Net ecosystem carbon exchange and the greenhouse gas balance of tidal marshes along an estuarine salinity gradient

Tidal wetlands are productive ecosystems with the capacity to sequester large amounts of carbon (C), but we know relatively little about the impact of climate change on wetland C cycling in lower salinity (oligohaline and tidal freshwater) coastal marshes. In this study we assessed plant production, C cycling and sequestration, and microbial organic matter mineralization at tidal freshwater, oligohaline, and salt marsh sites along the salinity gradient in the Delaware River Estuary over four years. We measured aboveground plant biomass, carbon dioxide (CO₂) and methane (CH₄) exchange between the marsh and atmosphere, microbial sulfate reduction and methanogenesis in marsh soils, soil biogeochemistry, and C sequestration with radiodating of soils. A simple model was constructed to estimate monthly and annually integrated rates of gross ecosystem production (GEP), ecosystem respiration (ER) to carbon dioxide ( \( {\text{ER}}_{{{\text{CO}}_{2} }} \) ) or methane ( \( {\text{ER}}_{{{\text{CH}}_{4} }} \) ), net ecosystem production (NEP), the contribution of sulfate reduction and methanogenesis to ER, and the greenhouse gas (GHG) source or sink status of the wetland for 2 years (2007 and 2008). All three marsh types were highly productive but evidenced different patterns of C sequestration and GHG source/sink status. The contribution of sulfate reduction to total ER increased along the salinity gradient from tidal freshwater to salt marsh. The Spartina alterniflora dominated salt marsh was a C sink as indicated by both NEP (~140 g C m^?2 year^?1) and ²¹⁰Pb radiodating (336 g C m^?2 year^?1), a minor sink for atmospheric CH₄, and a GHG sink (~620 g CO_2-eq m^?2 year^?1). The tidal freshwater marsh was a source of CH₄ to the atmosphere (~22 g C–CH₄ m^?2 year^?1). There were large interannual differences in plant production and therefore C and GHG source/sink status at the tidal freshwater marsh, though ²¹⁰Pb radiodating indicated modest C accretion (110 g C m^?2 year^?1). The oligohaline marsh site experienced seasonal saltwater intrusion in the late summer and fall (up to 10 mS cm^?1) and the Zizania aquatica monoculture at this site responded with sharp declines in biomass and GEP in late summer. Salinity intrusion was also linked to large effluxes of CH₄ at the oligohaline site (>80 g C–CH₄ m^?2 year^?1), making this site a significant GHG source (>2,000 g CO_2-eq m^?2 year^?1). The oligohaline site did not accumulate C over the 2 year study period, though ²¹⁰Pb dating indicated long term C accumulation (250 g C m^?2 year^?1), suggesting seasonal salt-water intrusion can significantly alter C cycling and GHG exchange dynamics in tidal marsh ecosystems.     

The contribution of the deep chlorophyll maximum to primary production in a seasonally stratified shelf sea, the North Sea

Results from extensive cruises in the years 2000 and 2001 throughout distinct ecohydrodynamic regions of the central and southern North Sea are presented and used to generate estimates of gross primary production and new production. An undulating CTD fitted with a fluorometer was towed over a distance of 12,000 kms. Fluorescence data were used to determine the chlorophyll distribution and derive estimates of phytoplankton biomass. These results were combined with estimates of primary production (new and regenerated) from experiments from one cruise in order to estimate gross production for a greater geographical extent. Results from repeat inter-annual transects showed that the strength of the thermocline and the associated deep chlorophyll maximum were variable. However, when the primary production was integrated over the 15–40 m depth, the variability between years was low. While the depth and strength of the deep chlorophyll maximum varied across the region, a deep chlorophyll maximum (DCM) is a consistent and widespread feature of this region at around 30 m depth. In 2001 the calculated average primary production rate in summer for the whole area surveyed was 0.91 g C m^?2 day^?1. This daily production equates to ~130 g C m^?2 for the summer stratified period. In the offshore stratified regions around the Dogger Bank and Eastern Central North Sea primary production of 64 g C m^?2 associated with the deep chlorophyll maximum (15–40 m) accounted for 60 % of total primary production during the summer stratified period (after the spring bloom). Approximately 66 % of new production in these areas occurred in the DCM. This study shows the extent of the DCM in the North Sea and demonstrates its importance in sustaining primary production after the spring bloom.     

Heterotrophic soil respiration and soil carbon dynamics in the deciduous Hainich forest obtained by three approaches

Three different approaches were used to calculate heterotrophic soil respiration (Rh) and soil carbon dynamics in an old-growth deciduous forest in central Germany. A root and mycorrhiza exclosure experiment in the field separated auto- and heterotrophic soil respiration. It was compared to modeled heterotrophic respiration resulting from two different approaches: a modular component model of soil respiration calculated autotrophic and heterotrophic soil respiration with litter, climate and canopy photosynthesis as input variables. It was calibrated by independent soil respiration measurements in the field. A second model was calibrated by incubation of soil samples from different soil layers in the laboratory. In this case, the annual sum of Rh was calculated by an empirical model including response curves to temperature and a soil moisture. The three approaches showed good accordance during spring and summer and when the annual sums of Rh calculated by the two models were compared. Average Rh for the years 2002–2006 were 436 g C m^?2 year^?1 (field model) and 417 g C m^?2 year^?1 (lab-model), respectively. Differences between the approaches revealed specific limitations of each method. The average carbon balance of the Hainich forest soil was estimated to be between 1 and 35 g C m^?2 year^?1 depending on the model used and the averaging period. A comparison with nighttime data from eddy covariance (EC) showed that EC data were lower than modelled soil respiration in many situations. We conclude that better filter methods for EC nighttime data have to be developed.     

Cumulative ecological effects of a Neotropical reservoir cascade across multiple assemblages

Kettle holes are often abundant within agriculturally used moraine landscapes. They are highly enriched with nutrients and considered hotspots of carbon turnover. However, data on their primary productivity remain rare. We analysed two kettle holes typical to Germany with common aquatic plant communities during one year. We hypothesised that gross primary production (GPP) rates would be high compared to other temperate freshwater ecosystems, leading to high sediment deposition. Summer GPP rates (4.5–5.1 g C m^?2 day^?1) were higher than those of most temperate freshwater systems, but GPP rates were reduced by 90% in winter. Macrophytes dominated GPP from May to September with emergent macrophytes accounting for half of the GPP. Periphyton contributed to most of the system GPP throughout the rest of the year. Sediment deposition rates were high and correlated with GPP in one kettle hole. In contrast, due to prolonged periods of anoxia, aerobic sediment mineralisation was low while sediment phosphorus release was significant. Our results suggest that kettle holes have a high potential for carbon burial, provided they do not fully dry up during warm years. Due to their unique features, they should not be automatically grouped with ponds and shallow lakes in global carbon budget estimates.     

Carbon cycling and sequestration in a Japanese red pine (Pinus densiflora) forest on lava flow of Mt. Fuji

Biometric-based carbon flux measurements were conducted in a pine forest on lava flow of Mt. Fuji, Japan, in order to estimate carbon cycling and sequestration. The forest consists mainly of Japanese red pine (Pinus densiflora) in a canopy layer and Japanese holly (Ilex pedunculosa) in a subtree layer. The lava remains exposed on the ground surface, and the soil on the lava flow is still immature with no mineral soil layer. The results showed that the net primary production (NPP) of the forest was 7.3 ± 0.7 t C ha^?1 year^?1, of which 1.4 ± 0.4 t C ha^?1 year^?1 was partitioned to biomass increment, 3.2 ± 0.5 t C ha^?1 year^?1 to above-ground fine litter production, 1.9 t C ha^?1 year^?1 to fine root production, and 0.8 ± 0.2 t C ha^?1 year^?1 to coarse woody debris. The total amount of annual soil surface CO₂ efflux was estimated as 6.1 ± 2.9 t C ha^?1 year^?1, using a closed chamber method. The estimated decomposition rate of soil organic matter, which subtracted annual root respiration from soil respiration, was 4.2 ± 3.1 t C ha^?1 year^?1. Biometric-based net ecosystem production (NEP) in the pine forest was estimated at 2.9 ± 3.2 t C ha^?1 year^?1, with high uncertainty due mainly to the model estimation error of annual soil respiration and root respiration. The sequestered carbon being allocated in roughly equal amounts to living biomass (1.4 t C ha^?1 year^?1) and the non-living C pool (1.5 t C ha^?1 year^?1). Our estimate of biometric-based NEP was 25 % lower than the eddy covariance-based NEP in this pine forest, due partly to the underestimation of NPP and difficulty of estimation of soil and root respiration in the pine forest on lava flows that have large heterogeneity of soil depth. However, our results indicate that the mature pine forest acted as a significant carbon sink even when established on lava flow with low nutrient content in immature soils, and that sequestration strength, both in biomass and in soil organic matter, is large.     

Instantaneous-to-daily GPP upscaling schemes based on a coupled photosynthesis-stomatal conductance model: correcting the overestimation of GPP by directly using daily average meteorological inputs

Daily canopy photosynthesis is usually temporally upscaled from instantaneous (i.e., seconds) photosynthesis rate. The nonlinear response of photosynthesis to meteorological variables makes the temporal scaling a significant challenge. In this study, two temporal upscaling schemes of daily photosynthesis, the integrated daily model (IDM) and the segmented daily model (SDM), are presented by considering the diurnal variations of meteorological variables based on a coupled photosynthesis-stomatal conductance model. The two models, as well as a simple average daily model (SADM) with daily average meteorological inputs, were validated using the tower-derived gross primary production (GPP) to assess their abilities in simulating daily photosynthesis. The results showed IDM closely followed the seasonal trend of the tower-derived GPP with an average RMSE of 1.63 g C m^?2 day^?1, and an average Nash–Sutcliffe model efficiency coefficient (E) of 0.87. SDM performed similarly to IDM in GPP simulation but decreased the computation time by >66 %. SADM overestimated daily GPP by about 15 % during the growing season compared to IDM. Both IDM and SDM greatly decreased the overestimation by SADM, and improved the simulation of daily GPP by reducing the RMSE by 34 and 30 %, respectively. The results indicated that IDM and SDM are useful temporal upscaling approaches, and both are superior to SADM in daily GPP simulation because they take into account the diurnally varying responses of photosynthesis to meteorological variables. SDM is computationally more efficient, and therefore more suitable for long-term and large-scale GPP simulations.     

Role of coarse woody debris in the carbon cycle of Takayama forest,central Japan

Coarse woody debris (CWD) is an important component of the forest carbon cycle, acting as a carbon pool and a source of CO₂ in temperate forest ecosystems. We used a soda-lime closed-chamber method to measure CO₂ efflux from downed CWD (diameter ≥5 cm) and to examine CWD respiration (R _CWD) under field conditions over 1 year in a temperate secondary pioneer forest in Takayama forest. We also investigated tree mortality (input to the CWD pool) from the data obtained from the annual tree census, which commenced in 2000. We developed an exponential function of temperature to predict R _CWD in each decay class (R ² = 0.81–0.97). The sensitivity of R _CWD to changing temperature, expressed as Q ₁₀, ranged from 2.12 to 2.92 and was relatively high in decay class III. Annual C flux from CWD (F _CWD) was extrapolated using continuous air temperature measurements and CWD necromass pools in the three decay classes. F _CWD was 3.0 (class I), 17.8 (class II), and 13.7 g C m^?2 year^?1 (class III) and totaled 34 g C m^?2 year^?1 in 2009. Annual input to CWD averaged 77 g C m^?2 year^?1 from 2000 to 2009. The budget of the CWD pool in the Takayama forest, including tree mortality inputs and respiratory outputs, was 0.43 Mg C ha^?1 year^?1 (net C sink) owing to high tree mortality in the mature pioneer forest. The potential CWD sink is important for the carbon cycle in temperate successional forests.     

Gross primary productivity of phytoplankton and planktonic respiration in inland floodplain wetlands of southeast Australia: habitat-dependent patterns and regulating processes

Gross primary productivity (GPP) of phytoplankton and planktonic respiration (PR) (i.e., planktonic metabolism) are critical pathways for carbon transformation in many aquatic ecosystems. In inland floodplain wetlands with variable inundation regimes, quantitative measurements of GPP and PR are rare and their relationships with wetland environmental conditions are largely unknown. We measured PR and the GPP of phytoplankton using light and dark biological oxygen demand bottles in open waters of channel and non-channel floodplain habitats of inland floodplain wetlands of southeast Australia that had been inundated by environmental water. Overall, GPP varied from 3.7 to 405.5 mg C m^?3 h^?1 (mean ± standard error: 89.4 ± 9.2 mg C m^?3 h^?1, n = 81), PR from 1.5 to 251.6 mg C m^?3 h^?1 (43.2 ± 5.6 mg C m^?3 h^?1, n = 81), and GPP/PR from 0.2 to 15.6 (3.0 ± 0.3, n = 81). In terms of wetland environmental conditions, total nitrogen (TN) ranged from 682.0 to 14,700.0 mg m^?3 (mean ± standard error: 2,643.0 ± 241.6 mg m^?3, n = 81), total phosphorus (TP) from 48.0 to 1,405.0 mg m^?3 (316.8 ± 31.4 mg m^?3, n = 81), and dissolved organic carbon (DOC) from 1.9 to 46.3 g m^?3 (22.0 ± 1.6 g m^?3, n = 81). Using ordinary least-squares multiple regression analyses, the rates of GPP and PR, and their ratio (GPP/PR) were modeled as a function of TN, TP, and DOC that had been measured concomitantly. The “best” models predicted GPP and GPP/PR ratio in channel habitats as a function of DOC; and GPP, PR, and GPP/PR in non-channel floodplain habitats as a function of TN and/or TP. The models explained between 46 and 74 % of the variance in channel habitats and between 17 and 87 % of the variance in non-channel floodplain habitats. Net autotrophy (mean GPP/PR 3.0) of planktonic metabolism in our work supports the prevailing view that wetlands are a net sink for carbon dioxide. We propose a nutrient-DOC framework, combined with hydrological and geomorphological delineations, to better predict and understand the planktonic metabolism in inland floodplain wetlands.     

Evolution of carbon fluxes during initial soil formation along the forefield of Damma glacier, Switzerland

Soil carbon (C) fluxes, soil respiration and dissolved organic carbon (DOC) leaching were explored along the young Damma glacier forefield chronosequence (7–128 years) over a three-year period. To gain insight into the sources of soil CO₂ effluxes, radiocarbon signatures of respired CO₂ were measured and a vegetation-clipping experiment was performed. Our results showed a clear increase in soil CO₂ effluxes with increasing site age from 9 ± 1 to 160 ± 67 g CO₂–C m^?2 year^?1, which was linked to soil C accumulation and development of vegetation cover. Seasonal variations of soil respiration were mainly driven by temperature; between 62 and 70 % of annual CO₂ effluxes were respired during the 4-month long summer season. Sources of soil CO₂ effluxes changed along the glacier forefield. For most recently deglaciated sites, radiocarbon-based age estimates indicated ancient C to be the dominant source of soil-respired CO₂. At intermediate site age (58–78 years), the contribution of new plant-fixed C via rhizosphere respiration amounted up to 90 %, while with further soil formation, heterotrophically respired C probably from accumulated ‘older’ soil organic carbon (SOC) became increasingly important. In comparison with soil respiration, DOC leaching at 10 cm depth was small, but increased similarly from 0.4 ± 0.02 to 7.4 ± 1.6 g DOC m^?2 year^?1 over the chronosequence. A strong rise of the ratio of SOC to secondary iron and aluminium oxides strongly suggests that increasing DOC leaching with site age results from a faster increase of the DOC source, SOC, than of the DOC sink, reactive mineral surfaces. Overall, C losses from soil by soil respiration and DOC leaching increased from 9 ± 1 to 70 ± 17 and further to 168 ± 68 g C m^?2 year^?1 at the <10, 58–78, and 110–128 year old sites. By comparison, total ecosystem C stocks increased from 0.2 to 1.1 and to 3.1 kg C m^?2 from the young to intermediate and old sites. Therefore, the ecosystem evolved from a dominance of C accumulation in the initial phase to a high throughput system. We suggest that the relatively strong increase in soil C stocks compared to C fluxes is a characteristic feature of initial soil formation on freshly exposed rocks.     

Carbon allocation in a Bornean tropical rainforest without dry seasons

To clarify characteristics of carbon (C) allocation in a Bornean tropical rainforest without dry seasons, gross primary production (GPP) and C allocation, i.e., above-ground net primary production (ANPP), aboveground plant respiration (APR), and total below-ground carbon flux (TBCF) for the forest were examined and compared with those from Amazonian tropical rainforests with dry seasons. GPP (30.61 MgC ha^?1 year^?1, eddy covariance measurements; 34.40 MgC ha^?1 year^?1, biometric measurements) was comparable to those for Amazonian rainforests. ANPP (6.76 MgC ha^?1 year^?1) was comparable to, and APR (8.01 MgC ha^?1 year^?1) was slightly lower than, their respective values for Amazonian rainforests, even though aboveground biomass was greater at our site. TBCF (19.63 MgC ha^?1 year^?1) was higher than those for Amazonian forests. The comparable ANPP and higher TBCF were unexpected, since higher water availability would suggest less fine root competition for water, giving higher ANPP and lower TBCF to GPP. Low nutrient availability may explain the comparable ANPP and higher TBCF. These data show that there are variations in C allocation patterns among mature tropical rainforests, and the variations cannot be explained solely by differences in soil water availability.     

Interannual variations in GPP in forest ecosystems in Southwest China and regional differences in the climatic contributions

Forest ecosystem plays an important role as carbon sinks in Southwest China. Currently, remote sensing technology has been widely used to substantially model the high temporal and spatial variation in gross primary production (GPP) at a site or regional scale. However, during the growing season, the regional uncertainty of GPP in the forest ecosystem and the relative contributions of climate variations to interannual variation (IAV) of GPP are not well understood across Southwest China. Our research focuses on the joint analysis of the three-cornered hat (TCH) algorithm and uses the contribution index to analyse the model's uncertainties varying with plant functional types (PFTs), climate zones, and the contribution of climate variabilities to GPP IAV. Here, three GPP datasets are used to investigate how climate variabilities contribute to the GPP IAV during the growing season. The uncertainties in GPP vary from 829.33 g C m⁻² year⁻¹ to 2031.86 g C m⁻² year⁻¹ for different models in different climate zones and different PFTs. Additionally, the results highlight that precipitation dominates the interannual variation in GPP in forest ecosystem during the growing season in Southwest China. It makes the largest contribution (34.46%) to the IAV of GPP in the climate zone of E (cold subtropical highland area) and the largest contribution (80.83%) to PFTs of the MF (mixed forest). Our study suggests the availability and applicability of GPP products can be used to assess GPP uncertainties and analyse the contributions of climate factors to GPP IAV in forest ecosystem or other ecosystems.     

Will CO<Subscript>2</Subscript> Emissions from Drained Tropical Peatlands Decline Over Time? Links Between Soil Organic Matter Quality,Nutrients, and C Mineralization Rates

Conversion, drainage, and cultivation of tropical peatlands can change soil conditions, shifting the C balance of these systems, which is important for the global C cycle. We examined the effect of soil organic matter (SOM) quality and nutrients on CO₂ production from peat decomposition using laboratory incubations of Indonesian peat soils from undrained forest in Kalimantan and drained oil palm plantations in Kalimantan and Sumatra. We found that oil palm soils had higher C/N and lower SOM quality than forest soils. Higher substrate quality and nutrient availability, particularly lower ratios of aromatic/aliphatic carbon and C/N, rather than total SOM or carbon, explained the higher rate of CO₂ production by forest soils (10.80 ± 0.23 µg CO₂–C g C h^?1) compared to oil palm soils (5.34 ± 0.26 µg CO₂–C g C h^?1) from Kalimantan. These factors also explained lower rates in Sumatran oil palm (3.90 ± 0.25 µg CO₂–C g C h^?1). We amended peat with nitrogen (N), phosphorus (P), and glucose to further investigate observed substrate and nutrient constraints across the range of observed peat quality. Available N limited CO₂ production, in unamended and amended soils. P addition raised CO₂ production when substrate quality was high and initial P state was low. Glucose addition raised CO₂ production in the presence of added N and P. Our results suggest that decline in SOM quality and nutrients associated with conversion may decrease substrate-driven rates of CO₂ production from peat decomposition over time.     

Estimation of the ecosystem carbon budget in South Korea between 1999 and 2008

A carbon flux model, the vegetation integrated simulator for trace gases, was employed to estimate the carbon budgets of vegetation ecosystems in South Korea. The geographic information system was used to prepare the input variables for the model, such as climate, soil, and land-cover data, from reliable national inventories. Model simulation results indicated that the annual average gross primary production, net primary production, and soil respiration (SR) for 10 years were 91.89, 40.16, and 62.91 Tg C year^?1, respectively. The model also estimated a net ecosystem production with a value of 3.51 Tg C year^?1 between 1999 and 2008. Such results indicate that the vegetation ecosystems of South Korea offset 3.3 % of anthropogenic emissions as a net carbon sink. Latitudinal and topographical gradients over the total simulation area were found for all estimates. In addition, the estimates varied between seasons and years, especially in estimates for biomass growth and carbon uptake, because of variations in the weather conditions. Finally, model validation was conducted using measured soil efflux and flux measurement data from the Gwangneung experimental forest (GEF). The estimated SR accounted for 81.6 % of the observed SR at the GEF site (P < 0.005). Further, the model accounted well for the observed phase and amplitude of changes in the summer and autumn seasons.     

Gross Primary Productivity of a High Elevation Tropical Montane Cloud Forest

For decades, the productivity of tropical montane cloud forests (TMCF) has been assumed to be lower than in tropical lowland forests due to nutrient limitation, lower temperatures, and frequent cloud immersion, although actual estimates of gross primary productivity (GPP) are very scarce. Here, we present the results of a process-based modeling estimate of GPP, using a soil–plant–atmosphere model, of a high elevation Peruvian TMCF. The model was parameterized with field-measured physiological and structural vegetation variables, and driven with meteorological data from the site. Modeled transpiration corroborated well with measured sap flow, and simulated GPP added up to 16.2 ± SE 1.6 Mg C ha^?1 y^?1. Dry season GPP was significantly lower than wet season GPP, although this difference was 17% and not caused by drought stress. The strongest environmental controls on simulated GPP were variation of photosynthetic active radiation and air temperature (T _air). Their relative importance likely varies with elevation and the local prevalence of cloud cover. Photosynthetic parameters (V _cmax and J _max) and leaf area index were the most important non-environmental controls on GPP. We additionally compared the modeled results with a recent estimate of GPP of the same Peruvian TMCF derived by the summing of ecosystem respiration and net productivity terms, which added up to 26 Mg C ha^?1 y^?1. Despite the uncertainties in modeling GPP we conclude that at this altitude GPP is, conservatively estimated, 30–40% lower than in lowland rainforest and this difference is driven mostly by cooler temperatures than changes in other parameters.     

Vertical distribution, biomass, production and turnover of fine roots along a topographical gradient in a sandy shrubland

In an artificial Salix gordejevii Chang et Skv. plantation of the Horqin sandy land, we investigated vertical distribution (in 0–100 cm depth), biomass (FRD), fine root production (FRP), fine root length density (FRLD) and turnover of fine roots (<2 mm diameter) at three sites (dune top, midslope and bottom of dune) along leeward slopes. Meanwhile, the correlation between FRP and soil available resources was analyzed. Our results indicate that more than 65% of total fine root biomass is distributed in 0–40 cm depth, and the patterns are different at three sites. The mean monthly FRD ranges from 227 to 324 g·m^?2, and they follows the order: dune top > midslope > bottom of dune. Ingrowth cores were harvested after 2, 3, 4, 5, 6 and 8 months of installation. At the first five sampling times, FRP and FRLD (0–40 cm) follows the same order with FRD along the topographical gradient, while FRP harvested after 8 months does not follow the same tendency, they are 348, 402 and 356 g·cm^?2 in dune top, midslope and bottom of dune, respectively. Fine root turnover ranges from 1.04–1.92 year^?1, and fine root turnover (20–40 cm) increases from dune top to bottom of dune along the topographical gradient. Correlation analysis between FRP and soil available resources indicates that only mean soil volumetric water content significantly correlates with annual FRP, which suggests that soil water content might be more crucial for shrub growth than fertility along the topographical gradient.     

Organic carbon burial in lake sediments in the middle and lower reaches of the Yangtze River Basin, China

Lakes are important in the global and regional carbon cycle, and lake sediments potentially store substantial quantities of organic carbon. The middle and lower reaches of the Yangtze River basin (MLYB) are some of the largest agricultural areas in China with an extremely high density of lakes and rivers. The lakes in the region have undergone dramatic changes over the past several decades. In this study, six cores from five lakes (the macrophyte-dominated: Shijiuhu Lake and Honghu Lake; the algae-dominated: Chaohu Lake, Taihu Lake, and Nanyihu Lake) in the MLYB were collected from 2002 A.D. to 2008 A.D. Mass accumulation rates (MARs) of sediment derived from ²¹⁰Pb and ¹³⁷Cs along with total organic carbon content (TOC) were used to determine organic carbon accumulation rates (OC ARs) over the last 100 years. The TOC in the five lakes exhibited a significant increase since the mid or late 20th century, which was consistent with the increase in the lake water trophic status due to nutrient input. The average organic carbon accumulation rates for the Taihu Lake, Nanyihu Lake, Chaohu Lake, Shijiuhu Lake, and Honghu Lake were calculated to be 16.6, 28.9, 9.8, 25.4, and 113.2 g C m^?2 year^?1, respectively, over the past 100 years. Based on the average OC AR of 32.1 g C m^?2 year^?1 from the five lakes, carbon burial in lake sediments may be as much as 6.8 × 10¹³ g C in the MLYB over the past 100 years.     

Vegetation clumping modulates global photosynthesis through adjusting canopy light environment

The spatial dispersion of photoelements within a vegetation canopy, quantified by the clumping index (CI), directly regulates the within-canopy light environment and photosynthesis rate, but is not commonly implemented in terrestrial biosphere models to estimate the ecosystem carbon cycle. A few global CI products have been developed recently with remote sensing measurements, making it possible to examine the global impacts of CI. This study deployed CI in the radiative transfer scheme of the Community Land Model version 5 (CLM5) and used the revised CLM5 to quantitatively evaluate the extent to which CI can affect canopy absorbed radiation and gross primary production (GPP), and for the first time, considering the uncertainty and seasonal variation of CI with multiple remote sensing products. Compared to the results without considering the CI impact, the revised CLM5 estimated that sunlit canopy absorbed up to 9%–15% and 23%–34% less direct and diffuse radiation, respectively, while shaded canopy absorbed 3%–18% more diffuse radiation across different biome types. The CI impacts on canopy light conditions included changes in canopy light absorption, and sunlit–shaded leaf area fraction related to nitrogen distribution and thus the maximum rate of Rubisco carboxylase activity (V_cmax), which together decreased photosynthesis in sunlit canopy by 5.9–7.2 PgC year⁻¹ while enhanced photosynthesis by 6.9–8.2 PgC year⁻¹ in shaded canopy. With higher light use efficiency of shaded leaves, shaded canopy increased photosynthesis compensated and exceeded the lost photosynthesis in sunlit canopy, resulting in 1.0 ± 0.12 PgC year⁻¹ net increase in GPP. The uncertainty of GPP due to the different input CI datasets was much larger than that caused by CI seasonal variations, and was up to 50% of the magnitude of GPP interannual variations in the tropical regions. This study highlights the necessity of considering the impacts of CI and its uncertainty in terrestrial biosphere models.     

Budget of methane emissions from soils, livestock and the river network at the regional scale of the Seine basin (France)

We used various approaches to establish a comprehensive budget of methane (CH₄) emissions from the Seine basin, including direct emissions from livestock and soils as well as emissions from the drainage network. For the direct emissions from livestock, we used official livestock census numbers and emission factors (CH₄ emitted by each animal species per head per year) available in the literature. For the emissions from soils, we based our estimates on experimental measurements in closed chambers installed on different agricultural plots, forest, and grasslands in 2008 and 2009. The results were extrapolated to the whole Seine basin, including grassland, cropland, and forest soil distributions in the Seine basin. The CH₄ emissions from the Seine drainage network were also based on measurements of sampled waters in various rivers and streams (from headwaters to estuary) during different seasons in 2007, 2008, and 2010. After chemical analysis of CH₄ concentrations in the water samples using a gas chromatographic technique and calculation of the CH₄ supersaturation by stream order in rivers of the Seine basin (from 1 to 8) and by season we could estimate the CH₄ emissions for the whole water surface area of the Seine drainage network. The livestock of the Seine basin produce CH₄ emissions amounting to 166 × 10⁶ kg C year^?1, among which cattle are responsible for 85 %. The total CH₄ emission from the Seine drainage network was estimated at 0.3 × 10⁶ kg C year^?1, large rivers being responsible for the largest proportion. Ebullition could account for an additional 0.2 × 10⁶ kg C year^?1. Soils of the Seine basin are a net sink for CH₄ (9.4 × 10⁶ kg C year^?1). The water and soils fluxes are low with regard to emissions by livestock, but domestic waste, through landfills, could contribute an additional 40 × 10⁶ kg C year^?1.     

Primary production of aquatic macrophytes and their epiphytes in two shallow lakes (Peipsi and Võrtsjärv) in Estonia

In shallow lakes with large littoral zones, epiphytes and submerged macrophytes can make an important contribution to the total annual primary production. We investigated the primary production (PP) of phytoplankton, submerged macrophytes, and their epiphytes, from June to August 2005, in two large shallow lakes. The production of pelagic and littoral phytoplankton and of the dominant submerged macrophytes in the littoral zone (Potamogeton perfoliatus in Lake Peipsi and P. perfoliatus and Myriopyllum spicatum in Lake Võrtsjärv) and of their epiphytes was measured using a modified ¹⁴C method. The total PP of the submerged macrophyte area was similar in both lakes: 12.4 g C m^?2 day^?1 in Peipsi and 12.0 g C m^?2 day^?1 in Võrtsjärv. In Peipsi, 84.2% of this production was accounted for by macrophytes, while the shares of phytoplankton and epiphytes were low (15.6 and 0.16%, respectively). In Võrtsjärv, macrophytes contributed 58%, phytoplankton 41.9% and epiphytes 0.1% of the PP in the submerged macrophyte area. Epiphyte production in both lakes was very low in comparison with that of phytoplankton and macrophytes: 0.01, 5.04, and 6.97 g C m^?2 day^?1, respectively, in Võrtsjärv, and 0.02, 1.93, and 10.5 g C m^?2 day^?1, respectively, in Peipsi. The PP of the littoral area contributed 10% of the total summer PP of Lake Peipsi sensu stricto and 35.5% of the total summer PP of Lake Võrtsjärv.     

Multi-decadal Changes in Water Table Levels Alter Peatland Carbon Cycling

Globally, peatlands store a large quantity of soil carbon that can be subsequently modified by hydrologic alterations from land-use change and climate change. However, there are many uncertainties in predicting how carbon cycling and greenhouse gas emissions are altered by long-term changes in hydrology. Therefore, the goal of this study was to quantify how multi-decadal manipulations of water table (WT) levels affected carbon cycling (plant production and net ecosystem exchange from three eddy covariance towers) in a peatland complex modified by levee construction, which created a wetter area up-gradient of the levee (mean WT was 12.1 cm below the surface), a dry area below the levee (36.8 cm), and an adjacent reference site not affected by the levee (21.6 cm). We found that mean total plant production was greatest in the reference site (311.9 g C m^?2 y^?1), followed by the dry site (290.5 g C m^?2 y^?1), and lowest in the wet site (227.1 g C m^?2 y^?1). Net ecosystem exchange during the growing season was negative for all sites (sink), with the wet site having the greatest sink and the dry site having the lowest sink. Ecosystem respiration increased and CH₄ emissions decreased with a decreasing WT level. This research demonstrates that human alteration of peatland WT levels can have long-term (>50 years) consequences on peatland carbon cycling.