Displaced and tandem duplications in the long arm of chromosome 10 in maize

Lc, an anthocyanin pigmenting factor mapping somewhat more than one unit distal to R, is borne on a chromosomal segment which is homologous with part of the R-r:standard duplicated segment. Deficiencies and tandem duplications of the R to Lc region arise from exchanges within these obliquely paired homologous segments. The deficiencies are transmitted with a high, although reduced, frequency by the male gametophyte and are homozygous viable. Yet, the R to Lc region is not duplicated either proximal to R or distal to Lc. Thus the Lc-marked segment and either the P- or the S-marked segment of R-r constitute a displaced duplication. Such an arrangement can initiate a tandem and displaced duplication cycle.———No evidence was obtained for fractionation of the compound phenotype conditioned by Lc.     

Preparation, properties and crystal structure of two isomers of R,R,S,S- and R,S,R,S-[chloro(1,3,10,12,16,19-hexaazatetracyclo[17,3,1,1,0]tetracosane)copper(II)]

Two isomers (R,S,R,S- and R,R,S,S-) of five coordinate complex [Cu(L)Cl]⁺ have been separated and characterised. These two isomers have significantly different spectrochemical and electrochemical properties. Absorption maximum of R,S,R,S-[Cu(L)Cl]⁺ shifts to longer wavelength and its reduction potential shifts to more positive direction comparing those of R,R,S,S-[Cu(L)Cl]⁺. R,S,R,S-[Cu(L)Cl]⁺ is significantly distorted to trigonal-bipyramidal structure, whereas R,R,S,S-[Cu(L)Cl]⁺ retains almost square-planar geometry. The average bond distance of Cu-N in basal plane of R,S,R,S-[Cu(L)Cl]⁺ is longer by 0.024 Å than that of R,R,S,S-[Cu(L)Cl]⁺, whereas the bond distance of Cu-Cl in former is shorter by 0.200 Å than that in latter. The isolated square-planar complexes of R,R,S,S- and R,S,R,S-[Cu(L)](ClO₄)₂ are converted to the R,R,S,S- and R,S,R,S-[Cu(L)Cl]⁺ by the addition of Cl⁻ in nitromethane solution with the rate constants, k=1.70 (±0.02) and 8.31 (±0.07) M⁻¹ s⁻¹, respectively.     

22,23-Epoxides of Sitosterol and Related 7-Oxygenated Δ5-Sterols

(22S,23S)-22,23-Epoxysitosterol, (22R,23R)-22,23-epoxysitosterol, (22S, 23S)-22,23-epoxy-7-ketositosterol, (22R,23R)-22,23-epoxy-7-ketositosterol, (22S, 23S)-22,23-epoxy-7α-hydroxysitosterol, (22S,23S)-22,23-epoxy-7β-hydroxysitosterol, and (22R, 23R)-22,23-epoxy-7β-hydroxysitosterol were synthesized. Their ¹H and ¹³C NMR and the mass spectra of their trimethylsilyl derivatives were studied.     

Structural polypeptides and products of late genes of bacteriophage Mu: Characterization and functional aspects

This paper describes the identification and functional role of late gene products of bacteriophage Mu, including an analysis of the structural proteins of the Mu virion.In vitro reconstitution of infectious phage particles has shown that four genes (E, D, I, J) control the formation of phage heads and that a cluster of eight genes (K, L, M, N, P, Q, R, S) controls the formation of phage tails.Sodium dodecyl sulphate/polyacrylamide gel electrophoresis of Mu polypeptides synthesized in Escherichia coli minicells infected by Mu phages carrying amber mutations in various late genes has resulted in the identification of the products of gene C (15.5 × 10³M_r); H (64 × 10³M_r); F (54 × 10³M_r); G (16 × 10³M_r); L (55 × 10³M_r); N (60 × 10³M_r); P (43 × 10³M_r) and S (56 × 10³M_r). Minicells infected with λpMu hybrid phages and deletion mutants of Mu were used to identify polypeptides encoded by the V-β region of the Mu genome. These are the products of genes V, W or R (41.5 × 10³M_r, and 45 × 10³M_r); U (20.5 × 10³M_r) and of genes located in the β region (24 × 10³M_r (gpgin) and 37 × 10³M_r (possibly gpmom)).Analytical separation of the proteins of the Mu virion revealed that it consists of a major head polypeptide with a molecular weight of 33 × 10³, a second head polypeptide of 54 × 10³ (gpF) and two major tail polypeptides with molecular weights of 55 × 10³ and 12.5 × 10³ (gpL and gpY, respectively). In addition, there are five minor components of the tail (including gpN, gpS and gpU) and approximately seven minor components of the head structure of the virion (including gpH).     

Synthesis and characterization of procyanidin dimers as their peracetates and octamethyl ether diacetates

Condensation of (2R,3S,4R or S)-leucocyanidin or the 5,7,3′,4′-tetramethyl ether of (2R,3^R,4S)-leucocyanidin with flavan-3-ols yielded dimeric flavanoids which were converted to their octamethyl ether diacetates, or the deca-acetates for the 2,3-trans-procyanadin series. Comparison is made of the ¹H NMR spectra of the deca-acetate and octamethyl ether diacetate derivatives which lead to useful diagnostic shift parameters characteristic of their structures. Condensations afforded a novel biflavanoid with a 3,4-cis-configuration and a triflavanoid of ‘mixed’ stereochemistry.     

Regulatory Serotype Mutations in TETRAHYMENA PYRIFORMIS, Syngen 1

A method utilizing allelic exclusion has been developed to isolate mutants of Tetrahymena pyriformis, syngen 1, in which the normal pattern of expression of mutally exclusive surface antigens is altered. Cells homozygous for the recessive mutant allele R-1^r do not express the L, H and T serotypes when grown under conditions appropriate for their expression. Rather, a new immobilization antigen, r, is expressed. Cells homozygous for the recessive mutant allele R-3^r also express the r antigen instead of H serotypes, but are normal in their expression of T antigens. Genetic analyses show that R-1 and R-3 are not closely linked, that R-1 is linked to T by 9.3 units, and that R-3 may be loosely linked to the mt locus. Different linkage values were obtained, however, when different inbred laboratory strains were used, suggesting the possible existence of crossover modifying genes. The rates of assortment of R-1^R/R-1^r and R-3^R/R-3^r heterozygotes into pure sublines expressing either H or r serotypes are close to the values observed for the differentiation of heterozygotes at other loci. The data confirm the previous observation that genetic coupling relationships are not maintained in macronuclear phenotypes and are consistent with the hypothesis that the macronucleus contains 45 assorting subunits. The assortment of the double heterozygote R-1^R/R-1^r, R-3^R/R-3^r at R_f=0.0112 suggests that the units of assortment are not individual genetic loci or chromosome fragments, but that the units may be complete genomes.     

Silver(I) derivatives with new functionalised acylpyrazolonates

Silver(I) acylpyrazolonate derivatives of formula [Ag(Q)(R₃P)]₂ and [Ag(Q)(R₃P)₂], (QH=1-phenyl-3-methyl-4-R′(CO)-pyrazol-5-one; Q^OH, R′=furane; Q^SH, R′=thiophene; R=Ph, Cy, o-tol), have been synthesised and characterised, both in the solid state and in solution. The derivatives [Ag(Q)(R₃P)]₂ contain dinuclear AgO₂NP units with the acylpyrazolonate coordinating in a bridging O,O′-Q-N fashion. The [Ag(Q)(R₃P)₂] are tetrahedral species, with the distortion from ideal geometry increasing with the bulk of the phosphine. The [Ag(Q)(R₃P)₂] derivatives are fluxional in chloroform solution when R₃P is sterically hindered (R=Cy or o-tol), dissociating partially to the [Ag(Q)(R₃P)] fragment and free R₃P. [Ag(Q^S)(Ph₃P)]₂ reacts with 1-methyl-2-mercaptoimidazole (Hmimt) affording the compound [Ag(Hmimt)(Ph₃P)(Q^S)] and [Ag(Q^O)(Ph₃P)]₂ reacts with 1-methyl-imidazole (Meim) affording the compound [Ag(Meim)(Ph₃P)(Q^O)], whereas [Ag(Q^S)(Ph₃P)]₂ reacts with 1,10-phenanthroline (phen), affording the compound [Ag(phen)(Ph₃P)](Q^S). Finally [Ag(Q^S)(Ph₃P)₂] reacts with phen producing the ionic species [Ag(phen)(Ph₃P)₂](Q^S).     

Molecular characterization of Penicillium oxalicum 6R,8R-linoleate diol synthase with new regiospecificity

Diol synthase-derived metabolites are involved in the sexual and asexual life cycles of fungi. A putative diol synthase from Penicillium oxalicum was found to convert palmitoleic acid (16:1n-7), oleic acid (18:1n-9), linoleic acid (18:2n-6), and α-linolenic acid (18:3n-3) to 6S,8R-dihydroxy-9(Z)-hexadecenoic acid, 6R,8R-dihydroxy-9(Z)-octadecenoic acid, 6R,8R-dihydroxy-9,12(Z,Z)-octadecadienoic acid, and 6S,8R-dihydroxy-9,12,15(Z,Z,Z)-octadecatrienoic acid, respectively, which were identified by liquid chromatography-tandem mass spectrometry (LC-MS/MS) and nuclear magnetic resonance (NMR) spectroscopy analyses. The specific activity and catalytic efficiency of P. oxalicum 6,8-diol synthase were the highest for 18:2n-6, indicating that the enzyme is a 6R,8R-linoleate diol synthase (6R,8R-LDS) with new regiospecificity. This is the first report of a 6R,8R-LDS. LDS is a fusion protein consisting of a dioxygenase domain at the N-terminus and a cytochrome P450/hydroperoxide isomerase (P450/HPI) domain at the C-terminus. The putative active-site residues in the C-terminal domain of P. oxalicum 6R,8R-LDS were proposed based on a substrate-docking homology model. The results of the site-directed mutagenesis within C-terminal P450 domain suggested that Asn⁸⁸⁶, Arg⁷⁰⁷, and Arg⁹³⁴, are catalytic importance and belong to the catalytic groove. Phe⁷⁹⁴ and Gln⁸⁸⁹ were found to be involved in the regiospecific rearrangement of hydroperoxide, while the F794E and Q889A variants of P. oxalicum 6,8-LDS acted as 7,8- and 8,11-LDSs, respectively. All these mutations critically affected the HPI activity of P. oxalicum 6R,8R-LDS.     

Contraselectable Streptomycin Susceptibility Determinant for Genetic Manipulation and Analysis of Helicobacter pylori

Many Helicobacter pylori genetic studies would benefit from an ability to move DNA sequences easily between strains by transformation and homologous recombination, without needing to leave a conventional drug resistance determinant at the targeted locus. Presented here is a two-gene cassette that can be selected both (i) against, due to a Campylobacter jejuni rpsL gene (dominant streptomycin susceptibility in cells also carrying an rpsL-str^r allele), and (ii) for, due to an erm gene (erythromycin resistance). This rpsL,erm cassette's utility was assessed by using it to replace four gene loci (mdaB, frxA, fur, and nikR) in four streptomycin-resistant [Str^r] strain backgrounds (derivatives of 26695, SS1, X47, and G27MA). The resultant 16 strains (phenotypically erythromycin resistant [Erm^r] and Str^s) were each transformed with wild-type genomic DNAs, and Str^r derivatives were selected. The desired Erm^s Str^r isolates were obtained at frequencies that ranged from 17 to 96% among Str^r transformants, with the Erm^s yield apparently depending on the strain background and genome location of the targeted locus. The ease of isolating unmarked transformants described here should be valuable for many H. pylori molecular genetic and evolutionary analyses.     

Absolute configuration and stereochemical analysis of 3α,6β-dibenzoyloxytropane

Both enantiomers of 3α,6β-dibenzoyloxytropane (1) have been prepared from optical active 6β-hydroxyhyoscyamines establishing their absolute configurations as (?)-(3R,6R) and (+)-(3S,6S)-dibenzoyloxytropane. Independent stereochemical confirmation was obtained by vibrational circular dichroism measurements, since bands characteristic of (3R,6R) and (3S,6S) configurations of tropanediols derivatives were observed. In addition, a chiral HPLC method was developed for determining absolute configurations of tropane-related natural substances at the microgram (μg) level. The complete ¹H NMR characterization of the scaffold of 1 is also reported.     

小麦和玉米叶片光合-蒸腾日变化耦合机理

植物叶片光合-蒸腾耦合是陆地生态系统碳-水耦合的基础.已有研究将叶片光合-蒸腾耦合笼统归因于气孔的共同控制作用,缺乏对其耦合机理的全面分析.选择华北地区大田作物冬小麦(C3)和夏玉米(C4)为研究对象,分别在小麦开花期和玉米拔节期选择典型晴天进行叶片光合蒸腾日变化观测(8:00-18:00).结果发现:1)光合速率(An)、蒸腾速率(Tr)以及光合有效辐射(PAR)、叶片表面温度(T)和气孔导度(gs)均表现出单峰日变化特征,峰值出现在正午前后;2)An-Tr具有极显著线性正相关关系(小麦和玉米的相关系数分别为0.75**和0.92**,回归直线斜率分别为1.99和3.62);3)PAR、T和gs与An和Tr有线性正相关关系;4)PAR-An与PAR-Tr、T-An与T-Tr、gs-An与gs-Tr的回归直线形态非常相似.分析认为:1)在光合-蒸腾耦合特征方面,C3作物小麦和C4作物玉米叶片光合-蒸腾都有明显的线性耦合关系,但两者的耦合关系特征存在明显差异,玉米的An-Tr线性回归斜率要明显大于小麦;2)在光合-蒸腾耦合机理方面,日变化中PAR、T和gs同时受太阳辐射调控与An、Tr发生趋向相同、形态相似且近似同步的变化,因此PAR-An与PAR-Tr、T-An与T-Tr、gs-An与gs-Tr具有形态相似的线性关系,这保证了在PAR、T和gs等调控因子发生较大变化的日变化过程中光合-蒸腾保持良好的线性耦合关系.     

Improvement of carbonyl reductase activity for the bioproduction of tert-butyl (3R,5S)-6-chloro-3,5-dihydroxyhexanoate

tert-Butyl (3R,5S)-6-chloro-3,5-dihydroxyhexanoate ((3R,5S)-CDHH) is a key chiral intermediate for the side chain synthesis of rosuvastatin. In this study, random mutagenesis, site-saturation mutagenesis and combinatorial mutagenesis methods were applied to improve the activity of a synthesized stereoselective short chain carbonyl reductase (SCR) to prepare (3R,5S)-CDHH. After screened by high-throughput screening method and high-performance liquid chromatography, mut-Phe145Met/Thr152Ser and mut-Phe145Tyr/Thr152Ser, were obtained, and the enzyme activities of mutants were improved by 1.60- and 1.91-fold compared with parent enzyme, respectively. The catalytically efficiencies (kcat/Km) of mut-Phe145Met/Thr152Ser and mut-Phe145Tyr/Thr152Ser exhibited 5.11- and 8.07-fold improvements in initial activity toward (S)-6-chloro-5-hydroxy-3-oxohexanoate ((S)-CHOH), respectively. In the asymmetric reduction, mut-Phe145Tyr/Thr152Ser catalyzed 500 g L⁻¹ of (S)-CHOH to produce (3R,5S)-CDHH with >99% yield and >99% e.e., and the highest space-time yield achieved at 752.76 mmol L⁻¹ h⁻¹ g⁻¹ wet cell weight within 8 h bioconversion. This study provides a foundation for the preparation of (3R,5S)-CDHH by carbonyl reductase.     

Pressure effects on the photochemistry of bacterial photosynthetic reaction centers from Rhodobacter sphaeroides R-26 and Rhodopseudomonas viridis

Electron-transfer reactions and triplet decay rates have been studied at pressures up to 300 MPa. In reaction centers from Rhodobacter sphaeroides R-26, high pressure hastened the electron transfers from both the primary and secondary quinones (Q_A and Q_B) to the primary electron donor bacteriochlorophyll, P. Motion of Q_A between two sites, one nearer to P and the other nearer to Q_B, could account for these pressure effects. In reaction centers from Rhodopseudomonas viridis, charge recombination was slowed by high pressure. Decay rates were also studied for the triplet state, P^R. In Rb. sphaeroides R-26 with Q_A reduced with Na₂S₂O₄, the decay was hastened by pressure. This could be explained if P^R decays through a charge-transfer triplet state, or if the decay kinetics of P^R are sensitive to the distance between P and Q_A⁻. In Rps. viridis reaction centers, and in Rb. sphaeroides reaction centers that were depleted of Q_A, the lifetime of P^R was not altered by pressure.     

Binding of R and S warfarin to hepatic microsomal cytochrome P-450

The R and S enantiomers of the anticoagulant, warfarin, are metabolized to a series of monohydroxylated products by rat hepatic cytochrome P-450. The patterns of metabolites are a function of the warfarin enantiomer used and of the induction of the microsomal enzymes by phenobarbital (PB) and 3-methylcholanthrene (MC). We have studied the binding of R and S warfarin to cytochrome P-450 by difference spectrometry to probe the heterogeneity of cytochrome P-450 and to determine the role of this heterogeneity in the production of the patterns of warfarin metabolites. Uninduced cytochrome P-450 yielded modified type II spectra with R and S warfarin with equivalent binding constants, K_s = 1.50 mM. PB-induced cytochrome P-450 yielded modified type II spectra which varied biphasically with warfarin concentration with K_s(S) = 0.24 and 0.07 mm; K_s(R) = 0.79 and 0.12 mM. MC induction and 2-allyl-2-isopropylacetamide treatment yielded microsomes markedly enriched for cytochrome P-448 which, with R warfarin, yielded a type I spectrum, K_s = 0.24 mM, and with S warfarin a modified type II spectrum with K_s = 0.11 mM. The effects of the type I compound, hexobarbital, the type II compound, imidazole, or the opposite enantiomer to that being studied on the binding spectra of R and S warfarin to the variously induced cytochromes P-450 were investigated as an aid to elucidating the mode of interaction of cytochrome P-450 with warfarin. In all cases, prior binding of R or S warfarin influenced the binding of the opposite enantiomer. We conclude from these results that R and S warfarin bind to two separate forms of PB-induced cytochrome P-450 and two separate forms of MC-induced cytochrome P-448, all of which differ from uninduced cytochrome P-450. The variety of monohydroxylated metabolites of R and S warfarin is probably a consequence of the interactions with these different forms of cytochrome P-450.     

The Photosynthetic Characteristics of Saplings of Eight Canopy Tree Species in a Disturbed Neotropical Rain Forest

Foliar gas exchange characteristics, understorey microclimate, and crown irradiation were assessed for saplings of eight canopy tree species in two plots of neotropical rain forest with different degrees of canopy opening. Species studied belonged to different putative guilds: shade intolerants (both short-lived--pioneers--and long-lived), intermediates, and shade-tolerants. A considerable overlap was recorded between species in values of the photosynthetic rate per unit leaf area (P_N). The highest median P_N (1.26 μmol m^-2 s^-1) was recorded in the pioneer Croton killipianus, while slightly lower median values were recorded in Simarouba amara and Pentaclethra macroloba, and markedly lower values in two species of Vochysiaceae (Qualea paraense and Vochysia ferruginea), both putative intolerants. Highest median stomatal conductance (g_s) was also shown by C. killipianus, while S. amara, P. macroloba, and L. procera exhibited intermediate values, and the lowest g_s was shown by V. ferruginea and Q. paraense. Overall irradiance and crown irradiation, P_N, and g_s of saplings were higher in the plot which had previously received a silvicultural treatment. Most values of photosynthetic photon flux density (PPFD) were <100 μmol m^-2 s^-1 in both plots, with shortlived peaks of up to 2000 μmol m^-2 s^-1 in the treated plot. When the relationship between P_N and irradiance (I) was examined by fitting P_N/I curves, the degree of fit varied markedly between species, values of the regression coefficient r² were between 0.09 and 0.51. No significant differences between species were recorded in P_max and species also demonstrated little variation in the predicted values of dark respiration (R_D), values varying between -0.51 and -1.46 μmol m^-2 s^-1 in Q. paraense and Minquartia guianensis, respectively. Fitted values of apparent quantum efficiency were also fairly uniform, generally falling within the range 0.02-0.03 mol(CO₂) mol^-1(photon). This revised version was published online in June 2006 with corrections to the Cover Date.     

Experimental and simulated light responses of photosynthesis in leaves of three tree species under different soil water conditions

Water deficit is one of the major limiting factors in vegetation recovery and restoration in loess, hilly-gully regions of China. The light responses of photosynthesis in leaves of two-year old Prunus sibirica L., Hippophae rhamnoides L., and Pinus tabulaeformis Carr. under various soil water contents were studied using the CIRAS-2 portable photosynthesis system. Light-response curves and photosynthetic parameters were analyzed and fitted using the rectangular hyperbola model, the exponential model, the nonrectangular hyperbola model, and the modified rectangular hyperbola model. Under high light, photosynthetic rate (P _N) and stomatal conductance (g _s) were steady and photoinhibition was not significant, when the relative soil water content (RWC) varied from 56.3–80.9%, 47.9–82.9%, and 33.4–92.6% for P. sibirica, H. rhamnoides, and P. tabulaeformis, respectively. The light-response curves of P _N, the light compensation point (LCP), and the dark respiration rate (R _D) were well fitted using the above four models. The nonrectangular hyperbola was the best model in fitting the data; the modified rectangular hyperbola model was the second, and the rectangular hyperbola model was the poorest one. When RWC was higher or lower than the optimal range, the obvious photoinhibition and significant decrease in P _N with increasing photosynthetic photon flux density (PPFD) were observed in all three species under high light. The light saturation point (LSP) and apparent quantum yield also decreased significantly, when the upper limit of PPFD was 200 μmol m^?2 s^?1. Under these circumstances, only the modified rectangular hyperbola model was able to fit well the curves of the light response, LCP, LSP, R _D, and light-saturated P _N.     

Is the rate of photosynthesis under blue light altered in the 7B-1 tomato mutant?

Changes of photosynthesis under blue light were examined in the ABA-overproducing 7B-1 mutant in tomato. Net photosynthetic rate (P _N), stomatal conductance (g _s), intrinsic water-use efficiency (WUE_i) and chlorophyll (a+b) [Chl (a+b)] content in leaves of different insertion (1^st, 4^th and 9^th ones) were measured in 5-, 7- and 9-week-old plants. P _N, g _s, and Chl (a+b) content were mostly similar in young leaves of 7B-1 and wild type (WT) plants. With the aging of leaves, a blue-light-induced increase in P _N and g _s to steady-state was delayed and steady-state values of P _N and g _s were lower in 7B-1 plants compared with WT. Steady-state values of WUE_i were increased in 4^th and 9^th leaves of 7B-1 plants compared with WT. The results can be explained by the higher endogenous level of ABA in 7B-1 plants and their lower sensitivity to ABA in earlier growth stage.     

Over-expression of PaSOD in transgenic potato enhances photosynthetic performance under drought

Drought stress enhances the production of superoxide radical (O₂ ^._) and superoxide dismutase catalyses dismutation of it to H₂O₂ and O₂, and hence provides a first line of defense against oxidative stress. Over-expression of a cytosolic copper-zinc superoxide dismutase, cloned from Potentilla atrosanguinea (PaSOD), in potato (Solanum tuberosum ssp. tuberosum L. cv. Kufri Sutlej) resulted in enhanced net photosynthetic rates (P_N) and stomatal conductance (g_s) compared to that in the wild type (WT) plants under control (irrigated) as well as drought stress conditions. Drought stress declined leaf water potential, P_N, g_s, photosystem II activity, and chlorophyll content, but increased proline and O₂ ^._ content more in WT than transgenic potato plants (SS5). The significantly higher SOD activity in SS5 coincided well with lower O₂ ^._ content suggesting its role in maintaining higher g_s and P_N in transgenic potato plants.     

Chirality of peridinin and dinoxanthin

Details are reported for the configurational assignment of peridinin as 3S, 5R, 6R, 3′S, 5′R, 6′S including ozonolytic degradation of its p-bromobenzoate to derivatives of known chirality obtained from fucoxanthin and violaxanthin. Details regarding derivatization and CD correlations in favour of the same chirality for dinoxanthin = neoxanthin 3-acetate are given.