Effect of different soil and clove treatments in the control of white rot of garlic

Soil solarisation was consistently efficacious in reducing inoculum density to undetectable levels in a field naturally‐infested with Sclerotium cepivorum. This treatment delayed epidemic onset of white rot of garlic 2–3 months as compared with the untreated control or the inoculation of planting furrows with Glomus intraradices. Furthermore, significant reductions of disease incidence and of the standardised AUDPC were also observed in solarised plots, resulting in quantitative and qualitative yield improvement. Similar effects were observed in plots planted with tebuconazole‐treated cloves, confirming previous results, whereas Trichoderma harzianum was ineffective as a biocontrol agent, when applied to planting furrows. The inoculation of plots with G. intraradices before planting, in three consecutive years, was neither effective for disease control nor on the development of garlic, although the root systems of garlic plants from all the experimental treatments were heavily mycorrhizal at harvest, indicating the presence of native arbuscular mycorrhizal propagules in the soil and their survival after soil solarisation.     

Plant growth promotion and biological control of Pythium aphanidermatum, a pathogen of cucumber, by endophytic actinomycetes

Aims:  To evaluate the potential of Actinoplanes campanulatus , Micromonospora chalcea and Streptomyces spiralis endophytic in cucumber roots, to promote plant growth and to protect seedlings and mature plants of cucumber from diseases caused by Pythium aphanidermatum , under greenhouse conditions.
Methods and Results:  Three endophytic isolates, out of 29, were selected through tests aimed at understanding their mechanisms of action as biocontrol agents and plant growth promoters. When applied individually or in combination, they significantly promoted plant growth and reduced damping-off and crown and root rot of cucumber. The combination of the three isolates resulted in significantly better suppression of diseases and plant growth promotion, than where the plants were exposed to individual strains.
Conclusions:  The three selected actinomycete isolates colonized cucumber roots endophytically for 8 weeks, promoted plant growth and suppressed pathogenic activities of P. aphanidermatum on seedling and mature cucumber plants.
Significance and Impact of the Study:  The results clearly show that the endophytic, glucanase-producing actinomycetes used, especially as a combined treatment, could replace metalaxyl, which is the currently recommended fungicide for Pythium diseases in the United Arab Emirates. These endophytic isolates also have the potential to perform as plant growth promoters, which is a useful attribute for crop production in nutrient impoverished soils.     

Regenerating Topsoil Functionality in Four Drastically Disturbed Soil Types by Compost Incorporation

The low water-holding capacity and low nutrient levels of roadcuts in northern California cause many of these disturbed areas to remain chronically barren. Yard waste compost was incorporated into four nonvegetated substrates found along roadcuts (decomposed granite [DG], lahar, serpentine, and sandstone) in order to regenerate topsoil infiltration, water-holding capacity, and nutrient availability. Soil physical and chemical properties, as well as the vegetative response of a native perennial grass, were compared between treatments (non-tilled, tilled, and tilled with compost amendment). Tillage and compost addition decreased soil bulk density compared to the non-tilled treatment, and the compost treatment increased the soil carbon and nitrogen contents compared to the non-tilled and tilled treatments. Tillage alone resulted in an increase in saturated hydraulic conductivity in soils that did not contain a large amount of coarse fragments. Tillage also reduced sediment loss in all soils except the DG. Foliar C¹³ content did not predict water stress consistently between treatments. The incorporation of yard waste compost increased plant available water in coarse but not in fine-textured soils, and aboveground plant biomass was significantly greater in the compost treatment than in either of the other treatments. Although the incorporation of yard waste compost generated the greatest revegetation success, tillage alone may be a sufficient treatment if residual soils have adequate nutrient levels.     

Suppression of Rhizoctonia solani diseases of sugar beet by antagonistic and plant growth-promoting yeasts

AIMS: Isolates of Candida valida, Rhodotorula glutinis and Trichosporon asahii from the rhizosphere of sugar beet in Egypt were examined for their ability to colonize roots, to promote plant growth and to protect sugar beet from Rhizoctonia solani AG-2-2 diseases, under glasshouse conditions. METHODS AND RESULTS: Root colonization abilities of the three yeast species were tested using the root colonization plate assay and the sand-tube method. In the root colonization plate assay, C. valida and T. asahii colonized 95% of roots after 6 days, whilst Rhod. glutinis colonized 90% of roots after 8 days. Root-colonization abilities of the three yeast species tested by the sand-tube method showed that roots and soils attached to roots of sugar beet seedlings were colonized to different degrees. Population densities showed that the three yeast species were found at all depths of the rhizosphere soil adhering to taproots up to 10 cm, but population densities were significantly (P < 0.05) greater in the first 4 cm of the root system compared with other root depths. The three yeast species, applied individually or in combination, significantly (P < 0.05) promoted plant growth and reduced damping off, crown and root rots of sugar beet in glasshouse trials. The combination of the three yeasts (which were not inhibitory to each other) resulted in significantly (P < 0.05) better biocontrol of diseases and plant growth promotion than plants exposed to individual species. CONCLUSIONS: Isolates of C. valida, Rhod. glutinis and T. asahii were capable of colonizing sugar beet roots, promoting growth of sugar beet and protecting the seedlings and mature plants from R. solani diseases. This is the first successful attempt to use yeasts as biocontrol agents against R. solani which causes root diseases. SIGNIFICANCE AND IMPACT OF THE STUDY: Yeasts were shown to provide significant protection to sugar beet roots against R. solani, a serious soil-borne root pathogen. Yeasts also have the potential to be used as biological fertilizers.     

我国自然湿地的基本特点

我国自然湿地的基本特点王宪礼（中国科学院沈阳应用生态研究所,１１００１５）ＴｈｅＦｕｎｄａｍｅｎｔａｌＣｈａｒａｃｔｅｒｉｓｔｉｃｓｏｆｔｈｅＷｅｔｌａｎｄｓｉｎＣｈｉｎａ．ＷａｎｇＸｉａｎｌｉ（ＩｎｓｔｉｔｕｔｅｏｆＡｐｐｌｉｅｄＥｃｏｌｏｇｙ,...     

真菌降解木质素研究进展及在好氧堆肥中的研究展望

综述了近十年来真菌降解木质素的研究进展,包括木质素的存在与结构,真菌降解木质素生物学、酶系及作用机理、生理学以及在环境工程中应用方面的研究进展,并对好氧堆肥处理城市垃圾中木质素生物降解的研究作了展望 。     

Effect of green manure on Pythium spp. population and microbial communities in intensive cropping systems

Saprophytic soil-borne pathogens can be either actively suppressed by organic amendments or enhanced, depending on soil health conditions. This can be deleterious in the event of selection of a soil-borne population by previous soil management and short crop rotation. Trials were performed in the open field and in pots, using naturally infected soil from intensive crop systems, i.e., soil from fields with 8 years of strawberry cultivation. The aim was to study short-term response of Pythium and soil microbial populations to green manure. The use of green manure in these naturally infested soils, 3–10 weeks after fresh tissue incorporation, caused Pythium populations to increase concurrent with an increase in soil microbial populations, and did not result in the suppression of the pathogen. A more elaborate trial was performed under controlled conditions, amending soil with fresh wheat plant material, air-dried wheat plant material and an organic fertilizer with a high level of humic substances. Although compared to the original soil, all amendments caused a similar increase in organic matter content and small differences in soil respiration, incorporation of fresh, not decomposed, plant material strongly increased Pythium, while the organic fertilizer did not affect the original level of the pathogen population. The increase in total number of fungi and bacteria did not have any suppressive effect on the Pythium population in naturally infested soil used for this study.     

Barley Root Morphology Affects the Zoospore Production Rate by the Obligate Root Parasite and Soil-borne Virus Vector Polymyxa graminis

Plasmodiophorid parasites in the genus Polymyxa infect roots by means of zoospores and transmit more than 15 soil-borne viruses in a wide range of arable crops. Barley mutants, selected for variations in root hair formation and morphology, were used to demonstrate that root hairs were important but not essential for infection by zoospores of Polymyxa graminis . The relative rates of parasite establishment in roots were determined indirectly as the relative number of zoospores released by roots inoculated with P. graminis in wild-type and mutant plants. The number of P. graminis zoospores released per gram root fresh weight was significantly reduced in brb and rhl1 . b mutants, both of which have no root hairs. This is an important result because there are no natural sources of resistance to P. graminis. Reducing infection levels of viruliferous P. graminis will slow the build up of virus inoculum in the soil and the selection of strains able to overcome the virus resistance in current cereal cultivars.     

Geochemical Peculiarities of the Carbonate Constructions Formed during Microbial Oxidation of Methane under Anaerobic Conditions

The aragonite constructions of the Black Sea are formed in a stable anaerobic zone and are a perfect object to study the natural mechanism of anaerobic methane oxidation. The most probable pathway of methane oxidation is its methanogen-mediated reaction with bicarbonates, dissolved in seawater, with the formation of water and acetate, which is then consumed by other components of the anaerobic community. Comparison of the ¹³C values of carbonate minerals and organic matter once more demonstrated that the formation of the organic matter of biomass is accompanied by intense fractionation of carbon isotopes, as a result of which the total organic matter of biomass acquires an extremely light isotopic composition, characterized by ¹³C values as low as –83.8.     

北方玉米秸秆与猪粪混合厌氧发酵条件

为了提高中国北方地区秸秆厌氧发酵产气效果,将秸秆与猪粪混合来进行厌氧发酵研究.在接种物量为20%、总固体发酵物浓度控制为10%的条件下,分别研究了温度(25℃、35 ℃)、玉米秸秆与猪粪质量比(1:1、1.5:1、2:1)、秸秆粒径(<1 cm、1～3 cm、5～10 cm)对玉米秸秆与猪粪混合厌氧发酵产气效果的影响....     

Simultaneous Removal of Mn(II) and Nitrate by the Manganese-Oxidizing Bacterium Acinetobacter sp. SZ28 in Anaerobic Conditions

A novel bacterium, strain SZ28, identified as Acinetobacter sp., showed anaerobic denitrification ability using Mn(II) as the electron donor. Nitrate-nitrogen concentration decreased from nearly 16.52–mg L^?1 to 4.4–mg L^?1, without accumulation of nitrite as an intermediate, with a maximum of 0.063–mg NO₃^?-N L^?1 h^?1, reaching a peak of 0.085–mg NO₃^?-N L^?1 h^?1 in sodium acetate. The nitrate removal rate reached 0.067–mg NO₃^?-N L^?1 h^?1, 0.059–mg NO₃^?-N L^?1 h^?1, and 0.078 mg NO₃^?-N L^?1 h^?1 using Mn(II), S(II), and Fe(II) as electron donors, respectively. The optimum pH was 6.0, with a removal rate of 0.063–mg NO₃^?-N L^?1 h^?1     

Anaerobic Biodegradation of Alkylbenzenes in Laboratory Microcosms Representing Ambient Conditions

A microcosm study was performed to document the anaerobic biodegradation of benzene, toluene, ethylbenzene, m- xylene, and/or o-xylene in petroleum-contaminated aquifer sediment from sites in Michigan (MI) and North Carolina (NC) and relate the results to previous field investigations of intrinsic bioremediation. Laboratory microcosms, designed to simulate ambient conditions, were constructed under anaerobic conditions with sediment and groundwater from source, mid-plume, and end-plume locations at each site. The general patterns of biodegradation and electron acceptor utilization in the microcosms were consistent with field data. At the MI site, methane was produced after a moderate lag period, followed by toluene degradation in all sets of microcosms. At the NC site, biodegradation of the target compounds was not evident in the source area microcosms. In the mid-plume microcosms, toluene and o-xylene biodegraded first, followed by m-xylene and benzene, a pattern consistent with contaminant decay along the plume length. Chemical extraction of microcosm sediment at the beginning and end of me incubation indicated that iron-reducing conditions were dominant and iron reduction occurred on a sediment fraction not extracted by 0.5N HC1. In the end-plume microcosms, degradation of benzene, toluene, and xylene isomers occurred but was variable between replicates. Consistent with field data, dissolved concentrations of the target contaminant(s) persisted at low but detectable levels (0.05 to 0.25 μM) in microcosms from both sites where biodegradation was measured.     

烟草废弃物在堆肥领域的研究进展

在烟草生产及加工过程中,通常会产生大量的烟草废弃物,如何有效利用这些废弃物以避免环境污染和资源浪费,已成为烟草行业亟需解决的问解。研究发现,烟草废弃物堆肥化处理是规模化利用废弃资源的有效途径之一,对烟草农业的绿色、低碳、循环、可持续发展具有重要意义。从有机肥堆肥制备技术、肥效研究等方面进行了系统综述,从整体上展示了烟草废弃物堆肥技术的发展现状,以期为国内烟草废弃物源堆肥未来技术的研发及产业化提供一定的参考。通过分析发现,在堆肥制备技术方面,主要有微生物菌剂添加技术、共堆肥技术和烟草材料预处理技术3种,此外还衍生出液态有机肥和厌氧发酵联产有机肥技术;在堆肥肥效研究方面,烟草废弃物堆肥可明显改善土壤的物性参数、化学参数以及生物学参数,显著钝化土壤重金属元素,进而提高作物的产量或品质,其中堆肥与化学肥料配施的效果相对较好;堆肥的多功能化是未来堆肥创新利用的重要途径。     

垃圾渗滤液中好氧反硝化菌的筛选及其反硝化条件优化

从江苏省常州市某垃圾渗滤液处理厂的纯氧曝气池中提取活性污泥,筛选获得1株高效好氧反硝化菌CZ1。根据菌株形态、生理生化特性进行初步鉴定,并结合该菌株的16S rDNA基因序列分析,判定该菌株为蜡样芽胞杆菌(Bacillus cereus)。研究了菌株的好氧反硝化特性,结果表明,以硝酸钾为唯一氮源,CZ1在24h内对硝酸盐氮的去除率达到97.69%。同时考察了碳源种类、C/N、温度、初始pH以及溶解氧对该菌株好氧反硝化能力的影响,通过单因素实验获得其最佳好氧反硝化条件:温度35℃,丁二酸钠为唯一碳源,C/N为6,初始pH值为7.0~7.5,转速为160 r/min。     

Biological Control of Stem Canker and Black Scurf on Potato by Date Palm Compost and its Associated Fungi

The suppressive effects of two different types of date palm composts and some of their indigenous microorganisms were evaluated in vitro and on potato plants inoculated with Rhizoctonia solani. Fungi isolated from composts screened against R. solani by dual cultural assays on PDA showed a significant inhibition of pathogen mycelium growth as compared with untreated control. The type of hyphal interactions between R. solani and each tested antagonist was observed by light microscopy. Microscopic observations carried out at the confrontation zone of both agents showed different mechanisms of actions: mycelia lyses, mycoparasitism and/or formation of mycelia cords via anatomosis between mycelia filaments. Unsterilized and sterilized compost extracts were tested for efficacy against R. solani using agar‐well diffusion method or by pouring the extracts on PDA. Two sterilization methods were used: a filtration through a microfilter of 0.22 microns or autoclaving. Results showed that compost extract lost its activity after heating or filtration, confirming that chemical factors in compost had no direct inhibiting effect on the pathogen. The suppressiveness of composts was mainly due to their biotic component. Series of greenhouse trials showed that black scurf and stem canker incidence and severity were significantly reduced in peat–sand amended with compost compared with the untreated control. However, the potential suppressive effect of cattle manure and date palm compost (CMC) was higher than sheep manure and date palm compost (SMC). On potato seed tubers pre‐inoculated with the selected fungal isolates from compost, there was variability in the reduction of disease severity among treatments. Plant growth was unaffected by the application of fungal antagonists or by CMC amendment; however, an increase in the total yield was observed by the SMC potting mix compared with untreated control.     

Growth Kinetics of Microbacterium lacticum and Nitrate-Dependent Degradation of Ethylbenzene under Anaerobic Conditions

A pure strain of Microbacterium lacticum DJ-1 capable of anaer-obic biodegradation of ethylbenzene was isolated from soil contaminated with gasoline. Growth of the strain and biodegradation of ethylbenzene in batch cultures led to stoichiometric reduction of nitrate. M. lacticum DJ-1 could degrade 100 mg L^?1 of ethylbenzene completely, with a maximum degradation rate of 15.02 ± 1.14 mg L^?1 day^?1. Increasing the initial concentration of ethy-lbenzene resulted in decreased degradative ability. The cell-specific growth rates on ethylbenzene conformed to the Haldane–Andrew model in the substrate level range of 10–150 mg L^?1. Kinetic parameters were determined by nonlinear regression on specific growth rates and various initial substrate concentrat-ions, and the values of the maximum specific growth rate, half saturation constant, and inhibition constant were 0.71 day^?1, 34.3 mg L^?1, and 183.5 mg L^?1, respectively. This is the first report of ethylbenzene biodegradation by a bacterium of Microbacterium lacticum under nitrate-reducing conditions.     

Fate of bacterial pathogens in cattle dung slurry subjected to anaerobic digestion

The survival of certain pathogenic bacteria was studied in anaerobic batch digesters at room temperature (18–25 °C) as well as at 35 °C under laboratory conditions. The survival of Escherichia coli and Salmonella typhi at room temperature was upto 20 days whereas at 35 °C it was only upto 10 days. Shigella dysenteriae was found to be the most sensitive organism which could survive upto 10 days at room temperature and upto 5 days at 35 °C. The longest survival was observed in case of Streptococcus faecalis which could survive upto 35 days at room temperature and 15 days at 35 °C. The survival time of Salmonella typhi increased when the solid contents of the digester were elevated from 9% to 15%.     

厌氧菌群SVY42产酶条件分析及产木聚糖酶菌株的分离鉴定

以美国内华达州大盆地温泉采集样品为材料,富集获得纤维素及半纤维素高效稳定降解厌氧菌群SVY42,以巨菌草、甘蔗渣、废菇筒、羧甲基纤维素钠、滤纸、木聚糖为碳源,分析菌群SVY42产内切葡聚糖酶(CMC酶)、β-葡萄糖苷酶和木聚糖酶的情况。在此基础上,以木聚糖为底物筛选高产木聚糖酶的菌株。菌群SVY42在以巨菌草作为碳源时的β-葡萄糖苷酶活最高为0.23 U/mL,以木聚糖作为碳源时CMC酶活和木聚糖酶活均为最高,分别为0.31 U/mL和0.35 U/mL。从菌群SVY42中筛选得到1株高产木聚糖酶厌氧菌株SVY42-1,该菌在最适温度41℃和pH 8.0条件下,其木聚糖酶活力为0.26 U/mL,对其进行16S rDNA序列系统进化分析,SVY42-1与已知菌株的最高同源性仅为93.81%,初步鉴定属于新属。