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1.
O-Linked fucose in glycoproteins from Chinese hamster ovary cells   总被引:2,自引:1,他引:1  
We report our discovery that many glycoproteins synthesizedby Chinese hamster ovary (CHO) cells contain fucose in O-glycosidiclinkage to polypeptide. To enrich for the possible presenceof O-linked fucose, we studied the lectin-resistant mutant ofCHO cells known as Lec1. Lec1 cells lack N-acetylglucosaminyltransferaseI and are therefore unable to synthesize complex-type N-linkedoligosaccharides. Lec1 cells were metabolically radiolabelledwith [6-3H]fucose and total glycoproteins were isolated. Glycopeptideswere prepared by proteolysis and fractionated by chromatographyon a column of concanavalin A (Con A)— Sepharose. Thesets of fractionated glycopeptides were treated with mild base/borohydrideto effect the ß-elimination reaction and release potentialO-linked fucosyl residues. The ß-elimination produced[3H]fucitol quantitatively from [3H]fucose-labelled glycopeptidesnot bound by Con A-Sepharose, whereas none was generated bytreatment of glycopeptides bound by the lectin. The total [3H]fucose-labelledglycoproteins from Lec1 cells were separated by SDS—PAGEand detected by fluorography. Treatment of selected bands ofdetectable glycoproteins with mild base/borohydride quantitativelygenerated [3H]fucitol. Pretreatment of the glycoproteins withN-glycanase prior to the SDS—PAGE method of analysis causedan enrichment in the percentage of radioactivity recovered as[3H]fucitol. Trypsin treatment of [3H]fucose-labelled intactCHO cells released glycopeptides that contained O-linked fucose,indicating that it is present in surface glycoproteins. Thesefindings demonstrate that many glycoproteins from CHO cellscontain O-linked fucosyl residues and raise new questions aboutits biosynthesis and possible function. fucose glycoproteins monosaccharide O-linked  相似文献   

2.
Protoplasts prepared from a Vinca rosea suspension culture regeneratedcell walk in culture within 24 hr. Glycoproteins containinghydroxyproline were isolated from the protoplasts prior to regenerationof the cell walls. The glycoproteins were extracted, withouta degradation procedure, with 0.05 M sodium acetate buffer,pH 5.6, containing 0.3 M NaCl. Newly synthesized hydroxyprolinein protoplasts labelled with proline appeared almost exclusivelyin the glycoproteins. In this system, the hydroxylation of prolineand the incorporation of arabinose into glycoproteins were suppressedby protein synthesis inhibitors. Inhibition of hydroxylationby the removal of Fe2+ also caused suppression of arabinoseincorporation into glycoproteins. These observations suggestthat glycoproteins are precursors of extensin, a hydroxyproline-richglycoprotein contained in the cell wall of plants. The precursorswere heterogeneous in size and charge as determined by gel filtrationand ion exchange chromatography. (Received February 16, 1979; )  相似文献   

3.
ß1,4-Galactosyltransferase (GalTase) plays a centralrole in the biosynthesis of N-acetyllactosamine-containing oligo-saccharides.However, despite this seemingly important function, little isknown about how changes in the levels of GalTase affect oligosaccharidebiosynthesis. We have examined the effects of overexpressingGalTase on the glycosylation of endogenous glycoproteins inF9 mouse embryonal carcinoma cells. Cells transfected with eitherthe short form of the GalTase cDNA (encoding a protein of 386amino acids) or the long form of the GalTase cDNA (encodinga protein of 399 amino acids) had a 3-fold increase in totalGalTase activity, relative to control F9 cells. Analysis ofpronase-digested glycopeptides obtained from control and transfectedcells after metabolic labelling with [6-3H]galactose revealedno significant qualitative or quantitative differences, as assessedby Bio-Gel P-6 gel filtration chromatography and Tomato lectinaffinity chroma-tography. Furthermore, SDS-PAGE analysis ofimmuno-precipitated [3H]galactose-labelled lysosomal-associatedmembrane protein-1 (LAMP-1) glycoprotein showed no differencein amounts or mobility. Pronase digestion and subsequent analysisof the gel-fractionated LAMP-1 glycoproteins also indicatedno differences between the various cell lines. The inabilityof elevated GalTase activity to affect glycosylation was notdue to limiting levels of GalTase substrates, since an excessof substrates was detectable in lysed cells using either endogenousor exogenous GalTase and UDP-[3H]galactose. Finally, the subcellulardistribution of GalTase, as assessed by sucrose gradient fractionation,was similar between all cell types, thus suggesting that GalTasewas appropriately compartmentalized in the transfected cells.More importantly, GalTase specific activities in the Golgi membranesof the transfected cells were 3–4 times greater than incontrol cells. These results show that selectively increasingGalTase activity does not alter glycoprotein biosynthesis inF9 cells. F9 cells galactosyltransferase glycoprotein biosynthesis  相似文献   

4.
A HEMPAS (hereditary erythroblastic multinuclearity with positiveacidified serum test) erythrocyte, atypical Variant II (referredto herein as Variant II-gal-), lacking long-chain polylactosamineon both glycoproteins (Band 3 and 4.5) and glycosphingolipids,was characterized by the carbohydrate profile of the erythrocytemembrane according to Fukuda et al. (Blood, 73, 1331–1339,1989). Two laboratories previously reported that polylactosamineisolated from the erythrocyte protein Band 3 inhibited invasionof red blood cells by Plasmodium falciparum in malarial culture,suggesting a role for this carbohydrate in adhesion of the parasite.Therefore, HEMPAS erythrocyte Variant II-gal- presented a uniqueopportunity to further examine this premise. Freshly drawn bloodsamples (normal and HEMPAS Variant II-gal-) were separatelyincubated with P.falciparum from mannitol-synchronized cultures.The parasite was found to invade HEMPAS Variant II-gal- erythrocytesat a 30% lower rate through two life cycles, as shown by microscopicevaluation of invasion and by [3H]hypoxanthine incorporationinto parasite. This observation, along with the published factthat glycophorin-deficient MkMk cells are also infectable, butat a lower rate, indicates that neither sialoglycoproteins norpolylactosamines are an obligate adhesive ligand for P.falciparum,although the possibility remains that either may still contributeto adhesive events during infection. HEMPAS malaria Plasmodium falciparum polylactosamine  相似文献   

5.
The functions of sulphated monosaccharides within glycosaminoglycans(GAGs) and glycoproteins are being studied intensely, but progressis hindered by an inability to selectively desulphate glycoconjugates.We recently identified an N-acetylglucosamine-6-sulphate sulphatase(NG6SS) from bovine kidney that can remove sulphate from N-acetylglucosamine-6-sulphate(GlcNAc-6-SO4) within oligosaccharides and glycoproteins. However,the potential ‘endosulphatase’ activity of the NG6SStoward GAGs is not known. To test for this possibility, [3H]glucosamine-,[3H]galactose- and 35SO4- labelled keratan sulphate (KS) wereseparately prepared by metabolic radiolabelling of bovine cornea.NG6SS quantitatively removed sulphate from KS without releaseof sugar fragments. The enzyme had a Km of 4.7 mM toward freeGlcNAc-6-SO4, but its Km for commercially available bovine cornealKS was found to be 9.1 µM. Analyses of both KS and heparansulphate after treatment with NG6SS demonstrated significantloss of sulphate from GlcNAc-6-SO4 in both GAGs. These findingsmay be relevant for future studies aimed at defining the function(s)of GlcNAc-6-SO4 residues in GAGs and understanding the catabolismof GAGs, especially in regard to sulphatidoses, such as SanfilippoD syndrome in humans, which involves a deficiency of NG6SS activity catabolism endosulphatase glycosaminoglycans sulphation  相似文献   

6.
Extracellular matrix (ECM) glycoproteins regulate neuronal development and axonal growth. In this paper, the ECM glycoprotein vitronectin was identified and localized in the embryonic chick neuroretina. To identify potentially important neurite outgrowth-promoting molecules, responses of embryonic chick retinal neurons to vitronectin and thrombospondin, another retinal ECM constituent, were examined. These neurons were shown to attach and extend neurites on either glycoprotein. Integrins containing the alpha v or beta 1 subunits mediate both responses to vitronectin and neurite outgrowth on thrombospondin. Attachment to thrombospondin was inhibited by heparin, suggesting that neurons also utilize a proteoglycan or sulfated glycolipid as a receptor for this glycoprotein. Thus, retinal neurons use specific receptors to interact with vitronectin and thrombospondin, two glycoproteins present in the embryonic neuroretina, suggesting roles for these ligands and their receptors in retinal development.  相似文献   

7.
The effect of tunicamycin, an inhibitor of glycosylation ofproteins, on the gametic differentiation of Chlamydomonas reinhardtiiwas studied. When mt+ cells were treated with tunicamycin duringgametogenesis, the acquisition of agglutinability on their flagellawas completely inhibited. However, no significant inhibitionwas observed when mt cells were treated with tunicamycinduring gametic induction. The agglutinability of the fully competentgametes of mt+ cells decreased sharply after about 4 hr of incubationwith tunicamycin and was lost completely after 8 hr. These resultsindicate that the gametic flagellar membrane of the mt+ cellmay acquire glycoproteins with tunicamycin sensitive sugar chains,the halflife of which is about 6 hr. (Received August 11, 1981; Accepted October 7, 1981)  相似文献   

8.
A significant percentage of eukaryotic proteins contain posttranslationalmodifications, including glycosylation, which are required forbiological function. However, the understanding of the structure–functionrelationships of N-glycans has lagged significantly due to themicroheterogeneity of glycosylation in mammalian produced proteins.Recently we reported on the cellular engineering of yeast toreplicate human N-glycosylation for the production of glycoproteins.Here we report the engineering of an artificial glycosylationpathway in Pichia pastoris blocked in dolichol oligosaccharideassembly. The PpALG3 gene encoding Dol-P-Man:Man5GlcNAc2-PP-Dolmannosyltransferase was deleted in a strain that was previouslyengineered to produce hybrid GlcNAcMan5GlcNAc2 human N-glycans.Employing this approach, combined with the use of combinatorialgenetic libraries, we engineered P. pastoris strains that synthesizecomplex GlcNAc2Man3GlcNAc2 N-glycans with striking homogeneity.Furthermore, through expression of a Golgi-localized fusionprotein comprising UDP-glucose 4-epimerase and ß-1,4-galactosyltransferase activities we demonstrate that this structure isa substrate for highly efficient in vivo galactose addition.Taken together, these data demonstrate that the artificial invivo glycoengineering of yeast represents a major advance inthe production of glycoproteins and will emerge as a practicaltool to systematically elucidate the structure–functionrelationship of N-glycans. 1 These authors contributed equally to this work. 2 To whom correspondence should be addressed; e-mail: swildt{at}glycofi.com  相似文献   

9.
Influenza C virus spike glycoprotein HEF specifically recognizesglycoconjugates containing 9-O-acetyl-N-acetylneuraminic acid.The same protein also contains an esterase activity. Takingadvantage of these two properties, influenza C virus was usedas a very sensitive probe for the detection of traces of 9-O-acetyl-N-acetylneuraminicacid in human leucocytes. The binding of influenza C virus toleucocyte glycoproteins and gangliosides separated by sodiumdodecyl sulphate–polyacrylamide gel electrophoresis andthin-layer chromatography, respectively, was assayed using achromogenic esterase substrate. In this way, glycoproteins ofB-lymphocytes and T-lymphocytes were found to contain 9-O-acetylatedsialic acids. Of the various 9-O-acetylated gangliosides detected,one had the characteristics of 9-O-acetylated GD3. The identificationof 9-O-acetylated sialic acids on distinct glycoproteins andglycolipids should be helpful in assigning a physiological roleto this sugar. O-acetylation gangliosides influenza C virus lymphocytes sialic acids  相似文献   

10.
Oxley  David; Bacic  Antony 《Glycobiology》1995,5(5):517-523
Gametophytic self-incompatibility, a mechanism that preventsinbreeding in some families of flowering plants, is mediatedby the products of a single genetic locus, the S-locus. Theproducts of the S-gene in the female sexual tissues of Nicotianaalata are an allelic series of glycoproteins with RNase activity.In this study, we report on the microheterogeneity of N-linkedglycosylation at the four potential N-glycosylation sites ofthe S2-glycoprotein. The S-glycoproteins from N.alata containfrom one to five potential N-glycosylation sites based on theconsensus sequence Asn-Xaa-Ser/Thr. The S2-glycoprotein containsfour potential N-glycosylation sites at Asn27, Asn37, Asn138and Asn150, designated sites I, n, IV and V, respectively. SiteIII is absent from the S2-glycoprotein. Analysis of glycopeptidesgenerated from the S2-glycoprotein by trypsin and chymotrypsindigestions revealed the types of glycans and the degree of microheterogeneitypresent at each site. Sites I (Asn27) and IV (Asn138) displaymicroheterogeneity, site II (Asn37) contains only a single typeof N-glycan, and site V (Asn150) is not glycosylated. The microheterogeneityobserved at site I on the S2-glycoprotein is the same as thatobserved at the only site, site I, on the Srglycoprotein (Woodwardet al., Glycobiology, 2, 241-250, 1992). Since the N-glycosylationconsensus sequence at site I is conserved in all S-glycoproteinsfrom other species of self-incompatible solanaceous plants,glycosylation at this site may be important to their function.No other post-translational modifications (e.g. O-glycosylation,phosphorylation) were detected on the S2-glycoprotein. fertilization microheterogeneity N-glycans plants RNase  相似文献   

11.
The polypeptide composition of nuclear envelopes prepared fromhypocotyls of mung bean (Vigna radiata) was investigated. Thetissue was homogenized in the presence of Triton X-100 and nucleiwere isolated by differential and discontinuous Percoll gradientcentrifugation. The nuclei were subjected to sonication in 2M KC1 or 50 mM lithium diiodosalicylate and then the nuclearenvelopes were collected by centrifugation. Proteins in theenvelope fraction were analyzed by sodium dodecylsulfate-polyacrylamidegel electrophoresis and blotting techniques. When the envelopefraction was incubated with [-32P]ATP, 10 to 15 polypeptideswere labeled and the intensity of labeling of some of thesepolypeptides was enhanced by the addition of calcium ions. Theresults suggest the presence of a protein-phosphorylation systemin nuclear envelopes. Three polypeptides of 100, 42, and 40kDa stained blue with the cationic carbocyanine dye "Stains-all",and they were labeled with 45Ca2+ on a transfer membrane. Thelectin concanavalin A recognized glycoproteins that migratedas polypeptides of 50, 49, 47, 43, 35 and 32 kDa, respectively.Of these polypeptides the two larger ones were prominent andwere solubilized by treatment of the envelope fraction withKCl at 2 M but not at less than 100 mM. These results suggestthat the mung bean nuclear envelope contains some calcium-bindingproteins and glycoproteins. These newly identified proteinsmay become useful as characteristic markers of the nuclear envelope. (Received July 16, 1993; Accepted December 15, 1993)  相似文献   

12.
Ligatin is a filamentous plasma membrane protein that serves as a baseplate for the attachment of peripheral glycoproteins to the external cell surface. Ligatin can be released from intact, embryonic chick neural retinal cells by treatment with 20 mM Ca++ without adversely affecting their viability. α-Glucose-1-phos phate is also effective in removing ligatin-associated glycoproteins from intact cells. After either of these treatments, the retinal cells seem not to exhibit Ca++ -dependent adhesion for one another. It is thus suggested that ligatin in neural retina may serve as a baseplate for the attachment to the cell surface of glycoproteins active in Ca++-dependent adhesion. The finding that Ca++ serves to protect Ca++-dependent adhesion molecules from digestion by trypsin is discussed in relation to steric constraints on trypsin's accessibility to these adhesion molecules because of their possible binding to arrayed ligatin filaments.  相似文献   

13.
A protocol is described for uniform 13C labelling of terminalgalactose residues of the glycan chains of glycoproteins, usingan enzymatic method which does not perturb the protein. Thetechnique is illustrated by application to the biantennary N-linkedglycan chains attached at Asn 297 of immunoglobulin G (IgG).Isotope-edited NMR experiments on this glycoprotein yield datawhich suggest that the galactose residues on the glycan existin two discrete environments, with the galactose in one environmenthaving greater mobility than that in the other. These data arequalitatively consistent with crystallographic data on an Fcfragment, which suggest that one arm of the glycan is in contactwith the protein, while the other projects into the space betweenthe C2 domains. Quantitatively, however, these data cannot berationalized with the crystallographic data, which implies subtledifferences in oligosaccharide structure and dynamics betweenthe solution and crystal states of Fc. dynamics glycoprotein glycans in situ 13C isotopic labelling structure  相似文献   

14.
The CLCA family ofCa2+-activatedCl channels has recentlybeen discovered, with an increasing number of closely related members isolated from different species. Here we report the cloning of thesecond human homolog, hCLCA2, from a human lung cDNA library. Northernblot and RT-PCR analyses revealed additional expression in trachea andmammary gland. A primary translation product of 120 kDa was cleavedinto two cell surface-associated glycoproteins of 86 and 34 kDa intransfected HEK-293 cells. hCLCA2 is the first CLCA homolog for whichthe transmembrane structure has been systematically studied.Glycosylation site scanning and protease protection assays revealedfive transmembrane domains with a large, cysteine-rich, amino-terminalextracellular domain. Whole cell patch-clamp recordings ofhCLCA2-transfected HEK-293 cells detected a slightly outwardly rectifying anion conductance that was increased in the presence of theCa2+ ionophore ionomycin andinhibited by DIDS, dithiothreitol, niflumic acid, and tamoxifen.Expression in human trachea and lung suggests that hCLCA2 may play arole in the complex pathogenesis of cystic fibrosis.

  相似文献   

15.
Amacrine cells are interneurons that have diverse functionsin retinal signal processing. In order to study signaling andmodulation in retinal amacrine cells, we employ a simplifiedculture system containing identifiable GABAergic amacrine cells.Immunocytochemistry experiments indicate that GABAergic amacrinecells express metabotropic glutamate receptor 5 (mGluR5), agroup I mGluR usually linked to the IP3 signaling pathway. Ca2+imaging experiments using an mGluR5-specific agonist indicatethat these receptors are functional and when activated, canstimulate temporally diverse Ca2+ elevations. To begin to establishthe role of these receptors in modulating amacrine cell function,we have used electrophysiological methods to ask whether ionchannels are the targets of mGluR5-dependent modulation. Herewe discuss our results indicating that activation of mGluR5leads to enhancement of currents through GABAA receptors. Thisenhancement is dependent upon elevations in cytosolic Ca2+ andactivation of protein kinase C (PKC). To explore the consequencesof Ca2+ elevations in another context, we have used nitric oxide(NO) donors to mimic the effects of activating the Ca2+-dependentsynthetic enzyme for NO, neuronal nitric oxide synthase. Wefind that exposure to NO donors also enhances the amplitudeof currents through GABAA receptors. Together, these resultsindicate that glutamate from presynaptic bipolar cells has thepotential to work through multiple mechanisms to regulate thefunction of amacrine-to-amacrine cell GABAergic synapses.  相似文献   

16.
Suppressors: Determinants of Specificity Produced by Plant Pathogens   总被引:2,自引:0,他引:2  
Plant pathogens secrete suppressors that delay or prevent thehost defense responses, with resultant conditioning of hostcells such that they become susceptible even to avirulent ornon-pathogenic microorganisms. Suppressors have been characterizedas glycoproteins, glycopeptides, peptides and anionic and nonanionicglucans. A suppressor itself is non-toxic to plant cells and,thus, it can be distinguished from host-specific toxins producedby certain pathogens. Suppressors disturb fundamental functionsof host plasma membranes. For example, the suppressor from apea pathogen, Mycosphaerella pinodes, inhibits both the ATPaseactivity and polyphosphoinositide metabolism in pea plasma membranes,causing the temporary suppression of the signal-transductionpathway that leads to the expression of defense genes, whichencode key enzymes in the biosynthetic pathway to phytoalexin.In this review, evidence for the role of suppressors in thedetermination of plant host-parasite specificity is summarized. 3Present address: Plant Pathology Laboratory, School of Agriculture,Nagoya University, Chikusa, Nagoya, 464-01 Japan  相似文献   

17.
Degradation of extracellular ATP by the retinal pigment epithelium   总被引:6,自引:0,他引:6  
Stimulation of ATP or adenosine receptors causes important physiological changes in retinal pigment epithelial (RPE) cells that may influence their relationship to the adjacent photoreceptors. While RPE cells have been shown to release ATP, the regulation of extracellular ATP levels and the production of dephosphorylated purines is not clear. This study examined the degradation of ATP by RPE cells and the physiological effects of the adenosine diphosphate (ADP) that result. ATP was readily broken down by both cultured human ARPE-19 cells and the apical membrane of fresh bovine RPE cells. The compounds ARL67156and -mATP inhibited this degradation in both cell types. RT-PCR analysis of ARPE-19 cells found mRNA message for multiple extracellular degradative enzymes; ectonucleotide pyrophosphatase/phosphodiesterase eNPP1, eNPP2, and eNPP3; the ectoATPase ectonucleoside triphosphate diphosphohydrolase NTPDase2, NTPDase3, and some message for NTPDase1. Considerable levels of ADP bathed RPE cells, consistent with a role for NTPDase2. ADP and ATP increased levels of intracellular Ca2+. Both responses were inhibited by thapsigargin and P2Y1 receptor inhibitor MRS 2179. Message for both P2Y1 and P2Y12 receptors was detected in ARPE-19 cells. These results suggest that extracellular degradation of ATP in subretinal space can result in the production of ADP. This ADP can stimulate P2Y receptors and augment Ca2+ signaling in the RPE. ectoapyrase; PC-1; CD39; CD39L1; P2Y1; P2Y12; ADP; ATP release; photoreceptors; retinal detachment  相似文献   

18.
The purpose if this study was to elucidate how extracellular ATP causes cell death in the retinal microvasculature. Although ATP appears to serve as a vasoactive signal acting via P2X7 and P2Y4 purinoceptors, this nucleotide can kill microvascular cells of the retina. Because P2X7 receptor activation causes transmembrane pores to form and microvascular cells to die, we initially surmised that pore formation accounted for ATP's lethality. To test this hypothesis, we isolated pericyte-containing microvessels from rat retinas, assessed cell viability using Trypan blue dye exclusion, detected pores by determining the uptake of the fluorescent dye YO-PRO-1, measured intracellular Ca2+ with the use of fura-2, and monitored ionic currents via perforated patch pipettes. As predicted, ATP-induced cell death required P2X7 receptor activation. However, we found that pore formation was minimal because ATP's activation of P2Y4 receptors prevented P2X7 pores from forming. Rather than opening lethal pores, ATP kills via a mechanism involving voltage-dependent Ca2+ channels (VDCC). Our experiments suggest that when high concentrations of ATP caused nearly all microvascular P2X7 receptor channels to open, the resulting profound depolarization opened VDCC. Consistent with lethal Ca2+ influx via VDCC, ATP-induced cell death was markedly diminished by the VDCC blocker nifedipine or a nitric oxide (NO) donor that inhibited microvascular VDCC. We propose that purinergic vasotoxicity is normally prevented in the retina by NO-mediated inhibition of VDCC and P2Y4-mediated inhibition of P2X7 pore formation. Conversely, dysfunction of these protective mechanisms may be a previously unrecognized cause of cell death within the retinal microvasculature. calcium channels; capillaries; purinoceptors; vasotoxicity  相似文献   

19.
The intracellular location of the two major O-glycosylatingenzymes (hydroxyproline-arabinosyl and -galactosyl transferases)involved in the synthesis of the cell wall glycoproteins ofChlamydomonas reinhardii was determined by isopycnic sucrosedensity gradient centrifugation. A comparison of gradients preparedunder low and high Mg2+-conditions has enabled us to clearlyallocate the galactosyl transferase to membranes of the Golgiapparatus. In contrast, the membranes which bear the arabinosyltransferase respond to a change in Mg2+-concentration in justthe same way as the endoplasmic reticulum does. Analysis ofthe product formed in vitro from UDP-[14C]arabinose and microsomalmembranes has confirmed the synthesis of an arabinose-containinghydroxyproline-rich glycoprotein. Our results indicate thatwhilst the Golgi apparatus is responsible for some of the glycosylationreactions in hydroxyproline-rich glycoprotein biosynthesis anappreciable portion of the arabinosylation is accomplished whilethe polypeptide is still in the lumen of the endoplasmic reticulum. 3This paper is dedicated to Professor Lothar Jaenicke on theoccasion of his 65th birthday. (Received July 2, 1988; Accepted March 8, 1989)  相似文献   

20.
Summary: The development of robust high-performance liquid chromatography(HPLC) technologies continues to improve the detailed analysisand sequencing of glycan structures released from glycoproteins.Here, we present a database (GlycoBase) and analytical tool(autoGU) to assist the interpretation and assignment of HPLC-glycanprofiles. GlycoBase is a relational database which containsthe HPLC elution positions for over 350 2-AB labelled N-glycanstructures together with predicted products of exoglycosidasedigestions. AutoGU assigns provisional structures to each integratedHPLC peak and, when used in combination with exoglycosidasedigestions, progressively assigns each structure automaticallybased on the footprint data. These tools are potentially verypromising and facilitate basic research as well as the quantitativehigh-throughput analysis of low concentrations of glycans releasedfrom glycoproteins. Availability: http://glycobase.ucd.ie Contact: matthew.campbell{at}nibrt.ie Associate Editor: Limsoon Wong Present address: Dublin-Oxford Glycobiology Laboratory, NationalInstitute for Bioprocessing Research and Training, Conway Institute,University College Dublin, Dublin, Ireland. Present address: Ludger Ltd, Culham Science Centre, Abingdon,Oxfordshire OX14 3EB., UK.  相似文献   

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