A genetic technique to identify the diet of cownose rays,Rhinoptera bonasus: analysis of shellfish prey items from North Carolina and Virginia

Cownose rays are implicated in the consumption of commercially important shellfish on the U.S. East Coast. We tested this assumption by developing a molecular technique for species identification from cownose ray gut contents. Digestive tracts sampled from 33 rays in Pamlico Sound, NC and Chesapeake Bay, VA contained pieces of partially-digested tissue, well-digested tissue, fluid, and minute shell fragments which made visual identification to the species level nearly impossible. We sequenced the cytochrome oxidase subunit I (COI) for seven locally acquired bivalve species, chosen for their commercial and ecological importance in NC and VA. Sequences were used to design species-specific primers for each bivalve species to amplify polymerase chain reaction (PCR) products. We designed primers such that PCR products were sufficiently different in size to be distinguishable from one another when resolved on an agarose gel, and multiplexing of several species in one reaction was possible. Digestive tract sample testing revealed that cownose rays in Chesapeake Bay ate stout tagelus and soft shell clams. There was no evidence of the rays in the study consuming commercially important oysters, hard clams, and bay scallops. Further sampling over an extended period of time and additional locations is required to confirm these results. Our diagnostic tests could easily be expanded to elucidate the impact of cownose ray predation on prey populations.     

Intertidal recruitment and feeding in relation to optimal utilization of nursery areas by juvenile English sole (Parophrys vetulus: Pleuronectidae)

Synopsis Juvenile Parophrys vetulus 19–102 mm were collected on an intertidal flat in Humboldt Bay during 1976–1977. Recently metamorphosed fish that fed almost exclusively on harpacticoid copepods and other epibenthic crustaceans were found in large numbers during spring and early summer. A feeding transition occurred among fish 50–65 mm in length, and infaunal polychaetes were the dominant prey of fish greater than 65 mm. Increases in the feeding niche width and average size of prey items, as well as a decrease in the number of prey items per stomach, accompanied growth.The disappearance of English sole from intertidal areas in early fall at an average size of 82 mm and their subsequent residence in subtidal channels until a size of 140 mm suggest a size-depth segregation within the nursery ground. The advantages of such a distribution are discussed in terms of optimal foraging and reduction of intra- and interspecific competition.     

The Influence of Environmental Variables on the Distribution and Abundance of Three Elasmobranchs in Tomales Bay, California

We tested the hypothesis that temperature, salinity, and dissolved oxygen affect elasmobranch distribution and abundance in Tomales Bay, California, with monthly longline samples over a 20 month period. We used a Poisson regression under generalized least squares and found that temperature and salinity were the most important factors determining the distribution and abundance of the three most common elasmobranch species, bat ray, Myliobatis californica, leopard shark, Triakis semifasciata, and brown smoothhound shark, Mustelis henlei. Females of all three species were more abundant than males throughout the Bay, and were most abundant in the warmer, more saline inner bay. All three species apparently left Tomales Bay in late fall as water temperatures in the bay decreased to <10–12° C, and returned in early spring after temperatures increased to > 10° C. Three of 257 bat rays tagged in Tomales Bay were recaptured, all within 1km of their tagging location despite having been free for up to 583d.     

Effect of Temperature on Oxygen Consumption of the Leopard Shark, Triakis Semifasciata

The leopard shark, Triakis semifasciata, regularly resides in California's Tomales Bay, which is characterized by thermally different regions ranging from 10°C to 26°C during the summer. Past studies have shown that leopard sharks feed on benthic invertebrate prey similar to that of the sympatric bat ray, Myliobatis californica. Fishes' metabolic (oxygen consumption) rates typically increase with temperature increases, and we measured leopard sharks' metabolic responses and sensitivity to ambient temperature, using flow-through respirometry. Leopard shark oxygen consumption rate increased with increasing temperature, over a range of 12–24°C, with a typical temperature sensitivity (Q₁₀ = 2.51). Whereas bat rays use a highly temperature-sensitive metabolism to efficiently feed (in warmer waters) and digest (in cooler waters) during different phases of the diel cycle, leopard sharks possess a more typical metabolic temperature sensitivity that allows for high-tide foraging, throughout the diel cycle.     

Summer and fall movement of cownose ray, <Emphasis Type="Italic">Rhinoptera bonasus</Emphasis>, along the east coast of United States observed with pop-up satellite tags

Cownose ray, Rhinoptera bonasus, is a common elasmobranch species along the southeast United States coast that recently has received negative attention. These rays can consume considerable amounts of commercial shellfish raising concerns regarding their control and need for effective management. However, limited information is known regarding their population abundance and migration patterns. We addressed the latter by reviewing 25 tagged cownose rays in Chesapeake Bay with pop-up satellite archival tags (PSATs) to study their movement patterns during summer and fall and identify wintering grounds. Eleven tags provided useful data on temperature, depth, light level and/or end locations. The migration tracks were deciphered through geolocation based on light levels, sea surface temperatures and depth constraints. PSAT end locations indicated southern wintering grounds in the coastal waters of central Florida. Female rays migrated out of Chesapeake Bay at the end of September to early October and continued their southerly migration to Florida. Male rays exited the bay in July and migrated northward based on their estimated movement tracks. The male rays appeared to have a second summer feeding ground off the coast of southern New England. In the fall, males migrated south from New England to the same wintering grounds as the females. No diel differences in habitat use were detected; however, males tended to occupy a wider depth and temperature range compared to females. Information on the movement patterns and habitat use for cownose rays will assist in determining more effective recreational and commercial management plans.     

Occurrence,Growth and Food of Longheaded Eagle Ray, <Emphasis Type="Italic">Aetobatus flagellum</Emphasis>, in Ariake Sound,Kyushu, Japan

Synopsis The longheaded eagle ray, Aetobatus flagellum, has recently increased significantly in numbers in Ariake Sound. It is assumed that it feeds on bivalves and so, to prevent predation by eagle rays on bivalves, a ‘predator control program’ aimed at reducing the ray population has been in place since 2001. We examined their occurrence, age, growth and food in Ariake Sound to obtain data on the ecology of the eagle ray and provide basic information on their potential impact on bivalve stocks in Ariake Bay. The eagle ray is a seasonal visitor to Ariake Sound, increasing in numbers from April, and peaking during the summer. None were captured during surveys in December and February. Their movement pattern around the bay differed according to sex. Pregnant females were caught in the estuary during August and September. Females grew to a larger size than males and apparently lived longer. The maximum ages were 19 years for females and 9 years for males. Growth until two years was similar in both sexes, but after 2 years females grew larger. The eagle ray fed only on bivalves, especially Ruditapes philippinarum and Atrina pectinata, very important fishery species farmed in Ariake Bay.     

The effect of benthic prey abundance and size on red knot (Calidris canutus) distribution at an alternative migratory stopover site on the US Atlantic Coast

A population decline of the western Atlantic red knot (Calidris canutus rufa) has been linked to food limitation during the spring migratory stopover in Delaware Bay, USA. The stopover ecology at potential alternative sites has received little attention. We studied factors affecting red knot habitat selection and flock size at a coastal stopover site in Virginia in 2006–2007. The most common potential prey items were coquina clams (Donax variabilis) and crustaceans. Red knot foraging sites had more clams and crustaceans than unused sites in 2006. Prey abundance increased during the 2007 stopover period and remained high after the red knot peak. Red knot flock size in 2007 increased with mean clam shell length, and probability of flock presence decreased with increasing distance from night use locations. Our results suggest that red knots preferred coquina clams and that these clams were not depleted during the stopover period in 2007. Thus prey abundance did not appear to be a population-limiting factor at this coastal stopover site in Virginia in that year. Protection of coastal sites outside of Delaware Bay, many of which have been altered by human development, would likely benefit red knot population recovery, as they can apparently provide abundant food resources during at least some years.     

Directional and Non-directional Movements of Bat Rays, <Emphasis Type="BoldItalic">Myliobatis californica,</Emphasis> in Tomales Bay,California

Synopsis The goal of this project was to determine if bat rays, Myliobatis californica, display oriented movements and are thus a viable model species for the further study of geomagnetic topotaxis in elasmobranches. We tracked one male and three female rays during September 1998 and August and September 2001 in Tomales Bay, California. The rays exhibited two modes of travel: (1) rapid and highly directional movements in a straight line along the length of the bay and (2) slow and non-directional movements within small areas. Directional movements were defined as point-to-point vectors in the paths of the bat rays that were oriented in similar directions, and the distribution of these was clustered rather than dispersed and uniform. Mean rates of movement during directional swimming approached 0.5 m s⁻¹. In contrast, vectors in the path of bat rays were at times oriented in varying directions, and a distribution of these was widely dispersed as we would expect if the rays were moving randomly. These were defined as non-directional movements. Oriented straight-line swimming is consistent with the species either being able to orient to the bathymetry of the bay or possessing a compass and (or) piloting sense.     

Site-specific and density-dependent extinction of prey by schooling rays: generation of a population sink in top-quality habitat for bay scallops

Bay scallops (Argopecten irradians concentricus) are patchily distributed on two dominant spatial scales: (1) geographically restricted to highly saline marine lagoons, and (2) locally abundant within such lagoons only in relatively discrete beds of seagrass habitat. In the Cape Lookout lagoonal system of North Carolina, adult bay scallop abundance in the most densely occupied seagrass bed (Oscar Shoal) exhibits repeatable declines from up to 70 m^-2 to near zero in a 2- to 4-week period during late summer. This crash is completed before fall spawning can be initiated, thereby creating a population sink in what is the singly most productive patch of habitat. Field experiments conducted in the summers of 1996 and 1998 demonstrated that the seasonal extinction of bay scallops on Oscar Shoal can be prevented by the erection of 1-m² stockades, made of 50-cm-high vertical poles, spaced every 25 cm, which inhibit access by cownose rays. Because these stockades were porous to emigration and physical transport, and open to access by all other predators of adult scallops, predation by migrating cownose rays is the only viable explanation for the crash. Consequently, the natural predation process in this system achieves the reproductive extinction of prey in the habitat patch of highest productivity. Over 7 years of observation, the mortality rate in this patch increased with summer density, reaching the asymptote of 100% at 10 m^-2. The site-specific habitat selection by schools of rays may be based on prey density, which could render this example representative of a widespread generator of population sinks in habitat patches of high quality. The virtual extinction of scallops within Oscar Shoal despite nearby patches with relatively high density may be related to the highly efficient feeding behavior of schools and the high vulnerability of bay scallops in a context of multiple alternative prey types.     

Residence time and habitat use of coho salmon in Humboldt Bay, California: an acoustic telemetry study

We monitored the movement of coho salmon (Oncorhynchus kisutch) smolts with acoustic transmitters from freshwater, through the freshwater/estuary ecotone, through the estuary, and to ocean entry to determine residence time and habitat use in Humboldt Bay, California. Tagged fish were monitored with a fixed receiver network and mobile tracking conducted from a boat. Coho salmon observed during the two-year study resided in Humboldt Bay beginning at least as early as late April and resided through the beginning of July. Coho salmon smolts spent more time in the freshwater/estuary ecotone compared to the lower estuary and spent an average of 10–12 days migrating to Humboldt Bay. Coho salmon smolts resided in Humboldt Bay, a marine embayment, for an average of 15–22 days prior to leaving the bay for the open ocean. Coho salmon smolts, as observed from mobile tracking, used deep channels and channel margins more often than floating eelgrass mats, pilings, and docks. In addition, tagged fish were more often detected in the central portions of Humboldt Bay characterized by deep channels with narrow intertidal margins. There were fewer detections in other portions of the bay characterized by shallow channels with large intertidal mudflats and eelgrass meadows. Relatively short transmitter life (70 days) precluded determining the latest date of coho salmon smolt residency in Humboldt Bay. In addition, tag size limited use to the largest emigrating smolts and may not represent the behaviors of the smaller-sized smolts which were more abundant.     

The diet of the parti-coloured bat Vespertilio murinus in Sweden

Food habits of the parti-coloured bat in southern Sweden were investigated by analysis of fecal samples collected from three maternity roosts used in summer and, in addition, one roost used by a male during the mating season m autumn Small (c 3-10 mm) dipterans dominated all samples, representing 64-82% by volume, but larger flying insects like moths, caddis-flies and dung beetles were also eaten, together representing 14-33% At the family level, midges (Chironomidae) were by far the most common prey items, compnsing 12-67% of the diet The dominance of small prey items in the diet of the parti-coloured bat in Sweden contrasts with other bat species of similar size and foraging habits, but agrees with observations on parti-coloured bats in Ukrama and Poland     

Feeding habits of ocellate spot skate,Okamejei kenojei (Müller & Henle, 1841), in coastal waters of Taean,Korea

The feeding habits of Okamejei kenojei were studied using 592 specimens collected in the coastal waters of Taean, Korea from April 2008 to March 2009. O. kenojei is a bottom‐feeding carnivore that consumes mainly shrimp, fishes, and crabs. Its diet also includes small quantities of amphipods, mysids, cephalopods, euphausiids, copepods, isopods, and polychaetes. The total length (TL) of individuals in this study ranged from 8.2 to 49.0 cm. Cluster analysis based on %IRI (index of relative importance) identified three size classes. Group A (< 20 cm TL) ate primarily caridean shrimp and amphipods; group B (20–30 cm TL) ate exclusively shrimp; and group C (> 30 cm TL) ate penaeoidean shrimp, fishes, and crabs. O. kenojei showed ontogenetic changes in feeding habits. Although shrimps were the primary food consumed by all size groups, the proportion of shrimp in the total diet decreased and the consumption of fishes and crabs gradually increased with the body size of O. kenojei. Size of the prey organisms also increased. Smaller individuals fed mainly on small prey, such as amphipods, mysids, and small shrimp, whereas larger individuals preferred larger prey, such as larger shrimp, fishes, and crabs. The size‐related diet breadth and the percentage of empty stomachs were significant; the diet breadth gradually increased with body size, whereas the percentage of empty stomachs decreased. Seasonal changes in the O. kenojei diet were not significant, but shrimp constituted 97.3% of the summer diet by %IRI. Seasonal changes in diet breadth and the percentage of empty stomachs were not significant.     

Ontogenetic changes in the diet of the sandbar shark, <Emphasis Type="Italic">Carcharhinus plumbeus</Emphasis>, in lower Chesapeake Bay and Virginia (USA) coastal waters

This study describes the diet of the sandbar shark, Carcharhinus plumbeus, highlighting differences in diet within various regions of the Virginia (USA) nursery area, as well as ontogenetic changes in diet. Stomach samples were obtained in 2001 and 2002 from 232 sharks caught by gillnets or longlines. Historical data from the Virginia Institute of Marine Science (VIMS) Shark Ecology Program were also analyzed. Ontogenetic changes in diet were evident, with crustacean prey decreasing in frequency with increasing shark size, and elasmobranch prey importance increasing with increasing shark size. Whereas previous research in Chincoteague Bay, VA showed the blue crab, Callinectes sapidus, was the dominant crustacean in sandbar shark diet, the mantis shrimp, Squilla empusa, dominated the crustacean portion of the diet in this study. Differences in diet of sharks were observed among locations within the study area. Small juveniles (≤80 cm precaudal length) in the lower Chesapeake Bay ate more fishes, whereas Eastern Shore juveniles ate more crustaceans. Crustacean prey items varied among locations along the Eastern Shore, with more portunid crabs consumed in waters near Wachapreague and more mantis shrimp consumed near Sand Shoal Inlet. Our study showed that Carcharhinus plumbeus is a generalist predator and is thus unlikely to strongly impact the population of any particular prey species, and in turn is not likely to be strongly affected by fluctuations in abundance of a single prey species.     

Diel Movements of Bat Rays, Myliobatis californica, in Tomales Bay, California: Evidence for Behavioral Thermoregulation?

We used ultrasonic telemetry to examine movement patterns of 11 bat rays, Myliobatis californica, in Tomales Bay, California. Tomales Bay is long (20km) and narrow (1.4km), and is hydrographically separated into outer and inner bay regions. The outer bay (the outermost 8km) is characterized by oceanic conditions while the shallow inner bay (the innermost 12km) features wide seasonal temperature shifts. Five rays were tracked monthly from October 1990 to November 1991 and six rays (four of which carried temperature-sensing transmitters) were tracked daily from 30 June to 16 July 1992. Mean bat ray movement rate was 8.84mmin^–1 (range 4.49 to 13.40mmin^–1) and was not significantly affected by size (p=0.592), tidal stage (p=0.610), or time of day (p=0.327). Movement direction was unrelated to tidal stage (p=0.472) but showed a highly significant diel pattern (p<0.001). From 2:50–14:50h, rays moved toward the warmer and shallower inner bay, while from 14:50–2:50h they moved toward the cooler and deeper outer bay. These telemetry data, along with known bat ray foraging patterns and respiratory temperature-sensitivity, argue for behavioral thermoregulation as the primary influence on this movement pattern.     

LABORATORY DIGESTION OF PREY AND INTERPRETATION OF WALRUS STOMACH CONTENTS

A new approach for evaluating the potential biases of walrus ( Odobenus rosmarus ) diet data derived from stomach contents was examined based on the rates at which different prey types were digested. In this study controlled digestion experiments on polychaetes, echiurid and sipunculid worms, clams, snails, and crabs demonstrated that these prey items did not remain equally identifiable during digestion. Polychaetes, echiurids, and sipunculids were the least persistent prey. All worms became unidentifiable during the six-hour digestion trials. Over 50% of the clams maintained their diagnostic tissues ( i. e. , foot and/or siphon). Clam viscera did not survive hour 2. Snails and crustaceans were the most persistent prey. Without a consideration of the state of digestion, a stomach sample may not accurately reflect the species composition and size of prey consumed. Volume is not a reliable measure of a prey's relative importance, as the diagnostic fragments of invertebrate prey in a stomach vary greatly in physical composition. Walruses probably consume all of the soft tissues of clams, not solely the foot and siphon.     

Do sturgeon limit burrowing shrimp populations in Pacific Northwest Estuaries?

Green sturgeon, Acipenser medirostris, and white sturgeon, Acipenser transmontanus, are frequent inhabitants of coastal estuaries from northern California, USA to British Columbia, Canada. An analysis of stomach contents from 95 green sturgeon and six white sturgeon commercially landed in Willapa Bay, Grays Harbor, and the Columbia River estuary during 2000–2005 revealed that 17–97% had empty stomachs, but those fish with items in their guts fed predominantly on benthic prey items and fish. Burrowing thalassinid shrimp (mostly Neotrypaea californiensis) were important food items for both white and especially for green sturgeon taken in Willapa Bay, Washington during summer 2003, where they represented 51% of the biomass ingested (84.9% IRI). Small pits observed in intertidal areas dominated by these shrimp, are likely made by these sturgeon and we present evidence from exclusion studies and field observation that the predator making the pits can have a significant cumulative negative effect on burrowing shrimp density. These burrowing shrimp present a threat to the aquaculture industry in Washington State due to their ability to de-stabilize the substrate on which shellfish are grown. Despite an active burrowing shrimp control program in these estuaries, it seems unlikely that current burrowing shrimp abundance and availability as food is a limiting factor for threatened green sturgeon stocks. However, these large predators may have performed an important top down control function on shrimp populations in the past when they were more abundant.     

On the food of the European eel, Anguilla anguilla (L.), in the upper zone of the Tagus estuary, Portugal

The estuarine food habits of the European eel, Anguilla anguilla (L.), in the upper zone of the Tagus estuary have been studied through the analysis of 210 specimens collected during 1988. Eels, measuring from 136 to 627 mm in total length, fed on prey organisms ranging from 2.0 to 76.0 mm in length. Amphipods and the shore crab, Carcinus maenas (L.), were the most important food items found. In more saline muddy bottom areas polychaetes, bivalves and shrimp increased their importance as prey, replacing the amphipods as preferential food. Fish were always a secondary, although significant, prey item. The occurrence of seasonal variations in eels' diet could be attributed to fluctuations in prey densities. There was evidence of a close relationship between the quantity of prey organisms in the benthos and the composition of eels' stomach contents, but a certain degree of food selection based on size, concealment capacity and motility of prey, was found.     

WINTER FEEDING INTENSITY OF NARWHALS (MONODON MONOCEROS)

Stomach contents from 121 narwhals ( Monondon monoceros ) harvested in the eastern Canadian High Arctic and West Greenland were used to quantify seasonal changes in feeding activity and prey selection. Stomachs collected from summer harvests were mostly empty with little evidence of recent feeding. Stomachs collected in late fall and winter harvests had considerable amounts of undigested material with evidence of recent feeding. In summer, Arctic cod ( Arctogadus glacialis ), polar cod ( Boreogadus saida ), and Gonatus squid spp. constituted the narwhal diet. In fall, Gonatus fabricii was the only prey item observed. In late fall and winter, Greenland halibut ( Reinhardtius hippoglossoides ) and G. fabricii were the dominant prey items, observed in 51% and 73% of stomachs collected, respectively. Greenland halibut taken by narwhals were on average 39 cm (SD 8) and 556 g (306) and G. fabricii were on average 23 g (15) with mean mantle lengths of 85 mm (24). The low diversiry of prey species indicates narwhals have a restricted diet across all seasons. This study presents the first information on the winter diet of the narwhal and suggests Baffin Bay and Davis Strait are heavily utilized for feeding, in contrast to limited food intake during the summer period.     

三门湾海域冬夏季口足目和十足目虾类的种类组成、时空分布及多样性分析

根据2007年12月和2008年6月三门湾海域的2个航次的渔业资源调查资料,研究三门湾海域口足目与十足目中虾类在冬季和夏季的密度、优势种及多样性的时空分布,并结合该调查海区的地形地貌和水文等因素对虾类的分布进行分析.结果表明,三门湾海域虾类以广温、广盐种为主,其夏季种类数高于冬季,且夏季虾类质量和尾数密度均值亦高于冬季...