationships remains elusive. Our goal was to produce a taxon‐rich two‐gene (rbcL and LSU rDNA) phylogeny. Key species were sequenced to represent each order and family in the analyses across all 19 orders and ～40 families, including selected outgroups Schizocladiophyceae and Xanthophyceae. Our results are in sharp contrast to traditional phylogenetic concepts; the Ectocarpales are not an early diverging clade, nor do the Fucales diverge early from other brown algae. Rather, Choristocarpus is sister to the remaining brown algae. Other groups traditionally considered to have primitive features are actually recently diverged lineages, turning traditional phylogenetic concepts upside down. Additionally, our results allow for the assessment, in the broadest context, of many of the historical and more recent taxonomic changes, resulting in several emended groups along with proposals for two new orders (Onslowiales, Nemodermatales) and one new family (Phaeosiphoniellaceae).     

福建崇武沿海野生经济底栖海藻资源

福建崇武沿海有底栖海藻46种。其中野生经济底栖海藻34种(蓝藻门1种,绿藻门8种,红藻门17种,褐藻门8种)。文中对这些海藻的经济价值及资源开发利用进行阐述。     

Preliminary Study of the Benthic Marine Algae on the Northern Bohai Sea Coast

The composition, distribution and seasonal variation of the benthic marine algae in the northern Bohai Sea coast were studied. 119 species of benthic marine algae were found in the northern Bohai Sea coast. They belong respectively to Cyanophyta, Thodophyta, Phaeophyta and Chlorophyta. The study showed that the marine algae flora of the northern Bohai Sea coast belongs to warm temperate in nature with considerable subtropical composition. There were 57 species of economic algae in the northern Bohai Sea coast and 7 newly recorded species.     

Coastal Habitats as Surrogates for Taxonomic,Functional and Trophic Structures of Benthic Faunal Communities

Due to human impact, there is extensive degradation and loss of marine habitats, which calls for measures that incorporate taxonomic as well as functional and trophic aspects of biodiversity. Since such data is less easily quantifiable in nature, the use of habitats as surrogates or proxies for biodiversity is on the rise in marine conservation and management. However, there is a critical gap in knowledge of whether pre-defined habitat units adequately represent the functional and trophic structure of communities. We also lack comparisons of different measures of community structure in terms of both between- (β) and within-habitat (α) variability when accounting for species densities. Thus, we evaluated a priori defined coastal habitats as surrogates for traditional taxonomic, functional and trophic zoobenthic community structure. We focused on four habitats (bare sand, canopy-forming algae, seagrass above- and belowground), all easily delineated in nature and defined through classification systems. We analyzed uni- and multivariate data on species and trait diversity as well as stable isotope ratios of benthic macrofauna. A good fit between habitat types and taxonomic and functional structure was found, although habitats were more similar functionally. This was attributed to within-habitat heterogeneity so when habitat divisions matched the taxonomic structure, only bare sand was functionally distinct. The pre-defined habitats did not meet the variability of trophic structure, which also proved to differentiate on a smaller spatial scale. The quantification of trophic structure using species density only identified an epi- and an infaunal unit. To summarize the results we present a conceptual model illustrating the match between pre-defined habitat types and the taxonomic, functional and trophic community structure. Our results show the importance of including functional and trophic aspects more comprehensively in marine management and spatial planning.     

Depth-related patterns of meiofauna on the Indian continental shelf are conserved at reduced taxonomic resolution

Taxonomic sufficiency (TS) has been used in impact assessment studies of various pollution effects on marine benthic communities and found appropriate to identify the effects of pollution on marine communities. Cost, in terms of the expertise and time needed to identify organisms, increases with the level of taxonomic accuracy. Recently, TS has been adopted to study spatial patterns of macrobenthic community structure. In order to accept TS as a routine approach in wider benthic studies, it needs to be proved valid for various taxa and in geographically different areas. The present study investigates the value of TS in meiofaunal nematodes by analyzing an extensive data set based on samples collected from a wide geographical area covering a large depth gradient. For this study, samples were collected from every degree square of the western Indian continental shelf (7°–22°N latitudes). Our high resolution data showed that with increase in depth, nematode species richness and diversity decreased and communities showed significant variation between shallow and deeper waters. The present study tests whether lower taxonomic resolution nematode data can explain community shifts along a depth gradient in a similar way to species level data from the same data set. Meiofauna have often been neglected from benthic studies, and most attention has been given to macrofauna. This is mainly due to the difficulty in the taxonomic identification of meiofauna. The results of this study based on univariate and multivariate analyses support the use of family level data of nematodes to explain some aspects of depth variation in a similar way to species level data.     

Purification and characterization of a novel alginate lyase from the marine bacterium Cobetia sp. NAP1 isolated from brown algae

The application of marine resources, instead of fossil fuels, for biomass production is important for building a sustainable society. Seaweed is valuable as a source of marine biomass for producing biofuels such as ethanol, and can be used in various fields. Alginate is an anionic polysaccharide that forms the main component of brown algae. Various alginate lyases (e.g. exo- and endo-types and oligoalginate lyase) are generally used to degrade alginate. We herein describe a novel alginate lyase, AlgC-PL7, which belongs to the polysaccharide lyase 7 family. AlgC-PL7 was isolated from the halophilic Gram-negative bacterium Cobetia sp. NAP1 collected from the brown algae Padina arborescens Holmes. The optimal temperature and pH for AlgC-PL7 activity were 45 °C and 8, respectively. Additionally, AlgC-PL7 was thermostable and salt-tolerant, exhibited broad substrate specificity, and degraded alginate into monosaccharides. Therefore, AlgC-PL7 is a promising enzyme for the production of biofuels.     

An Inventory of Marine Benthic Macroalgae of Hainan Island,China

In this review, the results of the study of marine benthic algal flora of Hainan Island, China, during the period from 1933 to 2015 are considered. It has been found that the local floristic diversity and taxonomic composition are similar to those of macroalgae from other large islands of the Indo-Pacific, where coral reefs are the main ecosystem of the shallow-water zone. An analysis of historical (decadal) changes in the marine benthic flora of Hainan has shown the following pattern of variations in the species diversity of macroalgae since the middle of the 20th century: a decline in low-productive epilithic algae with voluminous forms of thalli and an increase in highly productive opportunistic species with filamentous, fine filamentous, and membranous forms. These historical changes are thought to be caused by human impacts: inappropriate exploitation of coral reefs and eutrophication of coastal waters due to household sewage from large cities and discharge of mariculture wastes.     

Spatio-temporal,environmental factors,and host identity shape culturable-epibiotic fungi of seaweeds in the Red Sea,Egypt

The study of fungal species diversity from marine algae is in its infancy; as now no studies have been carried out on the distribution and diversity of fungi on the surfaces of marine macroalgae where all fungal–algal interactions tend to begin. The aim of this study was to isolate and describe the culturable part of mycobiota associated with the surface of benthic marine macroalgae (epiphytic or epibiotic fungi). This is an important step in understanding their abundance, diversity and factors influencing their variability and composition. The fungal community was dominated by Ascomycetes (89%) with Eurotiales as the most abundant fungal order followed by Capnodiales, Pleosporales, and Hypocreales, while Zygomycetes was less frequent. The nature of occurrence of fungal genera on different macroalgal hosts suggests that a mix of generalists’ framework applies to fungal epiphytes of seaweeds, but the abundance of fungal taxa varied among ecological functional groups of algae, as well as macroalgal taxonomic groups, which imply host filtering. The fungal assemblages were also characterized by temporal variation with variation in temperature, pH, and salinity as the most important abiotic factors. The structure of fungal assemblages showed high beta diversity and low similarity between hosts.     

Effects of temperature on the darkness survival of marine microplanktonic algae

Thirty-seven species of marine microplanktonic algae from 10 taxonomic classes were tested for their viability in axenic culture after prolonged exposure to darkness at 2°, 10°, and 20°C. The darkness test periods were prolonged in weekly installments up to a maximum of 1 year, and viability retention (survival) was judged from the capability for resuming growth after replacement in light. The 2°C-tests showed 32% of the species reaching the limits of survival with 5–6 months of darkness exposure, but another similar percentage continued to tolerate darkness for double this period. These darkness toleration limits were considerably shorter at 20°C for the strains known to be isolated from cold marine regions, whereas the warm-water strains showed the reverse temperature effect in surviving significantly longer at 10°–20°C than at 2°C. Irrespective of temperature or algal class, the bulk of the more resistant survivors was formed by the strains qualifying as benthic types, about 70% of which tolerated 11–12 months and the rest at least 5–6 months of darkness. A few randomly chosen benthic strains extended this toleration to 3 years of darkness. It was concluded that phytoplankters retain darkness-endurance capacity determined by their ecological origin and with no obvious taxonomic correspondence. The concept of ecological races, characterized by temperature control of darkness survival, is discussed.The termdarkness-survival is used throughout this report to denote the retention of cellular viability by an algawithout growth (i.e., without significant increase in cellular mass or numbers) during exposure to darkness. Implicit in this definition is the denial of any known possibility of growth, either autotrophic requiring light or heterotrophic requiring organic-carbon, since both these agents are effectively absent in the survival cases considered here.     

A long-term comparison of the benthic algal flora of Clare Island, County Mayo, western Ireland

The marine benthic algal flora of Clare Island, off County Mayo, western shore of Ireland, was investigated; collections of intertidal and subtidal marine algae were made at 16 sites along the eastern and southern shores in the years 1990, 1993 and 2000–2002. The data and observations obtained were compared with the results of a similar survey conducted by Arthur Disbrowe Cotton in 1910–1911. Considering the results of the original survey and the new survey together, the marine algal flora of the island currently totals 293 species; 224 species were recorded by Cotton in the original survey, whereas 223 species were identified in the present study. Most species are common to the original and the new list and the main differences are easily explainable; the new survey used SCUBA diving, which allowed the collection of several subtidal species not collected in 1910, and Cotton reported several microscopic green and brown algae, usually difficult to recognise in the field, which were not rediscovered. The most remarkable differences consist in the current presence of some large intertidal brown algae (Bifurcaria bifurcata, Cystoseira foeniculacea and Cystoseira nodicaulis) that were not reported in the survey of 1910. Two algae, Codium fragile subsp. tomentosoides and Asparagopsis armata, were introduced in Europe after the original survey. At present, the benthic algal assemblages of Clare Island still have basically the same structure and distribution as in 1910 and, if compared with other coastal areas of Europe, the intertidal marine environment of Clare Island appears remarkably well conserved.     

Stable carbon isotope variability associated with taxonomic composition of lotic benthic algae

We examined the relationship between the δ¹³C and taxonomic composition of benthic algae collected from a riffle (fast current habitat) of a non‐shaded mountain stream, which is a tributary of the Kiso River, Japan. The benthic algal δ¹³C ranged from ?20.6 to ?14.2‰ and tended to be ¹³C‐depleted with increasing relative abundance of upright filamentous cyanobacteria and ¹³C‐enriched with increasing relative abundance of prostrate filamentous cyanobacteria. Using isotopic mass balance equations, the relative abundance of the dominant taxa, upright and prostrate filamentous cyanobacteria, small diatoms and others, explained 74% of δ¹³C variability. This study shows a case where the difference in taxonomic composition is a possible source of the isotopic variability of benthic algae, which is a mixture of taxa with distinct isotopic signatures.     

Marine Turtles as Sentinels of Ecosystem Health: Is Fibropapillomatosis an Indicator?

Marine turtle fibropapillomatosis (FP) is a disease primarily affecting green turtles (Chelonia mydas) that is characterized by multiple cutaneous masses. In addition, the condition has been confirmed in other species of sea turtles. The disease has a worldwide, circumtropical distribution and has been observed in all major oceans. Although reported since the late 1930s in Florida, it was not until the late 1980s that it reached epizootic proportions in several sea turtle populations. Long-term studies have shown that pelagic turtles recruiting to near shore environments are free of the disease. After exposure to these benthic ecosystems, FP manifests itself with primary growths in the corner of the eyes spreading to other epithelial tissue. One or more herpesviruses, a papillomavirus, and a retrovirus have been found associated with tumors using electron microscopy and molecular techniques; however, the primary etiological agent remains to be isolated and characterized. Field observations support that the prevalence of the disease is associated with heavily polluted coastal areas, areas of high human density, agricultural runoff, and/or biotoxin-producing algae. Marine turtles can serve as excellent sentinels of ecosystem health in these benthic environments. FP can possibly be used as an indicator but correlations with physical and chemical characteristics of water and other factors need to be made. Further research in identifying the etiologic agent and its association with other environmental variables can provide sufficient parameters to measure the health of coastal marine ecosystems, which serve not only as ecotourism spots but also as primary feeding areas for sea turtles.