Cats as an aid to teaching genetics

I have used an exercise involving domestic cats in the General Genetics course at the University of Nebraska-Lincoln for the past 5 years. Using a coherent set of traits in an organism familiar to the students makes it easy to illustrate principles of transmission and population genetics. The one-semester course consists primarily of sophomores and juniors who have either taken a one-semester introductory biology course, a one-semester cell biology course, or have a strong high school biology background. The students are given a handout and asked to determine the genotype at seven unlinked loci of at least one cat. To fill out the form, the students have to grasp such concepts as dominance, incomplete dominance, temperature-sensitive mutations, epistatic interactions, sex linkage, and variable expressivity. Completing the form reinforces these concepts as they observe the cat's phenotype and fill in the genotype. I then analyze the collected data and use it in my lectures on population genetics to illustrate the Hardy-Weinberg equilibrium, calculate allele frequencies, and use statistics. This allows the students to look at population genetics in a very positive light and provides concrete examples of some often misunderstood principles.     

Molecular simulation as an aid to experimentalists

Computer-based molecular simulation techniques are increasingly used to interpret experimental data on biomolecular systems at an atomic level. Direct comparison between experiment and simulation is, however, seldom straightforward. The available experimental data are limited in scope and generally correspond to averages over both time and space. A critical analysis of the various factors that may influence the apparent degree of agreement between the results of simulations and experimentally measured quantities is presented and illustrated using examples from recent literature.     

Droperidol-fentanyl as an aid to blood collection in rabbits

Administration of a droperidol-fentanyl combination to laboratory rabbits at a dose of 2.5 mg/kg and 0.05 mg/kg body weight, respectively, produced vasodilatation which greatly facilitated blood withdrawal from the central auricular artery. The method eliminated the need for vacuum devices or topical irritants and posed little risk or discomfort to the animal.     

Live diatom silica immobilization of multimeric and redox-active enzymes

Living organisms are adept in forming inorganic materials (biominerals) with unique structures and properties that exceed the capabilities of engineered materials. Biomimetic materials syntheses are being developed that aim at replicating the advantageous properties of biominerals in vitro and endow them with additional functionalities. Recently, proof-of-concept was provided for an alternative approach that allows for the production of biomineral-based functional materials in vivo. In this approach, the cellular machinery for the biosynthesis of nano-/micropatterned SiO₂ (silica) structures in diatoms was genetically engineered to incorporate a monomeric, cofactor-independent (“simple”) enzyme, HabB, into diatom silica. In the present work, it is demonstrated that this approach is also applicable for enzymes with “complex” activity requirements, including oligomerization, metal ions, organic redox cofactors, and posttranslational modifications. Functional expression of the enzymes β-glucuronidase, glucose oxidase, galactose oxidase, and horseradish peroxidase in the diatom Thalassiosira pseudonana was accomplished, and 66 to 78% of the expressed enzymes were stably incorporated into the biosilica. The in vivo incorporated enzymes represent approximately 0.1% (wt/wt) of the diatom biosilica and are stabilized against denaturation and proteolytic degradation. Furthermore, it is demonstrated that the gene construct for in vivo immobilization of glucose oxidase can be utilized as the first negative selection marker for diatom genetic engineering.     

Cellulases as an aid to enhance saccharification of cassava root

Summary The conventional saccharification of cassava root by enzymatic hydrolysis is improved by using a little amount of cellulase and cellobiase in addition to conventional enzyme, glucoamylase. With new saccharification[glucoamylase 0.45SGU/g cassava, cellulase 4.5NCU/g cassava, cellobiase 0.09U/g cassava, pH 4.3, temperature 60°C, total volume 465ml : 100g of cassava/400ml of water], the reaction time was reduced by about 5 hours, the concentration of reducing sugar was increased by 40%, glucose production was enhanced by 10% , and the viscosity was reduced by 30%.     

Mechanics as an aid to interpreting pollen structure and function

Pollen walls can be viewed, like all other structural entities, as bodies subject to the laws of mathematics and mechanics. This view is compatible with an interpretation of pollen biology in terms of water relations. Some basic mathematical and mechanical relationships are discussed, including scaling effects, and these applied to Compositae pollen.     

Metabolite profiling as an aid to metabolic engineering in plants

The past decade has seen some impressive successes in the metabolic engineering of biotechnologically important plant pathways. However, plant metabolic engineering currently proceeds more by trial and error than by intelligent system design. A change in philosophy away from studying pathways in isolation and towards studying metabolism as a network is necessary. To support this development, improvements in technologies for metabolic analysis, a wider adoption of metabolite-profiling approaches and significant innovations in data analysis methodologies are required.     

Biochemical tests as an aid to the identification of Monascus species

The enzymic activity of nine strains of Monascus (Fungi, Ascomycotina), representing all four accepted species as defined on cultural and microscopical features, were compared by means of API ZYM enzyme testing strips and other tests developed for use in Penicillium. Consistent results were obtained between strains of the same species, confirming their taxonomy. Eight tests showed differential activity between the species and will therefore be of value as an aid to the identification of Monascus species. Strains of M. purpureus , used in the production of red-rice, had a strong polypectase activity at pH 6 which was not evidenced in the other three species even after six weeks incubation; those of M. ruber , which often occurs on cellulosic substrates in nature, were the only ones to exhibit cellulase activity.     

Numeric classification as an aid to spectral mapping of vegetation communities

This study demonstrates a vegetation mapping methodology that relates the reflectance information contained in multispectral imagery to traditionally accepted ecological classifications. Key elements of the approach used are (a) the use of cover rather than density or presence/absence to quantify the vegetation, (b) the inclusion of physical components as well as vegetation cover to describe and classify field sites, (c) development of an objective land cover classification from this quantitative data, (d) use of the field sample sites as training areas for the spectral classification, and (e) the use of a discriminant function to effectively tie the two classifications together. Land cover over 39000 ha of Australian chenopod shrubland was classified into nine groups using agglomerative hierarchical clustering, a discriminant function developed to relate cover and spectral classes, and the vegetation mapped using a maximum likelihood classification of multi-date Landsat TM imagery. The accuracy of the mapping was assessed with an independent set of field samples and by comparison with a map of land systems previously interpreted from aerial photography. Overall agreement between the digital classification and the land system map was good. The units that have been mapped are those derived from numeric vegetation classification, demonstrating that accepted ecological methods and sound image analysis can be successfully combined.     

Effects of ribose as an ergogenic aid

The amount of adenosine triphosphate (ATP) stored in the muscle available for immediate use is limited, and once used, must be resynthesized in the muscle. Ribose, a naturally occurring pentose sugar, helps resynthesize ATP for use in muscles. There have been claims that ribose supplements increase ATP levels and improve performance. Other studies have provided mixed results on the effectiveness of ribose as an ergogenic aid at high doses. None of these studies have compared the impact of the recommended dose of ribose on athletes and nonathletes under exercise conditions that are most conducive for effectiveness. The purpose of this study was to evaluate the effectiveness of ribose as an ergogenic aid at the dose recommended for supplements currently on the market during an exercise trial to maximize its efficacy. Male subjects (n = 11) performed 2 trials 1 week apart. Each trial consisted of three 30-second Wingate tests with a 2-minute recovery between each test. Trials were counterbalanced, with 1 trial being performed with 625 mg of ribose and the other with a placebo. Peak power, mean power, and percent decrease in power were recorded during each Wingate test. Repeated-measures analysis of variance (p > 0.05) found no significant differences between ribose and placebo. These results suggest that ribose had no effect on performance when taken orally, at the dose suggested by the distributor.     

Polyelectrolyte flocculation as an aid to recovery of enteroviruses from oysters

[This corrects the article on p. 540 in vol. 24.].